BLASTP 2.2.10 [Oct-19-2004]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1112623446-19688-128693678921.BLASTQ2

Query= gi|12230915|sp|P75958|LOLE_ECOLI Lipoprotein releasing
system transmembrane protein lolE
         (414 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples 
           2,419,489 sequences; 819,463,594 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs



Results of PSI-Blast iteration 3

Skip to the first new sequence

Taxonomy reports

Legend:
 - means that the alignment score was below the threshold on the previous iteration 
 - means that the alignment was checked on the previous iteration 


Hit list size 
Sequences with E-value BETTER than threshold

                                                                     Score    E
Sequences producing significant alignments:                          (bits) Value


 gi|53759518|ref|ZP_00172493.2|  COG4591: ABC-type transport syste...   334   4e-90 

 gi|53730437|ref|ZP_00348792.1|  COG4591: ABC-type transport syste...   331   2e-89 

 gi|16129081|ref|NP_415636.1|  putative kinase [Escherichia coli K...   331   3e-89 

 gi|9949086|gb|AAG06374.1|  conserved hypothetical protein [Pseudo...   329   9e-89 

 gi|48787803|ref|ZP_00283782.1|  COG4591: ABC-type transport syste...   329   1e-88 

 gi|24112523|ref|NP_707033.1|  putative kinase [Shigella flexneri ...   328   1e-88 

 gi|26247262|ref|NP_753302.1|  Lipoprotein releasing system transm...   328   1e-88 

 gi|28897753|ref|NP_797358.1|  hypothetical protein VP0979 [Vibrio...   328   3e-88 

 gi|12514668|gb|AAG55864.1|  putative kinase [Escherichia coli O15...   327   4e-88 

 gi|9656413|gb|AAF95030.1|  conserved hypothetical protein [Vibrio...   326   6e-88 

 gi|53719887|ref|YP_108873.1|  putative lipoprotein releasing syst...   326   8e-88 

 gi|9949088|gb|AAG06376.1|  conserved hypothetical protein [Pseudo...   325   2e-87 

 gi|50120755|ref|YP_049922.1|  lipoprotein releasing system transm...   324   3e-87 

 gi|46321384|ref|ZP_00221761.1|  COG4591: ABC-type transport syste...   324   3e-87 

 gi|46163958|ref|ZP_00136329.2|  COG4591: ABC-type transport syste...   324   4e-87 

 gi|17428130|emb|CAD14819.1|  PROBABLE LIPOPROTEIN RELEASING SYSTE...   323   5e-87 

 gi|46312127|ref|ZP_00212726.1|  COG4591: ABC-type transport syste...   323   5e-87 

 gi|34104273|gb|AAQ60632.1|  lipoprotein releasing system trasmemb...   321   3e-86 

 gi|28869314|ref|NP_791933.1|  lipoprotein releasing system transm...   319   1e-85 

 gi|39935992|ref|NP_948268.1|  possible ABC type permease; lipopro...   317   5e-85 

 gi|53756984|gb|AAU91275.1|  lipoprotein ABC transporter, permease...   316   7e-85 

 gi|28869312|ref|NP_791931.1|  lipoprotein releasing system transm...   316   8e-85 

 gi|45441568|ref|NP_993107.1|  lipoprotein releasing system, trans...   316   9e-85 

 gi|51596762|ref|YP_070953.1|  ABC tranporter/lipoprotein releasin...   316   9e-85 

 gi|59801184|ref|YP_207896.1|  LolC [Neisseria gonorrhoeae FA 1090...   315   1e-84 

 gi|54309555|ref|YP_130575.1|  putative ABC transporter, integral ...   315   2e-84 

 gi|46132427|ref|ZP_00170902.2|  COG4591: ABC-type transport syste...   315   2e-84 

 gi|7380062|emb|CAB84643.1|  putative integral membrane protein [N...   314   3e-84 

 gi|37526702|ref|NP_930046.1|  Lipoprotein releasing system transm...   314   3e-84 

 gi|53611016|ref|ZP_00342213.1|  COG4591: ABC-type transport syste...   314   4e-84 

 gi|23469022|ref|ZP_00124357.1|  COG4591: ABC-type transport syste...   313   5e-84 

 gi|56478739|ref|YP_160328.1|  hypothetical protein ebA5819 [Azoar...   313   5e-84 

 gi|26988878|ref|NP_744303.1|  lipoprotein releasing system, perme...   313   7e-84 

 gi|39997368|ref|NP_953319.1|  ABC transporter, permease protein [...   312   1e-83 

 gi|7226474|gb|AAF41616.1|  conserved hypothetical protein [Neisse...   312   1e-83 

 gi|50085711|ref|YP_047221.1|  transport protein of outer membrane...   312   1e-83 

 gi|46133408|ref|ZP_00203154.1|  COG4591: ABC-type transport syste...   311   2e-83 

 gi|16273448|ref|NP_439697.1|  hypothetical protein HI1548 [Haemop...   311   2e-83 

 gi|53611014|ref|ZP_00342211.1|  COG4591: ABC-type transport syste...   311   3e-83 

 gi|48770765|ref|ZP_00275108.1|  COG4591: ABC-type transport syste...   310   5e-83 

 gi|59713647|ref|YP_206422.1|  Lipoprotein releasing system transm...   310   6e-83 

 gi|23347634|gb|AAN29752.1|  ABC transporter, permease protein [Br...   310   6e-83 

 gi|56707553|ref|YP_169449.1|  lipoprotein releasing system, subun...   310   7e-83 

 gi|17983113|gb|AAL52320.1|  LIPOPROTEIN RELEASING SYSTEM TRANSMEM...   310   7e-83 

 gi|53729138|ref|ZP_00348325.1|  COG4591: ABC-type transport syste...   309   1e-82 

 gi|47573590|ref|ZP_00243628.1|  COG4591: ABC-type transport syste...   309   1e-82 

 gi|29142135|ref|NP_805477.1|  ABC transporter integral membrane s...   309   1e-82 

 gi|56413795|ref|YP_150870.1|  ABC transporter integral membrane s...   309   1e-82 

 gi|53732822|ref|ZP_00349581.1|  COG4591: ABC-type transport syste...   308   1e-82 

 gi|62127372|gb|AAX65075.1|  ABC transporter, integral membrane pr...   308   2e-82 

 gi|48845381|ref|ZP_00299663.1|  COG4591: ABC-type transport syste...   308   2e-82 

 gi|27379987|ref|NP_771516.1|  probable ABC transporter permease p...   308   3e-82 

 gi|26988880|ref|NP_744305.1|  lipoprotein releasing system, perme...   307   4e-82 

 gi|30249056|ref|NP_841126.1|  DUF214 [Nitrosomonas europaea ATCC ...   306   9e-82 

 gi|13471386|ref|NP_102952.1|  hypothetical protein mll1342 [Mesor...   306   1e-81 

 gi|15837678|ref|NP_298366.1|  hypothetical protein XF1076 [Xylell...   303   6e-81 

 gi|48730015|ref|ZP_00263764.1|  COG4591: ABC-type transport syste...   301   2e-80 

 gi|52007738|ref|ZP_00335115.1|  COG4591: ABC-type transport syste...   301   2e-80 

 gi|52853542|ref|ZP_00145774.2|  COG4591: ABC-type transport syste...   301   4e-80 

 gi|28198273|ref|NP_778587.1|  lipoprotein releasing system transm...   300   4e-80 

 gi|22996851|ref|ZP_00041094.1|  COG4591: ABC-type transport syste...   300   5e-80 

 gi|22995331|ref|ZP_00039809.1|  COG4591: ABC-type transport syste...   299   7e-80 

 gi|37680545|ref|NP_935154.1|  putative ABC transporter, integral ...   297   3e-79 

 gi|27361562|gb|AAO10470.1|  Conserved hypothetical protein [Vibri...   297   4e-79 

 gi|45915776|ref|ZP_00197222.1|  COG4591: ABC-type transport syste...   297   4e-79 

 gi|23012408|ref|ZP_00052501.1|  COG4591: ABC-type transport syste...   296   9e-79 

 gi|48832907|ref|ZP_00289933.1|  COG4591: ABC-type transport syste...   294   2e-78 

 gi|21231570|ref|NP_637487.1|  lipoprotein releasing system transm...   294   4e-78 

 gi|24373812|ref|NP_717855.1|  lipoprotein releasing system transm...   294   4e-78 

 gi|49474194|ref|YP_032236.1|  Lipoprotein releasing system transm...   293   6e-78 

 gi|16126173|ref|NP_420737.1|  hypothetical protein CC1930 [Caulob...   292   1e-77 

 gi|15074219|emb|CAC45866.1|  HYPOTHETICAL TRANSMEMBRANE PROTEIN [...   292   1e-77 

 gi|29654316|ref|NP_820008.1|  lipoprotein ABC transporter, permea...   291   2e-77 

 gi|15602427|ref|NP_245499.1|  hypothetical protein PM0562 [Pasteu...   291   2e-77 

 gi|54032009|ref|ZP_00364141.1|  COG4591: ABC-type transport syste...   291   3e-77 

 gi|17935189|ref|NP_531979.1|  ABC transporter, membrane spanning ...   291   3e-77 

 gi|46312832|ref|ZP_00213425.1|  COG4591: ABC-type transport syste...   291   3e-77 

 gi|49475641|ref|YP_033682.1|  Lipoprotein releasing system transm...   290   4e-77 

 gi|54295131|ref|YP_127546.1|  hypothetical protein lpl2211 [Legio...   290   4e-77 

 gi|58038567|ref|YP_190531.1|  Lipoprotein releasing system transm...   290   5e-77 

 gi|21108306|gb|AAM36938.1|  lipoprotein releasing system transmem...   290   6e-77 

 gi|54298182|ref|YP_124551.1|  hypothetical protein lpp2239 [Legio...   289   6e-77 

 gi|52425240|ref|YP_088377.1|  hypothetical protein MS1185 [Mannhe...   289   7e-77 

 gi|52842498|ref|YP_096297.1|  lipoprotein ABC transporter [Legion...   289   1e-76 

 gi|53732302|ref|ZP_00349453.1|  COG4591: ABC-type transport syste...   289   1e-76 

 gi|48764624|ref|ZP_00269175.1|  COG4591: ABC-type transport syste...   288   2e-76 

 gi|46189140|ref|ZP_00205925.1|  COG4591: ABC-type transport syste...   288   2e-76 

 gi|48730017|ref|ZP_00263766.1|  COG4591: ABC-type transport syste...   288   2e-76 

 gi|33592244|ref|NP_879888.1|  lipoprotein releasing system transm...   288   3e-76 

 gi|32030059|ref|ZP_00132979.1|  COG4591: ABC-type transport syste...   287   5e-76 

 gi|56460622|ref|YP_155903.1|  ABC-type transport system, involved...   286   7e-76 

 gi|15892999|ref|NP_360713.1|  hypothetical protein RC1076 [Ricket...   285   2e-75 

 gi|58581928|ref|YP_200944.1|  lipoprotein releasing system transm...   282   1e-74 

 gi|33601281|ref|NP_888841.1|  lipoprotein releasing system transm...   281   2e-74 

 gi|33596665|ref|NP_884308.1|  lipoprotein releasing system transm...   281   3e-74 

 gi|48862035|ref|ZP_00315933.1|  COG4591: ABC-type transport syste...   281   4e-74 

 gi|56677757|gb|AAV94423.1|  lipoprotein releasing system transmem...   279   7e-74 

 gi|28262692|gb|EAA26196.1|  unknown [Rickettsia sibirica 246] >gi...   279   9e-74 

 gi|51473878|ref|YP_067635.1|  hypothetical protein RT0694 [Ricket...   277   3e-73 

 gi|48849475|ref|ZP_00303718.1|  COG4591: ABC-type transport syste...   276   7e-73 

 gi|46580780|ref|YP_011588.1|  lipoprotein releasing system, perme...   276   8e-73 

 gi|54309557|ref|YP_130577.1|  putative ABC transporter integral m...   275   2e-72 

 gi|52699287|ref|ZP_00340695.1|  COG4591: ABC-type transport syste...   275   2e-72 

 gi|15604541|ref|NP_221059.1|  hypothetical protein RP699 [Rickett...   273   8e-72 

 gi|61100924|ref|ZP_00376381.1|  ABC-type transport system [Erythr...   273   1e-71 

 gi|33148230|gb|AAP95750.1|  lipoprotein releasing system transmem...   272   1e-71 

 gi|22959283|ref|ZP_00006937.1|  COG4591: ABC-type transport syste...   271   4e-71 

 gi|28897751|ref|NP_797356.1|  hypothetical protein VP0977 [Vibrio...   269   9e-71 

 gi|52008723|ref|ZP_00336092.1|  COG4591: ABC-type transport syste...   267   4e-70 

 gi|56542929|gb|AAV89083.1|  ABC-type transport system [Zymomonas ...   266   1e-69 

 gi|46204233|ref|ZP_00050294.2|  COG4591: ABC-type transport syste...   264   2e-69 

 gi|57238817|ref|YP_179953.1|  putative lipoprotein releasing syst...   264   3e-69 

 gi|58416418|emb|CAI27531.1|  Lipoprotein releasing system transme...   264   3e-69 

 gi|24373810|ref|NP_717853.1|  lipoprotein releasing system transm...   264   4e-69 

 gi|40063595|gb|AAR38384.1|  ABC transporter, permease protein [un...   261   2e-68 

 gi|48862033|ref|ZP_00315931.1|  COG4591: ABC-type transport syste...   260   7e-68 

 gi|59713645|ref|YP_206420.1|  lipoprotein releasing system transm...   259   1e-67 

 gi|4062688|dbj|BAA35936.1|  Hypothetical protein HI1555 [Escheric...   256   1e-66 

 gi|37680547|ref|NP_935156.1|  putative ABC transporter integral m...   256   1e-66 

 gi|51245480|ref|YP_065364.1|  similar to lipoprotein releasing sy...   254   5e-66 

 gi|26247260|ref|NP_753300.1|  Lipoprotein releasing system transm...   253   7e-66 

 gi|42521026|ref|NP_966941.1|  hypothetical protein WD1229 [Wolbac...   252   1e-65 

 gi|56460624|ref|YP_155905.1|  ABC-type transport system, involved...   252   2e-65 

 gi|56479828|ref|NP_707031.2|  hypothetical protein SF1120 [Shigel...   251   4e-65 

 gi|9656415|gb|AAF95032.1|  conserved hypothetical protein [Vibrio...   250   4e-65 

 gi|56413797|ref|YP_150872.1|  ABC transporter integral membrane s...   250   6e-65 

 gi|29142137|ref|NP_805479.1|  ABC transporter integral membrane s...   250   6e-65 

 gi|46308991|ref|ZP_00211183.1|  COG4591: ABC-type transport syste...   249   9e-65 

 gi|58584740|ref|YP_198313.1|  ABC-type transport system, involved...   249   1e-64 

 gi|39546312|ref|NP_460187.2|  integral membrane protein [Salmonel...   249   1e-64 

 gi|37526704|ref|NP_930048.1|  Lipoprotein releasing system transm...   245   2e-63 

 gi|15602425|ref|NP_245497.1|  hypothetical protein PM0560 [Pasteu...   244   3e-63 

 gi|20091320|ref|NP_617395.1|  hypothetical protein MA2489 [Methan...   240   8e-62 

 gi|50120753|ref|YP_049920.1|  lipoprotein releasing system transm...   238   3e-61 

 gi|48838239|ref|ZP_00295186.1|  COG4591: ABC-type transport syste...   237   3e-61 

 gi|56417192|ref|YP_154266.1|  hypothetical protein AM1183 [Anapla...   236   9e-61 

 gi|21226193|ref|NP_632115.1|  ABC transporter permease protein [M...   235   2e-60 

 gi|20092063|ref|NP_618138.1|  hypothetical protein MA3247 [Methan...   235   2e-60 

 gi|22125679|ref|NP_669102.1|  hypothetical protein y1785 [Yersini...   235   2e-60 

 gi|51596764|ref|YP_070955.1|  ABC transporter/lipoprotein releasi...   235   2e-60 

 gi|53732829|ref|ZP_00349585.1|  COG4591: ABC-type transport syste...   234   3e-60 

 gi|57242035|ref|ZP_00369975.1|  conserved hypothetical integral m...   234   3e-60 

 gi|42631611|ref|ZP_00157149.1|  COG4591: ABC-type transport syste...   234   5e-60 

 gi|16273455|ref|NP_439704.1|  hypothetical protein HI1555 [Haemop...   234   5e-60 

 gi|48867198|ref|ZP_00320783.1|  COG4591: ABC-type transport syste...   233   7e-60 

 gi|20090527|ref|NP_616602.1|  hypothetical protein MA1674 [Methan...   233   8e-60 

 gi|48838240|ref|ZP_00295187.1|  COG4591: ABC-type transport syste...   232   1e-59 

 gi|58696954|ref|ZP_00372446.1|  ABC transporter, permease protein...   228   2e-58 

 gi|27361560|gb|AAO10468.1|  Conserved hypothetical protein [Vibri...   227   4e-58 

 gi|23467309|ref|ZP_00122892.1|  COG4591: ABC-type transport syste...   227   6e-58 

 gi|52425242|ref|YP_088379.1|  hypothetical protein MS1187 [Mannhe...   226   1e-57 

 gi|21228952|ref|NP_634874.1|  ABC transporter, permease protein [...   225   2e-57 

 gi|32030057|ref|ZP_00132977.1|  COG4591: ABC-type transport syste...   225   2e-57 

 gi|57237769|ref|YP_179017.1|  permease, putative [Campylobacter j...   223   8e-57 

 gi|53729136|ref|ZP_00134109.2|  COG4591: ABC-type transport syste...   222   1e-56 

 gi|34557623|ref|NP_907438.1|  hypothetical protein WS1259 [Woline...   222   1e-56 

 gi|6968378|emb|CAB73198.1|  putative integral membrane protein [C...   221   3e-56 

 gi|59801781|ref|YP_208493.1|  putative ABC transporter, ATP-bindi...   221   3e-56 

 gi|15611791|ref|NP_223442.1|  hypothetical protein jhp0724 [Helic...   221   5e-56 

 gi|56385102|gb|AAV85982.1|  MacB [Neisseria gonorrhoeae]               221   5e-56 

 gi|7379451|emb|CAB84013.1|  putative ABC transporter ATP-binding ...   220   7e-56 

 gi|23475819|ref|ZP_00131093.1|  COG4591: ABC-type transport syste...   220   8e-56 

 gi|7225775|gb|AAF40978.1|  ABC transporter, ATP-binding protein [...   219   9e-56 

 gi|42522295|ref|NP_967675.1|  Macrolide specific ABC-type transpo...   219   1e-55 

 gi|20091321|ref|NP_617396.1|  hypothetical protein MA2490 [Methan...   218   2e-55 

 gi|53713160|ref|YP_099152.1|  ABC transporter permease protein [B...   218   2e-55 

 gi|24372410|ref|NP_716452.1|  ABC transporter, ATP-binding/permea...   218   3e-55 

 gi|46311285|ref|ZP_00211894.1|  COG0577: ABC-type antimicrobial p...   217   5e-55 

 gi|32261866|gb|AAP76915.1|  conserved hypothetical protein [Helic...   216   2e-54 

 gi|57240551|ref|ZP_00368500.1|  conserved hypothetical integral m...   214   4e-54 

 gi|2313911|gb|AAD07831.1|  conserved hypothetical integral membra...   214   4e-54 

 gi|45441566|ref|NP_993105.1|  lipoprotein releasing system, trans...   213   9e-54 

 gi|53715757|ref|YP_101749.1|  hypothetical protein BF4478 [Bacter...   212   1e-53 

 gi|23468969|ref|ZP_00124304.1|  COG0577: ABC-type antimicrobial p...   212   1e-53 

 gi|12513909|gb|AAG55261.1|  putative ATP-binding component of a t...   212   1e-53 

 gi|60280008|gb|AAX16350.1|  PA2390 [Pseudomonas aeruginosa]            212   1e-53 

 gi|60279990|gb|AAX16333.1|  PA2390 [Pseudomonas aeruginosa]            212   2e-53 

 gi|13360424|dbj|BAB34388.1|  putative ATP-binding component of a ...   212   2e-53 

 gi|60279959|gb|AAX16304.1|  PA2390 [Pseudomonas aeruginosa] >gi|3...   212   2e-53 

 gi|9948431|gb|AAG05778.1|  probable ATP-binding/permease fusion A...   212   2e-53 

 gi|21672564|ref|NP_660631.1|  hypothetical 45.3 kDa protein [Buch...   211   3e-53 

 gi|42522999|ref|NP_968379.1|  Lipoprotein releasing system transm...   211   3e-53 

 gi|28900079|ref|NP_799734.1|  putative ABC transporter, ATP-bindi...   211   3e-53 

 gi|16128847|ref|NP_415400.1|  macrolide transport protein (ABC su...   211   3e-53 

 gi|60495122|emb|CAH09943.1|  putative lipoprotein releasing syste...   211   4e-53 

 gi|28870017|ref|NP_792636.1|  macrolide ABC efflux protein MacB [...   211   4e-53 

 gi|29338522|gb|AAO76322.1|  ABC transporter, permease protein [Ba...   211   5e-53 

 gi|24112255|ref|NP_706765.1|  putative ATP-binding component of a...   210   6e-53 

 gi|45441056|ref|NP_992595.1|  putative ABC transporter ATP-bindin...   209   1e-52 

 gi|15669701|ref|NP_248514.1|  hypothetical protein MJ1507 [Methan...   209   1e-52 

 gi|51595731|ref|YP_069922.1|  putative ABC transporter with fused...   209   1e-52 

 gi|26990902|ref|NP_746327.1|  ABC export system, permease/ATP-bin...   209   1e-52 

 gi|2983943|gb|AAC07492.1|  hypothetical protein [Aquifex aeolicus...   207   3e-52 

 gi|19703916|ref|NP_603478.1|  Lipoprotein releasing system transm...   206   8e-52 

 gi|33148228|gb|AAP95748.1|  lipoprotein releasing system transmem...   206   1e-51 

 gi|51597040|ref|YP_071231.1|  ABC transporter(efflux), fused perm...   206   1e-51 

 gi|34762631|ref|ZP_00143624.1|  Lipoprotein releasing system tran...   205   1e-51 

 gi|53721660|ref|YP_110645.1|  macrolide-specific ABC-type efflux ...   205   2e-51 

 gi|29340150|gb|AAO77944.1|  conserved hypothetical protein [Bacte...   205   2e-51 

 gi|45358197|ref|NP_987754.1|  hypothetical protein MMP0634 [Metha...   205   2e-51 

 gi|34557766|ref|NP_907581.1|  PROBABLE TRANSMEMBRANE ATP-BINDING ...   205   2e-51 

 gi|48731879|ref|ZP_00265623.1|  COG0577: ABC-type antimicrobial p...   205   2e-51 

 gi|45442402|ref|NP_993941.1|  putative ABC transporter, ATP-bindi...   205   2e-51 

 gi|28869362|ref|NP_791981.1|  macrolide ABC efflux protein [Pseud...   204   3e-51 

 gi|16799311|ref|NP_469579.1|  hypothetical protein lin0234 [Liste...   204   5e-51 

 gi|24212973|ref|NP_710454.1|  Lipoprotein releasing system transm...   204   5e-51 

 gi|47573265|ref|ZP_00243304.1|  COG0577: ABC-type antimicrobial p...   204   6e-51 

 gi|45656137|ref|YP_000223.1|  lipoprotein releasing system transm...   203   7e-51 

 gi|34104014|gb|AAQ60374.1|  probable ABC transporter, ATP-binding...   202   1e-50 

 gi|30249852|ref|NP_841922.1|  DUF214 [Nitrosomonas europaea ATCC ...   202   1e-50 

 gi|53730882|ref|ZP_00348995.1|  COG0577: ABC-type antimicrobial p...   202   2e-50 

 gi|48731629|ref|ZP_00265373.1|  COG0577: ABC-type antimicrobial p...   202   2e-50 

 gi|16802241|ref|NP_463726.1|  hypothetical protein lmo0195 [Liste...   202   2e-50 

 gi|47096188|ref|ZP_00233787.1|  ABC transporter, permease protein...   202   2e-50 

 gi|46143385|ref|ZP_00135343.2|  COG0577: ABC-type antimicrobial p...   201   3e-50 

 gi|46140814|ref|ZP_00203756.1|  COG0577: ABC-type antimicrobial p...   201   3e-50 

 gi|56414005|ref|YP_151080.1|  conserved hypothetical ABC transpor...   201   3e-50 

 gi|29142412|ref|NP_805754.1|  conserved hypothetical ABC transpor...   201   4e-50 

 gi|15075093|emb|CAC46650.1|  PROBABLE TRANSMEMBRANE ATP-BINDING A...   200   5e-50 

 gi|37525538|ref|NP_928882.1|  Macrolide-specific ABC-type efflux ...   200   5e-50 

 gi|62127100|gb|AAX64803.1|  putative ABC superfamily (atp&memb) t...   200   6e-50 

 gi|16419454|gb|AAL19878.1|  putative ABC superfamily (atp&memb) t...   200   7e-50 

 gi|50086114|ref|YP_047624.1|  macrolide transport protein (ABC su...   200   8e-50 

 gi|50119829|ref|YP_048996.1|  macrolide-specific ABC-type efflux ...   200   9e-50 

 gi|53712880|ref|YP_098872.1|  ABC transporter permease protein [B...   199   1e-49 

 gi|30249074|ref|NP_841144.1|  probable ATP-binding/permease fusio...   197   4e-49 

 gi|46906427|ref|YP_012816.1|  ABC transporter, permease protein [...   197   4e-49 

 gi|20806779|ref|NP_621950.1|  ABC-type transport systems, involve...   197   6e-49 

 gi|60492532|emb|CAH07303.1|  putative transmembrane permease [Bac...   196   8e-49 

 gi|46198957|ref|YP_004624.1|  ABC transporter permease protein [T...   196   1e-48 

 gi|47530813|ref|YP_022162.1|  abc transporter, permease protein [...   196   1e-48 

 gi|52425184|ref|YP_088321.1|  hypothetical protein MS1129 [Mannhe...   195   1e-48 

 gi|48841130|ref|ZP_00298056.1|  COG0577: ABC-type antimicrobial p...   195   2e-48 

 gi|23114561|ref|ZP_00099857.1|  COG0577: ABC-type antimicrobial p...   195   3e-48 

 gi|15156928|gb|AAK87586.1|  AGR_C_3336p [Agrobacterium tumefacien...   194   3e-48 

 gi|16264103|ref|NP_436895.1|  hypothetical protein SMb20369 [Sino...   194   3e-48 

 gi|21685503|emb|CAD30167.1|  putative ABC-transporter permease pr...   194   3e-48 

 gi|52841086|ref|YP_094885.1|  ABC transporter, permease protein [...   194   5e-48 

 gi|48844871|ref|ZP_00299165.1|  COG0577: ABC-type antimicrobial p...   194   6e-48 

 gi|52008079|ref|ZP_00335456.1|  COG0577: ABC-type antimicrobial p...   194   6e-48 

 gi|54293825|ref|YP_126240.1|  hypothetical protein lpl0881 [Legio...   193   7e-48 

 gi|45358434|ref|NP_987991.1|  hypothetical protein MMP0871 [Metha...   193   7e-48 

 gi|41720646|ref|ZP_00149459.1|  COG0577: ABC-type antimicrobial p...   192   1e-47 

 gi|20089338|ref|NP_615413.1|  hypothetical protein MA0447 [Methan...   192   2e-47 

 gi|2982995|gb|AAC06608.1|  hypothetical protein [Aquifex aeolicus...   192   2e-47 

 gi|21227053|ref|NP_632975.1|  ABC transporter, permease protein [...   192   2e-47 

 gi|23128707|ref|ZP_00110547.1|  COG0577: ABC-type antimicrobial p...   190   6e-47 

 gi|17935707|ref|NP_532497.1|  hypothetical protein Atu1817 [Agrob...   190   7e-47 

 gi|47565256|ref|ZP_00236298.1|  ABC transporter, ATP-binding prot...   190   8e-47 

 gi|56751433|ref|YP_172134.1|  probable ABC transporter permease p...   190   8e-47 

 gi|20092755|ref|NP_618830.1|  ABC transporter, permease protein [...   190   9e-47 

 gi|47091541|ref|ZP_00229338.1|  ABC transporter, permease protein...   189   1e-46 

 gi|33519853|ref|NP_878685.1|  ABC transporter integral membrane s...   189   1e-46 

 gi|48838382|ref|ZP_00295326.1|  COG0577: ABC-type antimicrobial p...   189   1e-46 

 gi|39995783|ref|NP_951734.1|  ABC transporter, permease protein, ...   189   1e-46 

 gi|52144528|ref|YP_082297.1|  ABC transporter, permease [Bacillus...   189   1e-46 

 gi|45512240|ref|ZP_00163807.1|  COG0577: ABC-type antimicrobial p...   189   2e-46 

 gi|46906636|ref|YP_013025.1|  ABC transporter, permease protein, ...   189   2e-46 

 gi|41689422|ref|ZP_00145956.1|  COG0577: ABC-type antimicrobial p...   189   2e-46 

 gi|23014032|ref|ZP_00053872.1|  COG4591: ABC-type transport syste...   188   2e-46 

 gi|33148377|gb|AAP95897.1|  macrolide-specific ABC-type efflux ca...   188   3e-46 

 gi|52080037|ref|YP_078828.1|  putative ABC transporter permease [...   188   3e-46 

 gi|28899872|ref|NP_799527.1|  hypothetical protein VPA0017 [Vibri...   188   3e-46 

 gi|53688422|ref|ZP_00109956.2|  COG0577: ABC-type antimicrobial p...   187   6e-46 

 gi|30018973|ref|NP_830604.1|  ABC transporter permease protein [B...   187   7e-46 

 gi|56476438|ref|YP_158027.1|  transmembrane ATP-binding ABC trans...   187   7e-46 

 gi|57240328|ref|ZP_00368277.1|  ABC transporter, ATP-binding prot...   187   7e-46 

 gi|47777853|ref|YP_017432.2|  abc transporter, permease protein, ...   187   8e-46 

 gi|46141853|ref|ZP_00147320.2|  COG0577: ABC-type antimicrobial p...   186   1e-45 

 gi|21673217|ref|NP_661282.1|  ABC transporter, ATP-binding protei...   186   1e-45 

 gi|33519855|ref|NP_878687.1|  ABC transporter integral membrane s...   186   1e-45 

 gi|16125183|ref|NP_419747.1|  hypothetical protein CC0931 [Caulob...   186   1e-45 

 gi|6968074|emb|CAB75243.1|  ABC-type transmembrane transport prot...   186   1e-45 

 gi|33237899|gb|AAP99966.1|  ABC-type antimicrobial peptide transp...   185   1e-45 

 gi|22957341|ref|ZP_00005047.1|  COG0577: ABC-type antimicrobial p...   185   2e-45 

 gi|57238197|ref|YP_178722.1|  macrolide-specific efflux protein m...   185   2e-45 

 gi|59713919|ref|YP_206694.1|  ABC transporter permease protein [V...   184   5e-45 

 gi|54302805|ref|YP_132798.1|  hypothetical protein PBPRB1126 [Pho...   184   5e-45 

 gi|6458175|gb|AAF10066.1|  conserved hypothetical protein [Deinoc...   184   6e-45 

 gi|42527544|ref|NP_972642.1|  lipoprotein releasing system, perme...   183   7e-45 

 gi|32034668|ref|ZP_00134806.1|  COG0577: ABC-type antimicrobial p...   183   7e-45 

 gi|42779964|ref|NP_977211.1|  ABC transporter, permease protein, ...   183   7e-45 

 gi|57167894|ref|ZP_00367034.1|  probable integral membrane protei...   183   1e-44 

 gi|56964455|ref|YP_176186.1|  antimicrobial peptide ABC transport...   182   1e-44 

 gi|33862950|ref|NP_894510.1|  possible ABC transporter [Prochloro...   182   1e-44 

 gi|47564731|ref|ZP_00235775.1|  ABC transporter, ATP-binding prot...   182   1e-44 

 gi|54307852|ref|YP_128872.1|  hypothetical protein PBPRA0649 [Pho...   182   1e-44 

 gi|57242014|ref|ZP_00369954.1|  ABC transporter, ATP-binding prot...   182   2e-44 

 gi|47569751|ref|ZP_00240424.1|  ABC transporter, ATP-binding prot...   182   2e-44 

 gi|21673929|ref|NP_661994.1|  hypothetical protein CT1103 [Chloro...   182   2e-44 

 gi|9658285|gb|AAF96752.1|  conserved hypothetical protein [Vibrio...   182   2e-44 

 gi|52140310|ref|YP_086520.1|  ABC transporter, permease [Bacillus...   182   2e-44 

 gi|33861470|ref|NP_893031.1|  possible ABC transporter [Prochloro...   182   2e-44 

 gi|46135393|ref|ZP_00162800.2|  COG0577: ABC-type antimicrobial p...   181   3e-44 

 gi|25011471|ref|NP_735866.1|  hypothetical protein gbs1429 [Strep...   181   3e-44 

 gi|48855576|ref|ZP_00309735.1|  COG4591: ABC-type transport syste...   181   4e-44 

 gi|11498622|ref|NP_069850.1|  hypothetical protein AF1017 [Archae...   181   4e-44 

 gi|20091991|ref|NP_618066.1|  ABC transporter, permease protein [...   181   4e-44 

 gi|33865833|ref|NP_897392.1|  possible ABC transporter [Synechoco...   180   4e-44 

 gi|49480397|ref|YP_039244.1|  ABC transporter, permease [Bacillus...   180   5e-44 

 gi|16119402|ref|NP_396108.1|  hypothetical protein AGR_pAT_247 [A...   180   5e-44 

 gi|22537506|ref|NP_688357.1|  permease, putative [Streptococcus a...   180   6e-44 

 gi|25530473|pir||AC1863  hypothetical protein alr0452 [imported] ...   180   6e-44 

 gi|42523263|ref|NP_968643.1|  lipoprotein releasing system transm...   180   6e-44 

 gi|15602861|ref|NP_245933.1|  hypothetical protein PM0996 [Pasteu...   180   6e-44 

 gi|13471429|ref|NP_102995.1|  permease protein of ABC transporter...   180   8e-44 

 gi|16799496|ref|NP_469764.1|  hypothetical protein lin0419 [Liste...   180   9e-44 

 gi|42784417|ref|NP_981664.1|  ABC transporter, permease protein [...   179   1e-43 

 gi|32263408|gb|AAP78453.1|  ABC transporter [Helicobacter hepatic...   179   2e-43 

 gi|20807653|ref|NP_622824.1|  ABC-type transport systems, involve...   179   2e-43 

 gi|48839504|ref|ZP_00296435.1|  COG0577: ABC-type antimicrobial p...   179   2e-43 

 gi|25532068|pir||AE1862  hypothetical protein alr0446 [imported] ...   178   3e-43 

 gi|30023285|ref|NP_834916.1|  ABC transporter permease protein [B...   178   3e-43 

 gi|53730885|ref|ZP_00151782.2|  COG0577: ABC-type antimicrobial p...   178   3e-43 

 gi|15643119|ref|NP_228162.1|  hypothetical protein TM0351 [Thermo...   178   4e-43 

 gi|28210234|ref|NP_781178.1|  ABC transporter permease protein [C...   177   4e-43 

 gi|35211336|dbj|BAC88715.1|  gll0774 [Gloeobacter violaceus PCC 7...   177   4e-43 

 gi|2621781|gb|AAB85200.1|  conserved protein [Methanothermobacter...   177   4e-43 

 gi|11499065|ref|NP_070299.1|  hypothetical protein AF1470 [Archae...   177   4e-43 

 gi|46135395|ref|ZP_00203487.1|  COG0577: ABC-type antimicrobial p...   177   6e-43 

 gi|20090596|ref|NP_616671.1|  hypothetical protein MA1744 [Methan...   177   6e-43 

 gi|16332318|ref|NP_443046.1|  hypothetical protein slr0594 [Synec...   177   7e-43 

 gi|38233097|ref|NP_938864.1|  Putative ABC transport system integ...   176   1e-42 

 gi|28379430|ref|NP_786322.1|  ABC transporter, ATP-binding and pe...   176   1e-42 

 gi|51892946|ref|YP_075637.1|  ABC transporter permease protein [S...   176   1e-42 

 gi|21227735|ref|NP_633657.1|  ABC transporter, ATP-binding protei...   176   1e-42 

 gi|21673097|ref|NP_661162.1|  hypothetical protein CT0258 [Chloro...   175   1e-42 

 gi|37675675|ref|NP_936071.1|  uncharacterized protein conserved i...   175   1e-42 

 gi|29338783|gb|AAO76582.1|  ABC transporter, permease protein [Ba...   175   2e-42 

 gi|27359141|gb|AAO08086.1|  ABC-type transport system, involved i...   175   2e-42 

 gi|15893536|ref|NP_346885.1|  Integral membrane protein (permease...   175   3e-42 

 gi|48857498|ref|ZP_00311497.1|  COG0577: ABC-type antimicrobial p...   175   3e-42 

 gi|48766277|ref|ZP_00270827.1|  COG0577: ABC-type antimicrobial p...   175   3e-42 

 gi|34396993|gb|AAQ66057.1|  membrane protein, putative [Porphyrom...   174   3e-42 

 gi|30248829|ref|NP_840899.1|  DUF214 [Nitrosomonas europaea ATCC ...   174   3e-42 

 gi|50812292|ref|NP_391207.2|  hypothetical protein BSU33260 [Baci...   174   3e-42 

 gi|32475983|ref|NP_868977.1|  ABC transporter, ATP-binding protei...   174   4e-42 

 gi|57167636|ref|ZP_00366776.1|  ABC transporter, ATP-binding prot...   174   5e-42 

 gi|23097618|ref|NP_691084.1|  hypothetical protein OB0163 [Oceano...   174   6e-42 

 gi|27380415|ref|NP_771944.1|  ABC transporter permease protein [B...   173   8e-42 

 gi|3322875|gb|AAC65556.1|  conserved hypothetical integral membra...   173   8e-42 

 gi|56477741|ref|YP_159330.1|  putative ABC transporter protein [A...   173   8e-42 

 gi|20095091|ref|NP_614938.1|  Permease subunit of a ABC-type tran...   173   9e-42 

 gi|45441503|ref|NP_993042.1|  putative membrane protein [Yersinia...   173   9e-42 

 gi|32474570|ref|NP_867564.1|  probable ATP-binding/permease fusio...   173   9e-42 

 gi|51596269|ref|YP_070460.1|  putative ABC transporter, permease ...   172   1e-41 

 gi|56477740|ref|YP_159329.1|  putative ABC transporter protein [A...   172   1e-41 

 gi|41614969|ref|NP_963467.1|  hypothetical protein NEQ175 [Nanoar...   172   1e-41 

 gi|10038970|dbj|BAB13005.1|  hypothetical protein [Buchnera aphid...   172   2e-41 

 gi|50589966|ref|ZP_00331419.1|  COG0577: ABC-type antimicrobial p...   172   2e-41 

 gi|21229200|ref|NP_635122.1|  ABC transporter, permease protein [...   172   2e-41 

 gi|16078501|ref|NP_389320.1|  hypothetical protein BSU14370 [Baci...   172   2e-41 

 gi|15979962|emb|CAC90760.1|  putative membrane protein [Yersinia ...   172   3e-41 

 gi|25532195|pir||AE1994  hypothetical protein alr1506 [imported] ...   171   4e-41 

 gi|16080093|ref|NP_390919.1|  hypothetical protein BSU30410 [Baci...   171   4e-41 

 gi|46141854|ref|ZP_00147321.2|  COG0577: ABC-type antimicrobial p...   171   4e-41 

 gi|25166055|dbj|BAC24246.1|  ycfU [Wigglesworthia glossinidia end...   170   4e-41 

 gi|24377240|gb|AAN58579.1|  putative ABC transporter, permease co...   170   6e-41 

 gi|34397272|gb|AAQ66335.1|  membrane protein, putative [Porphyrom...   170   8e-41 

 gi|29339807|gb|AAO77602.1|  ABC transporter, putative permease [B...   170   9e-41 

 gi|48841243|ref|ZP_00298169.1|  COG0577: ABC-type antimicrobial p...   170   9e-41 

 gi|48870960|ref|ZP_00323677.1|  COG1136: ABC-type antimicrobial p...   170   9e-41 

 gi|22298926|ref|NP_682173.1|  ABC transporter permease protein [T...   170   1e-40 

 gi|53711851|ref|YP_097843.1|  ABC transporter putative permease [...   170   1e-40 

 gi|27378818|ref|NP_770347.1|  probable ATP-binding protein [Brady...   169   1e-40 

 gi|29377448|ref|NP_816602.1|  permease, putative [Enterococcus fa...   169   1e-40 

 gi|48845591|ref|ZP_00299868.1|  COG0577: ABC-type antimicrobial p...   169   1e-40 

 gi|28900414|ref|NP_800069.1|  hypothetical protein VPA0559 [Vibri...   169   1e-40 

 gi|35211055|dbj|BAC88435.1|  gll0494 [Gloeobacter violaceus PCC 7...   169   2e-40 

 gi|21673928|ref|NP_661993.1|  hypothetical protein CT1102 [Chloro...   169   2e-40 

 gi|48841198|ref|ZP_00298124.1|  COG0577: ABC-type antimicrobial p...   168   2e-40 

 gi|42527785|ref|NP_972883.1|  permease, putative [Treponema denti...   168   2e-40 

 gi|47564782|ref|ZP_00235826.1|  ABC transporter, ATP-binding prot...   168   3e-40 

 gi|3322873|gb|AAC65554.1|  conserved hypothetical integral membra...   168   3e-40 

 gi|41719598|ref|ZP_00148474.1|  COG0577: ABC-type antimicrobial p...   168   3e-40 

 gi|54302804|ref|YP_132797.1|  hypothetical protein PBPRB1125 [Pho...   168   4e-40 

 gi|48765803|ref|ZP_00270353.1|  COG4591: ABC-type transport syste...   167   4e-40 

 gi|20089984|ref|NP_616059.1|  ABC transporter, permease protein [...   167   5e-40 

 gi|41725133|ref|ZP_00151891.1|  COG0577: ABC-type antimicrobial p...   167   7e-40 

 gi|45524664|ref|ZP_00175935.1|  COG0577: ABC-type antimicrobial p...   167   8e-40 

 gi|48863400|ref|ZP_00317294.1|  COG0577: ABC-type antimicrobial p...   167   8e-40 

 gi|21227049|ref|NP_632971.1|  hypothetical protein MM0947 [Methan...   166   9e-40 

 gi|42527546|ref|NP_972644.1|  lipoprotein releasing system, perme...   166   1e-39 

 gi|7672272|emb|CAB89462.1|  putative ABC transporter integral mem...   166   1e-39 

 gi|49236576|ref|ZP_00330634.1|  COG0577: ABC-type antimicrobial p...   166   1e-39 

 gi|13622010|gb|AAK33768.1|  conserved hypothetical protein [Strep...   166   1e-39 

 gi|39996442|ref|NP_952393.1|  ABC transporter, permease protein [...   165   1e-39 

 gi|4586220|emb|CAB40972.1|  hypothetical protein [Porphyromonas g...   165   2e-39 

 gi|15896818|ref|NP_350167.1|  Predicted permease [Clostridium ace...   165   2e-39 

 gi|21674420|ref|NP_662485.1|  lipoprotein releasing system [Chlor...   165   2e-39 

 gi|28898770|ref|NP_798375.1|  hypothetical protein VP1996 [Vibrio...   165   2e-39 

 gi|20091377|ref|NP_617452.1|  ABC transporter, permease protein [...   165   2e-39 

 gi|10175743|dbj|BAB06840.1|  BH3121 [Bacillus halodurans C-125] >...   165   2e-39 

 gi|15668983|ref|NP_247787.1|  hypothetical protein MJ0797 [Methan...   165   2e-39 

 gi|28896201|ref|NP_802551.1|  hypothetical protein SPs1289 [Strep...   165   3e-39 

 gi|19748069|gb|AAL97549.1|  conserved hypothetical protein [Strep...   165   3e-39 

 gi|51892115|ref|YP_074806.1|  ABC transporter permease protein [S...   164   4e-39 

 gi|29339808|gb|AAO77603.1|  putative ABC transporter, ATP-binding...   164   4e-39 

 gi|56807831|ref|ZP_00365674.1|  COG0577: ABC-type antimicrobial p...   164   5e-39 

 gi|35211054|dbj|BAC88434.1|  gll0493 [Gloeobacter violaceus PCC 7...   164   6e-39 

 gi|55229890|gb|AAV45309.1|  ABC transporter permease protein [Hal...   164   6e-39 

 gi|52843116|ref|YP_096915.1|  ABC transporter, permease [Legionel...   164   6e-39 

 gi|30248830|ref|NP_840900.1|  DUF214 [Nitrosomonas europaea ATCC ...   164   6e-39 

 gi|45358084|ref|NP_987641.1|  ABC transporter, permease protein [...   164   7e-39 

 gi|54298922|ref|YP_125291.1|  hypothetical protein lpp2989 [Legio...   163   8e-39 

 gi|55376281|ref|YP_134134.1|  ABC transporter permease protein [H...   163   8e-39 

 gi|32474517|ref|NP_867511.1|  probable lipoprotein releasing syst...   162   2e-38 

 gi|20092759|ref|NP_618834.1|  ABC transporter, permease protein [...   161   3e-38 

 gi|52081526|ref|YP_080317.1|  possible acetoin transport system s...   161   3e-38 

 gi|29655095|ref|NP_820787.1|  ABC transporter, permease protein [...   161   3e-38 

 gi|49476201|ref|YP_034242.1|  ABC transporter, ATP-binding protei...   161   3e-38 

 gi|23125762|ref|ZP_00107681.1|  COG0577: ABC-type antimicrobial p...   161   4e-38 

 gi|21672562|ref|NP_660629.1|  hypothetical 43.3 kDa protein [Buch...   160   5e-38 

 gi|18643163|gb|AAL76237.1|  DppA [Pseudoalteromonas tunicata]          160   5e-38 

 gi|23475614|ref|ZP_00130898.1|  COG0577: ABC-type antimicrobial p...   160   6e-38 

 gi|27358966|gb|AAO07914.1|  ABC-type antimicrobial peptide transp...   160   6e-38 

 gi|53711850|ref|YP_097842.1|  putative ABC transporter ATP-bindin...   160   6e-38 

 gi|28900413|ref|NP_800068.1|  hypothetical protein VPA0558 [Vibri...   160   7e-38 

 gi|34332912|gb|AAQ62055.2|  probable ABC transporter,  permease p...   160   7e-38 

 gi|15672696|ref|NP_266870.1|  ABC transporter ATP-binding and per...   160   8e-38 

 gi|27382091|ref|NP_773620.1|  probable ABC transporter permease p...   159   1e-37 

 gi|39934719|ref|NP_946995.1|  predicted ABC-type transport system...   159   1e-37 

 gi|60491512|emb|CAH06264.1|  putative ATP-binding component of AB...   159   1e-37 

 gi|35210906|dbj|BAC88286.1|  gll0345 [Gloeobacter violaceus PCC 7...   159   1e-37 

 gi|37677157|ref|NP_937553.1|  ABC-type antimicrobial peptide tran...   159   2e-37 

 gi|10241793|emb|CAC09551.1|  putative ABC transport system integr...   159   2e-37 

 gi|59711713|ref|YP_204489.1|  hypothetical protein VF1106 [Vibrio...   159   2e-37 

 gi|54302049|ref|YP_132042.1|  hypothetical protein PBPRB0369 [Pho...   158   3e-37 

 gi|30250174|ref|NP_842244.1|  DUF214 [Nitrosomonas europaea ATCC ...   158   3e-37 

 gi|20091110|ref|NP_617185.1|  ABC transporter, permease protein [...   158   3e-37 

 gi|19577297|emb|CAD27717.1|  membrane subunit [Enterococcus faeca...   158   3e-37 

 gi|46106219|ref|ZP_00186780.2|  COG0577: ABC-type antimicrobial p...   158   3e-37 

 gi|15900680|ref|NP_345284.1|  hypothetical protein SP0787 [Strept...   158   3e-37 

 gi|41718726|ref|ZP_00147695.1|  COG0577: ABC-type antimicrobial p...   158   4e-37 

 gi|50841543|ref|YP_054770.1|  ABC transporter associated permease...   157   5e-37 

 gi|15902739|ref|NP_358289.1|  hypothetical protein spr0695 [Strep...   157   5e-37 

 gi|2879915|dbj|BAA24813.1|  bacI [Enterococcus faecalis]               157   6e-37 

 gi|16800256|ref|NP_470524.1|  hypothetical protein lin1187 [Liste...   157   6e-37 

 gi|23024430|ref|ZP_00063642.1|  COG1136: ABC-type antimicrobial p...   157   6e-37 

 gi|50915072|ref|YP_061044.1|  ABC transporter permease protein [S...   157   7e-37 

 gi|28896643|ref|NP_802993.1|  putative ABC transporter (ATP-bindi...   157   7e-37 

 gi|21674173|ref|NP_662238.1|  ABC transporter efflux protein [Chl...   157   8e-37 

 gi|19749165|gb|AAL98552.1|  putative ABC transporter (ATP-binding...   156   9e-37 

 gi|34763698|ref|ZP_00144622.1|  EXPORT ABC TRANSPORTER PERMEASE P...   156   9e-37 

 gi|9656075|gb|AAF94721.1|  conserved hypothetical protein [Vibrio...   156   1e-36 

 gi|23468559|ref|ZP_00123894.1|  COG0577: ABC-type antimicrobial p...   156   1e-36 

 gi|21325766|dbj|BAC00387.1|  ABC-type transporter, permease compo...   156   1e-36 

 gi|29607180|dbj|BAC71239.1|  putative ABC transporter integral me...   155   2e-36 

 gi|28867909|ref|NP_790528.1|  permease, putative [Pseudomonas syr...   155   2e-36 

 gi|27469323|ref|NP_765960.1|  Enterococcus faecalis plasmid pPD1 ...   155   2e-36 

 gi|53761955|ref|ZP_00167721.2|  COG0577: ABC-type antimicrobial p...   155   2e-36 

 gi|21674172|ref|NP_662237.1|  ABC transporter efflux protein [Chl...   155   3e-36 

 gi|34397621|gb|AAQ66683.1|  ABC transporter, permease protein, pu...   154   4e-36 

 gi|49474723|ref|YP_032765.1|  ABC transporter, ATP-binding protei...   154   5e-36 

 gi|48853908|ref|ZP_00308073.1|  COG4591: ABC-type transport syste...   153   8e-36 

 gi|48866288|ref|ZP_00320144.1|  COG1136: ABC-type antimicrobial p...   153   9e-36 

 gi|19704163|ref|NP_603725.1|  ABC transporter permease protein [F...   153   9e-36 

 gi|21229115|ref|NP_635037.1|  ABC transporter, permease protein [...   153   9e-36 

 gi|29376226|ref|NP_815380.1|  permease protein, putative [Enteroc...   153   9e-36 

 gi|21227711|ref|NP_633633.1|  ABC transporter, permease protein [...   153   1e-35 

 gi|12514425|gb|AAG55669.1|  orf; Unknown function [Escherichia co...   153   1e-35 

 gi|15673086|ref|NP_267260.1|  ABC transporter permease protein [L...   152   1e-35 

 gi|40062675|gb|AAR37588.1|  permease, putative [uncultured bacter...   152   1e-35 

 gi|47095309|ref|ZP_00232920.1|  ABC transporter, ATP-binding/perm...   152   2e-35 

 gi|40062676|gb|AAR37589.1|  permease, putative [uncultured bacter...   152   2e-35 

 gi|47092023|ref|ZP_00229817.1|  ABC transporter, permease protein...   152   2e-35 

 gi|48728920|ref|ZP_00262673.1|  COG0577: ABC-type antimicrobial p...   152   3e-35 

 gi|32039235|ref|ZP_00137507.1|  COG0577: ABC-type antimicrobial p...   152   3e-35 

 gi|46907443|ref|YP_013832.1|  ABC transporter, permease protein [...   151   3e-35 

 gi|9950842|gb|AAG07981.1|  probable permease of ABC transporter [...   151   3e-35 

 gi|48845105|ref|ZP_00299393.1|  COG0577: ABC-type antimicrobial p...   151   3e-35 

 gi|16802786|ref|NP_464271.1|  hypothetical protein lmo0744 [Liste...   151   3e-35 

 gi|32812399|emb|CAD97587.1|  putative ABC transporter permease [C...   151   4e-35 

 gi|28898771|ref|NP_798376.1|  hypothetical protein VP1997 [Vibrio...   151   4e-35 

 gi|20089271|ref|NP_615346.1|  hypothetical protein MA0374 [Methan...   150   5e-35 

 gi|23475613|ref|ZP_00130897.1|  COG0577: ABC-type antimicrobial p...   150   6e-35 

 gi|26987245|ref|NP_742670.1|  ABC efflux transporter, permease pr...   150   6e-35 

 gi|59711712|ref|YP_204488.1|  transporter [Vibrio fischeri ES114]...   150   7e-35 

 gi|46165039|ref|ZP_00138149.2|  COG0577: ABC-type antimicrobial p...   150   7e-35 

 gi|16803264|ref|NP_464749.1|  hypothetical protein lmo1224 [Liste...   149   1e-34 

 gi|50120448|ref|YP_049615.1|  putative permease [Erwinia carotovo...   149   1e-34 

 gi|15893612|ref|NP_346961.1|  Predicted permease [Clostridium ace...   148   2e-34 

 gi|46906989|ref|YP_013378.1|  ABC transporter, ATP-binding/permea...   148   2e-34 

 gi|50120449|ref|YP_049616.1|  putative permease [Erwinia carotovo...   148   2e-34 

 gi|29610750|dbj|BAC74795.1|  putative ABC transporter integral me...   148   2e-34 

 gi|47091701|ref|ZP_00229497.1|  ABC transporter, ATP-binding/perm...   148   2e-34 

 gi|15921140|ref|NP_376809.1|  hypothetical protein ST0904 [Sulfol...   148   3e-34 

 gi|53685188|ref|ZP_00098642.2|  COG0577: ABC-type antimicrobial p...   148   3e-34 

 gi|48772589|ref|ZP_00276931.1|  COG0577: ABC-type antimicrobial p...   148   3e-34 

 gi|56808486|ref|ZP_00366227.1|  COG0577: ABC-type antimicrobial p...   148   4e-34 

 gi|45658274|ref|YP_002360.1|  lipoprotein releasing system, perme...   147   5e-34 

 gi|54295759|ref|YP_128174.1|  hypothetical protein lpl2849 [Legio...   147   5e-34 

 gi|15894110|ref|NP_347459.1|  Predicted membrane protein [Clostri...   147   6e-34 

 gi|10176298|dbj|BAB07393.1|  ABC transporter (ATP-binding protein...   147   7e-34 

 gi|13880581|gb|AAK45263.1|  conserved hypothetical protein [Mycob...   147   8e-34 

 gi|31792177|ref|NP_854670.1|  PROBABLE ADHESION COMPONENT TRANSPO...   146   1e-33 

 gi|18145202|dbj|BAB81246.1|  probable ABC transporter [Clostridiu...   146   1e-33 

 gi|15608127|ref|NP_215502.1|  PROBABLE ADHESION COMPONENT TRANSPO...   146   1e-33 

 gi|23471760|ref|ZP_00127089.1|  COG0577: ABC-type antimicrobial p...   146   1e-33 

 gi|30250172|ref|NP_842242.1|  DUF214 [Nitrosomonas europaea ATCC ...   146   1e-33 

 gi|15897947|ref|NP_342552.1|  hypothetical protein SSO1080 [Sulfo...   146   1e-33 

 gi|18314244|ref|NP_560911.1|  hypothetical protein PAE3684 [Pyrob...   145   2e-33 

 gi|23111965|ref|ZP_00097518.1|  COG0577: ABC-type antimicrobial p...   145   2e-33 

 gi|48837212|ref|ZP_00294207.1|  COG0577: ABC-type antimicrobial p...   145   2e-33 

 gi|15896817|ref|NP_350166.1|  Predicted permease [Clostridium ace...   145   3e-33 

 gi|46581723|ref|YP_012531.1|  ABC transporter, permease protein [...   144   4e-33 

 gi|37526538|ref|NP_929882.1|  hypothetical protein plu2647 [Photo...   144   4e-33 

 gi|54026627|ref|YP_120869.1|  putative ABC transporter permease [...   144   5e-33 

 gi|49243518|emb|CAG41942.1|  putative permease protein [Staphyloc...   143   6e-33 

 gi|3323283|gb|AAC65917.1|  conserved hypothetical integral membra...   143   6e-33 

 gi|42782273|ref|NP_979520.1|  permease, putative [Bacillus cereus...   143   8e-33 

 gi|53689376|ref|ZP_00063554.2|  COG0577: ABC-type antimicrobial p...   143   1e-32 

 gi|53798558|ref|ZP_00358981.1|  COG0577: ABC-type antimicrobial p...   143   1e-32 

 gi|29375889|ref|NP_815043.1|  permease domain protein [Enterococc...   142   2e-32 

 gi|18314231|ref|NP_560898.1|  hypothetical protein PAE3663 [Pyrob...   142   2e-32 

 gi|50591446|ref|ZP_00332757.1|  COG0577: ABC-type antimicrobial p...   142   2e-32 

 gi|48839337|ref|ZP_00296270.1|  COG0577: ABC-type antimicrobial p...   142   3e-32 

 gi|51596268|ref|YP_070459.1|  putative ABC transporter, permease ...   142   3e-32 

 gi|9656074|gb|AAF94720.1|  conserved hypothetical protein [Vibrio...   141   3e-32 

 gi|15893745|ref|NP_347094.1|  Predicted ATP transporter permease ...   141   4e-32 

 gi|695784|emb|CAA58843.1|  orf3 [Zymomonas mobilis]                    141   4e-32 

 gi|23103026|ref|ZP_00089519.1|  COG4591: ABC-type transport syste...   141   4e-32 

 gi|42522660|ref|NP_968040.1|  ABC-type antimicrobial peptide tran...   141   5e-32 

 gi|32473028|ref|NP_866022.1|  hypothetical protein RB4305 [Rhodop...   141   5e-32 

 gi|23113782|ref|ZP_00099129.1|  COG0577: ABC-type antimicrobial p...   140   6e-32 

 gi|42524549|ref|NP_969929.1|  ABC-type lipoprotein transporter, p...   140   6e-32 

 gi|32474306|ref|NP_867300.1|  conserved hypothetical protein-puta...   140   7e-32 

 gi|48863399|ref|ZP_00317293.1|  COG0577: ABC-type antimicrobial p...   140   9e-32 

 gi|17982260|gb|AAL51542.1|  ABC TRANSPORTER ATP-BINDING PROTEIN /...   139   1e-31 

 gi|45521697|ref|ZP_00173215.1|  COG0577: ABC-type antimicrobial p...   139   1e-31 

 gi|29607203|dbj|BAC71262.1|  putative ABC transporter integral me...   139   1e-31 

 gi|15789343|ref|NP_279167.1|  hypothetical protein VNG0003C [Halo...   139   1e-31 

 gi|55230250|gb|AAV45669.1|  ABC transporter permease protein [Hal...   139   1e-31 

 gi|54302050|ref|YP_132043.1|  hypothetical protein PBPRB0370 [Pho...   139   1e-31 

 gi|9950262|gb|AAG07452.1|  hypothetical protein PA4065 [Pseudomon...   139   2e-31 

 gi|46580842|ref|YP_011650.1|  ABC transporter, permease protein [...   139   2e-31 

 gi|48858320|ref|ZP_00312278.1|  COG0577: ABC-type antimicrobial p...   138   2e-31 

 gi|15602314|ref|NP_245386.1|  hypothetical protein PM0449 [Pasteu...   138   2e-31 

 gi|28379326|ref|NP_786218.1|  ABC transporter, permease protein (...   138   3e-31 

 gi|53685362|ref|ZP_00098650.2|  COG0577: ABC-type antimicrobial p...   138   4e-31 

 gi|52549161|gb|AAU83010.1|  ABC transporter permease protein [unc...   138   4e-31 

 gi|42527356|ref|NP_972454.1|  ABC transporter, permease protein, ...   137   4e-31 

 gi|56461365|ref|YP_156646.1|  ABC-type transport system, permease...   137   4e-31 

 gi|25028992|ref|NP_739046.1|  putative ABC transporter permease p...   137   5e-31 

 gi|53686129|ref|ZP_00344873.1|  COG0577: ABC-type antimicrobial p...   137   6e-31 

 gi|41326732|emb|CAF21214.1|  ABC-type transport system, involved ...   137   6e-31 

 gi|21325324|dbj|BAB99945.1|  ABC-type transporter, permease compo...   137   6e-31 

 gi|27360292|gb|AAO09229.1|  ABC-type antimicrobial peptide transp...   137   7e-31 

 gi|6458160|gb|AAF10053.1|  conserved hypothetical protein [Deinoc...   137   7e-31 

 gi|37678602|ref|NP_933211.1|  ABC-type antimicrobial peptide tran...   137   8e-31 

 gi|21203338|dbj|BAB94039.1|  MW0174 [Staphylococcus aureus subsp....   137   8e-31 

 gi|59711771|ref|YP_204547.1|  export ABC transporter permease pro...   137   9e-31 

 gi|49478827|ref|YP_038974.1|  conserved hypothetical protein, pos...   137   9e-31 

 gi|34397622|gb|AAQ66684.1|  ABC transporter, permease protein, pu...   136   9e-31 

 gi|59710933|ref|YP_203709.1|  permease [Vibrio fischeri ES114] >g...   136   9e-31 

 gi|46314341|ref|ZP_00214927.1|  COG4591: ABC-type transport syste...   136   1e-30 

 gi|28211095|ref|NP_782039.1|  putative permease [Clostridium teta...   136   1e-30 

 gi|38234455|ref|NP_940222.1|  Putative ABC transport system perme...   136   1e-30 

 gi|48765856|ref|ZP_00270406.1|  COG0577: ABC-type antimicrobial p...   136   1e-30 

 gi|7430330|pir||G70047  conserved hypothetical protein yvrM - Bac...   135   2e-30 

 gi|21228993|ref|NP_634915.1|  ABC transporter, permease protein [...   135   3e-30 

 gi|21323171|dbj|BAB97799.1|  ABC-type transport systems, involved...   135   3e-30 

 gi|19551651|ref|NP_599653.1|  ABC-type transport system permease ...   135   3e-30 

 gi|22537163|ref|NP_688014.1|  permease, putative [Streptococcus a...   135   3e-30 

 gi|25011092|ref|NP_735487.1|  hypothetical protein gbs1038 [Strep...   134   4e-30 

 gi|18144407|dbj|BAB80453.1|  hypothetical protein [Clostridium pe...   134   4e-30 

 gi|28379048|ref|NP_785940.1|  ABC transporter, ATP-binding and pe...   134   4e-30 

 gi|37677158|ref|NP_937554.1|  ABC-type antimicrobial peptide tran...   134   5e-30 

 gi|53731618|ref|ZP_00349217.1|  COG0577: ABC-type antimicrobial p...   134   6e-30 

 gi|59711770|ref|YP_204546.1|  export ABC transporter permease pro...   134   6e-30 

 gi|37526626|ref|NP_929970.1|  hypothetical protein plu2736 [Photo...   134   6e-30 

 gi|46446450|ref|YP_007815.1|  hypothetical protein pc0816 [Parach...   133   7e-30 

 gi|20092387|ref|NP_618462.1|  ABC transporter, permease protein [...   133   7e-30 

 gi|46310933|ref|ZP_00211548.1|  COG0577: ABC-type antimicrobial p...   133   9e-30 

 gi|27358967|gb|AAO07915.1|  ABC-type antimicrobial peptide transp...   133   1e-29 

 gi|58338158|ref|YP_194743.1|  ABC transporter permease protein [L...   133   1e-29 

 gi|23002215|ref|ZP_00045893.1|  COG0577: ABC-type antimicrobial p...   133   1e-29 

 gi|24378290|gb|AAN59539.1|  putative ABC transporter, permease pr...   133   1e-29 

 gi|15604870|ref|NP_219654.1|  hypothetical protein CT151 [Chlamyd...   133   1e-29 

 gi|15625441|gb|AAL04089.1|  PsaB [Streptococcus mutans]                132   2e-29 

 gi|46313606|ref|ZP_00214195.1|  COG4591: ABC-type transport syste...   132   2e-29 

 gi|15903539|ref|NP_359089.1|  hypothetical protein spr1496 [Strep...   132   2e-29 

 gi|42527022|ref|NP_972120.1|  permease domain protein [Treponema ...   132   2e-29 

 gi|54307586|ref|YP_128606.1|  putative ABC-type antimicrobial pep...   132   2e-29 

 gi|28897074|ref|NP_796679.1|  hypothetical protein VP0300 [Vibrio...   132   2e-29 

 gi|15901487|ref|NP_346091.1|  hypothetical protein SP1652 [Strept...   132   2e-29 

 gi|56808389|ref|ZP_00366142.1|  COG0577: ABC-type antimicrobial p...   132   3e-29 

 gi|57238673|ref|YP_179804.1|  ABC transporter, permease protein [...   132   3e-29 

 gi|39996266|ref|NP_952217.1|  ABC transporter, permease protein [...   131   3e-29 

 gi|7190473|gb|AAF39285.1|  conserved hypothetical protein [Chlamy...   131   3e-29 

 gi|48826262|ref|ZP_00287484.1|  COG0577: ABC-type antimicrobial p...   131   4e-29 

 gi|13622383|gb|AAK34110.1|  hypothetical protein SPy1255 [Strepto...   131   5e-29 

 gi|25045975|gb|AAN71839.1|  SA0193/BacI-like protein [Staphylococ...   130   5e-29 

 gi|48871167|ref|ZP_00323883.1|  COG0577: ABC-type antimicrobial p...   130   6e-29 

 gi|19704689|ref|NP_604251.1|  ABC transporter permease protein [F...   130   6e-29 

 gi|23335686|ref|ZP_00120920.1|  COG0577: ABC-type antimicrobial p...   130   7e-29 

 gi|23465504|ref|NP_696107.1|  possible transport protein [Bifidob...   130   8e-29 

 gi|29606972|dbj|BAC71032.1|  putative integral membrane protein [...   130   8e-29 

 gi|50914301|ref|YP_060273.1|  ABC transporter permease protein [S...   130   8e-29 

 gi|50843475|ref|YP_056702.1|  ABC transporter associated permease...   130   9e-29 

 gi|6015790|emb|CAB57617.1|  hypothetical protein [Sulfolobus solf...   130   9e-29 

 gi|56962482|ref|YP_174208.1|  antimicrobial peptide ABC transport...   130   1e-28 

 gi|48845918|ref|ZP_00300188.1|  COG0577: ABC-type antimicrobial p...   130   1e-28 

 gi|23104475|ref|ZP_00090939.1|  COG0577: ABC-type antimicrobial p...   129   1e-28 

 gi|32476753|ref|NP_869747.1|  probable ABC transport system integ...   129   1e-28 

 gi|6969078|emb|CAB73649.1|  putative integral membrane protein [C...   129   1e-28 

 gi|46318353|ref|ZP_00218816.1|  COG0577: ABC-type antimicrobial p...   129   1e-28 

 gi|9657139|gb|AAF95695.1|  conserved hypothetical protein [Vibrio...   129   2e-28 

 gi|48866054|ref|ZP_00319911.1|  COG0577: ABC-type antimicrobial p...   129   2e-28 

 gi|34762927|ref|ZP_00143907.1|  ABC transporter permease protein ...   128   2e-28 

 gi|23111964|ref|ZP_00097517.1|  COG0577: ABC-type antimicrobial p...   128   2e-28 

 gi|15602315|ref|NP_245387.1|  hypothetical protein PM0450 [Pasteu...   128   3e-28 

 gi|15898611|ref|NP_343216.1|  hypothetical protein SSO1810 [Sulfo...   128   3e-28 

 gi|15895273|ref|NP_348622.1|  Predicted permease [Clostridium ace...   127   4e-28 

 gi|25166057|dbj|BAC24248.1|  ycfW [Wigglesworthia glossinidia end...   127   5e-28 

 gi|8894820|emb|CAB96016.1|  putative ABC transport system integra...   127   5e-28 

 gi|19704688|ref|NP_604250.1|  ABC transporter permease protein [F...   127   7e-28 

 gi|24377544|gb|AAN58857.1|  putative ABC transporter, permease pr...   127   7e-28 

 gi|46190826|ref|ZP_00206578.1|  COG0577: ABC-type antimicrobial p...   127   7e-28 

 gi|25026982|ref|NP_737036.1|  hypothetical protein CE0426 [Coryne...   127   7e-28 

 gi|53723341|ref|YP_112326.1|  putative permease [Burkholderia pse...   127   8e-28 

 gi|53715894|ref|YP_106592.1|  ABC transporter, permease protein, ...   126   1e-27 

 gi|32473034|ref|NP_866028.1|  hypothetical protein-transmembrane ...   126   1e-27 

 gi|57168779|ref|ZP_00367910.1|  ABC transporter, ATP-binding prot...   126   1e-27 

 gi|20091663|ref|NP_617738.1|  ABC transporter, permease protein [...   126   1e-27 

 gi|57240580|ref|ZP_00368529.1|  probable integral membrane protei...   126   2e-27 

 gi|32473364|ref|NP_866358.1|  hypothetical protein RB4864 [Rhodop...   125   2e-27 

 gi|23465701|ref|NP_696304.1|  protein with weak similarity to com...   125   2e-27 

 gi|23335685|ref|ZP_00120919.1|  COG0577: ABC-type antimicrobial p...   125   2e-27 

 gi|28378125|ref|NP_785017.1|  ABC transporter, ATP-binding and pe...   125   2e-27 

 gi|62148209|emb|CAH63966.1|  lipoprotein releasing system transme...   125   2e-27 

 gi|35211765|dbj|BAC89142.1|  gll1201 [Gloeobacter violaceus PCC 7...   125   2e-27 

 gi|48862085|ref|ZP_00315983.1|  COG0577: ABC-type antimicrobial p...   125   3e-27 

 gi|47575565|ref|ZP_00245600.1|  COG0577: ABC-type antimicrobial p...   125   3e-27 

 gi|28896003|ref|NP_802353.1|  hypothetical protein SPs1091 [Strep...   125   3e-27 

 gi|23465048|ref|NP_695651.1|  possible permease protein of ABC tr...   125   3e-27 

 gi|46190454|ref|ZP_00121484.2|  COG0577: ABC-type antimicrobial p...   124   4e-27 

 gi|19748365|gb|AAL97819.1|  hypothetical protein [Streptococcus p...   124   4e-27 

 gi|39996265|ref|NP_952216.1|  ABC transporter, permease protein [...   124   4e-27 

 gi|48839088|ref|ZP_00296023.1|  COG0577: ABC-type antimicrobial p...   124   5e-27 

 gi|34557889|ref|NP_907704.1|  ABC TRANSPORT PERMEASE PROTEIN-Invo...   124   6e-27 

 gi|34762928|ref|ZP_00143908.1|  ABC transporter permease protein ...   124   6e-27 

 gi|29840287|ref|NP_829393.1|  permease, putative [Chlamydophila c...   123   7e-27 

 gi|53731492|ref|ZP_00349179.1|  COG0577: ABC-type antimicrobial p...   123   8e-27 

 gi|15902568|ref|NP_358118.1|  ABC transporter membrane-spanning p...   123   8e-27 

 gi|48859666|ref|ZP_00313597.1|  COG0577: ABC-type antimicrobial p...   123   1e-26 

 gi|33236099|gb|AAP98189.1|  hypothetical protein CpB0256 [Chlamyd...   123   1e-26 

 gi|42527023|ref|NP_972121.1|  permease domain protein [Treponema ...   123   1e-26 

 gi|54293171|ref|YP_125586.1|  hypothetical protein lpl0217 [Legio...   122   2e-26 

 gi|28868843|ref|NP_791462.1|  ABC transporter, permease protein, ...   122   2e-26 

 gi|54026221|ref|YP_120463.1|  putative transporter permease [Noca...   122   2e-26 

 gi|48863095|ref|ZP_00316989.1|  COG0577: ABC-type antimicrobial p...   122   2e-26 

 gi|51891745|ref|YP_074436.1|  putative ABC transporter permease p...   122   2e-26 

 gi|15835784|ref|NP_300308.1|  CT151 hypothetical protein [Chlamyd...   122   2e-26 

 gi|46310932|ref|ZP_00211547.1|  COG0577: ABC-type antimicrobial p...   122   3e-26 

 gi|15896796|ref|NP_350145.1|  ABC-type transporter, permease comp...   122   3e-26 

 gi|21228766|ref|NP_634688.1|  hypothetical protein MM2664 [Methan...   122   3e-26 

 gi|11499408|ref|NP_070647.1|  hypothetical protein AF1820 [Archae...   122   3e-26 

 gi|58338181|ref|YP_194766.1|  ABC transporter ATP binding protein...   121   3e-26 

 gi|50955706|ref|YP_062994.1|  hypothetical protein Lxx22040 [Leif...   121   4e-26 

 gi|18313238|ref|NP_559905.1|  hypothetical protein PAE2288 [Pyrob...   121   4e-26 

 gi|6969077|emb|CAB73648.1|  possible ABC transport system permeas...   121   5e-26 

 gi|55981802|ref|YP_145099.1|  ABC transporter, permease protein [...   120   5e-26 

 gi|47575347|ref|ZP_00245382.1|  COG0577: ABC-type antimicrobial p...   120   7e-26 

 gi|46199784|ref|YP_005451.1|  ABC transporter permease protein [T...   120   8e-26 

 gi|3323284|gb|AAC65918.1|  conserved hypothetical integral membra...   120   1e-25 

 gi|57238672|ref|YP_179803.1|  ABC transporter, permease protein [...   120   1e-25 

 gi|15900507|ref|NP_345111.1|  transmembrane protein Vexp1 [Strept...   119   1e-25 

 gi|48826283|ref|ZP_00287505.1|  COG1136: ABC-type antimicrobial p...   118   2e-25 

 gi|53684160|ref|ZP_00103626.2|  COG0577: ABC-type antimicrobial p...   118   2e-25 

 gi|23003154|ref|ZP_00046822.1|  COG1136: ABC-type antimicrobial p...   118   3e-25 

 gi|53685146|ref|ZP_00097994.2|  COG1136: ABC-type antimicrobial p...   118   3e-25 

 gi|51245635|ref|YP_065519.1|  similar to lipoprotein releasing sy...   118   3e-25 

 gi|22536848|ref|NP_687699.1|  permease, putative [Streptococcus a...   117   6e-25 

 gi|29609574|dbj|BAC73624.1|  putative integral membrane protein [...   117   6e-25 

 gi|24377723|gb|AAN59020.1|  conserved hypothetical protein; possi...   117   8e-25 

 gi|24377739|gb|AAN59035.1|  hypothetical protein; possible permea...   117   8e-25 

 gi|28898000|ref|NP_797605.1|  hypothetical protein VP1226 [Vibrio...   117   9e-25 

 gi|35211835|dbj|BAC89212.1|  glr1271 [Gloeobacter violaceus PCC 7...   116   1e-24 

 gi|21110406|gb|AAM38833.1|  conserved hypothetical protein [Xanth...   116   1e-24 

 gi|16263060|ref|NP_435853.1|  hypothetical protein SMa1122 [Sinor...   116   1e-24 

 gi|60493370|emb|CAH08156.1|  putative membrane protein [Bacteroid...   116   1e-24 

 gi|57168778|ref|ZP_00367909.1|  permease protein, putative [Campy...   116   1e-24 

 gi|53713663|ref|YP_099655.1|  putative ABC transporter permease p...   116   1e-24 

 gi|56479326|ref|YP_160915.1|  hypothetical protein ebA6805 [Azoar...   116   1e-24 

 gi|60493369|emb|CAH08155.1|  putative ABC transport system, membr...   116   1e-24 

 gi|48870823|ref|ZP_00323541.1|  COG1136: ABC-type antimicrobial p...   116   2e-24 

 gi|20520735|emb|CAD30925.1|  putative integral membrane protein [...   116   2e-24 

 gi|48780682|ref|ZP_00277376.1|  COG0577: ABC-type antimicrobial p...   115   2e-24 

 gi|15893817|ref|NP_347166.1|  Predicted permease, domain duplicat...   115   2e-24 

 gi|24377785|gb|AAN59077.1|  putative ABC transporter, membrane pr...   115   2e-24 

 gi|29375908|ref|NP_815062.1|  ABC transporter, ATP-binding/permea...   115   2e-24 

 gi|21233336|ref|NP_639253.1|  hypothetical protein XCC3913 [Xanth...   115   2e-24 

 gi|9656140|gb|AAF94780.1|  conserved hypothetical protein [Vibrio...   115   3e-24 

 gi|23464871|ref|NP_695474.1|  ABC-type transporter similar to Vex...   115   3e-24 

 gi|32476756|ref|NP_869750.1|  putative ABC transporter integral m...   115   3e-24 

 gi|46200077|ref|YP_005744.1|  ABC transporter permease protein [T...   115   3e-24 

 gi|18311669|ref|NP_558336.1|  hypothetical protein PAE0039 [Pyrob...   115   3e-24 

 gi|48845919|ref|ZP_00300189.1|  COG0577: ABC-type antimicrobial p...   115   3e-24 

 gi|48826663|ref|ZP_00287851.1|  COG0577: ABC-type antimicrobial p...   115   3e-24 

 gi|46190779|ref|ZP_00206566.1|  COG0577: ABC-type antimicrobial p...   115   3e-24 

 gi|4098079|gb|AAD09219.1|  ABC transporter membrane protein subun...   114   4e-24 

 gi|48772588|ref|ZP_00276930.1|  COG0577: ABC-type antimicrobial p...   114   6e-24 

 gi|15594427|ref|NP_212215.1|  hypothetical protein BB0081 [Borrel...   114   6e-24 

 gi|52078904|ref|YP_077695.1|  hypothetical membrane protein [Baci...   114   6e-24 

 gi|46131701|ref|ZP_00170069.2|  COG0577: ABC-type antimicrobial p...   113   7e-24 

 gi|46135604|ref|ZP_00163121.2|  COG0577: ABC-type antimicrobial p...   113   7e-24 

 gi|23113205|ref|ZP_00098602.1|  COG0577: ABC-type antimicrobial p...   113   8e-24 

 gi|29376398|ref|NP_815552.1|  permease, putative [Enterococcus fa...   113   8e-24 

 gi|2822200|gb|AAB97962.1|  ATP-binding cassette transporter-like ...   113   8e-24 

 gi|54028253|ref|ZP_00360406.1|  COG0577: ABC-type antimicrobial p...   113   9e-24 

 gi|35212995|dbj|BAC90368.1|  gll2427 [Gloeobacter violaceus PCC 7...   113   1e-23 

 gi|25010661|ref|NP_735056.1|  hypothetical protein gbs0596 [Strep...   113   1e-23 

 gi|35212044|dbj|BAC89420.1|  glr1479 [Gloeobacter violaceus PCC 7...   113   1e-23 

 gi|23464771|ref|NP_695374.1|  large transmembrane protein possibl...   112   2e-23 

 gi|50196947|ref|YP_052637.1|  abc transporter, permease protein [...   112   2e-23 

 gi|39997285|ref|NP_953236.1|  ABC transporter, permease protein [...   112   2e-23 

 gi|13272379|gb|AAK17129.1|  putative membrane transporter protein...   112   2e-23 

 gi|23097815|ref|NP_691281.1|  hypothetical protein OB0360 [Oceano...   112   3e-23 

 gi|46190582|ref|ZP_00121322.2|  COG0577: ABC-type antimicrobial p...   112   3e-23 

 gi|49478196|ref|YP_037464.1|  ABC transporter, permease [Bacillus...   111   4e-23 

 gi|28211548|ref|NP_782492.1|  ABC transporter ATP-binding protein...   111   4e-23 

 gi|34557888|ref|NP_907703.1|  INTEGRAL MEMBRANE PROTEIN-Permease ...   111   4e-23 

 gi|52142191|ref|YP_084638.1|  ABC transporter, permease [Bacillus...   111   5e-23 

 gi|34105249|gb|AAQ61604.1|  conserved hypothetical protein [Chrom...   110   5e-23 

 gi|29338166|gb|AAO75968.1|  putative ABC transporter permease [Ba...   110   6e-23 

 gi|60417939|dbj|BAD90606.1|  putative permease [Clostridium perfr...   110   8e-23 

 gi|45915922|ref|ZP_00194729.2|  COG0577: ABC-type antimicrobial p...   110   8e-23 

 gi|987093|emb|CAA60453.1|  orfW [Streptomyces hygroscopicus] >gi|...   110   8e-23 

 gi|53712793|ref|YP_098785.1|  hypothetical protein BF1500 [Bacter...   110   9e-23 

 gi|11496870|ref|NP_045651.1|  hypothetical protein BBJ27 [Borreli...   110   9e-23 

 gi|15903868|ref|NP_359418.1|  hypothetical protein spr1826 [Strep...   110   9e-23 

 gi|23125987|ref|ZP_00107899.1|  COG0577: ABC-type antimicrobial p...   110   1e-22 

 gi|60492376|emb|CAH07142.1|  putative ABC transporter permease co...   110   1e-22 

 gi|60493368|emb|CAH08154.1|  putative ABc transport system, membr...   110   1e-22 

 gi|48731714|ref|ZP_00265458.1|  COG0577: ABC-type antimicrobial p...   109   1e-22 

 gi|30263312|ref|NP_845689.1|  ABC transporter, permease protein [...   109   1e-22 

 gi|15895523|ref|NP_348872.1|  Predicted permease [Clostridium ace...   109   1e-22 

 gi|53685622|ref|ZP_00099199.2|  COG0577: ABC-type antimicrobial p...   109   1e-22 

 gi|695785|emb|CAA58844.1|  orf4 [Zymomonas mobilis]                    109   2e-22 

 gi|28211463|ref|NP_782407.1|  ABC transporter ATP-binding protein...   109   2e-22 

 gi|39933274|ref|NP_945550.1|  possible ABC transporter permeases ...   109   2e-22 

 gi|42781815|ref|NP_979062.1|  permease, putative [Bacillus cereus...   109   2e-22 

 gi|54029448|ref|ZP_00361589.1|  COG0577: ABC-type antimicrobial p...   109   2e-22 

 gi|53713661|ref|YP_099653.1|  putative ABC transporter permease [...   109   2e-22 

 gi|54308747|ref|YP_129767.1|  hypothetical protein PBPRA1554 [Pho...   108   2e-22 

 gi|42527357|ref|NP_972455.1|  ABC transporter, permease protein, ...   108   2e-22 

 gi|35211992|dbj|BAC89368.1|  gll1427 [Gloeobacter violaceus PCC 7...   108   3e-22 

 gi|34396435|gb|AAQ65501.1|  ABC transporter, permease protein, pu...   108   3e-22 

 gi|42525141|ref|NP_970521.1|  ABC-type antimicrobial peptide tran...   108   3e-22 

 gi|24216411|ref|NP_713892.1|  hypothetical protein LA3712 [Leptos...   108   4e-22 

 gi|15901836|ref|NP_346440.1|  hypothetical protein SP2013 [Strept...   108   4e-22 

 gi|30249376|ref|NP_841446.1|  DUF214 [Nitrosomonas europaea ATCC ...   108   4e-22 

 gi|45656417|ref|YP_000503.1|  hypothetical protein LIC10519 [Lept...   108   4e-22 

 gi|48862086|ref|ZP_00315984.1|  COG0577: ABC-type antimicrobial p...   107   5e-22 

 gi|57234374|ref|YP_181582.1|  ABC transporter, permease protein, ...   107   5e-22 

 gi|53713662|ref|YP_099654.1|  putative ABC transporter permease [...   107   7e-22 

 gi|52007911|ref|ZP_00335288.1|  COG0577: ABC-type antimicrobial p...   107   8e-22 

 gi|23129990|ref|ZP_00111811.1|  COG0577: ABC-type antimicrobial p...   107   8e-22 

 gi|58579781|ref|YP_198797.1|  hypothetical protein XOO0158 [Xanth...   107   9e-22 

 gi|10957500|ref|NP_051589.1|  hypothetical protein DRB0050 [Deino...   107   9e-22 

 gi|55275350|ref|YP_133872.1|  putative ABC-type permease [uncultu...   106   1e-21 

 gi|37679616|ref|NP_934225.1|  ABC-type antimicrobial peptide tran...   106   1e-21 

 gi|24985411|gb|AAN69330.1|  ABC transporter, permease protein, pu...   106   1e-21 

 gi|15900509|ref|NP_345113.1|  transmembrane protein Vexp3 [Strept...   106   1e-21 

 gi|56750336|ref|YP_171037.1|  ABC transporter permease protein [S...   106   1e-21 

 gi|52008131|ref|ZP_00335508.1|  COG0577: ABC-type antimicrobial p...   106   2e-21 

 gi|29468278|gb|AAO85481.1|  lipoprotein releasing factor [Borreli...   106   2e-21 

 gi|51891816|ref|YP_074507.1|  ABC transporter permease protein [S...   105   2e-21 

 gi|23346861|gb|AAN29043.1|  ABC transporter, permease protein [Br...   105   2e-21 

 gi|22002528|gb|AAM82679.1|  DevC [Synechococcus sp. PCC 7942] >gi...   105   2e-21 

 gi|56678117|gb|AAV94783.1|  ABC transporter, permease protein [Si...   105   4e-21 

 gi|21401279|ref|NP_657264.1|  DUF214, Predicted permease [Bacillu...   104   4e-21 

 gi|46140477|ref|ZP_00203624.1|  COG0577: ABC-type antimicrobial p...   104   4e-21 

 gi|27362318|gb|AAO11173.1|  ABC-type antimicrobial peptide transp...   103   7e-21 

 gi|56479010|ref|YP_160599.1|  ABC transporter, permease protein [...   103   9e-21 

 gi|16077442|ref|NP_388256.1|  hypothetical protein BSU03740 [Baci...   103   1e-20 

 gi|47564488|ref|ZP_00235533.1|  COG0577:ABC-type transport system...   103   1e-20 

 gi|29338167|gb|AAO75969.1|  putative ABC-transporter permease pro...   103   1e-20 

 gi|16119681|ref|NP_396387.1|  hypothetical protein AGR_pAT_665 [A...   103   1e-20 

 gi|32487246|emb|CAD91213.1|  putative ABC transporter, Dbv18 [Non...   103   1e-20 

 gi|2967528|gb|AAC05799.1|  Orf217 [Buchnera aphidicola]                103   1e-20 

 gi|2673752|emb|CAA05976.1|  membrane spanning subunit [Anabaena v...   102   2e-20 

 gi|29609091|dbj|BAC73143.1|  putative ABC transporter transmembra...   102   2e-20 

 gi|46140589|ref|ZP_00152171.2|  COG4591: ABC-type transport syste...   101   3e-20 

 gi|35211983|dbj|BAC89359.1|  glr1418 [Gloeobacter violaceus PCC 7...   101   3e-20 

 gi|17939036|ref|NP_535824.1|  ABC transporter, membrane spanning ...   101   3e-20 

 gi|45656964|ref|YP_001050.1|  ABC transporter integral membrane p...   101   3e-20 

 gi|23128822|ref|ZP_00110661.1|  COG0577: ABC-type antimicrobial p...   101   3e-20 

 gi|1490223|emb|CAA67986.1|  devC [Anabaena sp.] >gi|25534659|pir|...   101   3e-20 

 gi|46190780|ref|ZP_00206567.1|  COG0577: ABC-type antimicrobial p...   101   3e-20 

 gi|48826511|ref|ZP_00287715.1|  COG0577: ABC-type antimicrobial p...   101   3e-20 

 gi|22535380|gb|AAM97298.1|  FeeE [uncultured bacterium]                101   4e-20 

 gi|51572912|gb|AAU06937.1|  conserved hypothetical protein [Borre...   101   4e-20 

 gi|24215682|ref|NP_713163.1|  hypothetical protein LA2983 [Leptos...   101   5e-20 

 gi|49482540|ref|YP_039764.1|  putative membrane protein [Staphylo...   100   6e-20 

 gi|51572910|gb|AAU06935.1|  hypothetical protein BG0077 [Borrelia...   100   7e-20 

 gi|21233337|ref|NP_639254.1|  hypothetical protein XCC3914 [Xanth...   100   7e-20 

 gi|48859946|ref|ZP_00313874.1|  COG0577: ABC-type antimicrobial p...   100   8e-20 

 gi|24427170|emb|CAD55331.1|  putative ABC transporter integral me...   100   8e-20 

 gi|21673386|ref|NP_661451.1|  ABC-type export system, membrane pr...   100   8e-20 

 gi|19704684|ref|NP_604246.1|  ABC transporter permease protein [F...   100   9e-20 

 gi|53798147|ref|ZP_00358744.1|  COG0577: ABC-type antimicrobial p...   100   1e-19 

 gi|54032296|ref|ZP_00364428.1|  COG0577: ABC-type antimicrobial p...   100   1e-19 

 gi|48854484|ref|ZP_00308646.1|  COG0577: ABC-type antimicrobial p...   100   1e-19 

 gi|25533348|pir||AF2427  hypothetical protein alr4974 [imported] ...   100   1e-19 

 gi|15895988|ref|NP_349337.1|  Predicted permease [Clostridium ace...   100   1e-19 

 gi|57651232|ref|YP_185197.1|  ABC transporter, permease protein [...   100   1e-19 

 gi|46318352|ref|ZP_00218815.1|  COG0577: ABC-type antimicrobial p...   100   1e-19 

 gi|21110407|gb|AAM38834.1|  conserved hypothetical protein [Xanth...   100   1e-19 

 gi|57240581|ref|ZP_00368530.1|  probable ABC transport system per...   100   1e-19 

 gi|14246076|dbj|BAB56470.1|  similar to ABC transporter permease ...   100   2e-19 

 gi|24377471|gb|AAN58790.1|  putative ABC transporter, permease pr...    99   2e-19 

 gi|25010659|ref|NP_735054.1|  hypothetical protein gbs0594 [Strep...    99   2e-19 

 gi|49243632|emb|CAG42056.1|  putative membrane protein [Staphyloc...    99   2e-19 

 gi|46562224|ref|YP_009063.1|  ABC transporter, permease protein, ...    99   2e-19 

 gi|23464870|ref|NP_695473.1|  ATP binding protein of ABC transpor...    99   2e-19 

 gi|15603689|ref|NP_246763.1|  hypothetical protein PM1824 [Pasteu...    99   3e-19 

 gi|45527667|ref|ZP_00178867.1|  COG0577: ABC-type antimicrobial p...    99   3e-19 

 gi|50954147|ref|YP_061435.1|  integral membrane protein [Leifsoni...    99   3e-19 

 gi|16800609|ref|NP_470877.1|  hypothetical protein lin1541 [Liste...    99   3e-19 

 gi|53764648|ref|ZP_00160587.2|  COG0577: ABC-type antimicrobial p...    99   3e-19 

 gi|46132323|ref|ZP_00202874.1|  COG0577: ABC-type antimicrobial p...    99   3e-19 

 gi|46113626|ref|ZP_00183173.2|  COG0577: ABC-type antimicrobial p...    99   3e-19 

 gi|16804544|ref|NP_466029.1|  hypothetical protein lmo2506 [Liste...    99   4e-19 

 gi|53712800|ref|YP_098792.1|  ABC transporter permease [Bacteroid...    98   4e-19 

 gi|23112539|ref|ZP_00098011.1|  COG0577: ABC-type antimicrobial p...    98   4e-19 

 gi|25532823|pir||AF1907  hypothetical protein all0808 [imported] ...    98   4e-19 

 gi|987094|emb|CAA60454.1|  membrane transport protein [Streptomyc...    98   4e-19 

 gi|23129026|ref|ZP_00110860.1|  COG0577: ABC-type antimicrobial p...    98   4e-19 

 gi|16801711|ref|NP_471979.1|  ftsX [Listeria innocua Clip11262] >...    98   4e-19 

 gi|46908678|ref|YP_015067.1|  cell division ABC transporter, perm...    98   5e-19 

 gi|23127807|ref|ZP_00109668.1|  COG0577: ABC-type antimicrobial p...    98   5e-19 

 gi|52082059|ref|YP_080850.1|  cell-division protein [Bacillus lic...    98   5e-19 

 gi|45507655|ref|ZP_00159998.1|  COG0577: ABC-type antimicrobial p...    98   6e-19 

 gi|15807941|ref|NP_285602.1|  hypothetical protein DRA0279 [Deino...    98   6e-19 

 gi|53722953|ref|YP_111938.1|  putative ABC transport system, memb...    97   6e-19 

 gi|24372445|ref|NP_716487.1|  hypothetical protein SO0856 [Shewan...    97   6e-19 

 gi|16119360|ref|NP_396066.1|  hypothetical protein AGR_pAT_194 [A...    97   7e-19 

 gi|17549684|ref|NP_523024.1|  PROBABLE TRANSMEMBRANE PROTEIN [Ral...    97   8e-19 

 gi|25535424|pir||AI2261  hypothetical protein alr3648 [imported] ...    97   8e-19 

 gi|46120941|ref|ZP_00201862.1|  COG3127: Predicted ABC-type trans...    97   8e-19 

 gi|53716757|ref|YP_104983.1|  ABC transporter, permease protein [...    97   8e-19 

 gi|46907734|ref|YP_014123.1|  ABC transporter, permease protein [...    97   9e-19 

 gi|56461160|ref|YP_156441.1|  ABC-type transport system, permease...    97   9e-19 

 gi|29376400|ref|NP_815554.1|  permease, putative [Enterococcus fa...    97   9e-19 

 gi|22298186|ref|NP_681433.1|  devC-like ABC transporter permease ...    97   1e-18 

 gi|47097203|ref|ZP_00234767.1|  ABC transporter, permease protein...    97   1e-18 

 gi|16803546|ref|NP_465031.1|  hypothetical protein lmo1506 [Liste...    97   1e-18 

 gi|16332184|ref|NP_442912.1|  ABC-transporter DevC-like protein [...    97   1e-18 

 gi|47575327|ref|ZP_00245362.1|  COG0577: ABC-type antimicrobial p...    96   2e-18 

 gi|27375572|ref|NP_767101.1|  probable ABC transporter permease p...    96   2e-18 

 gi|60417941|dbj|BAD90608.1|  putative ABC transport system permea...    96   2e-18 

 gi|39997509|ref|NP_953460.1|  membrane protein, putative [Geobact...    96   2e-18 

 gi|48847887|ref|ZP_00302135.1|  COG0577: ABC-type antimicrobial p...    96   2e-18 

 gi|23129027|ref|ZP_00110861.1|  COG0577: ABC-type antimicrobial p...    96   2e-18 

 gi|26246905|ref|NP_752945.1|  hypothetical protein c1016 [Escheri...    96   2e-18 

 gi|23100593|ref|NP_694060.1|  ABC transporter permease [Oceanobac...    96   2e-18 

 gi|41410304|ref|NP_963140.1|  hypothetical protein MAP4206c [Myco...    96   2e-18 

 gi|21674047|ref|NP_662112.1|  hypothetical protein CT1222 [Chloro...    95   2e-18 

 gi|53761956|ref|ZP_00167722.2|  COG0577: ABC-type antimicrobial p...    95   3e-18 

 gi|60492379|emb|CAH07145.1|  putative ABC transporter permease co...    95   3e-18 

 gi|15076247|emb|CAC47800.1|  HYPOTHETICAL TRANSMEMBRANE PROTEIN [...    95   3e-18 

 gi|27383098|ref|NP_774627.1|  hypothetical protein bll7987 [Brady...    95   3e-18 

 gi|31792178|ref|NP_854671.1|  PROBABLE ADHESION COMPONENT TRANSPO...    95   4e-18 

 gi|23471071|ref|ZP_00126402.1|  COG0577: ABC-type antimicrobial p...    95   4e-18 

 gi|34396793|gb|AAQ65858.1|  ABC transporter, permease protein, pu...    95   4e-18 

 gi|53712796|ref|YP_098788.1|  ABC transporter permease [Bacteroid...    95   5e-18 

 gi|58579782|ref|YP_198798.1|  hypothetical protein XOO0159 [Xanth...    95   5e-18 

 gi|42527026|ref|NP_972124.1|  permease, putative [Treponema denti...    95   5e-18 

 gi|51891993|ref|YP_074684.1|  ABC transporter permease protein [S...    94   5e-18 

 gi|21110023|gb|AAM38484.1|  ABC transporter permease [Xanthomonas...    94   8e-18 

 gi|28377221|ref|NP_784113.1|  ABC transporter, permease protein [...    94   9e-18 

 gi|15828536|ref|NP_325896.1|  ABC TRANSPORTER PERMEASE PROTEIN [M...    94   9e-18 

 gi|53713334|ref|YP_099326.1|  putative ABC transporter permease [...    94   1e-17 

 gi|23114069|ref|ZP_00099393.1|  COG0577: ABC-type antimicrobial p...    93   1e-17 

 gi|39996362|ref|NP_952313.1|  ABC transporter, permease protein [...    93   1e-17 

 gi|60493014|emb|CAH07794.1|  putative transporter permease protei...    93   1e-17 

 gi|46134820|ref|ZP_00158755.2|  COG0577: ABC-type antimicrobial p...    93   1e-17 

 gi|53757872|gb|AAU92163.1|  ABC-transporter permease protein, put...    93   1e-17 

 gi|48826661|ref|ZP_00287849.1|  COG0577: ABC-type antimicrobial p...    93   1e-17 

 gi|16080578|ref|NP_391405.1|  cell-division protein [Bacillus sub...    93   2e-17 

 gi|23124286|ref|ZP_00106284.1|  COG0577: ABC-type antimicrobial p...    93   2e-17 

 gi|33862861|ref|NP_894421.1|  ABC-transporter, membrane spanning ...    93   2e-17 

 gi|27468040|ref|NP_764677.1|  hypothetical protein SE1122 [Staphy...    93   2e-17 

 gi|15607214|ref|NP_214586.1|  PROBABLE GLUTAMINE-TRANSPORT TRANSM...    92   2e-17 

 gi|38234858|ref|NP_940625.1|  Putative ABC transport system integ...    92   2e-17 

 gi|48765857|ref|ZP_00270407.1|  COG0577: ABC-type antimicrobial p...    92   2e-17 

 gi|53712887|ref|YP_098879.1|  putative ABC transporter permease [...    92   2e-17 

 gi|56421635|ref|YP_148953.1|  cell-division protein [Geobacillus ...    92   3e-17 

 gi|48825773|ref|ZP_00287011.1|  COG0577: ABC-type antimicrobial p...    92   3e-17 

 gi|53797633|ref|ZP_00358398.1|  COG0577: ABC-type antimicrobial p...    92   3e-17 

 gi|15902711|ref|NP_358261.1|  Cell division protein FtsX [Strepto...    92   4e-17 

 gi|16126329|ref|NP_420893.1|  hypothetical protein CC2090 [Caulob...    92   4e-17 

 gi|29338841|gb|AAO76640.1|  conserved hypothetical protein [Bacte...    92   4e-17 

 gi|45916811|ref|ZP_00195843.2|  COG3127: Predicted ABC-type trans...    91   5e-17 

 gi|53712794|ref|YP_098786.1|  ABC transporter permease [Bacteroid...    91   5e-17 

 gi|15672852|ref|NP_267026.1|  ABC transporter permease protein [L...    91   5e-17 

 gi|15900651|ref|NP_345255.1|  cell division ABC transporter, perm...    91   6e-17 

 gi|15672955|ref|NP_267129.1|  cell division protein [Lactococcus ...    91   6e-17 

 gi|37963681|gb|AAR05977.1|  ORFY [Sphingomonas paucimobilis]            91   6e-17 

 gi|15894812|ref|NP_348161.1|  Predicted permease [Clostridium ace...    91   6e-17 

 gi|33865620|ref|NP_897179.1|  ABC-transporter, membrane spanning ...    90   8e-17 

 gi|25530284|pir||AB2474  hypothetical protein all5346 [imported] ...    90   8e-17 

 gi|51245607|ref|YP_065491.1|  hypothetical protein DP1755 [Desulf...    90   8e-17 

 gi|16803102|ref|NP_464587.1|  hypothetical protein lmo1062 [Liste...    90   8e-17 

 gi|60492377|emb|CAH07143.1|  putative ABC transporter permease co...    90   9e-17 

 gi|31789400|gb|AAP58516.1|  putative membrane component protein [...    90   1e-16 

 gi|53686272|ref|ZP_00344926.1|  COG0577: ABC-type antimicrobial p...    90   1e-16 

 gi|13473669|ref|NP_105237.1|  hypothetical protein mll4345 [Mesor...    90   1e-16 

 gi|42784335|ref|NP_981582.1|  cell division ABC transporter, perm...    90   1e-16 

 gi|47530728|ref|YP_022077.1|  cell division abc transporter, perm...    90   1e-16 

 gi|23129054|ref|ZP_00110888.1|  COG0577: ABC-type antimicrobial p...    90   1e-16 

 gi|23335401|ref|ZP_00120637.1|  COG1136: ABC-type antimicrobial p...    90   1e-16 

 gi|6911998|emb|CAB72214.1|  putative cell division protein [Strep...    90   1e-16 

 gi|23465931|ref|NP_696534.1|  large protein with N-terminal simil...    90   1e-16 

 gi|24377699|gb|AAN58999.1|  putative cell-division protein FtsX [...    90   1e-16 

 gi|46321983|ref|ZP_00222356.1|  COG0577: ABC-type antimicrobial p...    90   2e-16 

 gi|52009308|ref|ZP_00336672.1|  COG3127: Predicted ABC-type trans...    89   2e-16 

 gi|53765495|ref|ZP_00161853.2|  COG0577: ABC-type antimicrobial p...    89   2e-16 

 gi|35211047|dbj|BAC88427.1|  gll0486 [Gloeobacter violaceus PCC 7...    89   2e-16 

 gi|24375188|ref|NP_719231.1|  ABC transporter, permease protein [...    89   2e-16 

 gi|51245634|ref|YP_065518.1|  similar to lipoprotein releasing sy...    89   3e-16 

 gi|29609966|dbj|BAC74014.1|  putative ABC-type antimicrobial pept...    89   3e-16 

 gi|30023218|ref|NP_834849.1|  Cell division protein ftsX [Bacillu...    89   3e-16 

 gi|17983900|gb|AAL53041.1|  hypothetical transmembrane oxidoreduc...    89   3e-16 

 gi|48892754|ref|ZP_00326087.1|  COG0577: ABC-type antimicrobial p...    88   4e-16 

 gi|17936556|ref|NP_533346.1|  hypothetical protein Atu2681 [Agrob...    88   4e-16 

 gi|59711492|ref|YP_204268.1|  ABC transporter permease protein [V...    88   4e-16 

 gi|60492382|emb|CAH07148.1|  putative ABC transporter permease co...    88   4e-16 

 gi|42519858|ref|NP_965788.1|  ABC transporter permease component ...    88   5e-16 

 gi|53712795|ref|YP_098787.1|  hypothetical protein BF1502 [Bacter...    88   6e-16 

 gi|45507937|ref|ZP_00160278.1|  COG0577: ABC-type antimicrobial p...    88   6e-16 

 gi|39996051|ref|NP_952002.1|  ABC transporter, permease protein, ...    88   6e-16 

 gi|28373146|ref|NP_783744.1|  ABC transporter-associated permease...    88   6e-16 

 gi|48866254|ref|ZP_00320110.1|  COG0577: ABC-type antimicrobial p...    87   7e-16 

 gi|33237798|gb|AAP99865.1|  DevC-like ABC transporter permease co...    87   7e-16 

 gi|28900728|ref|NP_800383.1|  putative permease [Vibrio parahaemo...    87   7e-16 

 gi|53712799|ref|YP_098791.1|  hypothetical protein BF1506 [Bacter...    87   7e-16 

 gi|21904181|gb|AAM79063.1|  putative cell-division protein [Strep...    87   8e-16 

 gi|60492378|emb|CAH07144.1|  putative ABC transporter permease co...    87   8e-16 

 gi|50591750|ref|ZP_00333053.1|  COG2177: Cell division protein [S...    87   9e-16 

 gi|50913899|ref|YP_059871.1|  Cell division protein FtsX [Strepto...    87   1e-15 

 gi|23126910|ref|ZP_00108791.1|  COG0577: ABC-type antimicrobial p...    87   1e-15 

 gi|28896312|ref|NP_802662.1|  putative cell division protein [Str...    87   1e-15 

 gi|25531533|pir||AD2137  ABC transporter permease protein all2651...    87   1e-15 

 gi|29607288|dbj|BAC71347.1|  putative ABC transporter integral me...    87   1e-15 

 gi|21230040|ref|NP_635957.1|  ABC transporter permease [Xanthomon...    86   1e-15 

 gi|16801532|ref|NP_471800.1|  hypothetical protein lin2470 [Liste...    86   1e-15 

 gi|56459339|ref|YP_154620.1|  Cell division protein FtsX [Idiomar...    86   2e-15 

 gi|57865388|ref|YP_189510.1|  ABC transporter, permease protein [...    86   2e-15 

 gi|48836909|ref|ZP_00293904.1|  COG2177: Cell division protein [T...    86   2e-15 

 gi|48864254|ref|ZP_00318147.1|  COG0577: ABC-type antimicrobial p...    86   2e-15 

 gi|27468858|ref|NP_765495.1|  hypothetical protein SE1940 [Staphy...    86   2e-15 

 gi|55738870|gb|AAV62511.1|  ABC transporter permease protein [Str...    86   2e-15 

 gi|46140673|ref|ZP_00203703.1|  COG3127: Predicted ABC-type trans...    86   2e-15 

 gi|53612145|ref|ZP_00342482.1|  COG0577: ABC-type antimicrobial p...    85   2e-15 

 gi|56460867|ref|YP_156148.1|  ABC-type transport system, permease...    85   3e-15 

 gi|46205707|ref|ZP_00048178.2|  COG0577: ABC-type antimicrobial p...    85   3e-15 

 gi|53712803|ref|YP_098795.1|  hypothetical protein BF1510 [Bacter...    85   3e-15 

 gi|16804409|ref|NP_465894.1|  hypothetical protein lmo2371 [Liste...    85   4e-15 

 gi|53687638|ref|ZP_00108219.2|  COG0577: ABC-type antimicrobial p...    85   4e-15 

 gi|16119359|ref|NP_396065.1|  hypothetical protein AGR_pAT_bx7 [A...    85   4e-15 

 gi|61100113|ref|ZP_00375572.1|  ABC-transporter permease protein ...    84   6e-15 

 gi|61100523|ref|ZP_00375981.1|  ABC transporter permease protein ...    84   6e-15 

 gi|45508143|ref|ZP_00160483.1|  COG0577: ABC-type antimicrobial p...    84   6e-15 

 gi|51245605|ref|YP_065489.1|  hypothetical protein DP1753 [Desulf...    84   7e-15 

 gi|33863841|ref|NP_895401.1|  possible membrane permease or ABC t...    84   7e-15 

 gi|33861306|ref|NP_892867.1|  ABC-transporter, membrane spanning ...    84   8e-15 

 gi|46908542|ref|YP_014931.1|  ABC transporter, permease protein [...    84   9e-15 

 gi|53689214|ref|ZP_00064163.2|  COG0577: ABC-type antimicrobial p...    84   1e-14 

 gi|48865631|ref|ZP_00319490.1|  COG0577: ABC-type antimicrobial p...    84   1e-14 

 gi|53686098|ref|ZP_00100069.2|  COG0577: ABC-type antimicrobial p...    84   1e-14 

 gi|34105039|gb|AAQ61395.1|  probable oxidoreductase [Chromobacter...    84   1e-14 

 gi|25530162|pir||AB2341  hypothetical protein alr4281 [imported] ...    83   1e-14 

 gi|15893789|ref|NP_347138.1|  Cell division protein (ftsX) [Clost...    83   1e-14 

 gi|53713664|ref|YP_099656.1|  putative ABC-transporter permease p...    83   1e-14 

 gi|29376309|ref|NP_815463.1|  cell division ABC transporter, perm...    83   2e-14 

 gi|39937868|ref|NP_950144.1|  predicted permease [Rhodopseudomona...    83   2e-14 

 gi|42560593|ref|NP_975044.1|  Predicted permease [Mycoplasma myco...    83   2e-14 

 gi|10176225|dbj|BAB07320.1|  cell-division protein [Bacillus halo...    83   2e-14 

 gi|29608764|dbj|BAC72817.1|  putative cell division protein [Stre...    82   2e-14 

 gi|48825842|ref|ZP_00287079.1|  COG0577: ABC-type antimicrobial p...    82   3e-14 

 gi|60493371|emb|CAH08157.1|  putative membrane protein [Bacteroid...    82   3e-14 

 gi|46114005|ref|ZP_00184233.2|  COG0577: ABC-type antimicrobial p...    82   3e-14 

 gi|23465748|ref|NP_696351.1|  FtsX-like protein involved in cell ...    82   3e-14 

 gi|47564385|ref|ZP_00235430.1|  ABC transporter permease protein ...    82   3e-14 

 gi|32475164|ref|NP_868158.1|  exporter subunit devC-putative ABC ...    82   4e-14 

 gi|23099947|ref|NP_693413.1|  cell-division protein [Oceanobacill...    82   4e-14 

 gi|48861889|ref|ZP_00315788.1|  COG0577: ABC-type antimicrobial p...    82   5e-14 

 gi|23474714|ref|ZP_00130006.1|  COG0577: ABC-type antimicrobial p...    81   5e-14 

 gi|42519785|ref|NP_965715.1|  ABC transporter permease component ...    81   5e-14 

 gi|28212089|ref|NP_783033.1|  cell division protein ftsX [Clostri...    81   5e-14 

 gi|48837536|ref|ZP_00294516.1|  COG0577: ABC-type antimicrobial p...    81   5e-14 

 gi|49478092|ref|YP_037331.1|  ABC transporter, permease [Bacillus...    81   5e-14 

 gi|32474619|ref|NP_867613.1|  conserved hypothetical protein-puta...    81   6e-14 

 gi|42782322|ref|NP_979569.1|  ABC transporter, permease protein, ...    81   6e-14 

 gi|46190860|ref|ZP_00121021.2|  COG2177: Cell division protein [B...    81   6e-14 

 gi|58338087|ref|YP_194672.1|  putative ABC transporter permease p...    81   6e-14 

 gi|52142300|ref|YP_084532.1|  ABC transporter, permease [Bacillus...    81   7e-14 









Alignments

>gi|53759518|ref|ZP_00172493.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Methylobacillus flagellatus
           KT]
          Length = 421

 Score =  334 bits (856), Expect = 4e-90
 Identities = 158/415 (38%), Positives = 242/415 (58%), Gaps = 3/415 (0%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           +P  L +GLR++R +RR   +S IS+ S IGI LGVA LIV LS MNGF+ EL NRIL V
Sbjct: 7   LPFELFVGLRYTRAKRRNHFISFISLTSMIGIGLGVAALIVVLSVMNGFQEELRNRILGV 66

Query: 63  VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 122
             H +I   D    +W+     V+  P + AAAPY+   G++    +++   ++GV P  
Sbjct: 67  ASHLQITGPDNVLEDWRSLEQKVKGAPHVQAAAPYVMAQGMLSFSQSVQGAIIRGVLPDA 126

Query: 123 EQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP 182
           E +++ L S ++    ++ K GE  +++G  +A +L V  GD V +M P        + P
Sbjct: 127 EDKVAELGSHMRAGRLQDLKPGEFGVVLGAELAQSLGVVLGDKVVLMAPQGQFTPTGVVP 186

Query: 183 KRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
           +  +  V G+ ++   + D   A+I L DA +   MG +VSG+ LK+ D+FNA  + R  
Sbjct: 187 RIKQFTVVGVFEIGMFEYDSGLALIHLDDAARLYRMGENVSGVRLKLDDLFNAPAVARQL 246

Query: 242 GEVTN--SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           GE        YI  W   +   +R IQM + +M++ + L++ VA FNIVSTLVMAV DK 
Sbjct: 247 GERLMGTGNYYISDWTQQHANFFRAIQMEKRVMFIILALIVAVAAFNIVSTLVMAVTDKR 306

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA++RT G     I  IF+  G L G+ G++ G   GV+++L +  ++  IE++ G Q
Sbjct: 307 ADIAIMRTFGVSPRSIMQIFIVQGALIGMIGTVAGAFFGVLIALNIDTVVPMIERMFGVQ 366

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           FL+ D+Y+I  LPS L W DV  ++V + +LSLLA+ YP+ RA+ ++PA  L  +
Sbjct: 367 FLAKDVYYISDLPSRLLWSDVTVIVVLSFVLSLLATLYPSWRAAKVNPAEALRYE 421



>gi|53730437|ref|ZP_00348792.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Dechloromonas aromatica
           RCB]
          Length = 415

 Score =  331 bits (849), Expect = 2e-89
 Identities = 158/415 (38%), Positives = 249/415 (60%), Gaps = 1/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           MA+P  LLIGLR++R +RR   +S IS+IS +GI LGVA LIV LS MNGF++EL  RIL
Sbjct: 1   MALPYELLIGLRYTRAKRRNHFISFISLISMLGIGLGVAALIVVLSVMNGFQKELRTRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V  H +I  +     NWQ   +   K P + A+AP++   G+      ++   V+G+ P
Sbjct: 61  GVASHIQITGISGELPNWQAVAEQAMKHPEVRASAPFVQSQGMFTVDGTVKGTIVRGILP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            QE R++     +Q  +  + + GE  +++G  +A +L+V  GD V+++ P        +
Sbjct: 121 DQEDRVADFRKTIQSGSLDDLRPGEFGVVLGADLARSLRVFTGDKVTLIAPQGTVTPAGV 180

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+     V GI ++   + D   A+I L DAQ+   M   VSG+ LK+ D+F A ++ R
Sbjct: 181 VPRLKSFKVVGIFEVGMYEYDSGLALINLEDAQKLYQMEDRVSGVRLKVDDLFQAPRIAR 240

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           +     ++  Y+  W  ++   +R +Q+ + +M++ + L++ VA FN+VSTLVMAV DK 
Sbjct: 241 ELVRYIDADAYLNDWTKSHANFFRAVQIEKNMMFIILSLIVAVAAFNLVSTLVMAVTDKQ 300

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLGA+   I  IFV  G L G  G   G++ GV+++L +  ++ +IEK++G  
Sbjct: 301 ADIAILRTLGARPLSIMGIFVIQGALVGFIGLGLGIVGGVLLALNIDVVVPFIEKVLGVH 360

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           FLS ++Y+I  LPSEL W DV+ V + A +L+LLA+ YP+ +AS ++PA  L  +
Sbjct: 361 FLSKEVYYISDLPSELQWSDVWGVTLIAFVLALLATLYPSWKASRVNPAEALRYE 415



>gi|16129081|ref|NP_415636.1|   putative kinase [Escherichia coli K12]
 gi|1787362|gb|AAC74202.1|   putative kinase; transport protein of outer membrane lipoproteins
           (ABC superfamily, membrane) [Escherichia coli K12]
 gi|4062690|dbj|BAA35938.1|   Hypothetical protein HI1548 [Escherichia coli K12]
 gi|7449108|pir||C64856   probable permease ycfW - Escherichia coli (strain K-12)
 gi|12230915|sp|P75958|LOLE_ECOLI   Lipoprotein releasing system transmembrane protein lolE
          Length = 414

 Score =  331 bits (848), Expect = 3e-89
 Identities = 414/414 (100%), Positives = 414/414 (100%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL
Sbjct: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP
Sbjct: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM
Sbjct: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD
Sbjct: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
           AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG
Sbjct: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF
Sbjct: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ
Sbjct: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414



>gi|9949086|gb|AAG06374.1|   conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|11347965|pir||C83271   conserved hypothetical protein PA2986 [imported] - Pseudomonas
           aeruginosa (strain PAO1)
 gi|15598182|ref|NP_251676.1|   hypothetical protein PA2986 [Pseudomonas aeruginosa PAO1]
          Length = 433

 Score =  329 bits (844), Expect = 9e-89
 Identities = 147/415 (35%), Positives = 244/415 (58%), Gaps = 2/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL   IGLR++R +RR   +S IS+ S IG+ALGV  +I+ LS MNGF++E+  RIL
Sbjct: 20  MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 79

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VPH  I A  QP  +WQ   +   +   +  AAP+    G++    N+  + V G++P
Sbjct: 80  GMVPHATISAA-QPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 138

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           Q+E+++S +   +   +  + K GE  I++G+  A    V  GD +++++P +      +
Sbjct: 139 QEERKVSIVGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGI 198

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLVR 239
            P+  R  +  + ++  +LD+S A+I +ADA Q L      V  + L++ D++ + ++  
Sbjct: 199 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 258

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
              +          W  T G ++  ++M + ++ L ++L+I VA FNI++TL+M V DK 
Sbjct: 259 KVVKELGQGFRSSDWTRTQGSLFNAMKMEKTMIGLLLLLIIAVAAFNIIATLIMVVADKR 318

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLGA    I AIF+  G + G+ G++ G ++GV  +L +T +I+ IE+L+GH+
Sbjct: 319 TDIAILRTLGATPRQIMAIFMVQGTVIGVIGTVIGGVLGVFAALNITGMIDRIERLVGHK 378

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             SSD+YFI++LPS+L  LDV  +   ALL+S LA+ YP+ RA+   PA  L  +
Sbjct: 379 VFSSDVYFINYLPSDLQVLDVVLICSAALLMSFLATLYPSWRAARTQPAESLRYE 433



>gi|48787803|ref|ZP_00283782.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Burkholderia fungorum
           LB400]
          Length = 417

 Score =  329 bits (843), Expect = 1e-88
 Identities = 138/418 (33%), Positives = 228/418 (54%), Gaps = 5/418 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRR---GGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M  P    IG R++R  +R    G +S I+++S  GIALGVA LIV LS MNGF++E+ +
Sbjct: 1   MKFPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  RILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           R+L+V+ H EI +      NWQ      ++   +  AAPY+    L+     +  + ++G
Sbjct: 61  RMLSVLAHVEIFSPTGSMPNWQLTAQEARQNKEVIGAAPYVEAQALLTRQDAVSGVALRG 120

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
           V P  E ++S +   ++G +      G+  I++G  +A  L V   D ++++ P      
Sbjct: 121 VEPSLEPQVSDIGKEMKGGSLNALVPGDFGIVLGADLATNLGVTVNDKITLVAPEGTITP 180

Query: 178 KLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANK 236
             M P+  +  V GI +    + D + A+I + DAQ    +  + +G+ L++TD+  A +
Sbjct: 181 AGMLPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLP-APTGVRLRLTDMQRAPE 239

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           +        +  +YI+ W       +  +Q+ + +M++ + L+I VA FN+VS+LVM V 
Sbjct: 240 VAHQLARSLSGDLYIRDWTQQNKTWFSAVQIEKRMMFIILTLIIAVAAFNLVSSLVMTVT 299

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
           +K  DIA+LRTLGA+ G I  IFV  G+  G  G+  GV +G +++  +  ++  IE L+
Sbjct: 300 NKQADIAILRTLGAQPGSIMKIFVVQGVTIGFIGTATGVALGCLIAWSIPWLVPMIEHLL 359

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           G QFL   +YFI  LPSEL   DV  + + A L+S LA+ YP+ R + + PA  L  +
Sbjct: 360 GVQFLPPSVYFISELPSELIPADVARIGIIAFLMSALATLYPSWRGAKVRPAEALRYE 417



>gi|24112523|ref|NP_707033.1|   putative kinase [Shigella flexneri 2a str. 301]
 gi|24051415|gb|AAN42740.1|   putative kinase [Shigella flexneri 2a str. 301]
 gi|30062651|ref|NP_836822.1|   putative kinase [Shigella flexneri 2a str. 2457T]
 gi|30040899|gb|AAP16629.1|   putative kinase [Shigella flexneri 2a str. 2457T]
          Length = 414

 Score =  328 bits (842), Expect = 1e-88
 Identities = 410/414 (99%), Positives = 414/414 (100%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL
Sbjct: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           AVVPHGEIEAV+QPWTNWQEALD+VQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP
Sbjct: 61  AVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM
Sbjct: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           QPKRVRLH+AGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD
Sbjct: 181 QPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
           AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG
Sbjct: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGV+IGVVVSLQLTPIIEWIEKLIGHQF
Sbjct: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVVIGVVVSLQLTPIIEWIEKLIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ
Sbjct: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414



>gi|26247262|ref|NP_753302.1|   Lipoprotein releasing system transmembrane protein lolE
           [Escherichia coli CFT073]
 gi|26107663|gb|AAN79862.1|   Lipoprotein releasing system transmembrane protein lolE
           [Escherichia coli CFT073]
          Length = 414

 Score =  328 bits (842), Expect = 1e-88
 Identities = 410/414 (99%), Positives = 414/414 (100%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL
Sbjct: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           AVVPHGEIEAVDQPWTNWQEALD+VQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP
Sbjct: 61  AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM
Sbjct: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           QPKRVRLH+AGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD
Sbjct: 181 QPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
           AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG
Sbjct: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGV+IGVVVSL+LTPIIEWIEKLIGHQF
Sbjct: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVVIGVVVSLKLTPIIEWIEKLIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ
Sbjct: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414



>gi|28897753|ref|NP_797358.1|   hypothetical protein VP0979 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28805966|dbj|BAC59242.1|   conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 414

 Score =  328 bits (840), Expect = 3e-88
 Identities = 242/414 (58%), Positives = 331/414 (79%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   L+L+IG RFSR ++R  MVS IS+ STIGIA+GVAV+I+GLSAMNGFEREL +R+L
Sbjct: 1   MFSSLALMIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           +V+PHGE+E V+ P  N+ + ++   +   + AAAPY+ FTGL E G+ L+AI+V+GV+P
Sbjct: 61  SVIPHGELEGVNGPLQNYTKTMNQALQHEHVVAAAPYVRFTGLAEKGSKLKAIEVRGVDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             EQ +S++  F+  +AW+NF +G+QQ+I+G+GVA+ LKV+ GD+V++MIP +   +K+ 
Sbjct: 121 AYEQAVSSMSDFIDPEAWQNFYSGQQQVILGRGVANELKVQVGDYVTLMIPQTGGTNKVQ 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
            PKRVR+ VAG L L+GQ+DHS A++PLADAQQY+ +G  V+GI+LK  DV +A  +VR+
Sbjct: 181 APKRVRVKVAGFLTLNGQIDHSLALVPLADAQQYVRLGDGVTGISLKTDDVLDAPSIVRE 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
            G + N YVY+KSW   +G++YRDIQ++R IMYL MVLVIGVACFNIVSTL+MAVKD++ 
Sbjct: 241 VGNLVNVYVYLKSWQQQFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRAA 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           +IA+LRT+GAKDGLI+ IFVW G+ +G+FGSL G ++GV+V+L LTPII+ +E LIGHQF
Sbjct: 301 EIAILRTMGAKDGLIKRIFVWQGVFSGVFGSLVGSLVGVLVALNLTPIIKGLEGLIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS DIYF+DFLPS+LHW DV  V  TA++LSLLA+WYPA RA+ ++PA VLS +
Sbjct: 361 LSGDIYFVDFLPSQLHWPDVALVSTTAIVLSLLATWYPASRAAKLNPAAVLSAK 414



>gi|12514668|gb|AAG55864.1|   putative kinase [Escherichia coli O157:H7 EDL933]
 gi|13360960|dbj|BAB34919.1|   putative kinase [Escherichia coli O157:H7]
 gi|25321143|pir||D85675   probable kinase ycfW [imported] - Escherichia coli (strain O157:H7,
           substrain EDL933)
 gi|25321134|pir||H90815   probable kinase [imported] - Escherichia coli (strain O157:H7,
           substrain RIMD 0509952)
 gi|15830750|ref|NP_309523.1|   putative kinase [Escherichia coli O157:H7]
 gi|15801235|ref|NP_287252.1|   putative kinase [Escherichia coli O157:H7 EDL933]
          Length = 414

 Score =  327 bits (838), Expect = 4e-88
 Identities = 412/414 (99%), Positives = 413/414 (99%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL
Sbjct: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           AVVPHGEIEAVDQPWTNWQEALD+VQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP
Sbjct: 61  AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM
Sbjct: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD
Sbjct: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
           AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG
Sbjct: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIE IEKLIGHQF
Sbjct: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIERIEKLIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ
Sbjct: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414



>gi|9656413|gb|AAF95030.1|   conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
           str. N16961]
 gi|15641884|ref|NP_231516.1|   hypothetical protein VC1882 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|11279730|pir||H82146   conserved hypothetical protein VC1882 [imported] - Vibrio cholerae
           (strain N16961 serogroup O1)
          Length = 414

 Score =  326 bits (836), Expect = 6e-88
 Identities = 236/414 (57%), Positives = 320/414 (77%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   L+L IG RFSR ++R  MVS IS+ STIGIA+GVAV+I+GLSAMNGFEREL  R+L
Sbjct: 1   MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           +V+PHGE E V  P   W + +    + P I AAAPY+  T L ESG  L+AI+V+GV+P
Sbjct: 61  SVIPHGEFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           Q+EQ +S L  F+   AW++F+ G+QQ+I+G+GVA+ L V+ GD++++MIP++N   K+ 
Sbjct: 121 QREQAVSRLSQFITAQAWQDFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSANSGDKVQ 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
            PKRVR+ V+G+L L+GQ+DHS A++PL DAQ Y  +GS V+GI++K+ DV  A ++VRD
Sbjct: 181 APKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVRD 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
            G   N YVY+ SW   YG++YRDIQ++R IMYL MVLVIGVA FNIVSTL+MAVKD++G
Sbjct: 241 VGNQLNEYVYLHSWQQKYGFLYRDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVKDRAG 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           +IA+LRT+GA DGLI+ IFVW G+ +G+ GS+ G ++G+VV+  LTP+I+ +E LIGHQF
Sbjct: 301 EIAILRTMGATDGLIKRIFVWQGVFSGVLGSVVGSVLGMVVAFNLTPLIKGLEHLIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS DIYF+DFLPS++ W DV  V  TA++LSLLA+WYPARRAS ++PA+VLS +
Sbjct: 361 LSGDIYFVDFLPSQVEWADVVLVSGTAIVLSLLATWYPARRASRLNPAQVLSSK 414



>gi|53719887|ref|YP_108873.1|   putative lipoprotein releasing system transmembrane protein
           [Burkholderia pseudomallei K96243]
 gi|53723791|ref|YP_103316.1|   lipoprotein releasing system transmembrane protein, putative
           [Burkholderia mallei ATCC 23344]
 gi|52427214|gb|AAU47807.1|   lipoprotein releasing system transmembrane protein, putative
           [Burkholderia mallei ATCC 23344]
 gi|52210301|emb|CAH36280.1|   putative lipoprotein releasing system transmembrane protein
           [Burkholderia pseudomallei K96243]
          Length = 417

 Score =  326 bits (836), Expect = 8e-88
 Identities = 142/418 (33%), Positives = 229/418 (54%), Gaps = 5/418 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRR---GGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M +P    IG R++R  +R    G +S I+++S +GIALGVA LIV LS MNGF++E+ +
Sbjct: 1   MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  RILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           R+L+V+ H EI +      +WQ      +    +  AAPY++   L+     +  + ++G
Sbjct: 61  RMLSVLAHVEIFSPTGSMPDWQLTAKEARLNRSVIGAAPYVDAQALLTRQDAVSGVMLRG 120

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
           V P  E ++S +   ++  A      G+  I++G  +A  L V  GD V+++ P      
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITP 180

Query: 178 KLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANK 236
             M P+  +  V GI +    + D + AMI + DAQ    +  + +G+ L++TD+  A +
Sbjct: 181 AGMMPRLKQFTVVGIFESGHYEYDSTLAMIDIQDAQALFRLP-APTGVRLRLTDMQKAPQ 239

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           + R+     +  +YI+ W       +  +Q+ + +M++ + L+I VA FN+VS+LVM V 
Sbjct: 240 VARELAHTLSGDLYIRDWTQQNKTWFSAVQIEKRMMFIILTLIIAVAAFNLVSSLVMTVT 299

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
           +K  DIA+LRTLGA+ G I  IFV  G+  G  G+  GV +G +++  +  +I  IE   
Sbjct: 300 NKQADIAILRTLGAQPGSIMKIFVVQGVTIGFVGTATGVALGCLIAWSIPWLIPMIEHAF 359

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           G QFL   +YFI  LPSEL   DV  + V A  LS LA+ YP+ R + + PA  L  +
Sbjct: 360 GVQFLPPSVYFISELPSELVAGDVIKIGVIAFALSALATLYPSWRGAKVRPAEALRYE 417



>gi|9949088|gb|AAG06376.1|   conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|46163960|ref|ZP_00204928.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|11347966|pir||E83271   conserved hypothetical protein PA2988 [imported] - Pseudomonas
           aeruginosa (strain PAO1)
 gi|15598184|ref|NP_251678.1|   hypothetical protein PA2988 [Pseudomonas aeruginosa PAO1]
          Length = 416

 Score =  325 bits (832), Expect = 2e-87
 Identities = 162/417 (38%), Positives = 248/417 (59%), Gaps = 4/417 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PLS+ IG R++R +RR   VS IS+ S IG+ALGV V+IV LS MNGF+RE+  RIL
Sbjct: 1   MFRPLSVFIGTRYTRAKRRSHFVSFISLTSMIGLALGVLVMIVVLSVMNGFDREMRTRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VP   +E+  QP  +W+   + V+    + A AP+    G++ +   ++ + V  V+P
Sbjct: 61  GMVPQATVESY-QPIDDWRALAEKVKAHEHVTAVAPFTQMQGMLSANGAVQTVMVDAVDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E ++S +P F +  +    KAG   I+IG+  A  L V  GD V++++P        +
Sbjct: 120 LEEAKVSIIPDFFKQGSLAELKAGGFGIVIGQLAAQKLGVGIGDKVTLILPEVAVTPAGV 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
            P+  R  V G  ++  G+LD   ++I L DA +      + V G+ LK+ D+F A ++ 
Sbjct: 180 FPRMKRFTVVGTFRVGAGELDGGLSLIHLEDAARLQRWKTNQVQGLRLKLDDLFQAPRVA 239

Query: 239 RDAGEVTNS-YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
            +          Y + W  ++G +Y+ I+M + ++ L ++L++ VA FNI+STLVM V D
Sbjct: 240 WEIARTLTDNDFYARDWTRSHGNLYQAIRMEKTMIGLLLLLIVAVAAFNIISTLVMVVTD 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K  DIA+LRTLGA  G I A F+  G + G+ G+L G ++GVV +L ++  I  +EKL+G
Sbjct: 300 KKSDIAILRTLGATPGQIMATFMVQGTVIGVIGTLVGGVLGVVAALNVSAWISALEKLLG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           HQFL+SD+YFID+LPS+L   DV  V   AL+LS  A+ YPA RA+   PA  L  +
Sbjct: 360 HQFLASDVYFIDYLPSQLMLDDVVLVCGAALVLSFFATLYPAWRAARTQPAEALRYE 416



>gi|50120755|ref|YP_049922.1|   lipoprotein releasing system transmembrane protein [Erwinia
           carotovora subsp. atroseptica SCRI1043]
 gi|49611281|emb|CAG74728.1|   lipoprotein releasing system transmembrane protein [Erwinia
           carotovora subsp. atroseptica SCRI1043]
          Length = 415

 Score =  324 bits (831), Expect = 3e-87
 Identities = 326/413 (78%), Positives = 370/413 (89%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
             PLSL IGLRFSRGRRRGGMVSLISVIST+GIALGVAVLI+GLSAMNGFERELNNRILA
Sbjct: 3   FPPLSLQIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLILGLSAMNGFERELNNRILA 62

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           VVPHGEIE V+QP+  WQ+ L  +++VPG+AAAAPYINFTGL+ESGA L+AIQVKGV+PQ
Sbjct: 63  VVPHGEIEPVNQPFDGWQDFLPTIEQVPGVAAAAPYINFTGLLESGAKLQAIQVKGVDPQ 122

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
           QE  LSALP++V  DAW+ F+ GEQQ+IIG+GVA  L V QGDWV++MIPNS+PE KLMQ
Sbjct: 123 QETHLSALPNYVLNDAWQRFRPGEQQVIIGQGVAKTLNVAQGDWVTVMIPNSDPEMKLMQ 182

Query: 182 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
           PKR+RLHV+GILQLSGQLDHS A+IPLADAQQYLDMG SV+GIA+K  DVF+ANKLVRDA
Sbjct: 183 PKRIRLHVSGILQLSGQLDHSLALIPLADAQQYLDMGQSVTGIAIKANDVFSANKLVRDA 242

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
           G+ TN YV+I+SWIGTYGYMYRDIQM+R IMYLAM+LVIGVACFNIVSTLVMAVKDKS D
Sbjct: 243 GKATNLYVHIRSWIGTYGYMYRDIQMVRTIMYLAMILVIGVACFNIVSTLVMAVKDKSSD 302

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           IAVLRTLGA DGLIRAIF+WYGLLAGL GS+ G ++GV+ +LQLTP+I  IE LIGH+ L
Sbjct: 303 IAVLRTLGASDGLIRAIFIWYGLLAGLLGSVIGAVVGVIATLQLTPMIRGIEALIGHKLL 362

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           S DIYFIDFLPSELH +DVF VL T+L+LSL+ASWYPARRAS IDPARVLSGQ
Sbjct: 363 SGDIYFIDFLPSELHLMDVFIVLGTSLVLSLIASWYPARRASRIDPARVLSGQ 415



>gi|46321384|ref|ZP_00221761.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Burkholderia cepacia R1808]
          Length = 417

 Score =  324 bits (830), Expect = 3e-87
 Identities = 137/418 (32%), Positives = 231/418 (55%), Gaps = 5/418 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRR---GGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M +P    IG R++R  +R    G +S I+++S +GIALGVA LIV LS MNGF++E+ +
Sbjct: 1   MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  RILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           R+L+V+ H E+ +      +WQ      ++ P +  AAPY++   L+     +  + ++G
Sbjct: 61  RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVIGAAPYVDAQALLTRQDAVSGVMLRG 120

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
           V P  E ++S +   ++         G+  I++G  +A  L V  GD V+++ P      
Sbjct: 121 VEPSLEPQVSDIGKDMKAGRLDALVPGQFGIVLGDALAGNLGVTVGDKVTLVAPEGTITP 180

Query: 178 KLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANK 236
             M P+  +  V G+ +    + D + AMI + DA+    M  + +G+ L+++D+  A +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMIDIRDAEALFRMS-APTGVRLRLSDMQKAPQ 239

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           +  +     +  +YI+ W       +  +Q+ + +M++ + L+I VA FN+VS+LVM V 
Sbjct: 240 VAIELSHTLSGSLYIRDWTQQNKTWFSAVQIEKRMMFIILTLIIAVAAFNLVSSLVMTVT 299

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
           +K  DIA+LRTLGA+ G I  IFV  G+  G  G+  GV +G +++  +  +I  IE L 
Sbjct: 300 NKQADIAILRTLGAQPGSIMKIFVVQGVTIGFVGTASGVALGCLIAWSIPWLIPMIEHLF 359

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           G QFL   +YFI  LPSEL   DV  + + A +LS +A+ YP+ R + + PA  L  +
Sbjct: 360 GVQFLPPSVYFISELPSELVAGDVIKIGLIAFVLSAVATLYPSWRGAKVKPAEALRYE 417



>gi|46163958|ref|ZP_00136329.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 414

 Score =  324 bits (830), Expect = 4e-87
 Identities = 146/415 (35%), Positives = 244/415 (58%), Gaps = 2/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL   IGLR++R +RR   +S IS+ S IG+ALGV  +I+ LS MNGF++E+  RIL
Sbjct: 1   MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VPH  I +  QP  +WQ   +   +   +  AAP+    G++    N+  + V G++P
Sbjct: 61  GMVPHATI-SATQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           Q+E+++S +   +   +  + K GE  I++G+  A    V  GD +++++P +      +
Sbjct: 120 QEERKVSIIGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGI 179

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLVR 239
            P+  R  +  + ++  +LD+S A+I +ADA Q L      V  + L++ D++ + ++  
Sbjct: 180 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 239

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
              +          W  T G ++  ++M + ++ L ++L+I VA FNI++TL+M V DK 
Sbjct: 240 KVVKELGQGFRSSDWTRTQGSLFNAMKMEKTMIGLLLLLIIAVAAFNIIATLIMVVADKR 299

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLGA    I AIF+  G + G+ G++ G ++GV  +L +T +I+ IE+L+GH+
Sbjct: 300 TDIAILRTLGATPRQIMAIFMVQGTVIGVIGTVIGGVLGVFAALNITGMIDRIERLVGHK 359

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             SSD+YFI++LPS+L  LDV  +   ALL+S LA+ YP+ RA+   PA  L  +
Sbjct: 360 VFSSDVYFINYLPSDLQVLDVVLICSAALLMSFLATLYPSWRAARTQPAESLRYE 414



>gi|17428130|emb|CAD14819.1|   PROBABLE LIPOPROTEIN RELEASING SYSTEM TRANSMEMBRANE [Ralstonia
           solanacearum]
 gi|17545836|ref|NP_519238.1|   PROBABLE LIPOPROTEIN RELEASING SYSTEM TRANSMEMBRANE [Ralstonia
           solanacearum GMI1000]
          Length = 416

 Score =  323 bits (829), Expect = 5e-87
 Identities = 139/418 (33%), Positives = 228/418 (54%), Gaps = 6/418 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRR---GGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M  P    IG R++R  +R      +S IS+IS +GIALGVA LIV LS MNGF++E+ +
Sbjct: 1   MKFPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  RILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           R+L+V+ H EI A      +WQ   +   +   +  AAPY+    ++     +R + ++G
Sbjct: 61  RMLSVLSHIEIMAP-GSLPDWQRTANEAMQNKEVVGAAPYVGAQAMITRDDAVRGVLLRG 119

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
           V+P  E ++S +    +     + + GE  I +G  +A  L V+QGD V+++ P      
Sbjct: 120 VSPADEPKVSDIAKDFKSGTIDDLRPGEFGIALGAEMARGLGVRQGDKVTLVAPQGTITP 179

Query: 178 KLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANK 236
             + P+  +  V G  +    + D S A+I + DA++   +    +G+ LK+ D+  A +
Sbjct: 180 AGVLPRLKQFTVIGTFESGHYEFDSSLALINMEDAERLFRLTG-PTGVRLKLVDMQRAPQ 238

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           +           +YI+ W       +  +Q  + +M++ + L+I VA FN+VSTLVM V 
Sbjct: 239 VAEALSRTLTGELYIRDWSRQNKNWFAAVQTEKKMMFIILTLIIAVAAFNLVSTLVMTVT 298

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
           DK  DIA+LRT+GA+ G I  IF+  G+  G  G+L GV+ G +++  +  I+  IE L 
Sbjct: 299 DKQADIAILRTMGAQPGSIMKIFIVQGVAIGFIGTLLGVLFGTLIAYNIDVIVPAIEHLF 358

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           G QFL  DIYFI  LPS+    D+  + + + +L+ +A+ YP+  AS ++PA  L  +
Sbjct: 359 GVQFLPKDIYFISELPSDPRVNDIATIGLISFVLASVATLYPSWHASRVNPAEALRYE 416



>gi|46312127|ref|ZP_00212726.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Burkholderia cepacia
           R18194]
          Length = 417

 Score =  323 bits (829), Expect = 5e-87
 Identities = 137/418 (32%), Positives = 229/418 (54%), Gaps = 5/418 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRR---GGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M +P    IG R++R  +R    G +S I+++S +GIALGVA LIV LS MNGF++E+ +
Sbjct: 1   MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  RILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           R+L+V+ H E+ +      +WQ      ++ P +  AAPY++   L+     +  + ++G
Sbjct: 61  RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVIGAAPYVDAQALLTRQDAVSGVMLRG 120

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
           V P  E ++S +   ++         G+  I++G  +A  L V  GD V+++ P  +   
Sbjct: 121 VEPTLEPQVSDIGKDMKAGQLGALVPGQFGIVLGDALAGNLGVTVGDKVTLVAPEGSITP 180

Query: 178 KLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANK 236
             M P+  +  V G+ +    + D + AMI + DA+    M  + +G+ L++ D+  A  
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMINIRDAEALFRMS-APTGVRLRLKDMQKAPD 239

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           +  +     +  +YI+ W       +  +Q+ + +M++ + L+I VA FN+VS+LVM V 
Sbjct: 240 VAVELSHTLSGSLYIRDWTQQNKTWFSAVQIEKRMMFIILTLIIAVAAFNLVSSLVMTVT 299

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
           +K  DIA+LRTLGA+ G I  IFV  G+  G  G+  GV +G +++  +  +I  IE L 
Sbjct: 300 NKQADIAILRTLGAQPGSIMKIFVVQGVTIGFVGTASGVALGCLIAWSIPWLIPMIEHLF 359

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           G QFL   +YFI  LPSEL   DV  + + A  LS +A+ YP+ R + + PA  L  +
Sbjct: 360 GVQFLPPSVYFISELPSELVASDVIRIGLIAFALSAIATLYPSWRGAKVKPAEALRYE 417



>gi|34104273|gb|AAQ60632.1|   lipoprotein releasing system trasmembrane protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34498419|ref|NP_902634.1|   lipoprotein releasing system trasmembrane protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 412

 Score =  321 bits (822), Expect = 3e-86
 Identities = 162/413 (39%), Positives = 242/413 (58%), Gaps = 2/413 (0%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           MP    IGLR+ R +RR G +S IS+IS +GIALGVA LI+ LS MNGF++E+  RIL+V
Sbjct: 1   MPFEAFIGLRYLRAKRRNGFISFISLISIVGIALGVAALIIVLSVMNGFQKEIRGRILSV 60

Query: 63  VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 122
             H E+   D   + W++A   + K P + AAAP+++  GL  +  N+R   V+G++P  
Sbjct: 61  ASHLEVSGYDGRLSGWRDAQAMLAKQPHVQAAAPFVSSQGLFVAYGNVRGGLVRGIDPAL 120

Query: 123 EQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP 182
           E ++  +   +      + K G   + +G  +A  L V  GD V++M P  N     M P
Sbjct: 121 ENKVVDVGRHMVAGKLEDLKPGGFGMALGVELARQLGVGVGDKVTLMTPQGNITPAGMVP 180

Query: 183 KRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
           +  +  V GI ++   + D S AM+ L DAQ    MG +VSG+ L++ D   A +L  + 
Sbjct: 181 RSKQFTVVGIFKVDMFEFDASLAMVNLRDAQVLERMGDAVSGVRLRLDDPMLAPQLKAEL 240

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
                  + +  W  T    +R +Q+ + +M + + L++ VA FN+VSTLVM V DK  D
Sbjct: 241 RPRLPQ-LLVTDWTDTNANYFRAVQIEKRMMTIILTLIVAVAAFNLVSTLVMVVTDKQAD 299

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           IA+LRTLGA  G I  IFV  G +AG+ G+L GV  GV ++L L  I+  IE++IG + L
Sbjct: 300 IAILRTLGASPGSIMKIFVIQGSVAGVLGTLAGVASGVAIALNLDVIVPVIERIIGTKIL 359

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           SSD+Y ID+LPS++ W DV  + + +LLL+L A+ YP+ RA+   PA  L  +
Sbjct: 360 SSDVYMIDYLPSDVQWGDVSTITIISLLLALFATLYPSWRAARTQPAEALRYE 412



>gi|28869314|ref|NP_791933.1|   lipoprotein releasing system transmembrane protein LolE
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28852555|gb|AAO55628.1|   lipoprotein releasing system transmembrane protein LolE
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 427

 Score =  319 bits (817), Expect = 1e-85
 Identities = 144/415 (34%), Positives = 239/415 (57%), Gaps = 2/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL L IG+R++R +RR   +S IS+ S IG+ALGV  +IV LS MNGF+RE+++RIL
Sbjct: 14  MFRPLPLFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 73

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VPH  I     P  +W+   +   K P + AA P+ +  G++    +++ IQ+ GV+P
Sbjct: 74  GMVPHAVIAGAK-PVDDWKPLAEAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 132

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             E  +S +   +   +  + K GE  +++G   A   ++  GD +++++P  +     +
Sbjct: 133 ALEHEVSIVTQHITRGSLADLKPGEFGVVLGDLTARRFRLTIGDKLTLIVPEVSSAPGGI 192

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLVR 239
            P+  RL V GI ++  +LD S  +I +ADA Q        V G+ L + D++ A ++  
Sbjct: 193 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPDQVQGVRLALKDLYKAPQVST 252

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
                     +   W  T G ++  ++M + ++ L +++++ VA FNI++TL+M V DK 
Sbjct: 253 AIASGLGEGYHADDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVNDKG 312

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA    I AIF+  G + G+ G+L G ++G++ +L ++ ++ WIE++ G  
Sbjct: 313 ADIAILRTIGATPRQIMAIFMVQGTVIGIVGTLIGGVLGIIAALNVSSLVGWIERVSGQH 372

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             SSD+YFI  LPSEL   DV  +     +LS LA+ YPA RA+ I+PA  L  +
Sbjct: 373 IFSSDVYFISNLPSELQGGDVLLICSAGFILSFLATVYPAWRAAQIEPAHALRYE 427



>gi|39935992|ref|NP_948268.1|   possible ABC type permease; lipoprotein releasing factor
           [Rhodopseudomonas palustris CGA009]
 gi|39649846|emb|CAE28368.1|   possible ABC type permease; lipoprotein releasing factor
           [Rhodopseudomonas palustris CGA009]
          Length = 426

 Score =  317 bits (812), Expect = 5e-85
 Identities = 128/414 (30%), Positives = 222/414 (53%), Gaps = 2/414 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
             P   LI  R+ R RRR G +S+I+  S +GI LGVA LI+ ++ MNGF +EL ++IL 
Sbjct: 14  FAPFEWLISGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +  H  ++ ++ P T+W++  D +  V GI  AAP ++   L  S  N   + V+G+   
Sbjct: 74  LNGHLLVQPLESPLTDWKDVADRLSGVQGIKLAAPVVDGQALASSPFNASGVFVRGIRAD 133

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
              RLS++ + ++      F    Q + IG+ +AD L +  GD ++++ P          
Sbjct: 134 DLNRLSSIANHLKQGTLEGFD-DSQGVAIGRRLADQLSLHAGDSITLVAPRGAVTPMGTT 192

Query: 182 PKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           P+     VA + ++   + D +F  +PL +AQ Y +  + V+ I +   +    +   + 
Sbjct: 193 PRIKPYKVAAVFEIGMSEYDSTFVFMPLKEAQAYFNRANDVTAIEVYTDNPDRIDVFRKA 252

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
             E     V++  W       +  +Q+ R +M+L + L++ VA  NI+S L+M VKDK  
Sbjct: 253 VTEAAGRPVFLVDWRQRNSTFFNALQVERNVMFLILTLIVLVAALNIISGLIMLVKDKGA 312

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRT+GA  G I  +F+  G   G+ G+L G  +GV+V + +  I +++  +   + 
Sbjct: 313 DIAILRTMGASQGSIMRVFLITGAAIGVVGTLTGFFVGVLVCMNIESIRQFLSWVTNTEL 372

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            S ++YF+  LP+E+ + +   V++ AL LS LA+ YP+ RA+ +DP   L  +
Sbjct: 373 FSPELYFLSKLPAEIDFAETSAVVIMALTLSFLATLYPSWRAARLDPVDALRYE 426



>gi|53756984|gb|AAU91275.1|   lipoprotein ABC transporter, permease protein LolE [Methylococcus
           capsulatus str. Bath]
 gi|53803223|ref|YP_115028.1|   lipoprotein ABC transporter, permease protein LolE [Methylococcus
           capsulatus str. Bath]
          Length = 415

 Score =  316 bits (810), Expect = 7e-85
 Identities = 153/415 (36%), Positives = 233/415 (56%), Gaps = 1/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL L IGLR++R +RR   +S I++ S +GIALGV  LI  LS MNGFE EL  RIL
Sbjct: 1   MFKPLVLYIGLRYTRAKRRTRFISFITLTSVLGIALGVTALITVLSVMNGFEAELRERIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +  H  I        +W+     + +   I   APYI    ++ S        ++G+ P
Sbjct: 61  GMTSHASISGPGGTLGDWRVLEPALSEDKRILGWAPYIEGQAMLSSERRASGAMLRGILP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           + E R+S + + +Q     +   G+  II+G  +A  L V  GD V+++ P        +
Sbjct: 121 EYEPRVSDVANHMQLGKLGDLAPGQFGIILGAELAAYLGVSSGDKVTVITPQVTATPAGI 180

Query: 181 QPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  R  V G  Q+   + D + A+I L DA + L M   +SG+ LK+ D+FNA+++ R
Sbjct: 181 LPRLKRFTVIGTFQVGMFEYDRNLALIQLEDAARLLHMEGEISGLRLKLDDLFNAHRIAR 240

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D G       Y+  W   +   +R I+  + +M++ ++L++ VA FNIVSTLVM V DK 
Sbjct: 241 DLGPKLPGDYYVTDWTQAHTNFFRAIKTEKRVMFMILLLIVAVAAFNIVSTLVMVVTDKR 300

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT G     +  IF+  G + G  G++ G + GV+++L ++ I+ WIE  +  +
Sbjct: 301 ADIAILRTQGMTPASVMGIFMVLGTVIGAVGTVIGGLGGVLLALNVSEIVHWIESQLSMK 360

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           FLS+D+Y+I  LPS+L+W DVF +   A LLSLLA+ YPA +AS + PA  L  +
Sbjct: 361 FLSADVYYISDLPSKLNWTDVFQITGMAFLLSLLATIYPAWQASRVRPAEELRYE 415



>gi|28869312|ref|NP_791931.1|   lipoprotein releasing system transmembrane protein LolC
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28852553|gb|AAO55626.1|   lipoprotein releasing system transmembrane protein LolC
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 416

 Score =  316 bits (810), Expect = 8e-85
 Identities = 163/417 (39%), Positives = 243/417 (58%), Gaps = 4/417 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL + IG R++R +RR   VS IS+ S IG+ALGV V+IV LS MNGF+ E+  R+L
Sbjct: 1   MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VPH  IE+ D P T+W+     VQ+ P + A AP+    GL+     ++ + + G+NP
Sbjct: 61  GMVPHATIESAD-PITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGINP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E+++S +  F+Q     +  AG   I+IG   A  L V  GD ++ + P        M
Sbjct: 120 AEERKVSIIDHFIQQGQLDSLSAGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLV 238
            P+  R  V GI  +  G++D    +  L D  +        V G+ LK  D+F A +  
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPDQVQGLRLKFDDLFAAPRTS 239

Query: 239 RDAGEVTNSY-VYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
            +  +       Y + W  T+G +Y+ I+M +A++ L ++L++ VA FNI+STLVM V D
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVND 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K GDIA+LRTLGA    I AIF+  G + G+ G+L G  +G++ +L ++  I  +E LIG
Sbjct: 300 KKGDIAILRTLGATPRQIMAIFMVQGTVIGVVGTLIGAALGILAALNVSAAISMLEGLIG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           H+FL++D+YFID+LPS+L   DVF V   AL+LS LA+ YPA RA+   PA  L  +
Sbjct: 360 HKFLNADVYFIDYLPSQLMAQDVFQVCGAALVLSFLATLYPAWRAARTQPAEALRYE 416



>gi|45441568|ref|NP_993107.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis biovar Medievalis str. 91001]
 gi|22125681|ref|NP_669104.1|   putative kinase [Yersinia pestis KIM]
 gi|45436429|gb|AAS61984.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis biovar Medievalis str. 91001]
 gi|21958595|gb|AAM85355.1|   putative kinase [Yersinia pestis KIM]
 gi|16121896|ref|NP_405209.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis CO92]
 gi|15979666|emb|CAC90450.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis CO92]
 gi|25321148|pir||AG0198   lipoprotein releasing system, transmembrane protein [imported] -
           Yersinia pestis (strain CO92)
          Length = 416

 Score =  316 bits (809), Expect = 9e-85
 Identities = 327/411 (79%), Positives = 369/411 (89%)

Query: 4   PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVV 63
           PLSLLIGLRFSRGRRRGGMVSLISVIST+GIALGVAVLIVGLSAMNGFEREL NRILAVV
Sbjct: 6   PLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAVV 65

Query: 64  PHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQE 123
           PHGEI  V+QP++ W + L  ++KVPGI AAAPYINFTGL+E+   LRA+QVKGV+P+ E
Sbjct: 66  PHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENSTQLRAVQVKGVDPEAE 125

Query: 124 QRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPK 183
           Q LSALPSFV  +AW +FKAG+QQII+GKG+AD L VKQGDW+++MIPNS+PE KL+QPK
Sbjct: 126 QHLSALPSFVLDNAWSHFKAGQQQIILGKGLADTLGVKQGDWLTVMIPNSDPEMKLLQPK 185

Query: 184 RVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGE 243
           R+RL VAGI QLSGQLDHS A++PL DAQQYLDMG SV+GIA+K+ DV+NAN+LVR+AGE
Sbjct: 186 RIRLQVAGIFQLSGQLDHSLALVPLIDAQQYLDMGDSVTGIAIKVNDVYNANQLVRNAGE 245

Query: 244 VTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIA 303
           V+N+YVYI SWIGTYGYMYRDIQMIR IMYLAMVLVIGVA FNIVSTLVMAVKDKS DIA
Sbjct: 246 VSNAYVYISSWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIVSTLVMAVKDKSSDIA 305

Query: 304 VLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSS 363
           VLRTLGAKDGLIRAIF+WYGLLAGL GS+ G +IGV+VSLQLT II  +EK++GHQFLSS
Sbjct: 306 VLRTLGAKDGLIRAIFIWYGLLAGLIGSISGAVIGVIVSLQLTTIIRGLEKMVGHQFLSS 365

Query: 364 DIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           DIYFIDFLPSEL W DV  VL TAL+LSL+ASWYPARRAS IDPARVLSGQ
Sbjct: 366 DIYFIDFLPSELRWFDVACVLATALVLSLIASWYPARRASRIDPARVLSGQ 416



>gi|51596762|ref|YP_070953.1|   ABC tranporter/lipoprotein releasing system, permease subunit lolE
           [Yersinia pseudotuberculosis IP 32953]
 gi|51590044|emb|CAH21678.1|   ABC tranporter/lipoprotein releasing system, permease subunit lolE
           [Yersinia pseudotuberculosis IP 32953]
          Length = 415

 Score =  316 bits (809), Expect = 9e-85
 Identities = 327/411 (79%), Positives = 370/411 (90%)

Query: 4   PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVV 63
           PLSLLIGLRFSRGRRRGGMVSLISVIST+GIALGVAVLIVGLSAMNGFEREL NRILAVV
Sbjct: 5   PLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAVV 64

Query: 64  PHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQE 123
           PHGEI  V+QP++ W + L  ++KVPGI AAAPYINFTGL+E+   LRA+QVKGV+P+ E
Sbjct: 65  PHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENSTQLRAVQVKGVDPEAE 124

Query: 124 QRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPK 183
           Q LSALPSFV  +AW +FKAG+QQII+GKG+AD L VKQG+W+++MIPNS+PE KL+QPK
Sbjct: 125 QHLSALPSFVLDNAWSHFKAGQQQIILGKGLADTLGVKQGNWLTVMIPNSDPEMKLLQPK 184

Query: 184 RVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGE 243
           R+RL VAGI QLSGQLDHS A++PL DAQQYLDMG SV+GIA+K+ DV+NAN+LVR+AGE
Sbjct: 185 RIRLQVAGIFQLSGQLDHSLALVPLIDAQQYLDMGDSVTGIAIKVNDVYNANQLVRNAGE 244

Query: 244 VTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIA 303
           V+N+YVYI SWIGTYGYMYRDIQMIR IMYLAMVLVIGVA FNIVSTLVMAVKDKS DIA
Sbjct: 245 VSNAYVYISSWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIVSTLVMAVKDKSSDIA 304

Query: 304 VLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSS 363
           VLRTLGAKDGLIRAIF+WYGLLAGL GS+ G +IGV+VSLQLT II  +EK++GHQFLSS
Sbjct: 305 VLRTLGAKDGLIRAIFIWYGLLAGLIGSISGAVIGVIVSLQLTTIIRGLEKMVGHQFLSS 364

Query: 364 DIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           DIYFIDFLPSELHW DV  VL TAL+LSL+ASWYPARRAS IDPARVLSGQ
Sbjct: 365 DIYFIDFLPSELHWFDVACVLATALVLSLIASWYPARRASRIDPARVLSGQ 415



>gi|59801184|ref|YP_207896.1|   LolC [Neisseria gonorrhoeae FA 1090]
 gi|59718079|gb|AAW89484.1|   putative lipoprotein releasing system transmembrane protein
           [Neisseria gonorrhoeae FA 1090]
          Length = 415

 Score =  315 bits (808), Expect = 1e-84
 Identities = 144/416 (34%), Positives = 239/416 (57%), Gaps = 3/416 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   L   IGLR+ R ++R G +S I+++S  GIALGV  LIV LS MNGF++E+  ++L
Sbjct: 1   MF-SLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V PH EI  +D   T+W+  L   +   GI AAAPY++   L+ +   +R +Q++G+ P
Sbjct: 60  NVAPHAEIGYIDNTDTDWRNLLRFAENRKGILAAAPYVSNQALLANAGEIRGVQIRGILP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E+++      +    + +   GE  II+G G+A+AL  + GD V+++ P  N     +
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGIGLAEALGAEVGDKVTVITPEGNVTPAGI 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL-V 238
            P+  +  V G+++    ++D+S AM  + DA+    +   V+G+ LK+ D  NA  L  
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
               E     V+++ W  +    +  +++ + +M++ + L+I VA FN+VS+LVMAV +K
Sbjct: 240 TLIPEAQRDTVWVRDWTYSNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK 299

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             DIA+LRTLG     +  IF+  G  +G FG+L GV+ GV+    +  ++ + E L+G 
Sbjct: 300 QADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLAGVVCGVLWGWNVGRVVAFFENLLGV 359

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             ++S +YFID+LPS++   DV  +   +L LS +A+ YP+ RAS   PA  L  +
Sbjct: 360 HLINSQVYFIDYLPSDVDMGDVALIACISLGLSFVATLYPSWRASKTQPAEALRYE 415



>gi|54309555|ref|YP_130575.1|   putative ABC transporter, integral membrane protein [Photobacterium
           profundum SS9]
 gi|46913991|emb|CAG20773.1|   putative ABC transporter, integral membrane protein [Photobacterium
           profundum]
          Length = 414

 Score =  315 bits (807), Expect = 2e-84
 Identities = 251/414 (60%), Positives = 329/414 (79%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PLSL IG RFSR ++R  MVS IS+ S +GIA+GVAV+I+GLSAMNGFEREL NRIL
Sbjct: 1   MFRPLSLYIGSRFSRAKQRNRMVSFISISSILGIAVGVAVIIIGLSAMNGFERELQNRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           AV+PHGE+EAV  P T WQ  L+ V+K P +  AAPY++FT L+E G+NL+A+ V+GVNP
Sbjct: 61  AVIPHGELEAVKVPLTEWQPILETVKKHPRVTGAAPYVSFTALLEKGSNLKAVAVRGVNP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           ++E ++SALP +V+ +AW+ F AG +QII+G+GVA  L++  GDW++ MIPN++ E KL 
Sbjct: 121 EEEIQVSALPQYVKDNAWQRFSAGNKQIILGQGVAQKLQIGVGDWITAMIPNADSEKKLR 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
            P R+RL V+G+L L GQ+DH+FA+IPLADAQQYL MG  VSGI+L + +V +A  +VR+
Sbjct: 181 SPHRIRLQVSGLLALGGQIDHNFAIIPLADAQQYLSMGEGVSGISLNVDNVLDAQSIVRE 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
            G     YVY+KSW   YGY+YRDIQM+R IMYL MVLVIGVACFNI+STL+M+VKD++ 
Sbjct: 241 VGFTLPVYVYLKSWTQKYGYLYRDIQMVRTIMYLVMVLVIGVACFNIISTLMMSVKDRAP 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRT+GA DGL+++IF+W+GLL+G+ GSL G IIG  V++ LT +++ +E LIGHQF
Sbjct: 301 DIAILRTMGATDGLVKSIFIWHGLLSGVVGSLVGSIIGSFVAVNLTSLVKGLETLIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS DIYF+DFLP+EL   DV  V +TA+LLSLLA+WYPARRAS + PA VLS +
Sbjct: 361 LSGDIYFVDFLPTELAINDVVVVAITAILLSLLATWYPARRASALQPALVLSAK 414



>gi|46132427|ref|ZP_00170902.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Ralstonia eutropha JMP134]
          Length = 416

 Score =  315 bits (806), Expect = 2e-84
 Identities = 133/418 (31%), Positives = 231/418 (55%), Gaps = 6/418 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRR---GGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M  P    IG R++R  +R      +S IS+IS +GIALGVA LIV LS MNGF++E+ +
Sbjct: 1   MKFPYEWQIGWRYTRASKRASRNTFISFISMISMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  RILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           R+L+V+ H E+        +WQ       +   +  AAPY+    ++     +R + ++G
Sbjct: 61  RMLSVLSHIEVIGPSA-LPDWQRTAAEAMRNKEVIGAAPYVAAQAMLTREDAVRGVLLRG 119

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
           V+P +E ++S +    +     + + GE  I +G  +A+A+ V+ GD ++++ P      
Sbjct: 120 VDPAEEPKVSDIGKQFKAGHMESLQPGEFGIALGNELANAMGVQVGDKITLLAPQGTITP 179

Query: 178 KLMQPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANK 236
             + P+  +  V G+      + D + A++ + DA+    M    +G+ LK+ D+  A +
Sbjct: 180 AGVLPRLKQFTVVGVFSSGHFEFDSALALVNIRDAETLFRMTG-PTGVRLKLADMQRAPQ 238

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           +  +     +  +Y++ W       +  +Q  + +M++ + L+I VA FN+VSTLVM V 
Sbjct: 239 VANELAGTMSGELYLRDWSKQNRNWFAAVQTEKRMMFIILTLIIAVAAFNLVSTLVMTVT 298

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
           DK  DIA+LRT+GA+ G I  IF+  G+  G  G+L GV  G +++  +  I+ +IE+L+
Sbjct: 299 DKQADIAILRTMGAQPGSIMKIFIVQGVAIGFIGTLLGVAGGTLIATNIDVIVPFIERLL 358

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             QFL  DIYFI  LPS+    D+  + + + +L+ LA+ YP+ RA+ ++PA  L  +
Sbjct: 359 HVQFLPRDIYFISELPSDPRVNDIATIGIISFVLATLATLYPSWRAARVNPAEALRYE 416



>gi|7380062|emb|CAB84643.1|   putative integral membrane protein [Neisseria meningitidis Z2491]
 gi|15794315|ref|NP_284137.1|   integral membrane protein [Neisseria meningitidis Z2491]
 gi|11279733|pir||D81909   probable integral membrane protein NMA1403 [imported] - Neisseria
           meningitidis (strain Z2491 serogroup A)
 gi|9977668|sp|P57061|LOLC_NEIMA   Lipoprotein releasing system transmembrane protein lolC
          Length = 415

 Score =  314 bits (805), Expect = 3e-84
 Identities = 145/416 (34%), Positives = 243/416 (58%), Gaps = 3/416 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   L   IGLR+ R ++R G +S I+++S  GIALGV  LIV LS MNGF++E+  ++L
Sbjct: 1   MF-SLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V PH EI  +D   T+W+  L   +   GI AAAPY++   L+ +   +R +Q++G+ P
Sbjct: 60  NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQIRGILP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E+++      +    + +   GE  II+G G+A+AL  + G+ V+++ P  N     +
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL-V 238
            P+  +  V G+++    ++D+S AM  + DA+    +   V+G+ LK+ D  NA  L  
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +   E     V+++ W  +    +  +++ + +M++ + L+I VA FN+VS+LVMAV +K
Sbjct: 240 KLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK 299

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             DIA+LRTLG   G +  IF+  G  +G FG+L GV+ GV++   +  ++ + E L+G 
Sbjct: 300 QADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLAGVVCGVLLGWNVGRVVAFFENLLGV 359

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             ++S +YFID+LPS++   DV  +   +L LS +A+ YP+RRAS   PA  L  +
Sbjct: 360 HLINSQVYFIDYLPSDVDMGDVALIACISLGLSFVATLYPSRRASKTQPAEALRYE 415



>gi|37526702|ref|NP_930046.1|   Lipoprotein releasing system transmembrane protein lolE
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36786134|emb|CAE15186.1|   Lipoprotein releasing system transmembrane protein lolE
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 415

 Score =  314 bits (804), Expect = 3e-84
 Identities = 288/413 (69%), Positives = 349/413 (84%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
            +PLSL+  LRFSRGRRRGGMVSLISVIST+GI LGVAVLI+GLSAMNGFEREL NRIL+
Sbjct: 3   NLPLSLVTALRFSRGRRRGGMVSLISVISTLGIMLGVAVLIIGLSAMNGFERELRNRILS 62

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           VVPHGEI  V QP+  WQ AL+ V+   G+ AA+PYI FTGL+E GA+L A+QV+GV+  
Sbjct: 63  VVPHGEIYTVHQPFEQWQPALERVKNTTGVVAASPYITFTGLMEKGASLHAVQVRGVDLA 122

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
            E ++S+LP FVQ + W+NF+AG QQ+I+G+GVA+ALKVKQGDW+++MIPN++PE KL+Q
Sbjct: 123 TESQVSSLPQFVQDNVWQNFQAGHQQVILGQGVANALKVKQGDWLTVMIPNNDPEMKLLQ 182

Query: 182 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
           PKR+RL V+GI QLSG LDHS A++PLADAQQYLD G  ++GIA+K+ DVF A++ VR A
Sbjct: 183 PKRIRLQVSGIFQLSGLLDHSLALVPLADAQQYLDYGQGITGIAIKVDDVFAADQRVRSA 242

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
           GE +  YVYI SWI  YGYMY DIQM+R+IMYLAM+LVIGVACFNIVSTL+MAVKDKS D
Sbjct: 243 GEASQEYVYISSWIRNYGYMYHDIQMVRSIMYLAMILVIGVACFNIVSTLIMAVKDKSSD 302

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           IA+LRTLGAKD  IRA+F+WYGLL G+ GS+ G + GV+ SL LT +I  +EKLIGHQFL
Sbjct: 303 IAILRTLGAKDRQIRAVFLWYGLLTGMTGSIAGAVAGVLASLNLTALIHGLEKLIGHQFL 362

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           S D+YFIDFLPSELH +DV YVL TAL+LSLLASWYPARRAS +DPAR+LSG+
Sbjct: 363 SGDVYFIDFLPSELHGMDVLYVLATALILSLLASWYPARRASRLDPARILSGK 415



>gi|53611016|ref|ZP_00342213.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Azotobacter vinelandii]
          Length = 416

 Score =  314 bits (804), Expect = 4e-84
 Identities = 157/417 (37%), Positives = 229/417 (54%), Gaps = 4/417 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PLS+ IGLR++  +RR   VS IS+ S IG+ALGV V+IV LS MNGF+ E+  R+L
Sbjct: 1   MFRPLSVFIGLRYTGAKRRNHFVSFISLTSMIGLALGVLVMIVVLSVMNGFDHEMRTRVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VPH  IE+   P  +W+      +  P + A AP+    GL+     ++ + +  V+P
Sbjct: 61  GMVPHATIESP-VPIDDWRSLAAQARTHPQVVAVAPFTQVQGLLTHDGQVQKVLINAVDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             E  +S +  F +       + G   I+IG   A  L V  GD V+ + P        M
Sbjct: 120 ALEPHVSIIGDFFRQGGLAALQPGGFGILIGDKAAAKLGVGIGDRVTFIAPEVAVTPAGM 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
            P+  R  V GI  +  G+LD   AM  L D  +        V G+ L+  D+F A +  
Sbjct: 180 FPRMKRFTVQGIFHVGAGELDGYVAMAHLDDIGRLQRWKSGQVQGLRLRFADLFQAPRTA 239

Query: 239 RDAGEVTNS-YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
               E       Y + W  ++G +Y+ I+M + ++ L ++L++ VA FNI+STLVM V D
Sbjct: 240 WAIAERLKGGDFYARDWTRSHGNLYQAIRMEKNMIGLLLLLIVAVAAFNIISTLVMVVTD 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K GDIA+LRTLGA    I A F+  G + G+ G+L G  +G++ +L +   I  +E L+G
Sbjct: 300 KKGDIAILRTLGATPAQIMATFMVQGTVIGVIGTLIGGALGILAALNIGSWIAALEGLLG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           H+FLS+D+YFID+LPS+L   DV  V   AL LS LA+ YPA RA+   PA  L  +
Sbjct: 360 HKFLSADVYFIDYLPSQLMGEDVLLVCGAALSLSFLATLYPAWRAARTRPAEALRYE 416



>gi|23469022|ref|ZP_00124357.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas syringae pv.
           syringae B728a]
          Length = 414

 Score =  313 bits (803), Expect = 5e-84
 Identities = 145/415 (34%), Positives = 237/415 (57%), Gaps = 2/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL + IG+R++R +RR   +S IS+ S IG+ALGV  +IV LS MNGF+RE+++RIL
Sbjct: 1   MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VPH  I     P  +W+   D   K P + AA P+ +  G++    +++ IQ+ GV+P
Sbjct: 61  GMVPHAVIAG-STPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             E  +S +   +      + K GE  +++G   A   ++  GD +++++P  +     +
Sbjct: 120 ALEHEVSIVTQHITRGNLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLVR 239
            P+  RL V GI ++  +LD S  +I +ADA Q      + V G+ L + D++ A ++  
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
                         W  T G ++  ++M + ++ L +++++ VA FNI++TL+M V DK 
Sbjct: 240 AIAAGLGEGYRADDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVNDKG 299

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA    I AIFV  G + G+ G+L G I+G++ +L ++ ++ W+E++ G  
Sbjct: 300 ADIAILRTIGATPRQIMAIFVVQGTVIGIVGTLIGGILGIIAALNVSSLVGWVERVSGQH 359

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             SSD+YFI  LPSEL   DV  +     +LS LA+ YPA RA+ I PA  L  +
Sbjct: 360 IFSSDVYFISNLPSELQAGDVLLICSAGFILSFLATIYPAWRAAQIQPAHALRYE 414



>gi|56478739|ref|YP_160328.1|   hypothetical protein ebA5819 [Azoarcus sp. EbN1]
 gi|56314782|emb|CAI09427.1|   conserved hypothetical protein [Azoarcus sp. EbN1]
          Length = 417

 Score =  313 bits (803), Expect = 5e-84
 Identities = 145/417 (34%), Positives = 234/417 (56%), Gaps = 5/417 (1%)

Query: 3   MPLSLLIGLRFSRGRRR----GGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
           M   +L+GLR++R R+R       +S IS++S +G ALG+A LIV LS MNGF+ EL  R
Sbjct: 1   MRYEILVGLRYTRSRKRAQGRNRFISFISLVSMLGTALGIAALIVVLSVMNGFQEELRTR 60

Query: 59  ILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           IL V  H ++   D     WQ+  D   + P + A APYI   G++     +R   V+GV
Sbjct: 61  ILGVASHVQVSGFDGELDAWQQVADQAARHPDVVATAPYIQEQGMLSFDQAVRGTLVRGV 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
            P  E  ++    F++  ++   + G   I++G+ +A AL+ + GD V+++ P       
Sbjct: 121 LPGAEDGVADFVRFMRSGSFDALQPGRFGIVLGRDLAFALQAQVGDKVTLIAPQGLVTPA 180

Query: 179 LMQPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
            + P+  +  V GI +    + D   A+I L DAQ    M   VSG+ LK+ D+F A ++
Sbjct: 181 AVLPRVKQFEVVGIFEAGMFEYDSGLALIHLRDAQALYRMDERVSGVRLKLDDLFAAPRV 240

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
            R+   +    V +  W  ++   +R + + + +M + + L++ VA FNIVSTLVMAV++
Sbjct: 241 ARELPGLIEGAVAVSDWTRSHANFFRAVALEKTMMTIILFLIVAVAAFNIVSTLVMAVQE 300

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K  DIA+LRTLGA    I AIFV  G + GL G   GV  G++++  L  +I  +E++ G
Sbjct: 301 KYADIAILRTLGASPASIMAIFVLQGAIIGLVGLAAGVAGGLLLAHNLDVVIPALEQITG 360

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
               + +IY+I  LPS++   DV  ++  + +L+L+A+ YP+ RAS ++PA  L  +
Sbjct: 361 ATLWNKEIYYISELPSKVLPADVITIVSLSFVLTLVATLYPSWRASRVNPAEALRYE 417



>gi|26988878|ref|NP_744303.1|   lipoprotein releasing system, permease protein [Pseudomonas putida
           KT2440]
 gi|24983686|gb|AAN67767.1|   lipoprotein releasing system, permease protein [Pseudomonas putida
           KT2440]
          Length = 416

 Score =  313 bits (802), Expect = 7e-84
 Identities = 155/417 (37%), Positives = 239/417 (57%), Gaps = 4/417 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL   IG R++R +RR   VS IS+ S IG+ALGV V+IV LS MNGF+ E+  R+L
Sbjct: 1   MFRPLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++PH  +E+  QP  +WQ     V++ P + A AP+    GL+     ++ + + G++P
Sbjct: 61  GMIPHATLES-GQPIADWQALAQQVKQNPQVVAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E+ +S + +FV          GE  I+IG   A  L V  GD ++ + P  +     M
Sbjct: 120 AREREVSIIDNFVLQGRLDQLAPGEWGIMIGDKAAAKLGVAIGDKLTFVAPEVSVTPAGM 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLV 238
            P+  R  V G   +  G++D    +  ++D  +        V G+ LK  D+F A ++ 
Sbjct: 180 FPRMKRFTVVGTFHVGAGEIDGYLGLTNISDLSRLHRWKPDQVQGLRLKFDDLFQAPRVA 239

Query: 239 RDAGEVTNSY-VYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
               +       Y + W  T+G +Y+ I+M +A++ L ++L++ VA FNI+STLVM V D
Sbjct: 240 WSIAQQLGDQEFYSRDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVND 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K GDIA+LRTLGA  G I  IF+  G + G+ G+L G ++G+  +L ++  I  IE LIG
Sbjct: 300 KRGDIAILRTLGATPGQIMLIFMVQGTVIGVIGTLIGAVVGIFAALNVSAAIAGIETLIG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           H+FL++D+YFID+LPS++   DV+ V   AL+LS  A+ YPA RA+   PA  L  +
Sbjct: 360 HKFLNADVYFIDYLPSQILAQDVYMVCGAALVLSFFATLYPAWRAARTQPAEALRYE 416



>gi|39997368|ref|NP_953319.1|   ABC transporter, permease protein [Geobacter sulfurreducens PCA]
 gi|39984259|gb|AAR35646.1|   ABC transporter, permease protein [Geobacter sulfurreducens PCA]
          Length = 423

 Score =  312 bits (799), Expect = 1e-83
 Identities = 134/423 (31%), Positives = 235/423 (55%), Gaps = 11/423 (2%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           MP  L IGLR+ + +R+   +S+I+ IST G+ALGV  LIV L+ M GFE +L  +IL  
Sbjct: 1   MPYELFIGLRYLKAKRKSTFISIITFISTAGVALGVLALIVVLAVMTGFEEDLKEKILGT 60

Query: 63  VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 122
             H  +        ++   ++ +  V G+ A  P+I    ++ SG N+  + ++GV+P  
Sbjct: 61  NAHIVVLKSSGGIEDYHAMMERLSAVKGVKAVTPFIYSQVMLSSGGNVSGVVLRGVDPAT 120

Query: 123 EQRLSALPSFVQGDAWRNF----------KAGEQQIIIGKGVADALKVKQGDWVSIMIPN 172
           + +++ L   +      +           +     IIIGK +A +L +  GD ++++ P 
Sbjct: 121 DPQVTNLSRSLVDGKLTDLTTVPAPLASAEPVRPGIIIGKELARSLNLYVGDTLNVISPL 180

Query: 173 SNPEHKLMQPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDV 231
            N     M PK  +  V G+      + D + A + L +AQ++L MG +V+GI L++ DV
Sbjct: 181 GNITPLGMVPKMKQFRVVGLFNTGMFEYDSTLAYVGLGEAQEFLSMGKAVTGIQLRVADV 240

Query: 232 FNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTL 291
           ++  ++VR+         Y + W+     +   ++  + +M++ + L++ VA F I STL
Sbjct: 241 YHTGEMVREINRDLGFPYYARDWMQMNKNILFALKTEKMVMFIILTLIVLVAAFGIASTL 300

Query: 292 VMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEW 351
            M V +K+ DIA+L+++GA    I  IFV  GL+ G+ G+  GVI G++V+L L PI+  
Sbjct: 301 FMVVMEKTKDIAILKSMGATGRSIMKIFVLEGLIIGISGTAIGVIGGLLVALNLEPIVGV 360

Query: 352 IEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
           I+++ G +  S D+Y++D  PS++   DV  + VTA+++SL+A+ YP+ +AS + PA  L
Sbjct: 361 IQRVTGFELFSKDVYYLDHFPSQVVPSDVLLISVTAVIISLVATLYPSWQASRLPPAEAL 420

Query: 412 SGQ 414
             +
Sbjct: 421 RYE 423



>gi|7226474|gb|AAF41616.1|   conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|11279734|pir||D81107   conserved hypothetical protein NMB1235 [imported] - Neisseria
           meningitidis (strain MC58 serogroup B)
 gi|9977671|sp|P57062|LOLC_NEIMB   Lipoprotein releasing system transmembrane protein lolC
 gi|15677107|ref|NP_274259.1|   hypothetical protein NMB1235 [Neisseria meningitidis MC58]
          Length = 415

 Score =  312 bits (799), Expect = 1e-83
 Identities = 144/416 (34%), Positives = 241/416 (57%), Gaps = 3/416 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   L   IGLR+ R ++R G +S I+++S  GIALGV  LIV LS MNGF++E+  ++L
Sbjct: 1   MF-SLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V PH EI  +D   T+W+  L   +   GI AAAPY++   L+ +   +R +Q++G+ P
Sbjct: 60  NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E+++      +    + +   GE  II+G G+A+AL  + G+ V+++ P  N     +
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL-V 238
            P+  +  V G+++    ++D+S AM  + DA+    +   V+G+ LK+ D  NA  L  
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
               E     V+++ W  +    +  +++ + +M++ + L+I VA FN+VS+LVMAV +K
Sbjct: 240 TLIPEAQRDAVWVRDWTYSNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK 299

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             DIA+LRTLG     +  IF+  G  +G FG+L GV+ GV++   +  ++ + E L+G 
Sbjct: 300 QADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLAGVVCGVLLGWNVGRVVAFFENLLGV 359

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             ++S +YFID+LPS++   DV  +   +L LS +A+ YP+RRAS   PA  L  +
Sbjct: 360 HLINSQVYFIDYLPSDVDMGDVALIACISLGLSFVATLYPSRRASKTQPAEALRYE 415



>gi|50085711|ref|YP_047221.1|   transport protein of outer membrane lipoproteins (ABC superfamily,
           membrane) [Acinetobacter sp. ADP1]
 gi|49531687|emb|CAG69399.1|   transport protein of outer membrane lipoproteins (ABC superfamily,
           membrane) [Acinetobacter sp. ADP1]
 gi|11345437|gb|AAG34708.1|   putative integral membrane protein [Acinetobacter sp. BD413]
          Length = 411

 Score =  312 bits (799), Expect = 1e-83
 Identities = 156/414 (37%), Positives = 239/414 (57%), Gaps = 3/414 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+SL IGLR++R RR    +S I+++S IG+ LGVAVLI  LS MNGF+REL NR+L
Sbjct: 1   MFKPISLYIGLRYTRARRSNHFISFIALVSMIGLTLGVAVLITVLSVMNGFDRELKNRVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VP   I +  Q  TNW E    V+    +   AP+    G++ +   +  I V G++P
Sbjct: 61  GMVPQATISST-QILTNWPELAKKVEGHKHVVGVAPFTQLQGMLTAQGQVAGIMVSGIDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           Q E+++S + + +   +  N K GE  I++GK + DAL +   D V++++P + P    +
Sbjct: 120 QYEKKVSIIQNHMVAGSIDNLKKGEFGIVLGKQMTDALGLGLNDNVTLVLPEATPSPAGV 179

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
            P+  R  + GI  +  ++D     I L DA   L +     GI LK+ D+F A ++  D
Sbjct: 180 VPRFKRFKIVGIFSIGAEVDSMMGYIALNDASTLLRLPDGAQGIRLKLDDIFAAPQVADD 239

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
                    Y  +W  T+G ++  IQM +A++ L + L++ VA FNIVS+LVM V DK  
Sbjct: 240 IVRTLPPNFYASNWTYTHGNLFSAIQMEKAMVSLLLFLIVLVAAFNIVSSLVMVVTDKKS 299

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRTLGA    I  IF+  G + G+ G++ G ++GV+ +  ++ II+W+   +G   
Sbjct: 300 DIAILRTLGASPATITKIFMVQGTVIGVIGTVAGAVLGVIFASSVSNIIDWVNTALGLHL 359

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             +  YFI++LPS L W DV  ++  +LLLS LA+ YPA RA+ I PA  L  +
Sbjct: 360 FDA--YFINYLPSYLRWQDVVLIVSVSLLLSFLATIYPALRAAKIQPAEALRYE 411



>gi|46133408|ref|ZP_00203154.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           R2866]
          Length = 416

 Score =  311 bits (798), Expect = 2e-83
 Identities = 210/417 (50%), Positives = 290/417 (69%), Gaps = 6/417 (1%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M     I  R+ RG+++  +V+LI+  S IGIALGVAVLIVGLSAMNGFERELN RILAV
Sbjct: 1   MNTPFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAV 60

Query: 63  VPHGEIEAV----DQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           VPH EI +     D    +WQ     +Q+ P I   +P+++FT LVE+G+ L+ +QVKGV
Sbjct: 61  VPHIEIFSAHQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENGSKLKVVQVKGV 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
             Q E ++S++ +FVQ   W  F+  E  +++G G+A  L VK GDW++++I   N + +
Sbjct: 121 EKQAEDKVSSIGNFVQEQGWNKFEK-EGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQ 179

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKL 237
             QP R  + V  IL+L GQLD+S+A++PLA AQ +L      ++G+ LK+ D F+   L
Sbjct: 180 FAQPTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNL 239

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
                      +Y+++WI  +GYMYRDIQ+IR +MY+AMVLVIGV+CFNIVSTL+MAVKD
Sbjct: 240 DLSMLNDYPQMLYMQNWISKFGYMYRDIQLIRTVMYIAMVLVIGVSCFNIVSTLIMAVKD 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K GDIA++RTLGA +  I+ IF+WYGL AG+ G L G+++G++++L LT  I+ IE +IG
Sbjct: 300 KQGDIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            + LS D+YF+DFLPSELHW DV  VL+ AL LSL+AS YPA RA+ + PA+VLS  
Sbjct: 360 KKLLSGDVYFVDFLPSELHWSDVLMVLIAALALSLIASLYPASRAAKLQPAQVLSSH 416



>gi|16273448|ref|NP_439697.1|   hypothetical protein HI1548 [Haemophilus influenzae Rd KW20]
 gi|1574393|gb|AAC23198.1|   conserved hypothetical transmembrane protein [Haemophilus
           influenzae Rd KW20]
 gi|1074836|pir||H64035   probable permease HI1548 - Haemophilus influenzae (strain Rd KW20)
 gi|1175890|sp|P44250|LOLE_HAEIN   Lipoprotein releasing system transmembrane protein lolC
          Length = 416

 Score =  311 bits (797), Expect = 2e-83
 Identities = 213/417 (51%), Positives = 291/417 (69%), Gaps = 6/417 (1%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M     I  R+ RG+++  +V+LI+  S IGIALGVAVLIVGLSAMNGFERELN RILAV
Sbjct: 1   MNTPFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAV 60

Query: 63  VPHGEIEAVDQ----PWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           VPH EI +          +WQ     +Q+ P I   +P+++FT LVE+G+ L+ +QVKGV
Sbjct: 61  VPHAEILSAPNATEPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENGSKLKVVQVKGV 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
             Q E ++S++ +FVQ   W  F+  E  +++G G+A  L VK GDW++++I   N + +
Sbjct: 121 EKQAEDKVSSIGNFVQEQGWNKFEK-EGGLVLGSGIAKELDVKVGDWITLLISQQNGDEQ 179

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKL 237
             QP R  + V  IL+L GQLD+S+A++PLA AQ +L      ++G+ LK+ D F+A  L
Sbjct: 180 FAQPTREPVQVTSILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSARNL 239

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
                      +Y+++WI  +GYMYRDIQ+IR +MY+AMVLVIGVACFNIVSTL+MAVKD
Sbjct: 240 DLSMLNDYPQMLYMQNWISKFGYMYRDIQLIRTVMYIAMVLVIGVACFNIVSTLIMAVKD 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K GDIA++RTLGA +  I+ IF+WYGL AG+ G L G+++G++++L LT  I+ IE +IG
Sbjct: 300 KQGDIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            + LS D+YF+DFLPSELHWLDV  VLV AL LSL+AS YPA RA+ + PA+VLS  
Sbjct: 360 KKLLSGDVYFVDFLPSELHWLDVLMVLVAALALSLMASLYPASRAAKLQPAQVLSSH 416



>gi|53611014|ref|ZP_00342211.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Azotobacter vinelandii]
          Length = 414

 Score =  311 bits (796), Expect = 3e-83
 Identities = 155/415 (37%), Positives = 242/415 (58%), Gaps = 2/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL++ IG R++R +RR   +S IS+ S +G+ALGV  +IV LS MNGF++E+++RIL
Sbjct: 1   MFRPLAVYIGARYTRAKRRNHYISFISLTSMLGLALGVLAMIVVLSVMNGFQKEMSSRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VPH  I    QP  +W+         P + A AP     G++     ++ IQV+G++P
Sbjct: 61  GMVPHAAIVGA-QPLDDWRSLAGTALANPQVRAVAPLTELDGMLSYKGTMQPIQVQGIDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E ++S +   +Q     +   GE   IIG+  A    ++ GD +++++P  N     +
Sbjct: 120 FEEPKVSIIADHLQQGRLTDLAPGEFGTIIGEITARRFALQVGDKLTLIVPELNGASGSV 179

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLVR 239
            P+  RL V GI ++  +LD S A+I +ADA   +      V G+ L + D++ A K+  
Sbjct: 180 TPRMQRLSVVGIFKIGAELDGSLALIHVADAAHLMRWQPGQVQGVRLALKDLYQAPKVAG 239

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
                  +      W  T G ++  +QM + ++ L ++L++ VA FNIV+TL+M V DK 
Sbjct: 240 GIAGELGAAYRAVDWTQTQGSLFSAMQMEKTMIGLLLLLIVAVAAFNIVATLIMVVADKG 299

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLGA  G I AIF+  G + G FG L G ++G++V+L ++ +I W+E + G Q
Sbjct: 300 ADIAILRTLGATPGQIMAIFMVQGSVIGAFGILIGAVLGMIVALNVSDLIGWLESVSGRQ 359

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            LSSDIYF+ +LPS+L  LDV  V   AL+LS LA+ YP+ RA+   PA  L  +
Sbjct: 360 ILSSDIYFVSYLPSDLQMLDVALVCTAALVLSFLATLYPSWRAARTQPAEALRYE 414



>gi|48770765|ref|ZP_00275108.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Ralstonia metallidurans
           CH34]
          Length = 416

 Score =  310 bits (794), Expect = 5e-83
 Identities = 137/418 (32%), Positives = 234/418 (55%), Gaps = 6/418 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRR---GGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M  P    IG R++R  +R      +S IS+IS +GIALGVA LIV LS MNGF++E+ +
Sbjct: 1   MNFPYEWQIGWRYTRASKRASRNTFISFISMISMMGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  RILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           R+L+V+ H E+     P T+WQ+      +   +  AAPY+    ++     +R + ++G
Sbjct: 61  RMLSVLSHIEVIGA-APLTDWQKTAAEALRNKEVVGAAPYVAAQAMMTREDVVRGVLLRG 119

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
           V+P +E ++S + +  +  +      G   I +G  +A+AL V+ GD V +++P      
Sbjct: 120 VDPAEEPKVSDIANQFRAGSMNALAPGGFGIALGSELANALGVRVGDKVMLVVPQGTITP 179

Query: 178 KLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANK 236
             M P+  +  VAG+      + D + A+I + DA+         +G+ LK+ D+  A +
Sbjct: 180 AGMLPRLKQFTVAGVFSSGHYEFDSALALINIGDAETLFRQSG-PTGVRLKLQDMQRAPQ 238

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           + ++     +  +Y++ W       +  +Q  + +M++ + L+I VA FN+VSTLVM V 
Sbjct: 239 VAQELAGTMSGDLYLRDWSKQNRNWFAAVQTEKRMMFIILTLIIAVAAFNLVSTLVMTVT 298

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
           DK  DIA+LRT+GA+   I  IF+  G+  G  G+L GV+ G +++  +  I+ +IE+++
Sbjct: 299 DKQADIAILRTMGAQPRSIMKIFIVQGVAIGFIGTLLGVLGGTLIATNIDVIVPFIERIL 358

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             QFL  DIYFI  LPS+    D+  + + + +L+ LA+ YP+ RAS ++PA  L  +
Sbjct: 359 HVQFLPKDIYFISELPSDPRMNDIATIGIISFVLASLATIYPSWRASRVNPAEALRYE 416



>gi|59713647|ref|YP_206422.1|   Lipoprotein releasing system transmembrane protein LolE [Vibrio
           fischeri ES114]
 gi|59481895|gb|AAW87534.1|   Lipoprotein releasing system transmembrane protein LolE [Vibrio
           fischeri ES114]
          Length = 414

 Score =  310 bits (794), Expect = 6e-83
 Identities = 238/414 (57%), Positives = 319/414 (77%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PLSL IG RF+R ++R  MVS IS+ ST+GIA+GVAV+I+GLSAMNGFEREL NR+L
Sbjct: 1   MFSPLSLFIGSRFARAKQRNKMVSFISISSTLGIAIGVAVIIIGLSAMNGFERELQNRVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           +V+PH E+E V +P T+WQ  +   +K P +  AAPY+ FT L+E G+ L+A++V+GV P
Sbjct: 61  SVIPHAELEGVKKPVTDWQSMMIQAKKHPKVTGAAPYVRFTALLERGSKLKAVEVRGVEP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             E  +S LP ++   AW  F+A +Q +I+GKGVAD L VK GDW++ MIP+ N + +L 
Sbjct: 121 LLENSVSKLPEYIDKAAWNAFEANKQSVILGKGVADTLNVKVGDWITAMIPDENADRQLR 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
            PKR RL V G+L L GQ+DH  A++PL DAQQY+++G SV+G++L+++ V NA  +VR+
Sbjct: 181 SPKRQRLQVVGLLSLGGQVDHGLAIVPLKDAQQYINLGDSVTGVSLQVSSVLNAQDIVRE 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
            G   + YVY++SWI  YGY+YRDIQ++R+IMYL MVLVIGVACFNIVSTL+MAVKD++G
Sbjct: 241 VGGTLSEYVYLRSWIQKYGYLYRDIQLVRSIMYLVMVLVIGVACFNIVSTLMMAVKDRAG 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRT+GA DGLI+ IFV  G+ +G+ GS+ G ++G VV+L LTP+I+ +E LIGHQF
Sbjct: 301 DIAILRTMGANDGLIKRIFVCQGIFSGVTGSIAGSVLGSVVALNLTPMIKALESLIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS DIYF+DFLPS+L W DV  V  TA+LLS +A+WYPARRAS + PA VLS +
Sbjct: 361 LSGDIYFVDFLPSQLVWSDVAIVTCTAILLSSIATWYPARRASRLQPAAVLSSK 414



>gi|23347634|gb|AAN29752.1|   ABC transporter, permease protein [Brucella suis 1330]
 gi|23501710|ref|NP_697837.1|   ABC transporter, permease protein [Brucella suis 1330]
          Length = 422

 Score =  310 bits (793), Expect = 6e-83
 Identities = 118/415 (28%), Positives = 213/415 (51%), Gaps = 3/415 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                 +I  R+ R RRR   +S+I+  S  GI LGVA LI+ ++ MNGF  EL  RIL 
Sbjct: 9   FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 68

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNP 120
           +  H  ++ +D+P  ++ + +  V  +PGI  A P +    LV+          V+G+  
Sbjct: 69  INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 128

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +   +L  + S ++    + F      + IG  +A+ L +  GD + ++ P+ +     +
Sbjct: 129 EDLDKLKLISSNIRQGTLKGFD-HSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGV 187

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+     +  I ++   + D S  M+PL++AQ + +    V  + + + +    + +  
Sbjct: 188 NPRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRA 247

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
              E     + +  W       +  +++ R +M++ + L++ VA  NI+S L+M VKDK 
Sbjct: 248 PVEEAAARQLSLVDWRQRNQTFFSALEVERNVMFMILTLIVLVAALNIISGLIMLVKDKG 307

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA  G +  IF+  G   G+ G++ GVI+GVVV L +  + E+   L G  
Sbjct: 308 HDIAILRTMGATRGAVMRIFLMTGAAIGVTGTVAGVILGVVVCLNVERLREFFSWLSGTT 367

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             + ++YF+  LP+++   +   V+V AL+LS +A+ +PA RA+ +DP   L  +
Sbjct: 368 LFNPELYFLSQLPAKMDPGETLSVIVMALVLSFIATIFPAWRAAKLDPVEALRYE 422



>gi|56707553|ref|YP_169449.1|   lipoprotein releasing system, subunit C,putative membrane protein
           [Francisella tularensis subsp. tularensis Schu 4]
 gi|54112849|gb|AAV29058.1|   NT02FT1680 [synthetic construct]
 gi|56604045|emb|CAG45037.1|   lipoprotein releasing system, subunit C,putative membrane protein
           [Francisella tularensis subsp. tularensis SCHU S4]
          Length = 420

 Score =  310 bits (793), Expect = 7e-83
 Identities = 140/420 (33%), Positives = 243/420 (57%), Gaps = 6/420 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   L L IGLR+ R ++R   +S+IS IS +GI+LGVAVLI  +S MNGF++++ ++IL
Sbjct: 1   MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQK-VPGIAAAAPYINFTGLVESGANLRA---IQVK 116
            +VP  ++  +    T+W      V+K  P + A AP +   GL+ + +       +Q++
Sbjct: 61  MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSGSSTTAFVQIQ 120

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGE-QQIIIGKGVADALKVKQGDWVSIMIPNSNP 175
           G+ P+ + ++  +   +      +    +   I++G  +AD L VK GD V++++P  + 
Sbjct: 121 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADNLGVKVGDKVTLIVPKISL 180

Query: 176 EHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNAN 235
               M P+  +  V+GI  +S Q D  +AMI + DAQ+  + G+SVS + L + ++++A 
Sbjct: 181 TPAGMIPRIKQFRVSGIFSVSYQYDAYYAMINIKDAQKVFETGNSVSSLQLSVKNIYDAP 240

Query: 236 KLVRDAGE-VTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMA 294
            +     +     Y + + W       +  ++M + +M+  ++L+I VA FN++S+LVM 
Sbjct: 241 LVKDKLNDGAIPPYYFTRDWTDENKSFFDALKMEKTMMFFILLLIITVAVFNLLSSLVMV 300

Query: 295 VKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEK 354
           V DK  DIA+LRT+G     I  +F++ G + GL G++ GV++G+++S   T I+ +I+ 
Sbjct: 301 VTDKRSDIAILRTMGMSSRQIITVFIYQGFIIGLIGTVIGVLLGILLSTYATEIVNFIQN 360

Query: 355 LIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           L G QFLS+ +Y I+++PSEL W DV  V + ++ LS LA+ YPA  AS + P   L  +
Sbjct: 361 LTGKQFLSASVYLINYIPSELMWSDVIKVTLVSMFLSFLATLYPAWSASKVQPVEALRYE 420



>gi|17983113|gb|AAL52320.1|   LIPOPROTEIN RELEASING SYSTEM TRANSMEMBRANE PROTEIN LOLE [Brucella
           melitensis 16M]
 gi|17987422|ref|NP_540056.1|   LIPOPROTEIN RELEASING SYSTEM TRANSMEMBRANE PROTEIN LOLE [Brucella
           melitensis 16M]
 gi|25321161|pir||AE3394   lipoprotein releasing system transmembrane protein lolE [imported]
           - Brucella melitensis (strain 16M)
          Length = 422

 Score =  310 bits (793), Expect = 7e-83
 Identities = 118/415 (28%), Positives = 213/415 (51%), Gaps = 3/415 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                 +I  R+ R RRR   +S+I+  S  GI LGVA LI+ ++ MNGF  EL  RIL 
Sbjct: 9   FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 68

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNP 120
           +  H  ++ +D+P  ++ + +  V  +PGI  A P +    LV+          V+G+  
Sbjct: 69  INGHLIMQPIDRPLDDYADLIKRVNAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 128

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +   +L  + S ++    + F      + IG  +A+ L +  GD + ++ P+ +     +
Sbjct: 129 EDLDKLKLISSNIRQGTLKGFD-HSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGV 187

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+     +  I ++   + D S  M+PL++AQ + +    V  + + + +    + +  
Sbjct: 188 NPRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRA 247

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
              E     + +  W       +  +++ R +M++ + L++ VA  NI+S L+M VKDK 
Sbjct: 248 PVEEAAARQLSLVDWRQRNQTFFSALEVERNVMFMILTLIVLVAALNIISGLIMLVKDKG 307

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA  G +  IF+  G   G+ G++ GVI+GVVV L +  + E+   L G  
Sbjct: 308 HDIAILRTMGATRGAVMRIFLMTGAAIGVTGTVAGVILGVVVCLNVERLREFFSWLSGTT 367

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             + ++YF+  LP+++   +   V+V AL+LS +A+ +PA RA+ +DP   L  +
Sbjct: 368 LFNPELYFLSQLPAKMDPGETLSVIVMALVLSFIATIFPAWRAAKLDPVEALRYE 422



>gi|53729138|ref|ZP_00348325.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 416

 Score =  309 bits (791), Expect = 1e-82
 Identities = 201/417 (48%), Positives = 294/417 (70%), Gaps = 6/417 (1%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M     I  R+ RG+++  +VSLIS+ S++GIALGVAVLI+GLSAMNGFERELN R+L+V
Sbjct: 1   MNTPFFISWRYQRGKQKNRLVSLISLFSSVGIALGVAVLIIGLSAMNGFERELNQRVLSV 60

Query: 63  VPHGEIEAVDQ----PWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           VPH E+ + +     P    ++  +     P + A++P+++FTGL+E+G  L+  QV+GV
Sbjct: 61  VPHAELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGV 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
           +P ++ ++S+L  ++  + W+ F   +  +I+G G+A  L+V  GD V++++P    + K
Sbjct: 121 DPVKQDKVSSLSHYIPSEQWQAFHQ-QGGLILGAGIAKDLEVAAGDEVTLLLPQPTEDGK 179

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKL 237
           L QP R  L V G+L+L GQLDHS+A++P+  AQ+ L+   +  SGI L + + F   +L
Sbjct: 180 LAQPLRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKEPFKVQEL 239

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
                   N  +Y+ +WI  +GYMY DIQ++R +MY+AMVLVIGVACFNI+STL+MAVKD
Sbjct: 240 QMPELANFNQPLYLNTWIEKFGYMYNDIQLVRTVMYIAMVLVIGVACFNIISTLIMAVKD 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K GDIA++RTLGA +G I+ IF+WYGLL+G+ G+L G+I+GV++SL LT +I+ IE   G
Sbjct: 300 KQGDIAIMRTLGANNGFIKRIFLWYGLLSGMKGALAGIILGVILSLNLTAMIKAIEGFFG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            + LS  +YF+DFLPSELHW DV YVL+  ++LSL AS YPA RA+ ++PA+VLSG 
Sbjct: 360 IKLLSDGVYFVDFLPSELHWQDVAYVLIATIVLSLFASLYPATRAAKLEPAKVLSGH 416



>gi|47573590|ref|ZP_00243628.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rubrivivax gelatinosus PM1]
          Length = 418

 Score =  309 bits (791), Expect = 1e-82
 Identities = 139/419 (33%), Positives = 230/419 (54%), Gaps = 6/419 (1%)

Query: 1   MAMPLSLLIGLRFSRGRR---RGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M  P  L IG R++R  R   R G +S IS +S +GIALGVA LI+ LS MNGF++E+ +
Sbjct: 1   MHWPYELTIGWRYTRAGRSGRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60

Query: 58  RILAVVPHGEIEAVDQP-WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
           R+L+V+ H EI         +W+      +  P +  AAP+I    L+  G ++R   V+
Sbjct: 61  RMLSVIAHVEIFEAGGNALPDWRATAAAARGNPEVLGAAPFIATQALIARGEDMRGAVVR 120

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           G++P +E  ++ L +  +  A+   K G   I++G  +A  L VK GD V+++ PN    
Sbjct: 121 GIDPAEEANVTPLAAQSRDGAFAGLKPGAWGIVLGGELARTLGVKVGDPVTLVTPNGQVT 180

Query: 177 HKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNAN 235
              + P+  ++ V G       + D   A++ + DA +   +    +G+ L++ D   A 
Sbjct: 181 PAGVVPRLKQMTVVGTFNAGHYEYDSGLALMHIDDAARLFRVDG-PTGVQLRLRDQQQAR 239

Query: 236 KLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAV 295
           ++  +  E     V ++ W  T    +  +Q+ + +M++ + L++ VA FN+VSTLVM V
Sbjct: 240 RVGFELAEQLGPTVSVRDWTRTNRNWFDAVQLEKRMMFIILTLIVAVAAFNLVSTLVMTV 299

Query: 296 KDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKL 355
            DK  DIA+LRTLGA    I  IF+  G  AG+ G+  G+ +G++VSL +  I+  +E+L
Sbjct: 300 TDKQADIAILRTLGASPRSIMGIFMVQGAAAGVIGTCSGLTLGLLVSLNIDVIVPALERL 359

Query: 356 IGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
               FL   IY I  +PS+    D+  + + +LLL+ +A+ YP+ RAS + PA+ L  +
Sbjct: 360 FNASFLPGSIYLISRMPSDPQSADIVPIGLVSLLLAFVATIYPSWRASRVQPAQALRYE 418



>gi|29142135|ref|NP_805477.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 gi|16760094|ref|NP_455711.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29137764|gb|AAO69326.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 gi|16502388|emb|CAD08343.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|25321155|pir||AD0645   ABC transporter integral membrane chain STY1259 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
          Length = 414

 Score =  309 bits (791), Expect = 1e-82
 Identities = 383/414 (92%), Positives = 394/414 (95%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           MA PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL
Sbjct: 1   MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           AVVPHGEIEAV+QPWTNW+EAL  VQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV+P
Sbjct: 61  AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +QEQ+LSALPSFVQ  AW +FKAGEQQIIIGKGVADAL VKQGDWVSIMIPN+N +HKL+
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           QPKRVRLHV GILQLSGQLDHSFAMIPL DAQQYLDMGSSVSGIALK+ DVFNANKLVRD
Sbjct: 181 QPKRVRLHVIGILQLSGQLDHSFAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVRD 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
           AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM+LVIGVACFNIVSTLVMAVKDKSG
Sbjct: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMILVIGVACFNIVSTLVMAVKDKSG 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIAVLRTLGAKDGLIRAIFVWYGLLAGL GSL GV IGVVVSLQLT II  IEK IGHQF
Sbjct: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLIGVAIGVVVSLQLTAIINGIEKEIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS DIYFIDFLPSELHWLDV YVLVTALLLSLLASWYPARRASNIDPARVLSGQ
Sbjct: 361 LSGDIYFIDFLPSELHWLDVVYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414



>gi|56413795|ref|YP_150870.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
 gi|56128052|gb|AAV77558.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
          Length = 414

 Score =  309 bits (791), Expect = 1e-82
 Identities = 382/414 (92%), Positives = 393/414 (94%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           MA PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL
Sbjct: 1   MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           AVVPHGEIEAV+QPWTNW+EAL  VQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV+P
Sbjct: 61  AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +QEQ+LSALPSFVQ  AW +FKAGEQQIIIGKGVADAL VKQGDWVSIMIPN+N +HKL+
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           QPKRVRLHV GILQLSGQLDHSFAMIPL DAQQYLDMGS VSGIALK+ DVFNANKLVRD
Sbjct: 181 QPKRVRLHVIGILQLSGQLDHSFAMIPLEDAQQYLDMGSRVSGIALKVHDVFNANKLVRD 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
           AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM+LVIGVACFNIVSTLVMAVKDKSG
Sbjct: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMILVIGVACFNIVSTLVMAVKDKSG 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIAVLRTLGAKDGLIRAIFVWYGLLAGL GSL GV IGVVVSLQLT II  IEK IGHQF
Sbjct: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLIGVAIGVVVSLQLTAIINGIEKAIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS DIYFIDFLPSELHWLDV YVLVTALLLSLLASWYPARRASNIDPARVLSGQ
Sbjct: 361 LSGDIYFIDFLPSELHWLDVVYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414



>gi|53732822|ref|ZP_00349581.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           R2846]
          Length = 416

 Score =  308 bits (790), Expect = 1e-82
 Identities = 211/417 (50%), Positives = 291/417 (69%), Gaps = 6/417 (1%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M     I  R+ RG+++  +V+LI+  S IGIALGVAVLIVGLSAMNGFERELN RILAV
Sbjct: 1   MNTPFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAV 60

Query: 63  VPHGEIEAVDQ----PWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           VPH EI +  Q       +WQ     +Q+ P I   +P+++FT LVE+G+ L+ +QVKGV
Sbjct: 61  VPHIEIFSAPQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENGSKLKVVQVKGV 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
             Q E ++S++ +FVQ   W  F   E  +++G G+A  L VK GDW++++I   N + +
Sbjct: 121 EKQAEDKVSSIGNFVQEQGWNKF-GKEGGLVLGSGIAKELDVKVGDWITLLISQQNGDEQ 179

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKL 237
             QP R  + +  IL+L GQLD+S+A++PLA AQ +L      ++G+ LK+ D F+   L
Sbjct: 180 FAQPTREPVQITAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNL 239

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
                      +Y+++WI  +GYMYRDIQ+IR +MY+AMVLVIGVACFNIVSTL+MAVKD
Sbjct: 240 DLSMLNDYPQMLYMQNWISKFGYMYRDIQLIRTVMYIAMVLVIGVACFNIVSTLIMAVKD 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K GDIA++RTLGA +  I+ IF+WYGL AG+ G L G+++G++++L LT  I+ IE +IG
Sbjct: 300 KQGDIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGIVLGIILALNLTTFIQCIEWIIG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            + LS D+YF+DFLPSELHWLDV  VL+ AL LSL+AS+YPA RA+ + PA+VLS  
Sbjct: 360 KKLLSGDVYFVDFLPSELHWLDVLMVLIAALALSLMASFYPASRAAKLQPAQVLSSH 416



>gi|62127372|gb|AAX65075.1|   ABC transporter, integral membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|16419737|gb|AAL20148.1|   integral membrane protein ABC transporter [Salmonella typhimurium
           LT2]
 gi|16764574|ref|NP_460189.1|   integral membrane protein [Salmonella typhimurium LT2]
          Length = 414

 Score =  308 bits (790), Expect = 2e-82
 Identities = 383/414 (92%), Positives = 394/414 (95%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           MA PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL
Sbjct: 1   MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           AVVPHGEIEAV+QPWTNW+EAL  VQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV+P
Sbjct: 61  AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +QEQ+LSALPSFVQ  AW +FKAGEQQIIIGKGVADAL VKQGDWVSIMIPN+N +HKL+
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           QPKRVRLHV GILQLSGQLDHSFAMIPL DAQQYLDMGSSVSGIALK+ DVFNANKLVRD
Sbjct: 181 QPKRVRLHVIGILQLSGQLDHSFAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVRD 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
           AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM+LVIGVACFNIVSTLVMAVKDKSG
Sbjct: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMILVIGVACFNIVSTLVMAVKDKSG 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIAVLRTLGAKDGLIRAIFVWYGLLAGL GSL GV IGVVVSLQLT II  IEK IGHQF
Sbjct: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLIGVAIGVVVSLQLTAIINGIEKAIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS DIYFIDFLPSELHWLDV YVLVTALLLSLLASWYPARRASNIDPARVLSGQ
Sbjct: 361 LSGDIYFIDFLPSELHWLDVVYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414



>gi|48845381|ref|ZP_00299663.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Geobacter metallireducens
           GS-15]
          Length = 423

 Score =  308 bits (789), Expect = 2e-82
 Identities = 129/423 (30%), Positives = 235/423 (55%), Gaps = 11/423 (2%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M   L IGLR+ + +R+   +S+I+ IST G+ALGV  LIV L+ M GFE +L  +IL  
Sbjct: 1   MSYELFIGLRYLKAKRKSTFISIITFISTAGVALGVMALIVVLAVMTGFEEDLKEKILGT 60

Query: 63  VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 122
             H  +        ++   ++ ++K+ G+ AA P+I    ++ +G+N+  + ++G++ + 
Sbjct: 61  NAHVVVLKSSGTMEDYPAIMERLKKMKGVVAATPFIYSQVMLSTGSNVSGVVLRGIDVKT 120

Query: 123 EQRLSALPSFVQGDAWRNFK----------AGEQQIIIGKGVADALKVKQGDWVSIMIPN 172
           +  ++ L   +      + +            +  IIIG+ +A +L +  GD V+++ P 
Sbjct: 121 DPLVTNLYRSLVEGKLGDLERSPLPLATPEPPKPGIIIGRELARSLNIYPGDTVNVISPL 180

Query: 173 SNPEHKLMQPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDV 231
            N     M PK  +  V G+      + D + A + L++AQ++L +G + +GI L++ DV
Sbjct: 181 GNITPLGMVPKMKQFRVVGLFNTGMFEYDSTLAYVGLSEAQEFLSLGHAATGIQLRVQDV 240

Query: 232 FNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTL 291
           +   +LVR          + + W+     +   ++  + +M++ + L++ VA F I STL
Sbjct: 241 YRTGELVRKIDRELGFPFHARDWMQMNKNILFALKTEKMVMFVILTLIVLVAAFGIASTL 300

Query: 292 VMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEW 351
            M V +K+ DIA+L+++GA    I  IFV  GL+ G+ G++ GVI G++V+  L PI+  
Sbjct: 301 FMVVLEKTKDIAILKSMGATGRSIMKIFVLEGLIIGISGTVIGVIGGLLVAYNLEPIVGV 360

Query: 352 IEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
           ++K+ G +  S D+Y++D  PS +   DV  + VTA+L+SL+A+ YP+ +AS + PA  L
Sbjct: 361 VQKVTGFELFSKDVYYLDHFPSRVVLSDVVLISVTAVLISLVATLYPSWQASKLPPAEAL 420

Query: 412 SGQ 414
             +
Sbjct: 421 RYE 423



>gi|27379987|ref|NP_771516.1|   probable ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27353141|dbj|BAC50141.1|   bll4876 [Bradyrhizobium japonicum USDA 110]
          Length = 426

 Score =  308 bits (788), Expect = 3e-82
 Identities = 126/414 (30%), Positives = 221/414 (53%), Gaps = 2/414 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
             P   ++  R+ R RR+ G +S+I+  S +GI LGVA LI+ ++ MNGF +EL ++IL 
Sbjct: 14  FAPFEWMLSARYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +  H  ++ ++ P T+W++  D + +V GI  AAP ++   L  S  N   + V+G+   
Sbjct: 74  LNGHILVQPLESPLTDWKDVADRISQVQGIRLAAPVVDGQALASSPWNASGVLVRGIRSD 133

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
               L+++   ++  +   F  G Q + IG+ +AD L +  GD ++++ P          
Sbjct: 134 DLNNLTSIAKNIKQGSLEGFDDG-QGVAIGRRLADQLSLHAGDSITLVAPKGAVTPMGTT 192

Query: 182 PKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           P+     +  + ++   + D  F  +PLA+AQ Y +  + V+ I +  T+        + 
Sbjct: 193 PRIKPYKIVAVFEIGMSEYDLGFVFMPLAEAQAYFNRSNDVTSIEVFTTNPDRIVAFNKA 252

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
             E     V++  W       +  +Q+ R +M+L + +++ VA  NIVS L+M VKDK  
Sbjct: 253 VTEAAARPVFLVDWRQRNSTFFNALQVERNVMFLILTMIVLVAALNIVSGLIMLVKDKGS 312

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRT+GA  G I  IF+  G   G+ G+L G  +G+V+ L +  I +++  L   + 
Sbjct: 313 DIAILRTMGASQGSIMRIFLITGASIGVVGTLVGFFVGLVICLNIESIRQFLSWLTSTEL 372

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            S ++YF+  LP+E+   +   V++ AL LS LA+ YP+ RA+ +DP   L  +
Sbjct: 373 FSPELYFLSKLPAEIDVGETTAVVIMALTLSFLATLYPSWRAARLDPVEALRYE 426



>gi|26988880|ref|NP_744305.1|   lipoprotein releasing system, permease protein [Pseudomonas putida
           KT2440]
 gi|24983688|gb|AAN67769.1|   lipoprotein releasing system, permease protein [Pseudomonas putida
           KT2440]
          Length = 413

 Score =  307 bits (786), Expect = 4e-82
 Identities = 147/412 (35%), Positives = 238/412 (57%), Gaps = 2/412 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL + IG R++R +RR   +S IS+ S IG++LGV  +IV LS MNGF+RE+++RIL
Sbjct: 1   MFRPLPIFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VPH  I  V QP  +W +  D   K P + A AP     G++     ++ IQV G++P
Sbjct: 61  GLVPHAAILGV-QPVDDWHKVADAAMKNPAVMAVAPITEMEGMLSYKGAMQPIQVGGIDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E ++S +   +     +  + GE  ++IG+  A   ++  GD +++++P  + E   +
Sbjct: 120 AEEGKVSIVGQHIVQGRLQGLQPGEFGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGI 179

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKLVR 239
            P+  RL V GI ++  +LD S A I +ADA +        V G+ LK+ D++ A ++ +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSQAYIHVADAAEMQRWAPGQVQGVRLKLHDLYAAPQVSK 239

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
                         W  T G ++  ++M + ++ L ++++I VA FNI++TLVM V DK 
Sbjct: 240 AIAAGLGDAYRADDWSHTQGSLFSAMKMEKTMIGLLLMMIIAVAAFNIIATLVMVVNDKG 299

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLGA    I   F+  G L G+ G+L G ++GV+ +  ++ I+ W+E++ G  
Sbjct: 300 PDIAILRTLGATPAQIMGTFMVQGSLIGIVGTLIGGVLGVIAAFNVSQIVGWLERVSGQH 359

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
             +SD+YF+  LPS+L W DV  +    L++S LA+ YPA RAS + PA  L
Sbjct: 360 IFTSDVYFVSSLPSQLQWGDVAIICTAGLVMSFLATIYPAYRASQVQPAIGL 411



>gi|30249056|ref|NP_841126.1|   DUF214 [Nitrosomonas europaea ATCC 19718]
 gi|30138673|emb|CAD84968.1|   DUF214 [Nitrosomonas europaea ATCC 19718]
          Length = 415

 Score =  306 bits (783), Expect = 9e-82
 Identities = 153/413 (37%), Positives = 239/413 (57%), Gaps = 2/413 (0%)

Query: 4   PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVV 63
               LIGLR++R +RR   +S IS+IS +G+ LG+  LI  +S MNGF +E+  RIL V 
Sbjct: 3   SYEFLIGLRYTRAKRRNHFISFISLISLLGMTLGMTALITVMSVMNGFHKEVRARILGVA 62

Query: 64  PHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQE 123
            H +I +      +W++  +   + P IAAAAPYI+  G++     +R + V+G+ P  E
Sbjct: 63  SHAQISSYQGSLYDWEQIREAAIQNPQIAAAAPYIDAQGMLSHDNMVRGVMVRGILPADE 122

Query: 124 QRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPK 183
            R++     +   +      GE  IIIG+ +A  L    G+ + ++ P        + P+
Sbjct: 123 NRVADFAGKMVEGSLDRLAPGEFGIIIGQELARNLNAFPGNKIVLISPQGQITPAGILPR 182

Query: 184 RVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKLVRDA 241
             +  V GI  +   + D   A+I LADAQ+   M  + VSGI LK+ D+F A ++++D 
Sbjct: 183 LKQFTVTGIFDVGHFEYDSGLALIHLADAQKLYRMAPNQVSGIRLKLHDMFKAPQVIQDL 242

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
             V  + +Y   W   +   +R IQ+ + ++ L + L+I VA FNIVSTLVMAV DK  D
Sbjct: 243 ARVLPADLYFTDWTQQHANYFRAIQIEKRMLSLILALIIAVAAFNIVSTLVMAVTDKQSD 302

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           IA+LRTLGA  G I  IF+  G L G+ G+L G++ GV+++  +  +I +IE L+  QFL
Sbjct: 303 IAILRTLGASSGSIMKIFIIQGALIGILGTLLGLLGGVLLAYNVGDVIAFIEHLLSTQFL 362

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           S ++Y+I  +PS+    D+  V V +L+L+LLA+ YP+ RAS ++PA  L  +
Sbjct: 363 SQEVYYISKIPSDPQLADIVTVAVVSLILTLLATLYPSYRASKVNPAEALRYE 415



>gi|13471386|ref|NP_102952.1|   hypothetical protein mll1342 [Mesorhizobium loti MAFF303099]
 gi|14022128|dbj|BAB48738.1|   mll1342 [Mesorhizobium loti MAFF303099]
          Length = 428

 Score =  306 bits (783), Expect = 1e-81
 Identities = 124/416 (29%), Positives = 219/416 (52%), Gaps = 6/416 (1%)

Query: 4   PLSLL---IGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           P S     +  R+ R RR+  ++S+I+ IS +GI LGVA LIV ++ MNGF  EL  RIL
Sbjct: 14  PFSFFERTVAWRYLRSRRKETVISVIASISFLGIMLGVATLIVVMAVMNGFRAELLTRIL 73

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVN 119
            V  H  ++ +D P  ++ +    +  VPG+  A P I+   L +          V+G+ 
Sbjct: 74  GVNGHLIVQPLDSPLEDYAQVAGRINGVPGVKYAIPLIDGQVLAQGNVGGGTGALVRGIR 133

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
            +   +++ + + ++  +  +F +GE  + IGK +A  L +  GD ++++ P+ +     
Sbjct: 134 GEDLGKIAIVANNIKQGSLASFDSGE-GVAIGKRMAQNLGLTLGDTITLISPDGDVTPIG 192

Query: 180 MQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLV 238
             P+     +A I ++   + D S   +P ++AQ Y +M      I + + +  N + L 
Sbjct: 193 TTPRMKGYKIAAIFEVGMSEYDTSIVYMPFSEAQLYFNMDGRAQTIEIYVDNPDNVDALK 252

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
               E     + +  W       +  +Q+ R +M++ + L++ VA  NI+S L+M VKDK
Sbjct: 253 PKVEEAAQRPIDMVDWRQRNETFFSALQVERNVMFMILTLIVLVAALNIISGLIMLVKDK 312

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             DIA+LRT+GA  G I  IF+  G   G+ G+L GV++GVV+   +  I ++   + G 
Sbjct: 313 GHDIAILRTMGASRGAILRIFLMTGAAIGVTGTLAGVLLGVVICTNIESIRQFFSWMTGK 372

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
              + ++YF+  LP+++   +  YV++ AL LS LA+ +PA RA+ +DP   L  +
Sbjct: 373 VLFNPELYFLSQLPAKMDPRETTYVIIMALGLSFLATVFPAWRAARLDPVEALRYE 428



>gi|15837678|ref|NP_298366.1|   hypothetical protein XF1076 [Xylella fastidiosa 9a5c]
 gi|9106026|gb|AAF83886.1|   conserved hypothetical protein [Xylella fastidiosa 9a5c]
 gi|11279729|pir||A82726   conserved hypothetical protein XF1076 [imported] - Xylella
           fastidiosa (strain 9a5c)
 gi|10720069|sp|Q9PEF2|LOLC_XYLFA   Lipoprotein releasing system transmembrane protein lolC
          Length = 413

 Score =  303 bits (776), Expect = 6e-81
 Identities = 143/415 (34%), Positives = 234/415 (56%), Gaps = 3/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PLS+ IGLR+ R +RR G +S IS+ S +GIALGV VLI  L+ M+GF++E+ +R+L
Sbjct: 1   MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +  H  + A   P  +WQ A+      P +A AAPYI    L++ G   +   ++G+ P
Sbjct: 61  QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQ-GERHQPAMMRGIVP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            QE ++S L   ++  +  + K GE  I++GK +A  L V  GD V +++  +       
Sbjct: 120 NQEDKVSVLAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQTQTTPVGT 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  R  V+G+ ++   ++D   A++ + D Q+ + M   V+G+ LK+ D+ +A  + R
Sbjct: 180 MPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKVMRMDG-VTGVRLKLHDMDHAWDVAR 238

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D     N    +  W      +Y  ++M + +M + + L+I +  FN+VS+ VM V DK 
Sbjct: 239 DLAVRLNGPYLVSDWTRENANLYSSLKMEKTVMGILLSLIIAMGAFNLVSSQVMLVTDKQ 298

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLG     +  +F+  G L G+ G+L GVI GVV++  L  I++ IE      
Sbjct: 299 ADIAILRTLGLSPAGVMRVFMVQGSLIGIIGTLSGVIGGVVLTWNLERILKLIESTFNIT 358

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L  D+Y+I  LP+++ + DV  + + AL++S +A+ YPA RA+ I PA  L  +
Sbjct: 359 LLPEDVYYITGLPTDMQFPDVVVITLMALVMSFIATLYPAWRAARIQPAEALRYE 413



>gi|48730015|ref|ZP_00263764.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas fluorescens
           PfO-1]
          Length = 414

 Score =  301 bits (772), Expect = 2e-80
 Identities = 144/414 (34%), Positives = 238/414 (57%), Gaps = 2/414 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PLS+ IG R++R +RR   VS IS+ S IG+ALGV  +IV LS MNGF+RE+++RIL
Sbjct: 1   MFRPLSIFIGTRYTRAKRRNRFVSFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VPH  I  V  P  +WQ       K P + AA P+    G++     ++ IQ+ GV+P
Sbjct: 61  GMVPHATIVGVK-PIDDWQPVAAAAMKNPEVTAAVPFTEMEGMLSYKGMMQPIQISGVDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            QE ++S +   +        K GE  +++G+  A   ++  GD +++++P  +     +
Sbjct: 120 AQEGKVSIVAQHIVQGRLDALKPGEFGVVLGEITARRFRLNVGDKITLIVPEVSTAPGGI 179

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKLVR 239
            P+  RL+V G+ ++  +LD S  +I ++DA        + V  + L + D++ A K+  
Sbjct: 180 TPRMQRLNVVGVFKVGAELDGSMGLIHVSDAATMQHWEPNQVQSVRLAVKDLYAAPKVSS 239

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D      +      W  T G ++  ++M + ++ L +++++ VA FNI++TL+M V DK 
Sbjct: 240 DIASGLGADFKADDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVNDKG 299

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA    I AIF+  G + G+ G++ G ++GV+ +L ++ ++ W+E++ G  
Sbjct: 300 ADIAILRTIGATPRQIMAIFMVQGTVIGIVGTIIGGVLGVIAALNVSEMVGWVERVTGQH 359

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
             SSD+YF+  LPSEL   DV  +     +LS LA+ YPA RA+ I+PA  L  
Sbjct: 360 IFSSDVYFVSNLPSELQGGDVLLICSAGFILSFLATVYPAWRAAKIEPAHALRY 413



>gi|52007738|ref|ZP_00335115.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Thiobacillus denitrificans
           ATCC 25259]
          Length = 385

 Score =  301 bits (771), Expect = 2e-80
 Identities = 142/385 (36%), Positives = 219/385 (56%), Gaps = 1/385 (0%)

Query: 31  TIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPG 90
             GIALGV  LIV LS MNGF+ EL  RIL V  H EI        +W+  L   Q+   
Sbjct: 1   MGGIALGVMALIVVLSVMNGFQEELRARILGVAAHLEISGPGDRLADWRSVLAQAQRNKD 60

Query: 91  IAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIII 150
           + + APY+N  G++ +G  +R   ++G+ P  E  ++     ++     + K GE  II+
Sbjct: 61  VVSGAPYVNAQGMLANGDMVRGAIIRGIVPGMENAVADFSRHMKAGRLTDLKPGEFGIIL 120

Query: 151 GKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSG-QLDHSFAMIPLA 209
           G  +A AL V  GD + ++ P  N     + P+  +  V GI +    + D   A+I L 
Sbjct: 121 GGELARALNVFPGDKLVLLTPQGNITPAGVMPRVKQFTVTGIFEAGMFEYDSGLALIHLQ 180

Query: 210 DAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIR 269
           DAQ+ L +G  VSG+ LK+ ++F A  + R+  +      Y+  W  ++   +R + + +
Sbjct: 181 DAQKLLRLGQDVSGVRLKLDELFRAPFVTRELAQTLTGDYYLTDWTQSHANFFRAVAIEK 240

Query: 270 AIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLF 329
            +M+L ++L++ VA FNIVSTLVMAV DK  DIA+LRTLGA+ G + AIF+  G   G+ 
Sbjct: 241 RMMFLILLLIVAVAAFNIVSTLVMAVTDKQSDIAILRTLGARPGSVMAIFIVQGAFIGVL 300

Query: 330 GSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALL 389
           G+  GV  GV ++L L  ++  IE++ G     +D+Y+I+ LPS+L W +V  +   +LL
Sbjct: 301 GAAIGVTGGVFLALNLETVVPIIERMAGMDLFPADVYYINELPSKLDWSEVTLIGGVSLL 360

Query: 390 LSLLASWYPARRASNIDPARVLSGQ 414
           +SLLA+ YP+ RAS I+PA  L  +
Sbjct: 361 ISLLATLYPSWRASRINPAEALRYE 385



>gi|52853542|ref|ZP_00145774.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Psychrobacter sp. 273-4]
          Length = 411

 Score =  301 bits (770), Expect = 4e-80
 Identities = 152/414 (36%), Positives = 246/414 (59%), Gaps = 3/414 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL+L IGLR++R  R  G +S IS+IS IG+ LGVAVLI  LS MNGF+REL  RIL
Sbjct: 1   MFRPLALFIGLRYTRAERSNGFISFISLISMIGLTLGVAVLITVLSVMNGFDRELKTRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +VP   + + +    +W++  D +++ P + A AP+I   G++ S   +  I V GV+P
Sbjct: 61  GMVPQATVTSTE-IIGDWKQLADKIKEDPEVVAVAPFIQLQGMLTSNGQVAGIMVTGVDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           + E+ +S +   +        K GE  I++G+G+  +L ++ GD V++++P ++P    +
Sbjct: 120 EYEKNVSIINEHMVEGNIDTLKNGEFGIVLGEGMVQSLGLQLGDKVTLVLPEASPSPAGV 179

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
            P+  R  + GI  +S ++D   A IP+ DA + L +     GI +K+ D+F A    + 
Sbjct: 180 IPRFKRFTLTGIFSISPEVDSLMAFIPMGDAAKLLRLPEGAQGIRMKLNDIFTAPMAAQK 239

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
           A  +    +Y   W  T+G ++  IQM +A++ L + L+I VA FNIVS+LVM V DK  
Sbjct: 240 AAAIAPEQLYPSDWTQTHGNLFGAIQMEKAMVGLLLFLIILVAAFNIVSSLVMLVTDKKA 299

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+L+T GA   LI  +F+  G++ G  G++ G I+GV+ +L ++ I+ +I +      
Sbjct: 300 DIAILKTFGASPRLITQVFMVQGVVIGFIGTIAGTILGVIFALTVSDILGFINQSFDLNL 359

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             +  YF+++LPS+L  +DV  +   + +LS LA+ YPARRA+ I PA+ L  +
Sbjct: 360 FDA--YFVNYLPSQLRLVDVVLITSASFVLSFLATVYPARRAAKIQPAQTLRYE 411



>gi|28198273|ref|NP_778587.1|   lipoprotein releasing system transmembrane protein [Xylella
           fastidiosa Temecula1]
 gi|28056343|gb|AAO28236.1|   lipoprotein releasing system transmembrane protein [Xylella
           fastidiosa Temecula1]
 gi|32129712|sp|Q87EF5|LOLC_XYLFT   Lipoprotein releasing system transmembrane protein lolC
          Length = 413

 Score =  300 bits (769), Expect = 4e-80
 Identities = 142/415 (34%), Positives = 232/415 (55%), Gaps = 3/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PLS+ IGLR+ R +RR G +S IS+ S +GIALGV VLI  L+ M+GF++E+ +R+L
Sbjct: 1   MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +  H  + A   P  +WQ A+      P +A AAPYI    L++ G   +   ++G+ P
Sbjct: 61  QMSAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQ-GERHQPAMMRGIVP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            QE ++S L   ++  +  + K GE  I++GK +A  L V  GD V +++  +       
Sbjct: 120 NQETKVSVLAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQTQTTPVGT 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  R  V+G+ ++   ++D   A++ + D Q+ + M   V+G+ LK+ D+ +A  +  
Sbjct: 180 MPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKIMRMDG-VTGVRLKLHDMDHAWDVAS 238

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D     N    +  W      +Y  ++M + +M + + L+I +  FN+VS+ VM V DK 
Sbjct: 239 DLAVRLNGPYLVSDWTRENANLYSSLKMEKTVMGILLSLIIAMGAFNLVSSQVMLVTDKQ 298

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLG     +  +F+  G L G+ G+L GVI GVV++  L  I++ IE      
Sbjct: 299 ADIAILRTLGLSPAGVMRVFMVQGSLIGIIGTLSGVIGGVVLTWNLERILKLIESTFNIT 358

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L  D+Y+I  LP+++ + DV  + + AL +S +A+ YPA RA+ I PA  L  +
Sbjct: 359 LLPEDVYYITGLPTDMQFPDVVVITLMALAMSFIATLYPAWRAARIQPAEALRYE 413



>gi|22996851|ref|ZP_00041094.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Xylella fastidiosa Ann-1]
          Length = 413

 Score =  300 bits (768), Expect = 5e-80
 Identities = 142/415 (34%), Positives = 232/415 (55%), Gaps = 3/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PLS+ IGLR+ R +RR G +S IS+ S +GIALGV VLI  L+ M+GF++E+ +R+L
Sbjct: 1   MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +  H  + A   P  +WQ A+      P +A AAPYI    L++ G   +   ++G+ P
Sbjct: 61  QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQ-GERHQPAMMRGIVP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            QE ++S L   ++  +  + K GE  I++GK +A  L V  GD V +++  +       
Sbjct: 120 NQETKVSVLAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQTQTTPVGT 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  R  V+G+ ++   ++D   A++ + D Q+ + M   V+G+ LK+ D+ +A  +  
Sbjct: 180 MPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKIMRMDG-VTGVRLKLHDMDHAWDVAS 238

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D     N    +  W      +Y  ++M + +M + + L+I +  FN+VS+ VM V DK 
Sbjct: 239 DLAVRLNGPYLVSDWTRENANLYSSLKMEKTVMGILLSLIIAMGAFNLVSSQVMLVTDKQ 298

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLG     +  +F+  G L G+ G+L GVI GVV++  L  I++ IE      
Sbjct: 299 ADIAILRTLGLSPAGVMRVFMVQGSLIGIIGTLSGVIGGVVLTWNLERILKLIESTFNIT 358

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L  D+Y+I  LP+++ + DV  + + AL +S +A+ YPA RA+ I PA  L  +
Sbjct: 359 LLPEDVYYITGLPTDMQFPDVVVITLMALAMSFIATLYPAWRAARIQPAEALRYE 413



>gi|22995331|ref|ZP_00039809.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Xylella fastidiosa Dixon]
          Length = 413

 Score =  299 bits (767), Expect = 7e-80
 Identities = 142/415 (34%), Positives = 232/415 (55%), Gaps = 3/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PLS+ IGLR+ R +RR G +S IS+ S +GIALGV VLI  L+ M+GF++E+ +R+L
Sbjct: 1   MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +  H  + A   P  +WQ A+      P +A AAPYI    L++ G   +   ++G+ P
Sbjct: 61  QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQ-GERHQPAMMRGIVP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            QE ++S L   ++  +  + K GE  I++GK +A  L V  GD V +++  +       
Sbjct: 120 NQEAKVSVLAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQTQTTPVGT 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  R  V+G+ ++   ++D   A++ + D Q+ + M   V+G+ LK+ D+ +A  +  
Sbjct: 180 MPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKIMRMDG-VTGVRLKLHDMDHAWDVAS 238

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D     N    +  W      +Y  ++M + +M + + L+I +  FN+VS+ VM V DK 
Sbjct: 239 DLAVRLNGPYLVSDWTRENANLYSSLKMEKTVMGILLSLIIAMGAFNLVSSQVMLVTDKQ 298

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLG     +  +F+  G L G+ G+L GVI GVV++  L  I++ IE      
Sbjct: 299 ADIAILRTLGLSPAGVMRVFMVQGSLIGIIGTLSGVIGGVVLTWNLERILKLIESTFNIT 358

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L  D+Y+I  LP+++ + DV  + + AL +S +A+ YPA RA+ I PA  L  +
Sbjct: 359 LLPEDVYYITGLPTDMQFPDVVVITLMALAMSFIATLYPAWRAARIQPAEALRYE 413



>gi|37680545|ref|NP_935154.1|   putative ABC transporter, integral membrane protein [Vibrio
           vulnificus YJ016]
 gi|37199293|dbj|BAC95125.1|   putative ABC transporter, integral membrane protein [Vibrio
           vulnificus YJ016]
          Length = 414

 Score =  297 bits (761), Expect = 3e-79
 Identities = 226/414 (54%), Positives = 310/414 (74%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   L+LLIG RFS+ ++R  MVS IS+ STIGIA+GVAV+I+GLSAMNGFEREL +R+L
Sbjct: 1   MFSSLALLIGRRFSQAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           +V+PH E+E V  P  NWQ  +      P + AAAPY+ FTGLVE G  L+A++V+GV P
Sbjct: 61  SVIPHAELEGVRAPVENWQSVMTQAVANPKVVAAAPYVKFTGLVERGNKLKAVEVRGVEP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             EQ +S +  F+   AW  F  G+ Q+I+G+GVA+ L V  GD+V+++IP +    K+ 
Sbjct: 121 DFEQAVSTMSQFIDQQAWSQFLPGQNQVIVGRGVANELGVDVGDYVTLLIPQTGESTKVQ 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
            PKRVR+ V G+L L+GQ+DH+  ++P+ADAQQY  +G  V+GIALK  DV NA  +VR+
Sbjct: 181 APKRVRVKVTGMLTLNGQIDHNLVLLPMADAQQYNHLGEGVTGIALKTNDVLNAQAIVRE 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
            G   + YVY++SW   +G++YRDIQ++R IMYL MVLVIGVACFNIVSTL+MAVKD++ 
Sbjct: 241 VGRQIDVYVYLRSWQQQFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRAS 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           +IA+LRT+GA DGLI+ IFVW G+ +G+ GS+ G ++GV+V+L LT +I+ +E++IGHQF
Sbjct: 301 EIAILRTMGAGDGLIKRIFVWQGVFSGVLGSVLGSVVGVLVALNLTTLIKGLERVIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS DIYF+DFLPS+L   DV  V  TA++LS++A+WYPA RA+ + PA VLS +
Sbjct: 361 LSGDIYFVDFLPSQLRLDDVLLVSGTAIVLSIVATWYPAARAAKLKPAAVLSSK 414



>gi|27361562|gb|AAO10470.1|   Conserved hypothetical protein [Vibrio vulnificus CMCP6]
 gi|27365415|ref|NP_760943.1|   hypothetical protein VV12082 [Vibrio vulnificus CMCP6]
          Length = 414

 Score =  297 bits (760), Expect = 4e-79
 Identities = 226/414 (54%), Positives = 310/414 (74%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   L+LLIG RFS+ ++R  MVS IS+ STIGIA+GVAV+I+GLSAMNGFEREL +R+L
Sbjct: 1   MFSSLALLIGRRFSQAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           +V+PH E+E V  P  NWQ  +      P + AAAPY+ FTGLVE G  L+A++V+GV P
Sbjct: 61  SVIPHAELEGVRAPVENWQSVMTQAVANPKVVAAAPYVKFTGLVERGNKLKAVEVRGVEP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             EQ +S +  F+   AW  F  G+ Q+I+G+GVA+ L V  GD+V+++IP +    K+ 
Sbjct: 121 DFEQAVSTMSQFIDQQAWSQFLPGQNQVIVGRGVANELGVDVGDYVTLLIPQTGESTKVQ 180

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
            PKRVR+ V G+L L+GQ+DH+  ++P+ADAQQY  +G  V+GIALK  DV NA  +VR+
Sbjct: 181 APKRVRVKVTGMLTLNGQIDHNLVLLPMADAQQYNHLGEGVTGIALKTNDVLNAQAIVRE 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
            G   + YVY++SW   +G++YRDIQ++R IMYL MVLVIGVACFNIVSTL+MAVKD++ 
Sbjct: 241 VGRQIDVYVYLRSWQQQFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRAS 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           +IA+LRT+GA DGLI+ IFVW G+ +G+ GS+ G ++GV+V+L LT +I+ +E++IGHQF
Sbjct: 301 EIAILRTMGAGDGLIKRIFVWQGVFSGVLGSVLGSVVGVLVALNLTTLIKGLERVIGHQF 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS DIYF+DFLPS+L   DV  V  TA++LS++A+WYPA RA+ + PA VLS +
Sbjct: 361 LSGDIYFVDFLPSQLRVDDVLLVSGTAIVLSIVATWYPAARAAKLKPAAVLSSK 414



>gi|45915776|ref|ZP_00197222.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Mesorhizobium sp. BNC1]
          Length = 427

 Score =  297 bits (760), Expect = 4e-79
 Identities = 124/415 (29%), Positives = 212/415 (51%), Gaps = 3/415 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                 L+  R+ R RR+  +VS+I++IS +GI LGVA LIV ++ MNGF  EL  RIL 
Sbjct: 14  FSYFERLVAWRYLRSRRKETVVSVIALISFLGIMLGVATLIVVMAVMNGFRGELLTRILG 73

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANL-RAIQVKGVNP 120
           V  H  ++ VD P +++      + +VPG+  A P +    L    +       V+GV  
Sbjct: 74  VNGHIIVQPVDSPLSDYDAVAGRIAQVPGVRDAMPIVEGQVLASGRSGAGSGALVRGVRA 133

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +   ++  +   ++  +  +F AG Q + IG  +A +L +  GD ++++ P  +      
Sbjct: 134 EDLTKIDLVAKNIRVGSLVDFAAG-QGVAIGSRMAQSLGLAVGDSITLVAPEGDVTPFGT 192

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+     V  + ++   + D S   +PL +AQ + ++   V  I +      N   L  
Sbjct: 193 TPRVKSYPVTAVFEIGMSEYDASIIYMPLEEAQLFFNVEGLVQFIEVFADHPDNVGTLRP 252

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
              E     V I  W       +  +Q+ R +M++ + +++ VA  NI+S ++M VKDKS
Sbjct: 253 LVEEAAMRPVSISDWRQRNQVFFSALQVERNVMFMILTMIVLVAALNIISGMIMLVKDKS 312

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA  G I  IF+  G   G+ G+  G+++G ++ L +  I E+   L G  
Sbjct: 313 HDIAILRTMGATSGSIMRIFLMAGASIGVAGTFAGLVLGSMLCLNVESIREFFTWLSGTV 372

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
               ++YF+  LP+++   +   V++ AL+LS LA+ +PA RAS +DP   L  +
Sbjct: 373 IFDPEVYFLSQLPADMESGETISVVLMALILSFLATLFPAWRASRLDPVDALRYE 427



>gi|23012408|ref|ZP_00052501.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 414

 Score =  296 bits (758), Expect = 9e-79
 Identities = 128/414 (30%), Positives = 208/414 (50%), Gaps = 3/414 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                 ++  R+ R RR+ G +S+I+  S  GI LGVA LIV ++ MNGF  EL  RIL 
Sbjct: 3   FNSFERMVAFRYLRARRKEGFISVIAGFSLAGIGLGVATLIVVMAVMNGFRHELLGRILG 62

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +  H  +     P + +    + ++K+PG+    P         S        V+GV  +
Sbjct: 63  INGHIGVYGSGAPLSGYDPLAESIRKLPGVTKVIPTAEGQVFATSAGGGTGAIVRGVRAE 122

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
                       +G+      AG+  ++IGK +A+ L V+ GD VS++ P  N       
Sbjct: 123 DLLTRPVFQKKYRGN--PADFAGDDAVVIGKRLAEKLGVRIGDSVSLISPKGNVTAFGTV 180

Query: 182 PKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           P+     V G   +   + D  F  +PL  AQ Y  +   V+ I + + +     +  + 
Sbjct: 181 PRMRGYRVVGTFDVGMFEYDSGFVFMPLEAAQTYFRLPQLVTQIEVFLENPDMVPETRKA 240

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
             ++T S   I  W       +  IQ+ R +M+L + L+I VA FNI+S+L+M VKDK  
Sbjct: 241 IWDLTGSSATIYDWQQANANFFNAIQVERNVMFLILTLIILVAAFNIISSLIMLVKDKGR 300

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRT+GA  G+I  IF   G   G+ G++ G ++GV  +  +  I ++I+ +IG + 
Sbjct: 301 DIAILRTMGATRGMILRIFFLAGASVGVVGTVAGTLLGVAFATNIENIRQFIQSIIGREL 360

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            +++IYF+  LP+ +   +V  V++ AL LS  A+ YPA RA+ +DP   L  +
Sbjct: 361 FAAEIYFLTQLPARVETREVVTVVLMALGLSFAATIYPAWRAAKLDPVEALRYE 414



>gi|48832907|ref|ZP_00289933.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Magnetococcus sp. MC-1]
          Length = 413

 Score =  294 bits (754), Expect = 2e-78
 Identities = 141/415 (33%), Positives = 232/415 (55%), Gaps = 3/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M       +GLR+ R +R    +S I+ +S  GIALGVA LIV L+ M GF+ EL  +IL
Sbjct: 1   MFSSFEWRVGLRYLRAKRSQRFISAITALSVAGIALGVAALIVVLAVMTGFQGELQRQIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            VV H  +++      + +  L  VQ  P +  AAP++    L+ +G     I ++GV+P
Sbjct: 61  GVVSHVVVQSYGGSMEDVEGVLRKVQSRPNVTGAAPFVLANALIYNGGQAYGIALRGVDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           ++E+ +S L   +              +++G+ +A  L V   D +++M+P  N      
Sbjct: 121 EREKGVSNLHVNMVRGDVAAMA--GFGVVLGESLARNLGVGLNDRITLMVPKGNVTPAGT 178

Query: 181 QPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  R  VAGI      + D + A I + DAQ+ L +G SV+GI +K      A  + +
Sbjct: 179 VPRVKRFRVAGIFDSGMHEYDTNLAYIHINDAQKLLRLGESVTGIEVKTPHPDLAMGVRQ 238

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D  +  + + +I+ W+      +  I++ +A M++ + LV+ VA FNI+S+L+M V +K 
Sbjct: 239 DLEKQLSGHFWIRDWMQMNRNFFNAIKLEKATMFVILSLVVLVAAFNIISSLIMVVMEKG 298

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+L+T+GA+   I AIF+  G + G+ G+L G+ +G+V++  L   I WIE+  G Q
Sbjct: 299 KDIAILKTMGARSHSIMAIFLINGGIIGVGGTLAGLALGLVLAENLERTIGWIERTFGLQ 358

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L  D+YFID LP+++   D+F++ V +L +SLL++ YPA RAS +DP   L  +
Sbjct: 359 ILHGDVYFIDKLPAQVLPSDLFWITVISLSISLLSTLYPAWRASRVDPVEALRYE 413



>gi|21231570|ref|NP_637487.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|21113256|gb|AAM41411.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 416

 Score =  294 bits (752), Expect = 4e-78
 Identities = 140/415 (33%), Positives = 228/415 (54%), Gaps = 3/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+ + IGLR+ R +RR G +S IS+ S +GIALGV VLI  L+ M+GF++E+ +R+L
Sbjct: 4   MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 63

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +  H  + A   P  +W+ A++     P IA AAPYI    L++     +   V+GV P
Sbjct: 64  QMAAHATVSAEGAPMQDWRHAVEVASADPRIAGAAPYIETESLLQGPRK-QPAIVRGVIP 122

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E ++S L   +Q  +  +   G   I+IGK +A  L V  GD + +++ ++       
Sbjct: 123 SEEAKVSVLAKKMQQGSVDSLTPGSYNIVIGKELALWLGVDVGDSIVVLLSDTQATPLGA 182

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  R  V+GI +    ++D   A++ + D  + L M   V+G+ L++ D+  A  + R
Sbjct: 183 MPRLKRFTVSGIFEAGYNEIDRGLAVVNMEDLARVLRMDG-VTGVRLRLHDMDQAFTVAR 241

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D          +  W      +Y  ++M + +M + + L++ +  FN+VS+ VM V DK 
Sbjct: 242 DLALKLRGPYRVSDWTQENANLYHSLKMEKTVMGILLSLIVAMGAFNLVSSQVMLVTDKQ 301

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLG   G +  +F+  G L G  G++ GVI G+V++L L  I+  IE +   +
Sbjct: 302 ADIAILRTLGLSPGGVMQVFMVQGSLIGFMGTIMGVIGGIVLTLNLERILGAIEAVFSVK 361

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L  D+Y+I  LP+++   DV  + V AL++S LA+ YPA RAS   PA  L  +
Sbjct: 362 LLPEDVYYITGLPTDMQTQDVVVITVVALVMSFLATLYPAWRASRTQPAEALRYE 416



>gi|24373812|ref|NP_717855.1|   lipoprotein releasing system transmembrane protein LolC, putative
           [Shewanella oneidensis MR-1]
 gi|24348207|gb|AAN55299.1|   lipoprotein releasing system transmembrane protein LolC, putative
           [Shewanella oneidensis MR-1]
          Length = 416

 Score =  294 bits (752), Expect = 4e-78
 Identities = 179/416 (43%), Positives = 266/416 (63%), Gaps = 2/416 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL+L IG RF R R+    +S IS  ST GIALGVAVLI+ LSAMNGFEREL  R+L
Sbjct: 1   MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEQRLL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V+   ++  V++P  +W+       ++ GI AAAP+I   GLV+     + + V G++P
Sbjct: 61  GVISQADVVGVNEPIADWRAVEQTALQIEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE--HK 178
           +QE ++S L  F+  + W++    +  I++G+ +   L ++ GD +++ + + +PE    
Sbjct: 121 EQEAKVSTLSQFMSPETWQSLSEDDNHIVLGESLLKKLGLEVGDTLALYVQDLDPEHAGS 180

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLV 238
           L   K  R  V+G+ +L G+L+ + A IP+  A   L++   V+G+ + +T VF A   +
Sbjct: 181 LRAAKSHRFVVSGVYRLGGELELTTAYIPMRYAANILNLHQGVTGVRISVTQVFEAPAKI 240

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           R+ G   N  VYI  W  T G++Y+DIQ++R IMYL +VLVIGVACFNIVSTLVMAV+DK
Sbjct: 241 RELGYALNQSVYISDWTRTQGHLYQDIQLVRTIMYLVLVLVIGVACFNIVSTLVMAVRDK 300

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
           + +IA+L T+G     +  IF+  G L GL G   G +IG+  ++ L+ I   IE+L+G 
Sbjct: 301 ASEIAILMTMGLSRLSVMGIFMVQGALNGLVGCALGGVIGIATAINLSAIARDIEQLLGI 360

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           Q LS+D+YF+DFLPSELH  DV  V+ TA ++SL+A+ YPA +AS I PA+ L+G+
Sbjct: 361 QLLSADVYFVDFLPSELHMADVSLVIATAFVMSLIATLYPAWKASRIGPAQALAGR 416



>gi|49474194|ref|YP_032236.1|   Lipoprotein releasing system transmembrane protein lolC [Bartonella
           quintana str. Toulouse]
 gi|49239698|emb|CAF26073.1|   Lipoprotein releasing system transmembrane protein lolC [Bartonella
           quintana str. Toulouse]
          Length = 422

 Score =  293 bits (750), Expect = 6e-78
 Identities = 122/415 (29%), Positives = 217/415 (52%), Gaps = 3/415 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                 +I  R+    ++  + S+IS+IS IGI LGV  L+V ++ MNGF  EL NRIL 
Sbjct: 9   FSSYEWMIAFRYMIPNKKHVVASVISIISLIGIMLGVFALVVVMAVMNGFRTELLNRILG 68

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNP 120
           +  H  ++ ++  +++++  +  ++ V G+  A P I    LV+          V+G+  
Sbjct: 69  MNGHLIVQTINSGFSDYKTLIPSLESVDGVKFALPVIEGQALVQGDLQGGSGALVRGMRK 128

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           Q  ++L  +   ++  +   F   E  ++IG G+A+ L++  G  + I+ P+ +     +
Sbjct: 129 QDLEKLKTVSQNIKLGSLAQFDKEE-GVVIGSGLAEKLRLTVGSDLRIITPDGDATPFGV 187

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+     V  I ++   + D  F  +PL +AQ + ++G  V  + L + D    +++  
Sbjct: 188 TPRVKAYKVIAIFEVGMSEYDSIFVFMPLYEAQMFFNLGDKVQSLELFLNDPDAVDQIKP 247

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
              +  +  VY+  W       +  +Q+ R +M+  + L++ VA  NIVS L+M VKDKS
Sbjct: 248 IVEKAIDQQVYLIDWRMRNQAFFSALQIERNVMFFILSLIVLVAALNIVSGLIMLVKDKS 307

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA+   I  IF+  G++ GL G+L G+I GV+ ++ +  I +++  L    
Sbjct: 308 HDIAILRTMGAQKSTILRIFIVTGMMIGLVGTLLGLIFGVIATVNINHIQDFVSWLFNVD 367

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             +  +YF+  LP++L W     V   AL LS LA+  PA RA+ +DP + L  +
Sbjct: 368 VFNPQLYFLTKLPAQLDWRQTVMVAGMALFLSFLAALIPAWRAAKLDPVQALRYE 422



>gi|16126173|ref|NP_420737.1|   hypothetical protein CC1930 [Caulobacter crescentus CB15]
 gi|13423385|gb|AAK23905.1|   conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|25321135|pir||E87488   conserved hypothetical protein CC1930 [imported] - Caulobacter
           crescentus
          Length = 426

 Score =  292 bits (748), Expect = 1e-77
 Identities = 116/417 (27%), Positives = 206/417 (49%), Gaps = 4/417 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                  +  R+   +R+ G V+LISVIS   + L V  LI  +S MNGF  EL  RIL 
Sbjct: 10  FSRWERSVARRYLFAKRKNGGVALISVISFSAVMLAVFALITVMSVMNGFRAELLGRILG 69

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
              H   ++      +    +  ++  PG+  AAP +    +V     +    V+GV   
Sbjct: 70  FNGHLYAQSPLINGPDRDTIIRRIKAAPGVIQAAPMVEAQAMVIGPTQVTGAIVRGVTTS 129

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQ---IIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
             + +S +   ++  +   F  GE     ++IG+ +A  L V+ GD ++I+ P+      
Sbjct: 130 DLRHMSLISGNIKNGSMEGFGQGEYGGDIVLIGERMAQTLGVQPGDPITIISPSGPATAF 189

Query: 179 LMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
               +     V G+  +   Q D +F  +PL  AQ +    ++V  + +K+ D   A +L
Sbjct: 190 GSSTREKNYIVGGVFSVGMSQFDEAFIYMPLEQAQLFFGRDTTVDYVEIKVEDPDKAKEL 249

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
            +     +     +  W+      +  +Q+ R +M L +  ++ +A  NI+S+LVM VK+
Sbjct: 250 KQAVEIASGPGALVNDWMDKNHSYFTALQVERKVMRLILFCIVAIATLNIISSLVMLVKN 309

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K  DIA+LRT+GA  G +  IF+  G   G+ G+LCG+ +GV+    +TPI  ++E   G
Sbjct: 310 KGKDIAILRTMGASQGAVLRIFLMAGASIGVAGTLCGLALGVLFCAYITPIQNFVEWATG 369

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
               ++D+Y +  +P+++ W +V  +++ +  +S+LA+  PA RAS +DP   L  +
Sbjct: 370 TSVFNADVYMLSHIPAKIDWREVGGIVLASAAMSILATLPPALRASRLDPVEALRYE 426



>gi|15074219|emb|CAC45866.1|   HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti]
 gi|15965040|ref|NP_385393.1|   HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti 1021]
          Length = 408

 Score =  292 bits (748), Expect = 1e-77
 Identities = 121/409 (29%), Positives = 210/409 (51%), Gaps = 3/409 (0%)

Query: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 67
           ++  R+ R RR+   +S+I+  S IGI LGV  LI+ ++ MNGF  EL +RIL +  H  
Sbjct: 1   MVAWRYLRSRRKEAFISVIAGFSFIGIMLGVGTLIIVMAVMNGFRTELISRILGMNGHMI 60

Query: 68  IEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVES-GANLRAIQVKGVNPQQEQRL 126
           ++ +D P TN+ +       VPG+  A P +    L +  G       V+G+      +L
Sbjct: 61  VQPLDGPLTNYADLATRFSAVPGVTMAIPIVEGQVLAQGLGDASTGALVRGIRADDLTKL 120

Query: 127 SALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVR 186
            ++   +Q      F +G   + IG  +A+ L ++ G  +++  PN +     M P+   
Sbjct: 121 KSISEHIQSGDLVGFASGS-GVAIGSRMAEQLGIRVGGTITLTSPNGDVTPMGMNPRVKA 179

Query: 187 LHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVT 245
             V+ I ++   + D +   +PL +AQ Y +    V  I +        ++L +   +  
Sbjct: 180 YTVSAIFEMGMSEYDATIIFMPLEEAQLYFNAEGLVQSIEIFAEHPDAVDELRKPVEDAA 239

Query: 246 NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
              ++I  W       +  +++ R +M++ + L++ VA  NI+S L+M VKDK  DIA+L
Sbjct: 240 GRQIFITDWRERNRTFFSALEVERNVMFMILTLIVLVAALNIISGLIMLVKDKGSDIAIL 299

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
           RT+GA  G +  IF   G   G+ G++ GV +GVVV L +  I ++   + G      ++
Sbjct: 300 RTMGATSGSVMRIFFMTGAAIGVTGTIAGVALGVVVCLNIESIRQFFSWVSGATLFDPEL 359

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           YF+  LP++++  +   V+V AL LS LA+ +PA RAS +DP + L  +
Sbjct: 360 YFLSQLPADMNADETVTVVVMALALSFLATIFPAWRASRLDPVQALRYE 408



>gi|29654316|ref|NP_820008.1|   lipoprotein ABC transporter, permease protein, putative [Coxiella
           burnetii RSA 493]
 gi|29541583|gb|AAO90522.1|   lipoprotein ABC transporter, permease protein, putative [Coxiella
           burnetii RSA 493]
          Length = 414

 Score =  291 bits (746), Expect = 2e-77
 Identities = 150/416 (36%), Positives = 232/416 (55%), Gaps = 4/416 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL+L +GLR++R +RR   +S IS++S +GIALGVAVLI  LS MNGF+ E+     
Sbjct: 1   MIRPLALYVGLRYTRAKRRNHFISFISLVSMLGIALGVAVLITVLSVMNGFDYEIRTHFF 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           A+ P   +         W E    +   P + A+AP++   GL+ +   +    V GV P
Sbjct: 61  ALAPQVTVMTGQNIEKTWPELQKTIASNPEVVASAPFVTGMGLLSNEGIVSGATVLGVVP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            QE+++S L   + G    +   G   II+G+ +AD L +  GD VS+  P +      +
Sbjct: 121 SQEKKVSQLDGKLVGGKLSSLNPGSYNIILGRKLADQLGLSIGDKVSLFTPQTTTTPLGI 180

Query: 181 QPKRVRLHVAGIL--QLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLV 238
            P+  R  ++GI   +     D   A I + D  +    G   SG+ +K+ +++ A  + 
Sbjct: 181 FPQFRRFTISGIFSTKSGFGFDAGIAYINMQDGFRLFSQG--ASGLHIKIKNLYQAQSVT 238

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +   ++      + +W   +G  ++ I M + IM++ ++L++GVA FN+VSTLVM V DK
Sbjct: 239 QQLQKLLPGEFIVTNWTEQFGSFFKAIAMEKTIMFVILLLIVGVAIFNLVSTLVMVVNDK 298

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             DIA+LRTLGA    I +IFV  G + G+ G+L GVI GV++++  T I+  I+++   
Sbjct: 299 RADIAILRTLGASPRTIMSIFVIQGAIVGIVGTLIGVIGGVILAVNATAIVNGIQQIFHV 358

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           QFL S IYF++FLPS L WLDV  V + A  LSL+A+ YPA  A   +PA  L  +
Sbjct: 359 QFLKSSIYFVNFLPSRLQWLDVLNVSLIAFALSLIATIYPAFIAFRTEPAEALRYE 414



>gi|15602427|ref|NP_245499.1|   hypothetical protein PM0562 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720828|gb|AAK02646.1|   unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 417

 Score =  291 bits (745), Expect = 2e-77
 Identities = 212/417 (50%), Positives = 282/417 (67%), Gaps = 7/417 (1%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M     I  R+ R +++  +VSLIS  S+IGIALGVAVLIVGLSAMNGFERELN RILAV
Sbjct: 1   MNTPFFISWRYQRSKQKNRLVSLISAFSSIGIALGVAVLIVGLSAMNGFERELNQRILAV 60

Query: 63  VPHGEIEAVDQ-----PWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           VPH EI A            WQ  +  + +   I   +PY+ FT LVE+G  L+ +QVKG
Sbjct: 61  VPHVEIMAYPNEKGTSSIKPWQPLVKTLAQHEQIDGISPYVTFTALVENGTKLKVVQVKG 120

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
           V    + ++SAL  FV  + W+ F+     +I+G G+A  L V  GDWVS++I   N ++
Sbjct: 121 VEKSAQDQVSALGQFVLDEGWKVFEQQS-GLILGYGIARDLDVVAGDWVSLLISPPNEQN 179

Query: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANK 236
           +L QP R R+ V+GIL+L GQLDHS+A++PL  AQ  L +    V G+ LK+   F    
Sbjct: 180 QLAQPIRHRIQVSGILRLEGQLDHSYALLPLTQAQTLLGISTDEVHGVELKVKQPFQVQT 239

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           L     +     +Y + WI  +GYMYRDIQ+IR++MY+AMVLVIGVACFNI+STL+MAVK
Sbjct: 240 LTFPMLQDYPQALYAQHWIHKFGYMYRDIQLIRSVMYIAMVLVIGVACFNIISTLIMAVK 299

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
           DK GDIA++RTLGA +  I+ IF+WYGL AG+ G L G+ +G++++L LT II+ +E L+
Sbjct: 300 DKQGDIAIMRTLGANNRFIKQIFIWYGLQAGMKGCLIGIFLGIILALNLTSIIQGVEYLL 359

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
           G + LS  IYF+DFLPSELHW D+  V  +AL+LSLLAS YPA RA+ + PA+VLS 
Sbjct: 360 GRKLLSDGIYFVDFLPSELHWQDILLVFCSALILSLLASLYPANRAAKLQPAQVLSH 416



>gi|54032009|ref|ZP_00364141.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Polaromonas sp. JS666]
          Length = 418

 Score =  291 bits (745), Expect = 3e-77
 Identities = 132/419 (31%), Positives = 238/419 (56%), Gaps = 6/419 (1%)

Query: 1   MAMPLSLLIGLRFSRGRR---RGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M +P  L++G R++R  R   R G +S IS +S +GIALGVA LI+ LS MNGF++E+ +
Sbjct: 1   MQIPYELILGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60

Query: 58  RILAVVPHGEIEAVDQP-WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
           R+L V+ H E+ A +     + Q+ L  ++  P +  AA +I    L+  G +++   V+
Sbjct: 61  RMLGVISHIEVFAPNGAALPDPQKTLAEIKANPQVVGAATFIAAQALLARGEDMKGTLVR 120

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           G++P  E +++ L   ++  A+    +G   +++G  +A ++ V++GD V+++ P+    
Sbjct: 121 GIDPALEGQVTDLAVQLKDTAFPKLVSGGFGVVLGGELARSMGVREGDTVTLIAPSGQVT 180

Query: 177 HKLMQPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNAN 235
              + P+  ++ V G       + D +  M+   DA +   +    +GI +K+ D+  A 
Sbjct: 181 PAGVVPRLKQMTVVGTFDSGHFEYDSALVMLHQDDAARIFRLEG-PTGIRIKLKDLHQAR 239

Query: 236 KLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAV 295
           ++  +        + I+ W       +  +Q+ + +M++ + L++ VA FN+VSTLVM V
Sbjct: 240 EVALELSRSLTGDLLIRDWTRQNKTWFAAVQLEKRMMFIILTLIVAVAAFNLVSTLVMTV 299

Query: 296 KDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKL 355
            DK  DIA+LRTLGA    I  IF+  G L G+ G+  G+++G+ ++L +  I+  +E+L
Sbjct: 300 TDKRADIAILRTLGASPQSIMKIFMVQGALVGVIGTFSGLLLGLGIALNIDVIVPALERL 359

Query: 356 IGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           +   FL  DIY I  +PSE  + D+  ++V +L+L+ LA+ YP+ RAS ++PA  L  +
Sbjct: 360 LNASFLPKDIYLISRMPSEPQYADIMPIVVISLVLAFLATIYPSWRASQVNPAEALRYE 418



>gi|17935189|ref|NP_531979.1|   ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|17739696|gb|AAL42295.1|   ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15156341|gb|AAK87083.1|   AGR_C_2376p [Agrobacterium tumefaciens str. C58]
 gi|25321157|pir||B97516   hypothetical protein AGR_C_2376 [imported] - Agrobacterium
           tumefaciens (strain C58, Cereon)
 gi|25321159|pir||AI2734   ABC transporter, membrane spanning protein Atu1289 [imported] -
           Agrobacterium tumefaciens (strain C58, Dupont)
 gi|15888617|ref|NP_354298.1|   hypothetical protein AGR_C_2376 [Agrobacterium tumefaciens str.
           C58]
          Length = 435

 Score =  291 bits (744), Expect = 3e-77
 Identities = 121/415 (29%), Positives = 212/415 (51%), Gaps = 3/415 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                 ++  R+ R RR+   +S+I+  S +GI LGVA LI+ ++ MNGF  EL +RIL 
Sbjct: 22  FSAFERMVAWRYLRSRRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELISRILG 81

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAI-QVKGVNP 120
           +  H  ++ +DQP+ N+ E       VPG+  A P +    L        +   V+GV  
Sbjct: 82  INGHMIVQPIDQPFNNYDELAKKFSAVPGVTMALPLVEGQTLASGRGGAGSGALVRGVRQ 141

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +   ++  + + ++      F AG+  +++G  +A  L V  GD ++++ P  +     +
Sbjct: 142 EDIDKIKEVATNIKTGDLVGFMAGD-GVLVGSRLASQLGVTAGDDITLISPEGDVTPMGI 200

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+     ++G+ ++   + D S   +PL++AQ Y +    V  I L ++   + + +  
Sbjct: 201 NPRVKSYKISGVFEIGMSEYDASMIYMPLSEAQLYFNANGIVQSIELYVSRPDDVDGIRP 260

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
              +     +YI  W       +  +Q+ R +M++ + L++ VA  NI+S L+M VKDK 
Sbjct: 261 LVEQAAERQIYITDWRQRNQTFFSALQVERNVMFMILTLIVLVAALNIISGLIMLVKDKG 320

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA  G +  IF   G   G  G+  GV +GV+V L +  I ++   + G  
Sbjct: 321 SDIAILRTMGASSGAVMRIFFMTGAAIGTVGTFAGVALGVLVCLNVESIRQFFSWVSGTV 380

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                +YF+  LP+E+   +   V++ AL LS LA+ +PA RAS +DP + L  +
Sbjct: 381 LFDPQLYFLSQLPAEMDLSETITVVIMALTLSFLATIFPAWRASKLDPVQALRYE 435



>gi|46312832|ref|ZP_00213425.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Burkholderia cepacia
           R18194]
          Length = 417

 Score =  291 bits (744), Expect = 3e-77
 Identities = 141/418 (33%), Positives = 231/418 (55%), Gaps = 5/418 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRRG---GMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNN 57
           M +P    IGLR++RG RR    G VS I+  +  GIALGVA LIV LS MNGF  E+ +
Sbjct: 1   MKLPFEWQIGLRYARGGRRSAGDGFVSFIAGAAMAGIALGVAALIVVLSVMNGFRTEVRD 60

Query: 58  RILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           R+L+V+ H EI +      +W+       + P + A APY++   L+ +  ++  + ++G
Sbjct: 61  RMLSVLAHVEIFSPTGAMPDWRLTAHESLQNPAVRAVAPYVDAQALLTNAGSVTGVALRG 120

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
           ++P  E R+S +   ++         GE  I++G  +ADAL VK GD ++   P +    
Sbjct: 121 IDPVLEPRVSEIARKLKTGRLDALVPGEMGIVLGSALADALHVKIGDRITFFAPGNRARI 180

Query: 178 KLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANK 236
               P+  + +V G  +    Q D + A I L DAQ   ++  + +GI L++ D+  A  
Sbjct: 181 GDALPQFRQFNVVGTFESGHYQYDSALAYIHLRDAQTLFNV-RAPTGIRLRLDDLQRAPD 239

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           +  +     +  +YI+ W       +   ++ + ++ L ++L++ VA FN+VS+LVM V 
Sbjct: 240 VALELSRTLSGDLYIRDWTRQNRTWFEAERLQKRMLSLILMLIVAVAAFNLVSSLVMTVT 299

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
            K GDIA+LRTLGA  G I  IF   G+  GL G+L GV +G  +++ +  ++  IE+L+
Sbjct: 300 QKQGDIAILRTLGAPPGSIMKIFAIQGMTIGLAGTLAGVALGCAIAVSIPWVLPAIEQLL 359

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           G +FL+  +YF+  LPS+L   DV  +   A L+S +A+ YP+ RA+ + PA  L  +
Sbjct: 360 GIRFLTPSVYFLSSLPSKLAATDVIEIAAAAFLMSCVATLYPSWRAARVRPAEALRDE 417



>gi|49475641|ref|YP_033682.1|   Lipoprotein releasing system transmembrane protein lolC [Bartonella
           henselae str. Houston-1]
 gi|49238448|emb|CAF27676.1|   Lipoprotein releasing system transmembrane protein lolC [Bartonella
           henselae str. Houston-1]
          Length = 422

 Score =  290 bits (743), Expect = 4e-77
 Identities = 120/415 (28%), Positives = 216/415 (52%), Gaps = 3/415 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                 +I  R+    ++  + S+IS+IS +GI LGV  L+V ++ MNGF  EL NRIL 
Sbjct: 9   FSSYEWMIAFRYMIPNKKHVVASVISIISLVGIMLGVFALVVVMAVMNGFRTELLNRILG 68

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNP 120
           +  H  I+ ++  ++++   +  ++ V G+  A P I    LV+          V+G+  
Sbjct: 69  MNGHLIIQTINSGFSDYNNLIPSIESVNGVKFALPVIEGQALVQGELQGGSGALVRGMRK 128

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           Q  ++L  +   ++  +   F   E  + IG  +A+ L +  G  + I+ P+ +     +
Sbjct: 129 QDLEKLKTVSENIKLGSLAQFDQEE-GVAIGISLAEKLGLTIGSDLRIITPDGDETPFGV 187

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+     V  I ++   + D  F  +PL +AQ + ++G+ +  + L + D  + +++  
Sbjct: 188 TPRVKAYKVVAIFEVGMSEYDSIFVFMPLHEAQAFFNLGNKIQSLELFLNDPDSVDRIKP 247

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
              ++ +  VY+  W       +  +Q+ R +M+  + L++ VA  NI+S L+M VKDKS
Sbjct: 248 ILEKLIDQQVYLIDWRTRNQAFFSALQIERNVMFFILSLIVLVAALNIISGLIMLVKDKS 307

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA+   I  IF+  G++ GL G+L G+I GV+ +  +  I ++I  L    
Sbjct: 308 HDIAILRTMGAQQSAILRIFIVTGMMIGLIGTLLGLIFGVIATANINHIQDFISWLFNVD 367

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             +  +YF+  LP+++ W     V V AL LS LA+  PA RA+ +DP + L  +
Sbjct: 368 VFNPQLYFLTKLPAKIEWGQTVMVAVMALFLSFLAALIPAWRAAKLDPVQALRYE 422



>gi|54295131|ref|YP_127546.1|   hypothetical protein lpl2211 [Legionella pneumophila str. Lens]
 gi|53754963|emb|CAH16451.1|   hypothetical protein [Legionella pneumophila str. Lens]
          Length = 415

 Score =  290 bits (743), Expect = 4e-77
 Identities = 150/417 (35%), Positives = 242/417 (58%), Gaps = 5/417 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL+L IGLR++R R++   VS IS+ S +GI +GV VLI  LS MNGF++E++ R  
Sbjct: 1   MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            + P   I   D+  ++W E +  V+ +PGI A APY+   GL+     +  I + G+ P
Sbjct: 61  GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           ++E+ ++ L   +      N K     II+GKG+AD+L V  GD V+IMIP +      M
Sbjct: 121 EKEESVTHLNKKLLAGNMDNLKH--FGIILGKGLADSLGVMIGDKVTIMIPQATVTPAGM 178

Query: 181 QPKRVRLHVAGILQ--LSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKL 237
            P+  R  VAG+         D   A I + DAQ+ + M  + VSGI +K+ +V+ A +L
Sbjct: 179 IPRFKRFTVAGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPEL 238

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
             +  ++      + +W   +G  +  ++M + +M++ ++L+I VA FN+VS+LVM V D
Sbjct: 239 SYELSDLLGEGYQVGNWTQQFGAFFEAVKMEKTMMFMILLLIIAVAAFNLVSSLVMVVND 298

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K  +IA+LRT+GA    I  +F+  G++ GL G++ G++ G+V++   T I+  ++    
Sbjct: 299 KQAEIAILRTIGATPSTILWVFIVQGMMVGLVGTILGLLGGLVLANNATEIVNALQSFFQ 358

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            + LSS IYF+D+LPS++ + D++ V   ALL+S  A+ YPA RAS    A  L  +
Sbjct: 359 VKVLSSSIYFVDYLPSKIMFRDLWQVCAMALLMSFAATIYPAWRASKTVIAEALHYE 415



>gi|58038567|ref|YP_190531.1|   Lipoprotein releasing system transmembrane protein [Gluconobacter
           oxydans 621H]
 gi|58000981|gb|AAW59875.1|   Lipoprotein releasing system transmembrane protein [Gluconobacter
           oxydans 621H]
          Length = 416

 Score =  290 bits (742), Expect = 5e-77
 Identities = 128/417 (30%), Positives = 219/417 (52%), Gaps = 4/417 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M      ++  R+ R RR     S+I++ S IGIALGVA LI+ +S MNGF+ +L  RIL
Sbjct: 1   MFGRFERMVAGRYLRARRGERFASIIAIFSLIGIALGVATLIIVMSVMNGFKADLMGRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +     +    +P   ++  +  +++VPG+ +  P    T LVE+G      +++GV+ 
Sbjct: 61  GLHGDLTVYGYGRPIEAYENDVAAIRQVPGVKSVIPMAQGTVLVEAGRFSSGAEMQGVSQ 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           Q  +  +AL S +   +  +F  G+  + IG  +AD   +  G  ++++ P+        
Sbjct: 121 QSLRDWTALSSGIIAGSLNDF-TGDNAVAIGTTMADRAGLTIGSPITLLSPDGQATPFGT 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQ-YLDMGSSVSGIALKMTDVFNANKLV 238
            P+    HVA I   +    + S  ++PL  AQ+  +   S+VS I +   D  N     
Sbjct: 180 MPRVKTYHVAVIFDANWNDYNSSIVLMPLPAAQKFLMLGPSAVSLIQVSTADPSNVQPTR 239

Query: 239 RDAGEVTNSY-VYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
           +          + +  W  +       + + + +M+L + L+I VA FN++S+L+M VKD
Sbjct: 240 KAIAARLEDPRLRVLDWTQSANGFLDAVTVEQNVMFLILTLIILVAAFNVISSLIMMVKD 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K+ DIAVLRTLGA  G I  IF+  G   G+ G++ G  +G+  +L +  I +W++ L G
Sbjct: 300 KTRDIAVLRTLGASRGAIMRIFLMCGASVGIVGTVAGSALGIAFALNIERIRQWLQSLTG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
               + ++YF++ LP++L W  V+ V+  +L+LSLLA+ YP+ RA+  DP   L  +
Sbjct: 360 TNLFNPEVYFLERLPAKLVWSQVWEVIGMSLVLSLLATLYPSWRAARTDPIEALRHE 416



>gi|21108306|gb|AAM36938.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|21242820|ref|NP_642402.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 413

 Score =  290 bits (742), Expect = 6e-77
 Identities = 138/415 (33%), Positives = 226/415 (54%), Gaps = 3/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+ + IGLR+ R +RR G +S IS+ S +GIALGV VLI  L+ M+GF++E+ +R+L
Sbjct: 1   MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +  H  + A   P  +WQ A++       +A AAPYI    L++     +   V+GV P
Sbjct: 61  QMAAHATVSAEGAPMRDWQHAVEVAMSDSRVAGAAPYIETESLLQGPRK-QPAIVRGVIP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E ++S L   +Q  +  +   G   I+IGK +A  L V  GD + +++ ++       
Sbjct: 120 AEEGKVSVLAKKMQQGSVDSLTPGSYNIVIGKELALWLGVDVGDSIVVLLSDTQATPLGA 179

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  R  V+GI +    ++D   A++ + D  + L M   V+G+ L++ D+  A  + R
Sbjct: 180 MPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRMDG-VTGVRLRLHDMDQAWPVAR 238

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D     +    +  W      +Y  ++M + +M + + L++ +  FN+VS+ VM V DK 
Sbjct: 239 DLAVRLHGPYRVSDWTQENANLYHSLKMEKTVMGILLSLIVAMGAFNLVSSQVMLVTDKQ 298

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLG     +  +F+  G L G  G+  GVI G+V++L L  I+  IE +   +
Sbjct: 299 ADIAILRTLGLSPAGVMQVFMVQGSLIGFMGTFMGVIGGIVLTLNLERILGVIETIFSVK 358

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L  D+Y+I  LP+++   DV  + V AL++S LA+ YPA RAS   PA  L  +
Sbjct: 359 LLPEDVYYITGLPTDMQTQDVVVITVVALVMSFLATLYPAWRASRTQPAEALRYE 413



>gi|54298182|ref|YP_124551.1|   hypothetical protein lpp2239 [Legionella pneumophila str. Paris]
 gi|53751967|emb|CAH13391.1|   hypothetical protein [Legionella pneumophila str. Paris]
          Length = 415

 Score =  289 bits (741), Expect = 6e-77
 Identities = 150/417 (35%), Positives = 241/417 (57%), Gaps = 5/417 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL+L IGLR++R R++   VS IS+ S +GI +GV VLI  LS MNGF++E++ R  
Sbjct: 1   MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            + P   I   D+  ++W E +  V+ +PGI A APY+   GL+     +  I + G+ P
Sbjct: 61  GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           ++EQ ++ L   +      N K     II+GKG+AD+L V  GD V+IMIP +      M
Sbjct: 121 EKEQSVTHLNKKLLAGNMDNLKH--FGIILGKGLADSLGVMIGDKVTIMIPQATVTPAGM 178

Query: 181 QPKRVRLHVAGILQ--LSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKL 237
            P+  R  V G+         D   A I + DAQ+ + M  + VSGI +K+ +V+ A +L
Sbjct: 179 IPRFKRFTVVGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPEL 238

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
             +  ++      + +W   +G  +  ++M + +M++ ++L+I VA FN+VS+LVM V D
Sbjct: 239 SYELSDLLGEGYQVGNWTQQFGAFFEAVKMEKTMMFMILLLIIAVAAFNLVSSLVMVVND 298

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K  +IA+LRT+GA    I  +F+  G++ GL G++ G++ G+V++   T I+  ++    
Sbjct: 299 KQAEIAILRTIGATPSTILWVFIVQGMMVGLVGTILGLLGGLVLANNATEIVNALQSFFQ 358

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            + LSS IYF+D+LPS++ + D++ V   ALL+S  A+ YPA RAS    A  L  +
Sbjct: 359 VKVLSSSIYFVDYLPSKIMFRDLWQVCAMALLMSFAATIYPAWRASKTVIAEALHYE 415



>gi|52425240|ref|YP_088377.1|   hypothetical protein MS1185 [Mannheimia succiniciproducens MBEL55E]
 gi|52307292|gb|AAU37792.1|   unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 413

 Score =  289 bits (741), Expect = 7e-77
 Identities = 218/414 (52%), Positives = 293/414 (70%), Gaps = 3/414 (0%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M     I  R+ R +++  +VSLI++ S+IGIALGVAVLI+GLSAMNGFERELNNRILAV
Sbjct: 1   MNTPFFISWRYQRTKQKNRLVSLIALFSSIGIALGVAVLILGLSAMNGFERELNNRILAV 60

Query: 63  VPHGEIE-AVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           VPH +I    D    + Q+    +     I A +PY++FT LVE+GA L+ +QV GV+ +
Sbjct: 61  VPHSDITAYQDGRINDRQDLERRLMANSDIKAVSPYVSFTALVENGAKLKVVQVHGVDHK 120

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
               +S+L  FV  + W+ F      +++G G+A  L V +GDWV+++I  +    +L Q
Sbjct: 121 MLDNVSSLGKFVLNNGWQQFAE-RGGLVLGSGIARDLDVSEGDWVTLLISQNTDGDQLSQ 179

Query: 182 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKLVRD 240
           P R R+ V GIL+L GQLDHS+A+IPLA AQ++L    + +SGI +K+ D F   +L   
Sbjct: 180 PARERVQVTGILRLDGQLDHSYALIPLATAQEFLGFAKNEISGIEMKVADPFKVQQLNFA 239

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
                   + +++WI  +GYMYRDIQ+IR +MY+AMVLVIGVACFNIVSTL+MAVKDK+G
Sbjct: 240 NLNDYPQMLNLQTWINKFGYMYRDIQLIRTVMYIAMVLVIGVACFNIVSTLIMAVKDKAG 299

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA++RTLGA +G I+ IF+WYGL AG+ G L G+I+GV++SL LT II+ +E L+GH+ 
Sbjct: 300 DIAIMRTLGANNGFIKRIFIWYGLQAGMKGCLIGIILGVILSLNLTSIIKAVESLLGHKL 359

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           LS  IYF+DFLPSELHW DV  VLV AL+LSLLAS YPA RA+ + PA+VLSG 
Sbjct: 360 LSDGIYFVDFLPSELHWQDVLLVLVAALMLSLLASLYPANRAAKLQPAQVLSGH 413



>gi|52842498|ref|YP_096297.1|   lipoprotein ABC transporter [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629609|gb|AAU28350.1|   lipoprotein ABC transporter [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 451

 Score =  289 bits (739), Expect = 1e-76
 Identities = 150/417 (35%), Positives = 241/417 (57%), Gaps = 5/417 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  PL+L IGLR++R R++   VS IS+ S +GI +GV VLI  LS MNGF++E++ R  
Sbjct: 37  MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 96

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            + P   I   D+  ++W E +  V+ +PGI A APY+   GL+     +  I + G+ P
Sbjct: 97  GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 156

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           ++EQ ++ L   +      N K     II+GKG+AD+L V  GD V+IMIP +      M
Sbjct: 157 EKEQSVTHLNKKLLAGNMSNLKH--FGIILGKGLADSLGVMIGDKVTIMIPQATVTPAGM 214

Query: 181 QPKRVRLHVAGILQ--LSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKL 237
            P+  R  V G+         D   A I + DAQ+ + M  + VSGI +K+ +V+ A +L
Sbjct: 215 IPRFKRFTVVGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPEL 274

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
             +  ++      + +W   +G  +  ++M + +M++ ++L+I VA FN+VS+LVM V D
Sbjct: 275 SYELSDLLGEGYQVGNWTQQFGAFFEAVKMEKTMMFMILLLIIAVAAFNLVSSLVMVVND 334

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K  +IA+LRT+GA    I  +F+  G++ GL G++ G++ G+V++   T I+  ++    
Sbjct: 335 KQAEIAILRTIGATPSTILWVFIVQGMMVGLVGTILGLLGGLVLANNATEIVNALQSFFQ 394

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            + LSS IYF+D+LPS++ + D++ V   ALL+S  A+ YPA RAS    A  L  +
Sbjct: 395 VKVLSSSIYFVDYLPSKIMFRDLWQVCAMALLMSFAATIYPAWRASKTVIAEALHYE 451



>gi|53732302|ref|ZP_00349453.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rickettsia rickettsii]
          Length = 451

 Score =  289 bits (739), Expect = 1e-76
 Identities = 119/414 (28%), Positives = 197/414 (47%), Gaps = 2/414 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                  I  R+ R ++    VS+IS  S +G+ +GVA LIV +S MNGF  EL   I+ 
Sbjct: 39  NNNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIG 98

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +     I        N++E    + K   I       +   L    +N   + VKG+  +
Sbjct: 99  LNGDIVINRQGGSIDNYEEIKAKLLKQDYIKHVTFIAHGQALALGKSNNSGVLVKGMKLK 158

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
                + +   V   ++ NF  G+  I +G+ +A  L V  GD + ++ PNS        
Sbjct: 159 DLSVRNEIFKNVNFGSFDNFH-GKNVIALGEQLASNLGVTVGDKIRLISPNSVSTTFGSM 217

Query: 182 PKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           P+     V  I        D +  ++PL  AQ +L +G+ ++ I +   D   A      
Sbjct: 218 PRSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSHK 277

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
              +    +Y+ +W          + + R  M+  + L+I VA FNI+S+L M VKDK+ 
Sbjct: 278 IQSLLGPTLYVFNWQTLNSQFLSALAVERTAMFTILSLIITVAAFNIISSLFMLVKDKTS 337

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRT+GA    I  IF++ G+  GL G+  GVI+GV  S  +  I  ++E++ G + 
Sbjct: 338 DIAILRTMGASTKQIMLIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLERITGTKI 397

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             + IYF+  LPS++   D+  +   +++L  LA+ YP+ RAS ++P   L  +
Sbjct: 398 FEAAIYFLYSLPSKVRAEDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 451



>gi|48764624|ref|ZP_00269175.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rhodospirillum rubrum]
          Length = 417

 Score =  288 bits (738), Expect = 2e-76
 Identities = 118/416 (28%), Positives = 208/416 (50%), Gaps = 4/416 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                 ++  R+ R RR+ G VS+I+  S  GI LGVA LI+ ++ MNGF  +L  RI  
Sbjct: 3   FNAFERMMAGRYLRARRKEGFVSVIAGFSLAGIGLGVATLIIVMAVMNGFREDLMGRIFG 62

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +  H  +        ++  A D ++ +PG+ A  P +    ++          V+GV P+
Sbjct: 63  LNGHLTVLGQYDVMMDYDRATDIIRGIPGVRAVTPTVEGQVMLTDNGRSVGGLVRGVRPE 122

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
             ++   L + V   +  + + G+  I+IG  +A+   ++ GD ++++ P          
Sbjct: 123 DLRQRPMLANAVIAGSLDDLR-GQDSIMIGNRLAENFGLRVGDKLTLVSPKGKVTAMGTV 181

Query: 182 PKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSS-VSGIALKMTDVFNANKLVR 239
           P+     V  I  +   + D SF  +PL  AQ Y  + +  V+ + + +       ++  
Sbjct: 182 PRVRAYTVRVIFSIGMSEYDSSFVFLPLEAAQTYFQVPTEGVNHLEVVVDHPDRVGEVAG 241

Query: 240 DAGEVTN-SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
                     + ++ W  T    +  +Q+ R +M+L + L+I VA FNI+S L+M VKDK
Sbjct: 242 TIASTNGLGGIRLRDWRQTNATFFNALQVERNVMFLILTLIIVVAAFNIISGLIMLVKDK 301

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             DIA+LRT+GA  G I  IF   G   G+ G+L G+++GV+    +  I + ++ L+G 
Sbjct: 302 GRDIAILRTMGASRGAIMRIFFLAGAAVGVTGTLAGLLLGVLFCQNIEAIRQGLQSLLGV 361

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           +  +++IYF+  +P+ +   +V  V++ AL LS  A+ YPA RA+  DP   L  +
Sbjct: 362 ELFNAEIYFLATMPATMDPHEVMNVVLMALGLSFAATLYPAWRAARTDPVEALRNE 417



>gi|46189140|ref|ZP_00205925.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas syringae pv.
           syringae B728a]
          Length = 386

 Score =  288 bits (738), Expect = 2e-76
 Identities = 146/387 (37%), Positives = 224/387 (57%), Gaps = 4/387 (1%)

Query: 31  TIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPG 90
            IG+ALGV V+IV LS MNGF+ E+  R+L +VPH  IE+ D P T+W+     VQ+ P 
Sbjct: 1   MIGLALGVVVMIVVLSVMNGFDHEMRTRVLGMVPHATIESAD-PITDWRGLAAKVQENPQ 59

Query: 91  IAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIII 150
           + A AP+    GL+     ++ + + G++P +E+++S +  F++     +   G   I+I
Sbjct: 60  VLAVAPFTQMQGLLTHDGKVQKVLLNGIDPLEERKVSIIDHFIKQGQLDSLSPGSFGIMI 119

Query: 151 GKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLA 209
           G   A  L V  GD ++ + P        M P+  R  V GI  +  G++D    +  L 
Sbjct: 120 GDKAAAKLGVGIGDKLTFVAPEVTVTPAGMFPRMKRFEVTGIFHVGAGEIDGFLGLTNLD 179

Query: 210 DAQQYLD-MGSSVSGIALKMTDVFNANKLVRDAGEVTNSY-VYIKSWIGTYGYMYRDIQM 267
           D  +      + V G+ LK  D+F A +   +  +       Y + W  T+G +Y+ I+M
Sbjct: 180 DLGRLHRWKPNQVQGLRLKFDDLFAAPRTSWEIAQKLGENNFYSRDWTRTHGNLYQAIRM 239

Query: 268 IRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAG 327
            +A++ L ++L++ VA FNI+STLVM V DK GDIA+LRTLGA    I AIF+  G + G
Sbjct: 240 EKAMIGLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTLGATPRQIMAIFMVQGTVIG 299

Query: 328 LFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTA 387
           + G+L G  +G++ +L ++  I  +E LIGH+FL++D+YFID+LPS+L   DVF V   A
Sbjct: 300 VVGTLIGAALGILAALNVSAAIAALEGLIGHKFLNADVYFIDYLPSQLMAQDVFQVCGAA 359

Query: 388 LLLSLLASWYPARRASNIDPARVLSGQ 414
           L+LS LA+ YPA RA+   PA  L  +
Sbjct: 360 LVLSFLATLYPAWRAARTQPAEALRYE 386



>gi|48730017|ref|ZP_00263766.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas fluorescens
           PfO-1]
          Length = 386

 Score =  288 bits (738), Expect = 2e-76
 Identities = 138/387 (35%), Positives = 217/387 (56%), Gaps = 4/387 (1%)

Query: 31  TIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPG 90
            IG+ALGV V+IV LS MNGF+ E+  R+L +VPH  IE+  +   +W      V++ P 
Sbjct: 1   MIGLALGVVVMIVVLSVMNGFDHEMRTRVLGMVPHATIES-GEAINDWPSLAAKVKQNPQ 59

Query: 91  IAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIII 150
           +AA AP+    GL+ +   +  + +  ++P  E+ +S + +F++     +   G   I+I
Sbjct: 60  VAAVAPFTQMQGLLTNNGQVSKVLLNAIDPALERNVSIIDNFMKQGKLDDLTPGSFGIVI 119

Query: 151 GKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLA 209
           G   A  L V  GD ++ + P  +     M P+  R  V GI  +  G+LD    +  L 
Sbjct: 120 GDKAATKLGVGIGDKITFVAPEVSVTPAGMFPRMKRFTVVGIFHVGAGELDGYLGVTNLQ 179

Query: 210 DAQQYLD-MGSSVSGIALKMTDVFNANKLVRDAGEVTNSY-VYIKSWIGTYGYMYRDIQM 267
           D  +        V G+ LK  D+F A +   +  +       Y + W  T+G +Y+ I+M
Sbjct: 180 DLAKMHRWKPDQVQGLRLKFDDLFQAPREAWNIAQRLGEDRYYARDWTRTHGNLYQAIRM 239

Query: 268 IRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAG 327
            +A++ L ++L++ VA FNI+STLVM V DK GDIA+LRTLGA  G I   F+  G + G
Sbjct: 240 EKAMIGLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTLGATPGTIMRTFMVQGTVIG 299

Query: 328 LFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTA 387
           + G+  G ++G+  +L ++  I  +E +IGH+FL++D+YFID+LPS++   DV  V   A
Sbjct: 300 VVGTAIGAVVGIFAALNVSAAISALEGVIGHKFLNADVYFIDYLPSQVQSQDVVMVCAAA 359

Query: 388 LLLSLLASWYPARRASNIDPARVLSGQ 414
           L+LS LA+ YPA RA+   PA  L  +
Sbjct: 360 LVLSFLATLYPAWRAARTQPAEALRYE 386



>gi|33592244|ref|NP_879888.1|   lipoprotein releasing system transmembrane protein [Bordetella
           pertussis Tohama I]
 gi|33571889|emb|CAE41405.1|   lipoprotein releasing system transmembrane protein [Bordetella
           pertussis Tohama I]
          Length = 410

 Score =  288 bits (736), Expect = 3e-76
 Identities = 141/407 (34%), Positives = 224/407 (55%), Gaps = 8/407 (1%)

Query: 14  SRGRR--RGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAV 71
            R RR  R   +S I+  S  GIALGVA LIV LS MNGF++E+ +R+L+V+PH E+   
Sbjct: 4   IRQRRGCRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIP 63

Query: 72  D----QPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLS 127
                +    W++     +  P +   AP++   G++  G  LR +QV+G++P  E  +S
Sbjct: 64  GAAPERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVS 123

Query: 128 ALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRL 187
            +P  +      +  AG    ++G  +AD L VK GD V ++ P  +       P+  + 
Sbjct: 124 DIPRQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQF 183

Query: 188 HVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN 246
            V GI      + D +   I   DA +      +  G+ L++ D+  A ++  +  +V  
Sbjct: 184 TVVGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTA-GVRLRVADMQRAPEVAAELTKVLP 242

Query: 247 SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLR 306
            YV    W       +  +Q  + +M+L + L++ VA FN++S+LVMAVKDK  DIA+LR
Sbjct: 243 PYVMAADWSRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILR 302

Query: 307 TLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIY 366
           TLGA  G +  IF+  G L G+ G+L GV  G+ ++  +  I+ +IE+L+G QFL  ++Y
Sbjct: 303 TLGAGPGEVARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVY 362

Query: 367 FIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
           FI  LPS+    D+  + +T+L+LSLLA+ YP+ RAS + PA+VL  
Sbjct: 363 FISALPSDPQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRH 409



>gi|32030059|ref|ZP_00132979.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus somnus 2336]
 gi|23467307|ref|ZP_00122890.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus somnus 129PT]
          Length = 416

 Score =  287 bits (734), Expect = 5e-76
 Identities = 207/416 (49%), Positives = 284/416 (68%), Gaps = 6/416 (1%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M     I  R+   R +  +VSLI++ STIGIALGVAVLIVGLSAMNGFERELN RIL+V
Sbjct: 1   MNTPFFISWRYQYSRSKNKLVSLIALFSTIGIALGVAVLIVGLSAMNGFERELNQRILSV 60

Query: 63  VPHGEIEAVDQ----PWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           VPH EI +  +       + Q+    +Q+ P + A +P++ FT L+E+G  L+  QV+G+
Sbjct: 61  VPHSEIISYQEQGNVKIESRQKITALLQQDPNVLAQSPFVEFTALIENGTKLKVAQVRGI 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
               + ++S L  FV  D W+ F+     +++G G+A  L V + DWV+++I  +N +++
Sbjct: 121 EQVTQDQVSNLSKFVLNDGWQQFQK-NGGLVLGYGIAKELGVSENDWVTLLISFANSDNQ 179

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKL 237
           L QP R R+ V GIL+L GQLDHS+A++ L+ AQ  LD     ++G+ LK+ D F    +
Sbjct: 180 LSQPLRYRIQVTGILRLDGQLDHSYALMSLSQAQVLLDYTPDEITGVELKVQDPFAVRNM 239

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
             +        + ++ WIG +GYMY DIQ+IR +MY+AMVLVIGVACFNIVSTL+MAVKD
Sbjct: 240 TYEYLYDYPQRLQVQDWIGKFGYMYNDIQLIRTVMYIAMVLVIGVACFNIVSTLIMAVKD 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K  DIA++RTLGA +  I+ IFVWYGL +G+ G L G+ +GV++SL LT +I++IE L+ 
Sbjct: 300 KQADIAIMRTLGANNRFIKQIFVWYGLQSGMKGCLVGIALGVILSLNLTDLIQFIEFLLD 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
            + LS  IYFIDFLPSELHW DV  VLV AL+LSLLAS YPA RA+ + PA+VLS 
Sbjct: 360 KKLLSDGIYFIDFLPSELHWQDVLMVLVVALMLSLLASLYPASRAAKLQPAQVLSA 415



>gi|56460622|ref|YP_155903.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Idiomarina loihiensis L2TR]
 gi|56179632|gb|AAV82354.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Idiomarina loihiensis L2TR]
          Length = 411

 Score =  286 bits (732), Expect = 7e-76
 Identities = 174/410 (42%), Positives = 253/410 (61%), Gaps = 2/410 (0%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M L+ LI  RF +G  + G +S IS  STIGIALG AVLI  LS MNGF + L  R+LAV
Sbjct: 1   MQLAWLIARRFRKGTAKQGFLSFISASSTIGIALGCAVLIAALSMMNGFNQVLQERLLAV 60

Query: 63  VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 122
           VP  E  AV+    +WQE  +  ++ P + AAAP IN T +V++ +    IQV+GV+ +Q
Sbjct: 61  VPQVEYSAVEGALEDWQEVAEIARQHPEVIAAAPGINSTVMVQTQSTFHGIQVRGVSAEQ 120

Query: 123 EQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP 182
           EQ +SAL  +V  + W+ +   E  +++G G+AD L +  GD VS++ P  +       P
Sbjct: 121 EQNVSALSDYVSSEDWQRW-QQEGGLLLGAGLADKLNLAVGDSVSLLTPEKSERGF-RSP 178

Query: 183 KRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAG 242
           +RVRL V G+ +  GQ+D+  A + L  A+  L   S VS + L++ DVF+A  + R+ G
Sbjct: 179 ERVRLEVTGLFKFGGQIDYQNAYVSLQTAKNELSFASDVSSVRLRLKDVFSAPAVAREIG 238

Query: 243 EVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDI 302
                 VY+  W  ++G++YRDI+++R ++YL ++LV+ VACFNIVSTL+M V  K   I
Sbjct: 239 NQLPELVYLDDWTRSHGHLYRDIELVRWVVYLVLILVMAVACFNIVSTLIMTVAKKRSQI 298

Query: 303 AVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLS 362
           A+L+TLG KD  +   FV  GL+ GL+G + G   G++++  L  I+  +E     + LS
Sbjct: 299 AMLKTLGMKDKSLLQSFVLQGLMNGLYGVVIGCACGILLAQFLPDIMLTLESWFHFKVLS 358

Query: 363 SDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLS 412
           +DIYF+  +PSE  W DV  V   ALL+SLLA+ YPA RA  ++PAR L 
Sbjct: 359 NDIYFVGEVPSEWAWGDVILVASVALLMSLLATIYPAWRAVKVEPARALH 408



>gi|15892999|ref|NP_360713.1|   hypothetical protein RC1076 [Rickettsia conorii str. Malish 7]
 gi|15620197|gb|AAL03614.1|   unknown [Rickettsia conorii str. Malish 7]
 gi|25321145|pir||D97834   hypothetical protein RC1076 [imported] - Rickettsia conorii
           (strain Malish 7)
          Length = 452

 Score =  285 bits (730), Expect = 2e-75
 Identities = 117/415 (28%), Positives = 197/415 (47%), Gaps = 3/415 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                  I  R+ R ++    VS+IS  S +G+ +GVA LIV +S MNGF  EL   I+ 
Sbjct: 39  NNNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIG 98

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +     I        N++E    + K   +           L    +N   + VKG+  +
Sbjct: 99  LNGDIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAYGQALALGKSNNSGVLVKGMKLK 158

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSN-PEHKLM 180
                + +   V   ++ NF  G+  I +G+ +A  L V  GD + ++ PN++       
Sbjct: 159 DLSVRNEIFKNVNFGSFDNFH-GKNVIALGEQLASNLGVTVGDKIRLISPNNSVSTTFGS 217

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+     V  I        D +  ++PL  AQ +L +G+ ++ I +   D   A     
Sbjct: 218 MPRSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSH 277

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
               +    +Y+ +W          + + R  M+  + L+I VA FNI+S+L M VKDK+
Sbjct: 278 KIQLLLGPTLYVFNWQTLNSQFLSALAVERTAMFTILSLIITVAAFNIISSLFMLVKDKT 337

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA    I  IF++ G+  GL G+  GVI+GV  S  +  I  ++E++ G +
Sbjct: 338 SDIAILRTMGASTKQIMLIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLERITGTK 397

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
              + IYF+  LPS++   D+  +   +++L  LA+ YP+ RAS ++P   L  +
Sbjct: 398 IFEAAIYFLYSLPSKVRAEDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 452



>gi|58581928|ref|YP_200944.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|58426522|gb|AAW75559.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           oryzae pv. oryzae KACC10331]
          Length = 416

 Score =  282 bits (722), Expect = 1e-74
 Identities = 141/415 (33%), Positives = 228/415 (54%), Gaps = 3/415 (0%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+ + IGLR+ R +RR G +S IS+ S +GIALGV VLI  L+ M+GF++E+ +R+L
Sbjct: 4   MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 63

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +  H  + A   P  +WQ A++     P +A AAPYI    L++     +   V+GV P
Sbjct: 64  QMAAHATVSAEGAPMRDWQHAVEVAMSDPRVAGAAPYIETESLLQGPRK-QPAIVRGVIP 122

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E ++S L   +Q  +  +   G   I+IGK +A  L V  GD V +++ ++       
Sbjct: 123 AEEGKVSVLAKKMQQGSVDSLTPGSYNIVIGKELALWLGVDVGDSVVVLLSDTQATPLGA 182

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  R  V+GI +    ++D   A++ + D  + L M   V+G+ L++ D+  A  + R
Sbjct: 183 MPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRMDG-VTGVRLRLHDMDQAWPVAR 241

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D     +    +  W      +Y  ++M + +M + + L++ +  FN+VS+ VM V DK 
Sbjct: 242 DLAVKLHGPYRVSDWTQENANLYHSLKMEKTVMGILLSLIVAMGAFNLVSSQVMLVTDKQ 301

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRTLG   G +  +F+  G L G  G+  GVI G+V++L L  I+  IE +   +
Sbjct: 302 ADIAILRTLGLSPGGVMQVFMVQGSLIGFMGTFMGVIGGIVLTLNLERILGVIEAIFSVK 361

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L  D+Y+I  LP+++   DV  + V AL++S LA+ YPA RAS   PA  L  +
Sbjct: 362 LLPEDVYYITGLPTDMQTQDVVVITVVALVMSFLATLYPAWRASRTQPAEALRYE 416



>gi|33601281|ref|NP_888841.1|   lipoprotein releasing system transmembrane protein [Bordetella
           bronchiseptica RB50]
 gi|33575716|emb|CAE32794.1|   lipoprotein releasing system transmembrane protein [Bordetella
           bronchiseptica RB50]
          Length = 410

 Score =  281 bits (719), Expect = 2e-74
 Identities = 137/397 (34%), Positives = 220/397 (55%), Gaps = 6/397 (1%)

Query: 22  MVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVD----QPWTN 77
            +S I+  S  GIALGVA LIV LS MNGF++E+ +R+L+V+PH E+        +    
Sbjct: 14  FISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQ 73

Query: 78  WQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDA 137
           W++     +  P +   AP++   G++  G  LR +QV+G++P  E  +S +P  +    
Sbjct: 74  WRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIPRQMVSGK 133

Query: 138 WRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLS- 196
             +  AG    ++G  +AD L VK GD V ++ P  +       P+  +  V GI     
Sbjct: 134 LSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGH 193

Query: 197 GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIG 256
            + D +   I   DA +      +  G+ L++ D+  A ++  +  +V   YV    W  
Sbjct: 194 YEYDSTLVFIDDEDAAKVFRESGTA-GVRLRVADMQRAPEVAAELTKVLPPYVMAADWSR 252

Query: 257 TYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIR 316
                +  +Q  + +M+L + L++ VA FN++S+LVMAVKDK  DIA+LRTLGA  G + 
Sbjct: 253 NNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGEVA 312

Query: 317 AIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELH 376
            IF+  G L G+ G+L GV  G+ ++  +  I+ +IE+L+G QFL  ++YFI  LPS+  
Sbjct: 313 RIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSDPQ 372

Query: 377 WLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
             D+  + +T+L+LSLLA+ YP+ RAS + PA+VL  
Sbjct: 373 ADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRH 409



>gi|33596665|ref|NP_884308.1|   lipoprotein releasing system transmembrane protein [Bordetella
           parapertussis 12822]
 gi|33573366|emb|CAE37350.1|   lipoprotein releasing system transmembrane protein [Bordetella
           parapertussis]
          Length = 410

 Score =  281 bits (719), Expect = 3e-74
 Identities = 137/397 (34%), Positives = 220/397 (55%), Gaps = 6/397 (1%)

Query: 22  MVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVD----QPWTN 77
            +S I+  S  GIALGVA LIV LS MNGF++E+ +R+L+V+PH E+        +    
Sbjct: 14  FISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQ 73

Query: 78  WQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDA 137
           W++     +  P +   AP++   G++  G  LR +QV+G++P  E  +S +P  +    
Sbjct: 74  WRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSNIPRQMVSGK 133

Query: 138 WRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLS- 196
             +  AG    ++G  +AD L VK GD V ++ P  +       P+  +  V GI     
Sbjct: 134 LSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGH 193

Query: 197 GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIG 256
            + D +   I   DA +      +  G+ L++ D+  A ++  +  +V   YV    W  
Sbjct: 194 YEYDSTLVFIDDEDAAKVFRESGTA-GVRLRVADMQRAPEVAAELTKVLPPYVMAADWSR 252

Query: 257 TYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIR 316
                +  +Q  + +M+L + L++ VA FN++S+LVMAVKDK  DIA+LRTLGA  G + 
Sbjct: 253 NNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGEVA 312

Query: 317 AIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELH 376
            IF+  G L G+ G+L GV  G+ ++  +  I+ +IE+L+G QFL  ++YFI  LPS+  
Sbjct: 313 RIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSDPQ 372

Query: 377 WLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
             D+  + +T+L+LSLLA+ YP+ RAS + PA+VL  
Sbjct: 373 ADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRH 409



>gi|48862035|ref|ZP_00315933.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Microbulbifer degradans
           2-40]
          Length = 381

 Score =  281 bits (718), Expect = 4e-74
 Identities = 137/380 (36%), Positives = 222/380 (58%), Gaps = 1/380 (0%)

Query: 34  IALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAA 93
           +ALGV  +IV LS MNGF+REL  RIL VVPHG +   ++P T W+   + +Q  P + A
Sbjct: 1   MALGVFAIIVVLSVMNGFDRELKERILRVVPHGFLTT-EKPLTQWRALSEQIQHQPHLLA 59

Query: 94  AAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKG 153
           +APYI+ TGLV  G  +R ++++G++P  E+ +S +  F+   A  + +AGE QI++G  
Sbjct: 60  SAPYIDGTGLVSYGGGVRPVEIQGIDPDYERNISLVDDFMLVGALSDLQAGEYQIVLGNL 119

Query: 154 VADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQ 213
           +A  L +  GD V++ +P  +     + P+  R  + G+ ++  Q+D S A+I + DA++
Sbjct: 120 IARNLGLAIGDTVAVTLPQVSITPAGVFPRSKRFTLIGVFEVGAQVDQSLALIHIDDAKK 179

Query: 214 YLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMY 273
              MG SV+G+ LK  D+++A   +             K W  T G +++ ++M + ++ 
Sbjct: 180 LFRMGDSVAGLHLKYDDIYSAPAEISKLKASLGEGYTTKDWSQTQGSLFQAVKMEKTVVA 239

Query: 274 LAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLC 333
           + + ++I VA FNIV++L+M V +K  DIAVLRTLG     I  IF+  G+  G+ G   
Sbjct: 240 IMLSIIIAVAAFNIVTSLIMMVVEKRSDIAVLRTLGLTRFGIIQIFMVQGITMGVVGIAF 299

Query: 334 GVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLL 393
           G + G+ V++ L  +I  +E   G Q     +YF+ FLPS+    D  +V   A+L+S++
Sbjct: 300 GALFGMGVAIYLPQMIAGLEGATGWQLFDPAVYFVSFLPSQWRAEDTIFVCSMAILMSIV 359

Query: 394 ASWYPARRASNIDPARVLSG 413
           A+ YPA RAS I+PA  L  
Sbjct: 360 ATIYPAWRASKIEPAEALRY 379



>gi|56677757|gb|AAV94423.1|   lipoprotein releasing system transmembrane protein LolE
           [Silicibacter pomeroyi DSS-3]
 gi|56696020|ref|YP_166374.1|   lipoprotein releasing system transmembrane protein LolE
           [Silicibacter pomeroyi DSS-3]
          Length = 447

 Score =  279 bits (715), Expect = 7e-74
 Identities = 107/423 (25%), Positives = 190/423 (44%), Gaps = 12/423 (2%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
             P    I  R+ R RR  G VS+++ IS IGI L V  LI  L+  +GF  +    IL 
Sbjct: 27  FAPFEWKIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSDFVGTILG 86

Query: 62  VVPHGEIEAV---------DQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRA 112
              H  +            D+   N+ E    V +V G+  AAP +    +  +      
Sbjct: 87  ANAHVTVYNPGEYRENGQIDRTIPNYAEMAARVAEVAGVTRAAPLVKGQVMAAAQNRNAG 146

Query: 113 IQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPN 172
           ++V G+       L  + +     ++ +    +Q I +G GVA  L V  GD + ++ PN
Sbjct: 147 VEVFGIATGDLAALPGITN--SDRSYGDLSRFDQGIALGSGVARELGVTVGDRIKLISPN 204

Query: 173 SNPEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDV 231
                    P+     V  +       +D +   +P  +AQ Y +       I + +++ 
Sbjct: 205 GARTPMGTSPRVNAYEVVYVFSAGRYDIDRTRVYMPFGEAQAYFNREGVADEIEVMVSEP 264

Query: 232 FNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTL 291
              ++++            + +W    G   R +++   +M++ + +++ +A  NIVS L
Sbjct: 265 ERLDRVLIPILSAAGDGAQVWTWQDASGGFLRALEVEDNVMFIILSILVLIATMNIVSGL 324

Query: 292 VMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEW 351
           +M VK+K  DI +LRT+G  +G I  +F   G   G+ G+L GV +G + ++ + PI  +
Sbjct: 325 IMLVKNKGRDIGILRTIGLSEGSILRVFFICGAFTGILGTLMGVALGCLFAIYIDPIFSF 384

Query: 352 IEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
           +  ++G       I  I  LP+EL   DV      +L LS + +++PARRA+ ++P   L
Sbjct: 385 VNFVMGGGVWDPAIRGIYALPAELRLGDVLKAAGLSLGLSCIVTYFPARRAARLNPVEAL 444

Query: 412 SGQ 414
             +
Sbjct: 445 RYE 447



>gi|28262692|gb|EAA26196.1|   unknown [Rickettsia sibirica 246]
 gi|34581307|ref|ZP_00142787.1|   hypothetical protein [Rickettsia sibirica 246]
          Length = 424

 Score =  279 bits (714), Expect = 9e-74
 Identities = 117/415 (28%), Positives = 198/415 (47%), Gaps = 3/415 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                  I  R+ R ++    VS+IS  S +G+ +GVA LIV +S MNGF  EL   I+ 
Sbjct: 11  NNNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIG 70

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +     I        N++E    + K   +       +   L    +N   + VKG+  +
Sbjct: 71  LNGDIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAHGQALALGKSNNSGVLVKGMKLK 130

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSN-PEHKLM 180
                + +   V   ++ NF  G+  I +G+ +A  L V  GD + ++ PN++       
Sbjct: 131 DLSVRNEIFKNVNFGSFDNFH-GKNVIALGEQLASNLGVTVGDKIRLISPNNSVSTTFGS 189

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+     V  I        D +  ++PL  AQ +L +G+ ++ I +   D   A     
Sbjct: 190 MPRSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSH 249

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
               +    +Y+ +W          + + R  M+  + L+I VA FNI+S+L M VKDK+
Sbjct: 250 KIQSLLGPTLYVFNWQTLNSQFLSALAVERTAMFTILSLIITVAAFNIISSLFMLVKDKT 309

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DIA+LRT+GA    I  IF++ G+  GL G+  GVI+GV  S  +  I  ++E++ G +
Sbjct: 310 SDIAILRTMGASTKQIMLIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLERITGTK 369

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
              + IYF+  LPS++   D+  +   +++L  LA+ YP+ RAS ++P   L  +
Sbjct: 370 IFEAAIYFLYSLPSKVRAEDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 424



>gi|51473878|ref|YP_067635.1|   hypothetical protein RT0694 [Rickettsia typhi str. Wilmington]
 gi|51460190|gb|AAU04153.1|   conserved hypothetical protein [Rickettsia typhi str. Wilmington]
          Length = 415

 Score =  277 bits (709), Expect = 3e-73
 Identities = 118/414 (28%), Positives = 197/414 (47%), Gaps = 2/414 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
               S  I LR+ R ++    VS+IS  S +G+ +GVA LIV +S MNGF  EL   I+ 
Sbjct: 3   NNNFSFNIALRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHLELTKNIIG 62

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +     I        N++E    + K   I       +   L    +N   + +KG+   
Sbjct: 63  LNGDIIINRQGGNIDNYEEIKTTLLKQNYIKHVTYIAHGQALALGKSNNSGVLIKGIKLN 122

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
                + +   V   ++ NF  G+  I +G+ +A  L V  G+ + ++ PNS        
Sbjct: 123 DLSLRNGIFKNVNFGSFDNFH-GKNVIALGEQLASNLGVTVGEKLRLISPNSVSTAFGSI 181

Query: 182 PKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           P+     +  I        D +  ++PL  AQ +L +G+ ++ I +   D   A +    
Sbjct: 182 PRSKEFEIIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINSIEINSLDPDQAIQYSYK 241

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
              +    +Y+ +W          + + R  M+  + L+I VA FNI+S+L M VKDK+ 
Sbjct: 242 IQSLLGPNLYVFNWQTLNSQFLSALSVERTAMFTILSLIITVAAFNIISSLFMLVKDKTS 301

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRT+GA    I  IF++ G+  GL G+  GVI+GV  S  +  I  ++E + G + 
Sbjct: 302 DIAILRTMGASTKQIMIIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLEHITGTKI 361

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             + IYF+  LPS++   D+  +   +++L  LA+ YP+ RAS + P   L  +
Sbjct: 362 FEAAIYFLYSLPSKVRTDDIILITSLSIILCFLATIYPSYRASKLKPVDALRYE 415



>gi|48849475|ref|ZP_00303718.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 413

 Score =  276 bits (707), Expect = 7e-73
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 4/412 (0%)

Query: 4   PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVV 63
           P    I  R+    R    ++L++ IS + + LGVA L++ +S MNGF  EL ++I+ + 
Sbjct: 5   PFEWTIAKRYMLPGRGEAFIALVAGISLVAVMLGVAALVIVMSVMNGFRAELLDKIVGLN 64

Query: 64  PHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQE 123
            H  I+A      NWQ+ L  VQ+ P +  A+P I    L      + AI V+G   +  
Sbjct: 65  GHAIIQAYGGRLDNWQDILKRVQQTPDVTHASPLIEQPLLASFNGRVEAILVRGNTAED- 123

Query: 124 QRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPK 183
             +  L          + + G   + +G  +A+ L  + GD ++I+ P          P+
Sbjct: 124 --IKRLEDKRVDGVIGSLRPGSGNVALGSRLAENLGARVGDSITIINPQGRSTPFGTVPR 181

Query: 184 RVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAG 242
            +   V+ I ++     D ++ ++P++DAQ  L  G ++  I +  T+       +    
Sbjct: 182 EIAYTVSAIFEVGVYDYDQAYVVMPISDAQTLLLTGDTIGMIEVTTTNADTVMDTLGPLK 241

Query: 243 EVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDI 302
           +       +  W      ++  + + R  M++ + +++ VA FNI+S+L+M V+ K+ DI
Sbjct: 242 KELEGQAVVTDWKTINASLFEALAVERVAMFIVLSIIVLVAVFNILSSLIMLVRAKTRDI 301

Query: 303 AVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLS 362
           A+LRT+GA    +  IFV  G + G  G+L G+ +G V      PI+  I+ L G     
Sbjct: 302 AILRTMGATRKSLLKIFVTIGFVIGALGTLSGLALGFVFLFFRQPIVNAIQYLTGQNLWD 361

Query: 363 SDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             I F+  LPS    +++  + + ALL S LA+ YPA +A++ DP +VL  +
Sbjct: 362 PSIRFLTELPSRSDPVEITTICLMALLFSFLATLYPALKAASTDPVQVLRYE 413



>gi|46580780|ref|YP_011588.1|   lipoprotein releasing system, permease protein [Desulfovibrio
           vulgaris subsp. vulgaris str. Hildenborough]
 gi|46450200|gb|AAS96848.1|   lipoprotein releasing system, permease protein [Desulfovibrio
           vulgaris subsp. vulgaris str. Hildenborough]
          Length = 411

 Score =  276 bits (706), Expect = 8e-73
 Identities = 122/419 (29%), Positives = 212/419 (50%), Gaps = 15/419 (3%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M   L +  R+   RR+   +S+IS +S IG+ LGVA LIV L  MNGF  +L ++IL  
Sbjct: 1   MSFELFVAGRYLFARRKQAFISVISAMSIIGVGLGVASLIVVLGVMNGFTTDLRDKILGA 60

Query: 63  VPHGEIEAVD-QPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
             H  + +       +  E +  VQ V G+  A P+I    ++ +   ++ + ++G++PQ
Sbjct: 61  NAHVIVMSSKPAAMRDVGELMGRVQDVRGVKGATPFIYSETMLSTPHGVKGLVLRGIDPQ 120

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQ---IIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
               + ++ S +     R+  AG      IIIG+ +A+ L +  G  V+++ P+      
Sbjct: 121 TAPGVLSILSRMTRGGLRDLPAGPDGAHGIIIGQELANRLGITTGSRVNLLSPDGQKTTT 180

Query: 179 LMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANK 236
              P+     VAGI      + D S   + L  A+  L +    VSGI + + DV+ A+ 
Sbjct: 181 GFAPRIRPFRVAGIFTTGMYEYDSSLGFVTLDAARDILGLPEGQVSGIEVVVDDVYKADV 240

Query: 237 LVRDAGEVTNS-YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAV 295
           +  D  + +     Y+++W+     ++  +++ +  M++ + L++ V  F+IV+TLVM V
Sbjct: 241 IGEDVLKASGGYPYYVRNWMEMNANLFAALKLEKTAMFVILALIVLVGSFSIVTTLVMLV 300

Query: 296 KDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKL 355
            +K+ DIA+L ++GA   ++R IF+  G + G  G+  G ++G+ VS  L          
Sbjct: 301 MEKTRDIAILMSMGATRSMVRRIFMLQGTIIGAIGTALGYVLGLSVSWALQRY------- 353

Query: 356 IGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                L   +Y ID LP  L W D+  V   A+LL  LA+ YPAR+A+ ++P   L  +
Sbjct: 354 -QFIKLPQGVYSIDHLPVLLQWSDLAAVGGAAMLLCFLATIYPARQAAALEPVEALRYE 411



>gi|54309557|ref|YP_130577.1|   putative ABC transporter integral membrane subunit [Photobacterium
           profundum SS9]
 gi|46913993|emb|CAG20775.1|   putative ABC transporter integral membrane subunit [Photobacterium
           profundum]
          Length = 402

 Score =  275 bits (703), Expect = 2e-72
 Identities = 111/416 (26%), Positives = 210/416 (50%), Gaps = 16/416 (3%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+S  IGLR+ RGR        +S +ST GI +GV  L+  LS MNGFE++L +RIL
Sbjct: 1   MFHPVSFFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVLSLVTVLSVMNGFEQQLKDRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V+P   I   D            +Q++P +    P      +++S ++L A  + G++P
Sbjct: 61  GVLPQAVISQDDGRMPVSDTIPQSLQQLPHVTHVTPITRGEAVLQSASSLAAGNMIGIDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
              +    +   +      N  +G  +++IG+ +A+ L V+ GD + +M+ +++      
Sbjct: 121 SYYE---PIAMDMTVGKLDNLISGSYRVVIGQALANQLGVQVGDKIRLMVTSASQYTPLG 177

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +    + G       +D    +  + DA + L      ++G  L + D F   +L 
Sbjct: 178 RIPSQRNFTIEGFFDTGSDVDKQLILTNIQDAGKLLRYKADQITGWRLFLDDPFAVTELA 237

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +       +      W    G +++ ++M + +M L + L+IGVA FNI+S L+M V +K
Sbjct: 238 Q---VSMPNDWQWSDWREQRGELFQAVKMEKNMMGLMLGLIIGVAAFNIISALIMVVMEK 294

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             ++A+L+T G  +  +  +F+  G  +G+ G++ G ++G++++  L  ++     + G 
Sbjct: 295 QAEVAILKTQGMTNRQVLMVFMVQGASSGVIGAVSGGVLGILLASNLNTVM----SVFGV 350

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           Q+L +       LP  +  L V +V++ A+LLSL+A+ +P+ RA+++ PA  L  +
Sbjct: 351 QYLMAG----GSLPIVIEPLQVMFVILGAILLSLIATIFPSYRAASVRPAEALRYE 402



>gi|52699287|ref|ZP_00340695.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rickettsia akari str.
           Hartford]
          Length = 415

 Score =  275 bits (703), Expect = 2e-72
 Identities = 116/414 (28%), Positives = 197/414 (47%), Gaps = 2/414 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                  I  R+ R ++    VS+IS  S +G+ +GVA LIV +S MNGF  EL   I+ 
Sbjct: 3   NNNFIFNIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIG 62

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +     I        N++E    + K   +       +   L    +N   + VKG+  +
Sbjct: 63  LNGDIVINRQGASIDNYEEIKTKLLKQDYVKHVTFIAHGQALALGKSNNSGVLVKGMKLK 122

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
                + +   V   ++ NF  G+  I +G+ +A  L V  GD + ++ P+S        
Sbjct: 123 DLSLRNEIFKNVNFGSFDNFY-GKNVIALGEQLASNLGVTVGDKIRLISPHSVSTAFGSM 181

Query: 182 PKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           P+     V  I        D +  ++PL  AQ +L +G+ ++ I +   D   A      
Sbjct: 182 PRSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSYK 241

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
              +    +Y+ +W          + + R  M+  + L+I VA FNI+S+L M VKDK+ 
Sbjct: 242 IQSLLGPNLYVFNWQTLNSQFLSALAVERTAMFTILSLIITVAAFNIISSLFMLVKDKTS 301

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRT+GA    I  IF++ G+  GL G+  G+I+GV  S  +  I  ++E++ G + 
Sbjct: 302 DIAILRTMGASTKQIMLIFIYNGMFIGLLGTTLGIILGVTFSYNIQTIKNYLERITGTKI 361

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             + IYF+  LPS++   D+  +   +++L  LA+ YP+ RAS ++P   L  +
Sbjct: 362 FEAAIYFLYSLPSKVRTEDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 415



>gi|15604541|ref|NP_221059.1|   hypothetical protein RP699 [Rickettsia prowazekii str. Madrid E]
 gi|3861235|emb|CAA15135.1|   unknown [Rickettsia prowazekii]
 gi|7449109|pir||E71676   hypothetical protein RP699 - Rickettsia prowazekii
          Length = 415

 Score =  273 bits (698), Expect = 8e-72
 Identities = 116/414 (28%), Positives = 196/414 (47%), Gaps = 2/414 (0%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
               S  I  R+ R ++    VS+I+  S +G+ +GVA LIV +S MNGF  EL   I+ 
Sbjct: 3   NNNFSFNIAFRYFRAKKNEKFVSIIAAFSLVGVMIGVAALIVVMSVMNGFHLELTKNIIG 62

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +     I        N++E    + K   +       +   L    +N   + VKG+   
Sbjct: 63  LNGDIVINRQGDNIDNYEEIKTTLLKQDYVKHVTYIAHGQALALGKSNNSGVLVKGIKLN 122

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
                + +   V   ++ NF  G+  I +G+ +A  L V  G+ + ++ PNS        
Sbjct: 123 DLSLRNGIFKNVNFGSFDNFH-GKNVIALGEQLASNLGVTVGEKLRLISPNSVSTAFGSI 181

Query: 182 PKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
           P+     +  I        D +  ++PL  AQ +L +G+ ++ I +   D   A      
Sbjct: 182 PRSKEFQIIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINSIEINSLDPDQAITYSYK 241

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
              +    +Y+ +W          + + R  M+  + L+I VA FNI+S L M VKDK+ 
Sbjct: 242 IQSLLGPNLYVFNWKTLNSQFLSALAVERTAMFTILSLIITVAAFNIISNLFMLVKDKTS 301

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DIA+LRT+GA    I  IF++ G+  GL G+  GVI+GV  S  +  I  ++E++ G + 
Sbjct: 302 DIAILRTMGASTKQIMVIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLERITGIKI 361

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             + IYF+  LPS++   D+  +   +++L  LA+ YP+ RAS ++P   L  +
Sbjct: 362 FEAAIYFLYSLPSKVKTDDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 415



>gi|61100924|ref|ZP_00376381.1|   ABC-type transport system [Erythrobacter litoralis HTCC2594]
 gi|60736853|gb|EAL75111.1|   ABC-type transport system [Erythrobacter litoralis HTCC2594]
          Length = 415

 Score =  273 bits (697), Expect = 1e-71
 Identities = 118/412 (28%), Positives = 211/412 (51%), Gaps = 4/412 (0%)

Query: 4   PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVV 63
           P    I  R+    R    ++L++ IS   + L VA+L++ +S MNGF  EL ++I+ V 
Sbjct: 7   PFEWTIAKRYLLPGRGEAFIALVAGISVGVVMLSVAMLVIVMSVMNGFRAELLDKIVGVN 66

Query: 64  PHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQE 123
            H  ++A      NW+  L+ V+  PG+  A+P I    LV     + A+ V+G   +  
Sbjct: 67  GHAIVQAYGGRLDNWESILEEVRDTPGVTEASPLIEQPLLVTFNGRVEAVFVRGNTQED- 125

Query: 124 QRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPK 183
             ++ L   V     +  +     + IG  +A+ +  + GD V+I+ P          P+
Sbjct: 126 --IAELSDKVVLGNLQRLQPEASVVAIGARLAENIGARVGDVVTIINPAGRSTPFGTVPR 183

Query: 184 RVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAG 242
           +V   VA I ++     D +F ++P+ DAQ  L  G ++  I +K  D  N  +++    
Sbjct: 184 QVGYEVAAIFEVGLYDYDQAFMVMPIPDAQTLLLTGDTIGMIEVKTEDADNVAEIMAPVE 243

Query: 243 EVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDI 302
              +    +++W      ++  +Q+ R  M+ A+  ++ VA FNI+S+LVM V+ K+ DI
Sbjct: 244 AKLSGIAQVRTWQQINSSIFEALQVERVAMFFALSFMVLVAAFNILSSLVMLVRAKTRDI 303

Query: 303 AVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLS 362
           A++RT+GA    +  IFV  G   G  G+  G+++G +V     PI++ I  + G +   
Sbjct: 304 AIMRTMGATRKSLLKIFVTTGFTVGAIGTFAGLLLGTIVLYFREPIVDVIAFVTGQELWD 363

Query: 363 SDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            ++ F+  LP++   +++  ++V AL+LS LA+ YPA +AS  DP +VL  +
Sbjct: 364 PEVRFLSTLPAKADPVEIIGIVVLALVLSFLATLYPALKASGTDPVQVLRYE 415



>gi|33148230|gb|AAP95750.1|   lipoprotein releasing system transmembrane protein [Haemophilus
           ducreyi 35000HP]
 gi|33152008|ref|NP_873361.1|   lipoprotein releasing system transmembrane protein [Haemophilus
           ducreyi 35000HP]
          Length = 416

 Score =  272 bits (696), Expect = 1e-71
 Identities = 204/416 (49%), Positives = 292/416 (70%), Gaps = 6/416 (1%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M     I  R+ RG+++  ++SLIS+ S+IGIALGVAVLI+GLSAMNGFERELN R+L+V
Sbjct: 1   MNTPFFISWRYQRGKQKNRLISLISLFSSIGIALGVAVLIIGLSAMNGFERELNQRVLSV 60

Query: 63  VPH----GEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           VPH       E  + P    ++  +  ++   + A AP+++FTGL+E+G  L+  QV+G+
Sbjct: 61  VPHAELRVFNEVENSPIYAGEKLAELAKRNQDVIALAPFVSFTGLIENGRQLKIAQVRGI 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
           +  ++ ++S+L  +V    W+ F+     +I+G G+A AL V  GD V++++P ++ E+K
Sbjct: 121 DATKQDQVSSLSQYVASQQWQAFQQQ-GGLILGAGIAKALNVTVGDDVTLLLPQTSGENK 179

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKL 237
           L QP R  L ++GIL+L GQLDHS+A++PLA AQQ LD   +  +GI L +   FNA +L
Sbjct: 180 LAQPLRFNLPISGILRLEGQLDHSYALLPLAKAQQLLDYQPTEYTGIQLALKQPFNAQRL 239

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
                      +Y+ +WI  +GYMY DIQ+IR +MY+AMVLVIGVACFNI+STL+M VKD
Sbjct: 240 QLPELAEFEQPLYLATWIDKFGYMYNDIQLIRTVMYIAMVLVIGVACFNIISTLIMMVKD 299

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K GDIA+LRTLGA    I+ +F+WYGLL+G+ G+L G+++GV++SL+LT II+ +E  +G
Sbjct: 300 KQGDIAILRTLGANSRFIKQVFLWYGLLSGMKGALFGLVLGVLLSLKLTAIIQTLEHFLG 359

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
            + LS  +YFIDFLPSELHW DV  VL   ++LSL+AS YPA RA+ + PA+VLSG
Sbjct: 360 TKLLSDGVYFIDFLPSELHWQDVCCVLFATVILSLVASLYPATRAAKLAPAKVLSG 415



>gi|22959283|ref|ZP_00006937.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rhodobacter sphaeroides
           2.4.1]
          Length = 428

 Score =  271 bits (692), Expect = 4e-71
 Identities = 107/423 (25%), Positives = 186/423 (43%), Gaps = 12/423 (2%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
                 +I  R+ R RR  G VS+++ IS +GI L V  LI  LS   GF  E  + IL 
Sbjct: 8   FAAFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLSVRAGFRAEFVDTILG 67

Query: 62  VVPHGEIEAVDQ---------PWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRA 112
              H  + +  +          + ++      V  VPG+  AAP +    +  +      
Sbjct: 68  ANAHVTVYSAGRITETGQLIRGFEDYDPVAARVAAVPGVLRAAPVVKGQVMATANGASSG 127

Query: 113 IQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPN 172
           ++V G+       +  +   +  +   + +  ++ I +G GVA  L V  GD V ++ P+
Sbjct: 128 VEVFGMRQADLATIPRIG--IGAEHVGDIERFDEGIALGSGVAQELGVSVGDRVRLISPD 185

Query: 173 SNPEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDV 231
                    P+     V  +       +D +   +PLA+AQ Y +       I + + D 
Sbjct: 186 GVKTAFGTSPRVSAYEVVYVFTAGRYDIDRTRVYMPLAEAQSYFNREGLADEIEVMVEDP 245

Query: 232 FNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTL 291
              + +     +       + +W  + G   R + +   +M++ + +++ +A  NIVS L
Sbjct: 246 EAVDAMAPALMQAAGEGSMLWTWRDSAGSFLRALTIEDNVMFVILSILVLIASMNIVSGL 305

Query: 292 VMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEW 351
           +M VK+K  DI +LRT+G  +G I  +F   G   GL G+  GV +G + ++ + PI   
Sbjct: 306 IMLVKNKGRDIGILRTMGLTEGSILRVFFLCGASTGLIGTAAGVALGCLFTIYIDPIFSL 365

Query: 352 IEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
           +  L G       I  I  LP++L W DV   +  +L LS   +  PARRA+ ++P   L
Sbjct: 366 VNYLSGGGVWDPSIRGIYALPAKLQWADVLSAVALSLGLSFFVTLIPARRAARMNPVEAL 425

Query: 412 SGQ 414
             +
Sbjct: 426 RYE 428



>gi|28897751|ref|NP_797356.1|   hypothetical protein VP0977 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28805964|dbj|BAC59240.1|   conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 405

 Score =  269 bits (688), Expect = 9e-71
 Identities = 124/416 (29%), Positives = 205/416 (49%), Gaps = 16/416 (3%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+SL IGLR+ RGR        +S +ST GI +GV  L+  LS MNGFE +L  RIL
Sbjct: 4   MYHPISLFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFEAQLKERIL 63

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V+PH  I   D      + A   +Q +  +A   P +    +++S A L A  + G+ P
Sbjct: 64  GVLPHAVISQHDGRTPLTESAPQFIQAMSDVAEPEPVVRGEAVIQSSAQLTAGYLIGIEP 123

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
           ++      + + +      + +AGE ++ +G  +A +LKV  GD V +M+ N+       
Sbjct: 124 KKGD---PIANHLIAGRLSSLQAGEYKVFLGHSLARSLKVSIGDKVRLMVTNATQFTPLG 180

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +    VAGI      +D    ++ +ADA + + +   +VSG  +  +D F      
Sbjct: 181 RIPSQRNFTVAGIFNTGSDVDGQLMIVNMADAAKLMRLPKDTVSGWRVFFSDPFMVTDFA 240

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
               +          W    G +++ ++M + +M L + L++GVA FNI+S L+M V +K
Sbjct: 241 ---DKPMPEGWQWSDWRAQRGELFQAVKMEKNMMGLMLGLIVGVAAFNIISALIMVVMEK 297

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             ++A+L+T G     +  IF+  G  +G+ G++ G  +GV +SL L  I+E     +  
Sbjct: 298 QSEVAILKTQGMTQSQVMTIFMVQGASSGVIGAIVGGAVGVALSLNLNVILESAGVALFS 357

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                   F   LP  +    +  V+V A+ LSL A+ YP+ RAS++ PA  L  +
Sbjct: 358 --------FGGHLPIVIDSFQILLVVVLAIALSLAATVYPSYRASSVKPAEALRYE 405



>gi|52008723|ref|ZP_00336092.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Silicibacter sp. TM1040]
          Length = 415

 Score =  267 bits (683), Expect = 4e-70
 Identities = 113/417 (27%), Positives = 197/417 (47%), Gaps = 12/417 (2%)

Query: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 67
           +I  R+ R RR  G VS+++ IS IGI L V  LI  L+  +GF  E    IL    H  
Sbjct: 1   MIAWRYLRARRSEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSEFVGTILGANAHAT 60

Query: 68  IEAV---------DQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           + A          D+  T++    + V +VPG+  AAP I    +   G     +QV G+
Sbjct: 61  VYAHGTVTAAGTLDRRITDYAALAEAVGQVPGVLQAAPLIKGQVMASRGDRNAGVQVYGI 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
           + +   ++  +          +    +  I +G GVA  L +  GD V ++ PN      
Sbjct: 121 HAEDLAKIPGVAQSDVAYG--DLGRFDDGIALGSGVARTLGLGIGDKVKLISPNGVKTAF 178

Query: 179 LMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
              P+     V  +       +D++ A +P A+AQ Y +       I + + D    ++ 
Sbjct: 179 GTSPRVNAYEVVYVFTAGRYDIDNTRAYLPFAEAQSYFNREGVADEIEVMVADPEAVDQY 238

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
           V    +       + SW  + G   R +++   +M++ + +++ +A  NIVS L+M VK+
Sbjct: 239 VLPLLQAAGQGYGVWSWRDSSGGFLRALEVEDNVMFVILSILVLIATMNIVSGLIMLVKN 298

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K  DI +LRT+G  +G +  +F   G + G+ G++ GVI+G + ++ + PI  ++  ++G
Sbjct: 299 KGRDIGILRTIGLSEGSVMRVFFICGSITGVIGTVLGVILGCLFAIYIDPIFSFVNYVMG 358

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                  I  I  LP+EL   DV   +  +L LS + + +PARRA+ ++P   L  +
Sbjct: 359 GGVWDPSIRGIYALPAELRAGDVISAVSLSLGLSFVVTIFPARRAARLNPVEALRYE 415



>gi|56542929|gb|AAV89083.1|   ABC-type transport system [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56551355|ref|YP_162194.1|   ABC-type transport system [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 416

 Score =  266 bits (679), Expect = 1e-69
 Identities = 113/411 (27%), Positives = 204/411 (49%), Gaps = 1/411 (0%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
              +I  R+    +    + L++ IS   + LGVA LI+ +S MNGF  EL ++I+ +  
Sbjct: 6   YERIIARRYLLPGKGEAFIFLVASISLFAVTLGVAALIIVMSVMNGFRAELFDKIVGING 65

Query: 65  HGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQ 124
           H  I+  +    NW+  L+  +K PG+ +A P I    +      +  + ++G+      
Sbjct: 66  HAVIQGYNGELANWRPILEATRKTPGVTSAIPLIEQPLMATHAGRVEGVLLRGMALNDVN 125

Query: 125 RLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKR 184
             + + S ++       KAG   +IIG  +A+ L +  GD +S++ P          P+ 
Sbjct: 126 NNNLIRSNIREGHLNELKAGSNNVIIGIRLAEQLGIHAGDDISLISPAGQTTPFGTVPRI 185

Query: 185 VRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGE 243
           V   VA I ++     D +F ++PL+DAQ  L M  +V  I +K  +     +++    +
Sbjct: 186 VSYRVAAIFEVGVYDYDKAFVIMPLSDAQTLLMMNDTVGIIEIKTNNADRVGQILDPLKD 245

Query: 244 VTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIA 303
              +   ++ W      +++ + + R +M+  + L+I VA FNI+S+L+M V+ K+ DIA
Sbjct: 246 RVANVGVLQDWRNMNASLFQALSVERVVMFWILALIILVAAFNILSSLIMLVRAKNRDIA 305

Query: 304 VLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSS 363
           +LRT+GA    +  IF+  GL  G  G+L GVI+  V+     P++  I+   G      
Sbjct: 306 ILRTMGASRIAMLKIFMAVGLAIGSLGTLAGVILAFVILYFRQPLVNAIQYFSGQNLWDP 365

Query: 364 DIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            I  I  LP+ +  ++V  ++  ++  S L + YPA +A++ DP  VL  +
Sbjct: 366 SIRIITELPARVDPIEVIGIIALSIGSSFLFTLYPAWKAASTDPVEVLRYE 416



>gi|46204233|ref|ZP_00050294.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 386

 Score =  264 bits (676), Expect = 2e-69
 Identities = 114/390 (29%), Positives = 206/390 (52%), Gaps = 6/390 (1%)

Query: 25  LISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDH 84
           ++++ S +GIA+GVA LI+ LS MNGF  EL ++I+ +  H     +D+ +T++ +  D 
Sbjct: 1   MVALFSVLGIAVGVATLIIVLSVMNGFRSELRSKIIGLNGHVFAAPIDKLFTDYVDLSDR 60

Query: 85  VQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAG 144
           ++KV G+ A  P +       S      + V+GV      ++ A+ S ++      F  G
Sbjct: 61  LEKVAGVRAVVPMVQGQAFASSPYGGSGVLVRGVRAADLPKIPAVSSAIKSGTLEGFDDG 120

Query: 145 EQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLS-GQLDHSF 203
            Q + +GK +AD+L ++ GD V++  P          P+     V  I ++     D + 
Sbjct: 121 -QGVALGKRLADSLGLQAGDQVTLSTPKGASTPFGTAPRTKAYTVKAIFEIGVTDFDSTM 179

Query: 204 AMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYR 263
           A +PL+++Q + +    VS I + + D     ++           V +  W  T    + 
Sbjct: 180 AFMPLSESQAFFNRDGDVSVIEIYLDDADTVGEMREPLEMAAERPVLLTDWRQTNRTFFG 239

Query: 264 DIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYG 323
            +++ R +M+L + L++ VA  NI+S L++ V+DKS DIA+LRT+GA  G I  +F+  G
Sbjct: 240 ALEVERNVMFLILNLIVIVATLNIISGLILLVRDKSSDIAILRTMGATPGTIMRVFLING 299

Query: 324 LLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYV 383
            L GL G+  G+I GV+ +L + PI   +            + F+  +P+E++  +V  +
Sbjct: 300 ALIGLVGTAIGLIGGVLFTLNIKPIQRTLFP----GAWDPTVRFLAEIPAEMNTSEVVII 355

Query: 384 LVTALLLSLLASWYPARRASNIDPARVLSG 413
           ++T++LLSL+A+ YP+ RA+ +DP + L  
Sbjct: 356 VITSILLSLVATLYPSWRAARLDPVQALRY 385



>gi|57238817|ref|YP_179953.1|   putative lipoprotein releasing system transmembrane protein LolE
           [Ehrlichia ruminantium str. Welgevonden]
 gi|58417372|emb|CAI26576.1|   Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
           ruminantium str. Welgevonden]
 gi|57160896|emb|CAH57801.1|   putative lipoprotein releasing system transmembrane protein LolE
           [Ehrlichia ruminantium str. Welgevonden]
 gi|58578746|ref|YP_196958.1|   Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 411

 Score =  264 bits (676), Expect = 3e-69
 Identities = 123/416 (29%), Positives = 211/416 (50%), Gaps = 7/416 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M     L++ LR+ +  R   + S+I+++S IGI LGVA LI+ +S MNGF  +L N I+
Sbjct: 1   MLFKFELMLALRYLQSNRSQFLCSMITMLSFIGITLGVATLIIVMSVMNGFGEKLLNCIV 60

Query: 61  AVVPHGEIEAVDQPW-TNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVN 119
            V     I   +    TN+ +    ++ +PG+  A P      + +S  ++  I V+G++
Sbjct: 61  GVNGQVAIYFNNNEKDTNYHDVAKLIKDIPGVIDAIPITENQAMAKSEQSVSGIIVRGIS 120

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
            Q   R + +   +      +       I+IG  +A+ L V  GD ++I+  +S P    
Sbjct: 121 KQDLLRKNIIADNIVRGNISDLD---NGIVIGIKLAEILNVNYGDKITILSSDSIPTVIG 177

Query: 180 MQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLV 238
             P+     V  +  L   + D +   +PL  +Q     G+ V  I + + D+  +++++
Sbjct: 178 SIPRMKSYKVIAVFDLGMYEYDSTLVYMPLHSSQLLFHYGNRVHNIEVSIDDINRSSEIL 237

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +   + T   +  + W    G  +  +++   +M+  + L+I VA FNI+S+L + V+DK
Sbjct: 238 KLIEDKT--SMKGEDWKMQQGSYFNALKVESNVMFFILTLIIIVATFNIISSLSILVQDK 295

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G IA++RTLG   G I  IF   G   GL G+L G I+GVV SL +  I   +E +  +
Sbjct: 296 KGAIAIMRTLGVTRGSILRIFCMCGFFIGLIGTLVGCILGVVFSLNINGIKNILESISHN 355

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                 +YF D LPS L   D+  + + +L LSL+A+  PAR+A+  DPA +L  +
Sbjct: 356 NIFDPIVYFFDTLPSILLVKDIVKISLLSLFLSLVAAILPARKAACQDPADILRHE 411



>gi|58416418|emb|CAI27531.1|   Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
           ruminantium str. Gardel]
 gi|58616806|ref|YP_196005.1|   Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
           ruminantium str. Gardel]
          Length = 411

 Score =  264 bits (675), Expect = 3e-69
 Identities = 123/416 (29%), Positives = 212/416 (50%), Gaps = 7/416 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M     L++ LR+ +  R   + S+I+++S IGI LGVA LI+ +S MNGF  +L N I+
Sbjct: 1   MLFKFELMLALRYLQSNRSQFLCSMITMLSFIGITLGVATLIIVMSVMNGFGEKLLNCIV 60

Query: 61  AVVPHGEIEAVDQPW-TNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVN 119
            V     I   +    TN+ +    ++ +PG+  A P      + +S  ++  I V+G++
Sbjct: 61  GVNGQVAIYFNNNEKDTNYHDVAKLIKDIPGVIDAIPITENQAMAKSEQSVSGIIVRGIS 120

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
            Q   R + +   +      +       I+IG  +A+ L V  GD ++I+  +S P    
Sbjct: 121 KQDLLRKNIIADNIVRGNISDLD---NGIVIGIKLAEILNVNYGDKITILSSDSIPTVIG 177

Query: 180 MQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLV 238
             P+     V  +  L   + D +   +PL  +Q +   G+ V  I + + D+  +++++
Sbjct: 178 SIPRMKSYKVIAVFDLGMYEYDSTLVYMPLHSSQLFFHYGNRVHNIEVSIDDINRSSEIL 237

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +   + T   +  + W    G  +  +++   +M+  + L+I VA FNI+S+L + V+DK
Sbjct: 238 KLIEDKT--SMKGEDWKMQQGSYFNALKVESNVMFFILTLIIIVATFNIISSLSILVQDK 295

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G IA++RTLG   G I  IF   G   GL G+L G I+GVV SL +  I   +E +  +
Sbjct: 296 KGAIAIMRTLGVTRGSILRIFCMCGFFIGLIGTLVGCILGVVFSLNINGIKNILESISHN 355

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                 +YF D LPS L   D+  + + +L LSL+A+  PAR+A+  DPA +L  +
Sbjct: 356 NIFDPIVYFFDTLPSILLVKDIVKISLLSLFLSLVAAILPARKAACQDPADILRHE 411



>gi|24373810|ref|NP_717853.1|   lipoprotein releasing system transmembrane protein LolE [Shewanella
           oneidensis MR-1]
 gi|24348205|gb|AAN55297.1|   lipoprotein releasing system transmembrane protein LolE [Shewanella
           oneidensis MR-1]
          Length = 410

 Score =  264 bits (675), Expect = 4e-69
 Identities = 127/419 (30%), Positives = 218/419 (52%), Gaps = 14/419 (3%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M +   L +G R+ R R+     S I++ +  GI LGVA LIV  S MNG E +L  RIL
Sbjct: 1   MDLRFPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
             VP   +     P ++W  A + +  +PG+    P ++   +V+S AN+RA+QV GV P
Sbjct: 61  GAVPQLTVYT-KAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE-HKL 179
           +  ++LSA+       A+    +G+ Q+I+G  +A  LKV  GD V ++  +        
Sbjct: 120 ELAEKLSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLG 179

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P + +  V+ + ++  Q+D   A +   DA++ +      ++ + L + D F A  L 
Sbjct: 180 PVPSQRKFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALA 239

Query: 239 RDAGEVTNSY---VYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAV 295
           +D  ++  +         W  TYG+++  ++M + +M L + L++ VA FNIVS LVM V
Sbjct: 240 KDVQQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMV 299

Query: 296 KDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKL 355
            DK+ D+AVL+T G +   +  IFV  GLL  + G   G+++G++++L L  ++  +   
Sbjct: 300 VDKTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATLGIS 359

Query: 356 IGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           I              LP +L    +  ++V  L+++L+A+ YPA RA+ + PA  L  +
Sbjct: 360 ILGAG--------QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410



>gi|40063595|gb|AAR38384.1|   ABC transporter, permease protein [uncultured bacterium 582]
          Length = 415

 Score =  261 bits (668), Expect = 2e-68
 Identities = 106/417 (25%), Positives = 185/417 (44%), Gaps = 12/417 (2%)

Query: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 67
           +I  R+ R +R  G VS+++ IS IGI L V  LI  LS  +GF  E  + IL    H  
Sbjct: 1   MIAWRYLRSKRAEGGVSVMTWISLIGITLAVFALIATLSVRSGFRAEFVDTILGANAHAT 60

Query: 68  IEA---------VDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           +           +D+  + +      +++VPG++  AP I    +         ++V G+
Sbjct: 61  VYQGATVNENGQMDRSISEYDTIAARLRQVPGVSRVAPLIKGQVMATRLGRNAGVEVFGI 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
           + +    L  +          +    +  + IG GVA  L V  GD + +M P+      
Sbjct: 121 SFENLLTLPRIARPESYAG--DINRFQSGVAIGSGVARELGVIVGDKIKLMSPDGVKTAF 178

Query: 179 LMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
              P+     V  I       +D +   +P A AQ + +   +     + + D    + L
Sbjct: 179 GTSPRIKSYVVGYIFTAGRYDIDRTRIYMPFAAAQSFFNSEGTADEFEVMVADPEAVDVL 238

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
           +            + +W        + + +   +M++ M +++ +A  NIVS L+M VK+
Sbjct: 239 LPALQAAAGDNALVWTWRQASSSFLKALTIEDNVMFIIMSILVLIAAMNIVSGLIMLVKN 298

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K  DI +LRT+G  +G +  IF   G   GL G+LCGV++GV  +L +  I   +  L G
Sbjct: 299 KGRDIGILRTMGLSEGSVMRIFFICGASTGLLGTLCGVLLGVAFTLYIDTIFSAVNYLAG 358

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                  I  +  +P++L   DV   +  +L LS + + +PARRA+ ++P   L  +
Sbjct: 359 GGVWDPSIRGLYNVPAKLQLGDVITAIGLSLSLSFVVTIFPARRAARLNPVEALRYE 415



>gi|48862033|ref|ZP_00315931.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Microbulbifer degradans
           2-40]
          Length = 412

 Score =  260 bits (664), Expect = 7e-68
 Identities = 147/415 (35%), Positives = 231/415 (55%), Gaps = 4/415 (0%)

Query: 1   MAMPLSLLIGLRFSRG-RRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRI 59
           M   L ++IGLR++   R++  ++S +S IS  G+ +GV +LI  LS MNGF+REL   I
Sbjct: 1   MLNLLPIVIGLRYTGAKRKKSQLISFLSGISIAGLVVGVGLLITVLSVMNGFDRELRENI 60

Query: 60  LAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVN 119
           L +VP   I   +     WQ  +D +     I AAAPY+   GLV  G     + + GV 
Sbjct: 61  LGLVPQAVINHQEG-IAEWQPLVDELTADKDILAAAPYVQTYGLVALGKQAEPVVLYGVE 119

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
           P+ E R+S +  F+  D   + + GE  I++GK +A  L V  G+ V +++P ++     
Sbjct: 120 PEYEVRVSRITDFIAADVLASIEQGEPSILLGKDLAATLNVSVGNKVMMVVPGAD--GGR 177

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
             PK     V G++    +LD + A+  L  +       ++V+G+ LK+ ++F+A  +V 
Sbjct: 178 AAPKTGYFKVVGLVDSKTELDATLAITSLTHSLPLTSHPNAVTGVRLKLNNLFDAPYVVY 237

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
                        +W  T+G +Y  I+M ++++ L M LV+ +A FN+VSTLV+ V DK 
Sbjct: 238 RHLLELGPGYSGNNWTRTHGNLYHAIKMSKSLVGLLMSLVVAIAAFNVVSTLVLVVVDKQ 297

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
           GDIA+LRTLG     I AIF+  G   GL G+  G+ +G V+SL +  ++  IE + G Q
Sbjct: 298 GDIAILRTLGISTKQIMAIFITQGTAIGLIGTSLGLAVGCVLSLLVQNLVRIIEAVFGVQ 357

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           FL SD+Y + +LPSE+   D+  V +TA ++  LA+ YPA +AS + PA  L  +
Sbjct: 358 FLKSDVYPLTYLPSEILLQDILAVGITAFVMCFLATLYPAWKASRVQPADALRYE 412



>gi|59713645|ref|YP_206420.1|   lipoprotein releasing system transmembrane protein LolE [Vibrio
           fischeri ES114]
 gi|59481893|gb|AAW87532.1|   lipoprotein releasing system transmembrane protein LolE [Vibrio
           fischeri ES114]
          Length = 402

 Score =  259 bits (662), Expect = 1e-67
 Identities = 116/416 (27%), Positives = 200/416 (48%), Gaps = 16/416 (3%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+S+ IGLR+ RGR        IS +ST GI +GV  L+  LS MNGFE +L +RIL
Sbjct: 1   MFHPVSVFIGLRYLRGRSGDRFSRFISYMSTAGITIGVLSLVTVLSVMNGFEGQLKDRIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V+P   I + D   T   +  ++V  +P +    P +    +++S   L A  + G+ P
Sbjct: 61  GVLPQAVISSTDNQITPLDDEREYVASLPHVTQVTPVVRGEAIIQSARGLSAGMLVGIEP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
            +      +   +     R   AGE  I +G  +A  L V+ GD V IM+ N++      
Sbjct: 121 NEYD---PIAYELISGNVRQLAAGEYGIFLGSKLARELSVRYGDTVRIMVTNASQYTPLG 177

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLV 238
             P +    V G+      +D    +  + D  + +     +++G  L   D F   +L 
Sbjct: 178 RIPSQRNFKVVGVFNTGSDVDGQLMVANIQDTARLMKLKKGNITGWRLFFEDPFQVTELA 237

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +   E          W    G +++ ++M + +M L + L++ +A FNI+S L+M V +K
Sbjct: 238 KMPLEHEM---TWSDWRDQRGELFQAVKMEKNMMGLMLGLIVAIAAFNIISALIMVVMEK 294

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             ++A+L+T G     +  IF+  G  +G+ G++ G  +G + +  +  I+  +   +  
Sbjct: 295 QAEVAILKTQGMTSNQVLVIFMVQGASSGVIGAIVGGTLGALFASNINVILSTLGLSLFT 354

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
              S        LP+E+  L V  V++ A+LLSLLA+ +P+ RA+ + PA  L  +
Sbjct: 355 VGGS--------LPAEVEPLQVCVVIILAILLSLLATVFPSYRAAVVQPAEALRYE 402



>gi|4062688|dbj|BAA35936.1|   Hypothetical protein HI1555 [Escherichia coli K12]
          Length = 416

 Score =  256 bits (653), Expect = 1e-66
 Identities = 110/416 (26%), Positives = 209/416 (50%), Gaps = 19/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 18  MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 77

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   + +      N Q+  +   K+ G+   AP      +++S  ++    + G++P
Sbjct: 78  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 136

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
            Q+  L+     V+     + + G+  +I+G+ +A  L V +GD + +M+P+++      
Sbjct: 137 AQKDPLTPYLVNVKQ---TDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 193

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +   +V G    + ++D    ++ + DA + +     +++G  L + +    + L 
Sbjct: 194 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 253

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +            + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 254 QQ---KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 310

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     I  +F+  G  AG+ G++ G  +G +++ QL  ++  I  L+  
Sbjct: 311 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDG 370

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L  +
Sbjct: 371 A----------ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 416



>gi|37680547|ref|NP_935156.1|   putative ABC transporter integral membrane subunit [Vibrio
           vulnificus YJ016]
 gi|37199295|dbj|BAC95127.1|   putative ABC transporter integral membrane subunit [Vibrio
           vulnificus YJ016]
          Length = 401

 Score =  256 bits (653), Expect = 1e-66
 Identities = 119/416 (28%), Positives = 200/416 (48%), Gaps = 17/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+S+ IGLR+ RGR        +S +ST GI +GV  L+  LS MNGFE +L  RIL
Sbjct: 1   MFHPVSIFIGLRYLRGRSGDRFSRFVSYMSTAGITVGVMSLVTVLSVMNGFEAQLKERIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V+P   + ++D   T      + V+ +       P +    +++S + L    + G+ P
Sbjct: 61  GVLPQA-VVSMDGGKTPHTTPPEFVRALSPHYKPTPLVRSEAVIQSPSQLSVGYLIGIEP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
             +     + + +        +AG+ Q+ +G  +A +L V  GD V +M+ +++      
Sbjct: 120 SADD---PIENHLIAGRLSQLEAGKYQVFLGHSLARSLNVSMGDKVRLMVTSASQFTPLG 176

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSS-VSGIALKMTDVFNANKLV 238
             P +    VAG+      +D    +  + DA + + + S  +SG  L   D F   +  
Sbjct: 177 RIPSQRNFTVAGMFNTGSDIDGQLMVTHIEDAGRLVRLPSKTISGWRLYFDDPFQVTEAA 236

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
                          W    G +++ ++M + +M L + L++ VA FNI+S L+M V +K
Sbjct: 237 ---NTPLPDGWQWSDWRAQRGELFQAVKMEKNMMGLMLGLIVAVAAFNIISALIMVVMEK 293

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             ++A+L+T G     I AIF+  G  +G+ GSL G  +GV++S  L  I+E     +  
Sbjct: 294 QSEVAILKTQGMNSFGIMAIFMVQGASSGIIGSLFGGAVGVLLSQNLNTILETAGVALFT 353

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                   F   LP  +    +  V+V A+LLSLLA+ YP+ RAS++ PA  L  +
Sbjct: 354 --------FGGSLPVLIQPFQIVAVVVLAVLLSLLATLYPSYRASSVKPAEALRYE 401



>gi|51245480|ref|YP_065364.1|   similar to lipoprotein releasing system transmembrane protein
           (LolC) [Desulfotalea psychrophila LSv54]
 gi|50876517|emb|CAG36357.1|   related to lipoprotein releasing system transmembrane protein
           (LolC) [Desulfotalea psychrophila LSv54]
          Length = 410

 Score =  254 bits (648), Expect = 5e-66
 Identities = 111/415 (26%), Positives = 199/415 (47%), Gaps = 15/415 (3%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
               I LR+ R + +   +SLIS+IS  GI +GV  LIV ++  +GF   L ++IL V  
Sbjct: 4   YEWFISLRYLRAKHKQRFISLISLISIAGITVGVIALIVVMAVYSGFTTSLRDQILGVNA 63

Query: 65  HGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNPQQE 123
           H  ++       ++      +  +P +  A PY+    L+ S       + ++G++P   
Sbjct: 64  HIIVQQQGGKMYDYLNVRKEIIALPNVRGATPYLYAQTLLSSPRGGGSGVVLRGIDPTTA 123

Query: 124 QRLSALPSFVQGDAWRNFKAGE---QQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             +  LP  +      N          IIIGK +A  L+V QGD V ++ P+       +
Sbjct: 124 VGVLGLPEQMIAGKVDNLTDKTTRVPNIIIGKNLAKNLRVGQGDKVRLISPSGPLTPMGV 183

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDV--FNANKL 237
            PK     V+GI +    + D + A + +A+ Q +L  G    GI + +      +A+++
Sbjct: 184 IPKITTCQVSGIFETGMYEYDSTLAYMSIANTQNFLASGDLAHGIEVTVDHNKLDSADQI 243

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
                +   S   ++ W+     ++   ++ +  M++ M L+I VA  NIVS L+M V +
Sbjct: 244 AATIRKSLGSLYVVRDWMQMNQNLFAAFKLEKIGMFICMALIILVAALNIVSALIMVVME 303

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K+ DIA+L+++GA    I  IF + GL+    G+  GV  G+ +   L+           
Sbjct: 304 KTKDIAILKSMGATSSSIMRIFFFQGLVIAFLGTGLGVAGGLGLCQLLSRYK-------- 355

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLS 412
              L +++Y +  LP ++   DV  V   +++++LLA+ YP+ +A+ + P  VLS
Sbjct: 356 FIELPANVYPMTTLPIQVIPSDVIIVAACSIIITLLATLYPSWKAAQVRPGEVLS 410



>gi|26247260|ref|NP_753300.1|   Lipoprotein releasing system transmembrane protein lolC
           [Escherichia coli CFT073]
 gi|26107661|gb|AAN79860.1|   Lipoprotein releasing system transmembrane protein lolC
           [Escherichia coli CFT073]
 gi|16129079|ref|NP_415634.1|   transport protein of outer membrane lipoproteins (ABC superfamily,
           membrane) [Escherichia coli K12]
 gi|1787360|gb|AAC74200.1|   orf, hypothetical protein; transport protein of outer membrane
           lipoproteins (ABC superfamily, membrane) [Escherichia
           coli K12]
 gi|12514666|gb|AAG55862.1|   orf, hypothetical protein [Escherichia coli O157:H7 EDL933]
 gi|13360958|dbj|BAB34917.1|   hypothetical protein [Escherichia coli O157:H7]
 gi|25321150|pir||F90815   Lipoprotein releasing system transmembrane protein ECs1494 -
           Escherichia coli (strain O157:H7, substrain RIMD
           0509952)
 gi|7449107|pir||A64856   Lipoprotein releasing system transmembrane protein ycfU -
           Escherichia coli (strain K-12)
 gi|25321151|pir||B85675   Lipoprotein releasing system transmembrane protein ycfU -
           Escherichia coli (strain O157:H7, substrain EDL933)
 gi|15830748|ref|NP_309521.1|   hypothetical protein ECs1494 [Escherichia coli O157:H7]
 gi|2829636|sp|P75956|LOLC_ECOLI   Lipoprotein releasing system transmembrane protein lolC
 gi|15801233|ref|NP_287250.1|   hypothetical protein Z1757 [Escherichia coli O157:H7 EDL933]
          Length = 399

 Score =  253 bits (646), Expect = 7e-66
 Identities = 110/416 (26%), Positives = 209/416 (50%), Gaps = 19/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   + +      N Q+  +   K+ G+   AP      +++S  ++    + G++P
Sbjct: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
            Q+  L+     V+     + + G+  +I+G+ +A  L V +GD + +M+P+++      
Sbjct: 120 AQKDPLTPYLVNVKQ---TDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +   +V G    + ++D    ++ + DA + +     +++G  L + +    + L 
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +            + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 237 QQ---KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     I  +F+  G  AG+ G++ G  +G +++ QL  ++  I  L+  
Sbjct: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDG 353

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L  +
Sbjct: 354 A----------ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399



>gi|42521026|ref|NP_966941.1|   hypothetical protein WD1229 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410767|gb|AAS14875.1|   conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 409

 Score =  252 bits (645), Expect = 1e-65
 Identities = 125/415 (30%), Positives = 205/415 (49%), Gaps = 7/415 (1%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M++   + +   + R R      S++++ S IGIALGVA LIV +S MNGF  +L + IL
Sbjct: 1   MSIAFEITMAACYLRAR-NARFCSIMTLFSIIGIALGVATLIVVMSVMNGFRAKLLDSIL 59

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +  H  +       +++      ++++PGI  A P  N   ++ +   +    V+GV+ 
Sbjct: 60  GIDGHINVYFDRNINSDYYAVSKSIERIPGILKATPMTNDQVIIVANGKIAGSVVRGVST 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +     +A+ + V     + F  G   IIIG  +A+ L +  GD ++ +           
Sbjct: 120 KDLLDSTAVTNNVIIGDVKKFNEG---IIIGARLAEVLNIDYGDEITFISSEEFDALLGE 176

Query: 181 QPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            P+  +  V  I  +   + D++   +PL  AQ +    +S+  I + + DV  A+KL  
Sbjct: 177 MPRMKKYKVIAIFDMGMFEYDNTLIYMPLKSAQAFFSYKNSIKNIEVLVDDVTRADKLAD 236

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
              +     +  +SW     + +  ++  R +M+L + L+I VA FNI+S L+M V++K 
Sbjct: 237 AIEKEI--GMEAESWQSQQSHYFSALKTERNVMFLILTLIIVVAAFNIISNLMMIVQEKK 294

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
             IA++RT GA  G I  IF   GLL G  G+  G IIGVV SL +  I  ++E +   +
Sbjct: 295 SAIAIMRTFGATSGSIMRIFCACGLLIGFTGTCLGCIIGVVFSLNIESIRVFLENITNVK 354

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                IYF   LP  L   DV  +   ALLLS LA+  PA +A+  DPA +L  +
Sbjct: 355 LFDPMIYFFSSLPVILVPQDVVNISALALLLSFLATIAPALQAAAQDPAEILRYE 409



>gi|56460624|ref|YP_155905.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Idiomarina loihiensis L2TR]
 gi|56179634|gb|AAV82356.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Idiomarina loihiensis L2TR]
          Length = 409

 Score =  252 bits (643), Expect = 2e-65
 Identities = 123/417 (29%), Positives = 209/417 (50%), Gaps = 13/417 (3%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+ L IGLR+SR R+     + I+  +  GIALGV  L+V +S MNGFE +L  RIL
Sbjct: 1   MFQPVVLFIGLRYSRARQGSAFTAFINRFAFAGIALGVMALVVVMSVMNGFEGQLKERIL 60

Query: 61  AVVPHGEIEAVDQP--WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
             VP   +   D     TNW++  + + ++  I  + PY+   G+++    +    ++G+
Sbjct: 61  GAVPQVTLTDADSTTELTNWRKTQEQLPELEAIKGSMPYVQTQGILQFSEKMSVANIQGI 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EH 177
            P   +   +L   +    W +   G   +IIG+ +A    +  GD + I+         
Sbjct: 121 YPDAGEVPLSLEDKMVVGDWLSLTPGSYHLIIGQRLAQKQGITVGDNIRIIAAQGGVYTP 180

Query: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANK 236
             + P + R  V G   +  ++D S      +D  + + +    VSG+ L + D F A +
Sbjct: 181 FGLVPSQRRFVVTGFFSMGSEVDESVVFAHGSDLARLIRLPEGKVSGLQLFLDDAFKAPQ 240

Query: 237 LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVK 296
           +         + +    W   YG ++  + M + +M+L + L+I VA FN +S L+M + 
Sbjct: 241 VAESL--RNKTQLTTSDWRQNYGQLFEAVGMEKRMMWLMLALIIAVAAFNTLSALIMVIN 298

Query: 297 DKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI 356
           DK  DIA+L+TLG  +G IR +F+  GL  G+ GSL GVI+G+++S  L  I+     L 
Sbjct: 299 DKRHDIAILQTLGLSNGRIRTVFLLQGLYNGVLGSLIGVILGLILSWYLNDILA----LF 354

Query: 357 GHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
           G Q  +      + LP  ++   V   +V A+ L+L+A+ YPA +A+++ P+  L  
Sbjct: 355 GAQIFAGSD---EGLPIIINVSQVIITVVAAITLTLVATLYPASQAAHVQPSEALRY 408



>gi|56479828|ref|NP_707031.2|   hypothetical protein SF1120 [Shigella flexneri 2a str. 301]
 gi|56383379|gb|AAN42738.2|   orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30062649|ref|NP_836820.1|   hypothetical protein S1200 [Shigella flexneri 2a str. 2457T]
 gi|30040897|gb|AAP16627.1|   hypothetical protein S1200 [Shigella flexneri 2a str. 2457T]
          Length = 399

 Score =  251 bits (640), Expect = 4e-65
 Identities = 110/416 (26%), Positives = 210/416 (50%), Gaps = 19/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MYQPVALFIGLRYMRGRAVDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   + +      N Q+  +   K+ G+   AP      +++S  ++    + G++P
Sbjct: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
            Q+  L+     V+     + + G+  +I+G+ +A  L V +GD + +M+P+++      
Sbjct: 120 AQKDPLTPYLVNVKQ---TDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGS-SVSGIALKMTDVFNANKLV 238
             P +   +V G    + ++D    ++ + DA + +   + +++G  L + +    + L 
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAANITGWRLWLDEPLRVDSLS 236

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +            + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 237 QQ---KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     I  +F+  G  AG+ G++ G  +G +++ QL  ++  I  L+  
Sbjct: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDG 353

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L  +
Sbjct: 354 A----------ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399



>gi|9656415|gb|AAF95032.1|   conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
           str. N16961]
 gi|15641886|ref|NP_231518.1|   hypothetical protein VC1884 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|11279731|pir||B82147   conserved hypothetical protein VC1884 [imported] - Vibrio cholerae
           (strain N16961 serogroup O1)
          Length = 406

 Score =  250 bits (639), Expect = 4e-65
 Identities = 124/416 (29%), Positives = 203/416 (48%), Gaps = 16/416 (3%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+S  IGLR+ RGR        +S +ST GI +GV  L+  LS MNGFE +L +RIL
Sbjct: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V+P   +       T      D V  +       P +    +V+S + L A  + G+ P
Sbjct: 65  GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEP 124

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
           QQ      +   +        +AGE Q+ +G  +A +L V  GD V +M+  ++      
Sbjct: 125 QQND---PIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSS-VSGIALKMTDVFNANKLV 238
             P +    VAGI      +D    +  L DA + L   +  +SG  L   D F  ++L 
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
               +          W    G +++ ++M + +M L + L++GVA FNI+S L+M V +K
Sbjct: 242 ---EQPLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEK 298

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             ++A+L+T G +   + AIF+  G  +G+ G+L G ++GV+++  L  ++E +   +  
Sbjct: 299 QAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGVALFS 358

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
              S        LP  +  L +  V+V A++LSLLA+ +PA RAS++ PA  L  +
Sbjct: 359 VGGS--------LPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406



>gi|56413797|ref|YP_150872.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
 gi|56128054|gb|AAV77560.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
          Length = 436

 Score =  250 bits (638), Expect = 6e-65
 Identities = 109/416 (26%), Positives = 203/416 (48%), Gaps = 19/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 38  MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 97

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   + A        Q   +    + G+   AP      +++S  ++    + G++P
Sbjct: 98  GLMPQAILSAEHGSLNPSQ-MPEKAVNLQGVNRIAPLTTGDVVLQSARSVAVGVMLGIDP 156

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
            Q+  L+     V+       + G+  +I+G+ +A  L V +GD + +M+P+++      
Sbjct: 157 AQKDPLTPYLVNVKQ---SELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 213

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +    V G    + ++D    ++ + DA + +     +++G  L + +    + L 
Sbjct: 214 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 273

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +            + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 274 QQ---TLPQGTKWQDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 330

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     I  +F+  G  AG+ G+L G  +G +++ QL  ++  I   +  
Sbjct: 331 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGALLGAALGALLASQLNNLMPIIGAFLDG 390

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L  +
Sbjct: 391 A----------ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 436



>gi|29142137|ref|NP_805479.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 gi|16760092|ref|NP_455709.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|62127370|gb|AAX65073.1|   ABC transporter, integral membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|16419735|gb|AAL20146.1|   integral membrane protein ABC transporter [Salmonella typhimurium
           LT2]
 gi|29137766|gb|AAO69328.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 gi|16502386|emb|CAD08341.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|25321153|pir||AB0645   ABC transporter integral membrane chain STY1257 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
          Length = 436

 Score =  250 bits (638), Expect = 6e-65
 Identities = 109/416 (26%), Positives = 203/416 (48%), Gaps = 19/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 38  MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 97

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   + A        Q   +    + G+   AP      +++S  ++    + G++P
Sbjct: 98  GLMPQAILSAEHGSLNPNQ-MPEKAVNLQGVNRIAPLTTGDVVLQSARSVAVGVMLGIDP 156

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
            Q+  L+     V+       + G+  +I+G+ +A  L V +GD + +M+P+++      
Sbjct: 157 AQKDPLTPYLVNVKQ---SELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 213

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +    V G    + ++D    ++ + DA + +     +++G  L + +    + L 
Sbjct: 214 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 273

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +            + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 274 QQ---TLPQGTKWQDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 330

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     I  +F+  G  AG+ G+L G  +G +++ QL  ++  I   +  
Sbjct: 331 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGALLGAALGALLASQLNNLMPIIGAFLDG 390

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L  +
Sbjct: 391 A----------ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 436



>gi|46308991|ref|ZP_00211183.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Ehrlichia canis str. Jake]
          Length = 403

 Score =  249 bits (637), Expect = 9e-65
 Identities = 116/408 (28%), Positives = 208/408 (50%), Gaps = 6/408 (1%)

Query: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 67
           ++ LR+ +      + S+I+++S +GI LGVA LI+ +S MNGF  +L + ++ +  H  
Sbjct: 1   MLALRYLQSSSSQFLCSMITILSLVGITLGVATLIIVMSVMNGFGEKLLDCVVGLNGHIA 60

Query: 68  IEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLS 127
           I        ++ E    ++++PG+  A P      +++S +++  + V+G+  Q  +R +
Sbjct: 61  IYCDGNFDYDYHEITKSIKEIPGVKYAVPITENQAMIKSSSSVSGVIVRGIEKQDIERNN 120

Query: 128 ALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRL 187
            + + +       F  G   I IG  +A+ L+V  GD ++I+   S        P+    
Sbjct: 121 IIVNNIVRGDIAEFNDG---IAIGIKLAEVLRVDYGDKLTIISSESLSTVIGNIPRMKTY 177

Query: 188 HVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN 246
            V  I  +   + D S   +PL  +Q +    + V  I + + D   ++++++       
Sbjct: 178 KVVAIFDVGMYEFDSSLVYMPLHASQLFFHYDNRVKNIEVSIFDGNKSSEMLKLIENKI- 236

Query: 247 SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLR 306
             +  + W    G  +  +++ R +M+  + L+I VA FNI+S+L + V+DK G IA++R
Sbjct: 237 -DMKGEDWKMQQGSYFHALEIERNVMFFILTLIIIVATFNIISSLSILVQDKKGAIAIMR 295

Query: 307 TLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIY 366
           TLG     I  IF   G+  GL G++ G +IG+V SL +  I   +EK+         IY
Sbjct: 296 TLGVTRCGILRIFCMCGVFIGLIGTVLGCVIGIVFSLNINAIKNILEKISNSNIFDPIIY 355

Query: 367 FIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           F D LPS L   DV  + + +L LSL+A+  PAR+A+  DPA +L  +
Sbjct: 356 FFDTLPSVLLVEDVVKISLLSLFLSLIAAILPARKAACQDPADILRHE 403



>gi|58584740|ref|YP_198313.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58419056|gb|AAW71071.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 385

 Score =  249 bits (636), Expect = 1e-64
 Identities = 119/390 (30%), Positives = 195/390 (50%), Gaps = 6/390 (1%)

Query: 26  ISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHV 85
           +++ S IGIALGVA LIV +S MNGF   L + IL +  H  +       ++++  L+ V
Sbjct: 1   MTLFSIIGIALGVATLIVVMSVMNGFRARLLDSILGIDGHINVYFDRNINSDYRTVLESV 60

Query: 86  QKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGE 145
           +K+PG+  A    N   ++ + + +    V+GV+ +     + + + V     R F  G 
Sbjct: 61  KKIPGVLKATLMTNDQVIITANSRIVGAVVRGVSAKDLLNNTTIKNSVIVGDVRKFDKG- 119

Query: 146 QQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSG-QLDHSFA 204
             ++IG  +A+ L V  GD + ++            P+     V  I  +   + D++  
Sbjct: 120 --VVIGARLAEVLDVGYGDKIVLISSEGFDSLLSEVPRMKEYEVIAIFDMGMFEYDNTLI 177

Query: 205 MIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRD 264
            +P+  AQ +     S   I + ++D+  AN+L     + T   +  +SW     + +  
Sbjct: 178 YMPIKSAQAFFHYRDSARNIEVFVSDLTKANELANIIEKET--GMEARSWQLQQSHYFNA 235

Query: 265 IQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGL 324
           ++  R +M+L + L+I VA FNIVS L+M V++K   IA++RT GA  G I  IF   GL
Sbjct: 236 LETERNVMFLILTLIIIVAAFNIVSNLMMIVQEKKSAIAIMRTFGATSGSIMRIFCICGL 295

Query: 325 LAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVL 384
           L G  G+  G IIGVV SL +  I  ++E +   + L   +YF   LP  L   D+  + 
Sbjct: 296 LIGFTGTCLGCIIGVVFSLNIENIRVFLESITNVKLLDPMVYFFSSLPVILVPQDIVNIS 355

Query: 385 VTALLLSLLASWYPARRASNIDPARVLSGQ 414
             AL LS LA+  PA +A+  DPA +L  +
Sbjct: 356 ALALFLSFLATVAPALQAAAQDPAEILRYE 385



>gi|39546312|ref|NP_460187.2|   integral membrane protein [Salmonella typhimurium LT2]
          Length = 399

 Score =  249 bits (635), Expect = 1e-64
 Identities = 109/416 (26%), Positives = 203/416 (48%), Gaps = 19/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   + A        Q   +    + G+   AP      +++S  ++    + G++P
Sbjct: 61  GLMPQAILSAEHGSLNPNQ-MPEKAVNLQGVNRIAPLTTGDVVLQSARSVAVGVMLGIDP 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
            Q+  L+     V+       + G+  +I+G+ +A  L V +GD + +M+P+++      
Sbjct: 120 AQKDPLTPYLVNVKQ---SELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +    V G    + ++D    ++ + DA + +     +++G  L + +    + L 
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +            + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 237 QQ---TLPQGTKWQDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     I  +F+  G  AG+ G+L G  +G +++ QL  ++  I   +  
Sbjct: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGALLGAALGALLASQLNNLMPIIGAFLDG 353

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L  +
Sbjct: 354 A----------ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399



>gi|37526704|ref|NP_930048.1|   Lipoprotein releasing system transmembrane protein lolC
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36786136|emb|CAE15188.1|   Lipoprotein releasing system transmembrane protein lolC
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 400

 Score =  245 bits (626), Expect = 2e-63
 Identities = 113/416 (27%), Positives = 202/416 (48%), Gaps = 18/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   +SL IGLR+ RGR        +S +STIGI LGVA LI  LS MNGFER L   IL
Sbjct: 1   MFQSVSLFIGLRYMRGRAADKFGRFVSWLSTIGITLGVAALITVLSVMNGFERSLETSIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   + +V+            +  +  +    P +    +++S  N+    + G+  
Sbjct: 61  GLMPQAVVTSVNGSLDPKAHPASELAALKQVDRMTPLVMGDVVLQSARNVGVGVMLGIAF 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
            + + L+    ++ G      + G    I+G+ +A  L VK+GD + +M+P ++      
Sbjct: 121 DEYEPLT---EYLTGAYRHQLEPGSYNAILGEKLAGELGVKRGDRIRLMVPGASQLTPMG 177

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +    V G    + ++D +  ++   DA + +      ++G  L +++    + L 
Sbjct: 178 RIPSQRLFTVIGTFASNSEVDGTQILVNQQDAARLMRYPPGHITGWRLYLSEPLAVDSLS 237

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
               +     +  K W    G  ++ ++M + +M L + L+I VA FNI+++L + V +K
Sbjct: 238 ---LQTMPEGLLWKDWRERKGEFFQAVRMEKNMMGLLLSLIIAVAAFNIITSLGLLVMEK 294

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     + AIF+  G  AG+ G+L G  +GV++S QL  ++  I  L   
Sbjct: 295 QGEVAILQTQGLVRRQVMAIFMIQGAGAGIIGTLLGTGLGVLLSSQLNNLMPLIGLLTSG 354

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP  +  L V  + ++A+ ++LL++ YP+ RA+ I PA  L  +
Sbjct: 355 V----------ELPVAIEPLQVATIAISAMAIALLSTLYPSWRAAAIQPAEALRYE 400



>gi|15602425|ref|NP_245497.1|   hypothetical protein PM0560 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720826|gb|AAK02644.1|   unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 396

 Score =  244 bits (623), Expect = 3e-63
 Identities = 121/416 (29%), Positives = 197/416 (47%), Gaps = 22/416 (5%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   + L I LR+ R +       L++ +++IGI LGV  LI+ LS MNG E+     +L
Sbjct: 1   MKFSVPLFIALRYWRAKSADRFGRLVTNLASIGIVLGVMALIIVLSVMNGLEQHQKKHVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           A +PH  +  V Q  T   E +      P +  A P      ++++   + A QV GV  
Sbjct: 61  ANIPHAIVMPVTQRITLTDEMIALP---PFVQKAVPINQTQVILQTATGVSAGQVIGVQQ 117

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
             +  L  L   +  D  +    G   ++IG  +A  L++  GD V +M+  ++      
Sbjct: 118 SADDPL--LMDMLSPDFEQILPPGAFNLVIGAQLAQKLQLHIGDKVRLMMTENSQYTPFG 175

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLV 238
             P +    V+ I     +         L+D  + +        G  L + D F   +L 
Sbjct: 176 RVPVQRLFTVSDIYYSGDEASSYEVFAHLSDIGRLMRIQPELAQGYRLFLQDPFQITELP 235

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +   E +        W    G  ++ ++M + +M L + L+I VA  NIV++L + V DK
Sbjct: 236 QYFAEQSWQLY---DWRQQKGEFFQAVRMEKNMMGLLISLIIVVAVSNIVTSLSLMVVDK 292

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G+IA+L+T G     +R+IF++ G L G  G++ G I+GV+V+L L  ++ W       
Sbjct: 293 QGEIAILQTQGLNKRQVRSIFIYQGCLVGFVGTVIGAILGVLVTLNLDRLVGW------- 345

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            F S+DIY    LP+    L    +L  +LLLSL+++ YPA RA+ IDPA  L  +
Sbjct: 346 -FNSADIY----LPTAFDPLQFMIILFFSLLLSLISTIYPAYRAAQIDPAEALRYE 396



>gi|20091320|ref|NP_617395.1|   hypothetical protein MA2489 [Methanosarcina acetivorans C2A]
 gi|19916448|gb|AAM05875.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 389

 Score =  240 bits (612), Expect = 8e-62
 Identities = 90/412 (21%), Positives = 176/412 (42%), Gaps = 28/412 (6%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
             L I LR    RRR       +  + + +AL V V+ V ++ ++GF+ EL    +   P
Sbjct: 2   YELKIALRQVFSRRRQ------TFFAILAVALAVTVITVMMAMLSGFQDELVTSSIENNP 55

Query: 65  HGEIEAVDQP---WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           H  I   D+       ++   D + +  G+ A +P       +E   N   + ++GV+P 
Sbjct: 56  HIVINPQDEEEEFIHLYRYTSDLIAEKEGVIAVSPKYLGQVALEYRDNAEGVSLQGVDPM 115

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
            E+ +  +   V    +         I++G  +A+ L+V  GD V  + P S        
Sbjct: 116 AEENVMRVSEDVIEGDFMTLVHTRYGILLGDQLAENLEVHVGDRVDAVFPGSQTT----- 170

Query: 182 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
                  V G++      D   A   L   Q + +    VS I +++ D + A+ +    
Sbjct: 171 ----SFKVVGLINTGTAEDEVTAYARLDSVQDFFNEPGVVSTIGVRVVDPYQADIIAGSI 226

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
              T   +   SWI     +   ++     + +   L+ G+A F I +TL+  V  ++ +
Sbjct: 227 ERET--GLDAVSWIEENAEILNLLETQTVFVNIFYFLIYGIAGFGIANTLITIVAQRTRE 284

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           I +L+ +GA    I  +F++  ++ G  G + G I+G +V++ L      + +       
Sbjct: 285 IGILKAMGASQKSIMFVFLFQSMILGAIGLILGTILGYIVTVGLQSYEIEVPQ------- 337

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
               + +  LP E+  L+  Y    A ++++++  YPAR+A+ +DP + +  
Sbjct: 338 -EMYFGLQTLPLEIEPLNFVYAAFFAFIINIISGIYPARKAAKLDPVKAIES 388



>gi|50120753|ref|YP_049920.1|   lipoprotein releasing system transmembrane protein [Erwinia
           carotovora subsp. atroseptica SCRI1043]
 gi|49611279|emb|CAG74726.1|   lipoprotein releasing system transmembrane protein [Erwinia
           carotovora subsp. atroseptica SCRI1043]
          Length = 400

 Score =  238 bits (607), Expect = 3e-61
 Identities = 107/416 (25%), Positives = 203/416 (48%), Gaps = 18/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +S IGI LGV  L+  LS MNGFEREL   IL
Sbjct: 1   MYQPVALFIGLRYMRGRASDRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELEGNIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            V+P   I                +  + G+   AP      +++S  ++    + G++P
Sbjct: 61  GVMPQAVISTPQGSLNPVLIPASSLDSLEGVTRVAPLTTGDVVLQSARSVAVGVMLGIDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
            +++ LS     V+    +  +      I+G+ +A+ L V  GD V +M+ +++      
Sbjct: 121 DEKEPLSRYLVNVKQQQLQPGQYQ---AILGEKLAEQLGVNTGDQVRMMVTSASQLTPMG 177

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +    VAG    + ++D    ++   DA + +    + ++G  L +    + + L 
Sbjct: 178 RIPSQRIFTVAGTFAANSEVDSYQLLVNQQDASRLMRYPANHITGWRLWLEKPLSVDTLS 237

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
                        K W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 238 TQ---TLPEGTVWKDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLLVMEK 294

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     + A+F+  G  AG+ G+L G ++G +++ QL  ++  +  L+  
Sbjct: 295 QGEVAILQTQGLTQRQVMAVFMVQGGSAGIVGALLGALLGALLASQLNTLMPVLGVLLDG 354

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP ++  + V  + ++A++++LL++ YP+ RA+ + PA  L  +
Sbjct: 355 A----------ALPVDIDPMQVVTIAISAMVIALLSTLYPSWRAATVQPAEALRYE 400



>gi|48838239|ref|ZP_00295186.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Methanosarcina barkeri str.
           fusaro]
          Length = 389

 Score =  237 bits (606), Expect = 3e-61
 Identities = 110/415 (26%), Positives = 192/415 (46%), Gaps = 29/415 (6%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M   L I LR  R R+        +++S   IAL V VL V  + M GF  EL +  +  
Sbjct: 1   MRYELFIALRQIRARK------FQTILSVGAIALAVMVLTVSQALMVGFTGELYDTTVDK 54

Query: 63  VPHGEIEAVDQP--WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           +P   +   +       ++  +D + K  G+ A +P++      +   N    ++KGV P
Sbjct: 55  LPQVSVSPQEGEDYIYLYRTLIDEIGKTEGVTAVSPFLTGKASFKFKTNSLNAELKGVLP 114

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            QE  +SA+ + +    +R  +     ++IG  +AD L+V  GD V +  PN+NP     
Sbjct: 115 LQENDISAIEADMVEGDFRELEYSRNTVVIGSKLADKLEVNPGDSVDVSFPNANPL---- 170

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
                 L V GI      LD S     L  AQ++ ++   ++G+++++ D     ++   
Sbjct: 171 -----SLRVVGIFHTGSPLDESLTYTSLDTAQEFYNVPDVINGLSVRLEDFNRDREVAAK 225

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
             +        K W  T   + R I +      + + L++ +A F +VS L ++V   + 
Sbjct: 226 IEKT---GYKAKGWTETNPEILRTIAVESTSNNVVLGLIVVIASFGVVSALNLSVIGATS 282

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
            I +LR +GA    IR IFV    + GL G+L G + GVV+SL L               
Sbjct: 283 QIGMLRAMGATISSIRTIFVLQSSILGLLGALIGTLTGVVISLGLGQY--------EMPA 334

Query: 361 LSSDIY-FIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            SS++Y  +  +P  +   D+  +++   LL+L+A  YPA++A+ +DP + +S +
Sbjct: 335 ASSELYGGMATIPIIVRTGDILVIILAVFLLNLIAGIYPAQQAAKLDPVKAISSK 389



>gi|56417192|ref|YP_154266.1|   hypothetical protein AM1183 [Anaplasma marginale str. St. Maries]
 gi|56388424|gb|AAV87011.1|   hypothetical protein AM1183 [Anaplasma marginale str. St. Maries]
          Length = 408

 Score =  236 bits (602), Expect = 9e-61
 Identities = 110/413 (26%), Positives = 200/413 (48%), Gaps = 11/413 (2%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M L  L+  R+ +      + S  +V+S +GI +GVA LI   S MNGF  +L + IL +
Sbjct: 6   MGLEWLLARRYIQSNGGRFLFSTATVLSILGICIGVATLISVTSVMNGFSAKLLSSILGM 65

Query: 63  VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 122
             H  I        ++   +  +  VPG+ +AAP I    L++   N+    V+G++   
Sbjct: 66  NGHITIHCNR---PDYPNVIAEIYHVPGVVSAAPVIEGQALLKYENNIMGAVVRGMHMCD 122

Query: 123 EQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP 182
            +R   L  +V        + G   I++G  +A+++    GD ++I+ P ++P      P
Sbjct: 123 IRR--KLHGYVVRGDVDMLEEG---IVLGFRLAESIGADYGDEITIISPETSPTIFGAVP 177

Query: 183 KRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
           +     V GI  +   + D +FA IPL D+Q      + +  I + + DV  +++ + + 
Sbjct: 178 RTKTYKVTGIFDVGVYEYDSAFAYIPLRDSQLLFGYANRIKYIEVFLEDVTKSSEALVEI 237

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
              T   + ++ W    G  +R +++ R  M+  + L++ VA FNI+S + + V+DK G 
Sbjct: 238 ARRT--SLKVEDWKVQQGQYFRALELERDAMFFILALIVIVAAFNIISGISVLVRDKRGA 295

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           IA++RT+G     +  IF   G   G+ G+  G ++GV  S  +  I  +          
Sbjct: 296 IAIMRTMGVSRYAVMRIFCMCGAFIGILGTSFGCVLGVAFSANIENINNFFSSFGHGTLF 355

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            S  YF++ +  E+ + D+  V++ +L  SLLA+  PA  A+  +P  +L  +
Sbjct: 356 ESIAYFLEGISPEMMFGDIARVVMLSLSASLLAAVPPAIVAARQNPVDILRYE 408



>gi|21226193|ref|NP_632115.1|   ABC transporter permease protein [Methanosarcina mazei Go1]
 gi|20904424|gb|AAM29787.1|   ABC transporter permease protein [Methanosarcina mazei Goe1]
          Length = 392

 Score =  235 bits (600), Expect = 2e-60
 Identities = 104/415 (25%), Positives = 193/415 (46%), Gaps = 29/415 (6%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M   L I  R  R R+        +++S   IA+ V VL V  + M GF  EL    +  
Sbjct: 4   MNYELFIAFRQIRARK------FQTLLSVGAIAIAVMVLTVSQALMVGFTGELYKTTVDK 57

Query: 63  VPHGEIEAVDQP--WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           +PH  +   +       +   ++ +  + G+ A +P++          N    +++GV P
Sbjct: 58  LPHVSVSPQEGEDYIYLYGTLMERIGTIEGVTAVSPFLTGQASFRFKDNSLNAELRGVVP 117

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            QE  +S++   +   ++R  +     ++IG  +A+ L+V  GD +++  PN+NP     
Sbjct: 118 SQENEISSIEEDIVEGSFRELEFSRNTVVIGSKLAEKLEVNLGDSIAVSFPNANPL---- 173

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
                 L V GI      LD S     L  A+++ D+ + V+G+ ++++D     ++  +
Sbjct: 174 -----SLRVVGIFHTRSPLDESLTYTSLDTARRFYDVPNVVNGVWVRLSDFNRDREVAEE 228

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
             E+       + W  T   + R I + R    +   L+I +A F +VSTL ++V   +G
Sbjct: 229 IEEL---GYNARGWTETNPAILRTIAIERTSNNVVYGLIIVIASFGVVSTLNLSVIGATG 285

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
            I +LR +GA    I+ IF+    + GL G+L G   GV++SL +               
Sbjct: 286 QIGMLRAMGAPVSSIQRIFILQSGILGLLGALVGTFAGVLISLAIGQY--------EIPS 337

Query: 361 LSSDIY-FIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             +D+Y  + F+P  +   D+  +++   LL+L+   YPAR+A+ +DP + +S +
Sbjct: 338 TQADVYAGMSFIPIVVRAQDILIIILAVFLLNLITGIYPARQAAKLDPVKAISTR 392



>gi|20092063|ref|NP_618138.1|   hypothetical protein MA3247 [Methanosarcina acetivorans C2A]
 gi|19917277|gb|AAM06618.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 392

 Score =  235 bits (599), Expect = 2e-60
 Identities = 109/415 (26%), Positives = 191/415 (46%), Gaps = 29/415 (6%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M   L I LR  R R+        +++S   IAL V VL +  + M GF  EL +  +  
Sbjct: 4   MRYELFIALRQIRARK------FQTLLSVGAIALAVMVLTISQALMVGFTEELYDTTVDK 57

Query: 63  VPHGEIEAVDQP--WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           +P   +   +       +   ++ +  +  + A +P++          N    ++KGV P
Sbjct: 58  LPQVSVSPQEGEDYIYLYGTLMEEISSIEEVTAVSPFLTGQASFRFKDNSLNAELKGVIP 117

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E  +S++ + +    +R  +     ++IG  +A+ L+V  GD + +  PN+NP     
Sbjct: 118 LREDEISSIEADMVEGNFRELEFSVNTVVIGSKLAEKLEVNVGDSIDVSFPNANPL---- 173

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
                 L V GI      LD S A   L  AQ++ D+   V+GI++++ D     ++  +
Sbjct: 174 -----SLRVVGIFHTGSPLDESLAYTSLDTAQEFYDVPDVVNGISVRLQDFNMDREVAAE 228

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
            G+        K W  T   + R I +      +   L+I +A F +VSTL ++V   +G
Sbjct: 229 IGKT---GYEAKGWTETNPAILRTIAIESTSNNVVYGLIIVIASFGVVSTLNLSVIGATG 285

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
            I +LR +GA    I+ IF+    + GL G+L G   GV++SL +               
Sbjct: 286 QIGMLRAMGAPVSSIQKIFILQSGILGLLGALFGTFAGVLISLAIGGY--------EIPA 337

Query: 361 LSSDIY-FIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            SSD+Y  I F+P  +   D+  ++    LL+L+   YPAR+A+ +DP + +S +
Sbjct: 338 ASSDVYGGISFIPIVVRAQDIVLIIAAVFLLNLITGVYPARQAAKLDPVKSISTR 392



>gi|22125679|ref|NP_669102.1|   hypothetical protein y1785 [Yersinia pestis KIM]
 gi|21958593|gb|AAM85353.1|   hypothetical protein [Yersinia pestis KIM]
 gi|16121894|ref|NP_405207.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis CO92]
 gi|15979664|emb|CAC90448.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis CO92]
 gi|25321147|pir||AE0198   lipoprotein releasing system, transmembrane protein [imported] -
           Yersinia pestis (strain CO92)
          Length = 400

 Score =  235 bits (599), Expect = 2e-60
 Identities = 116/416 (27%), Positives = 209/416 (50%), Gaps = 18/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  LI  LS MNGFER L + IL
Sbjct: 1   MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   I          +     ++ + G++   P      +++S  NL A  + GV+P
Sbjct: 61  GLMPQALITTPQGSLDPNKIPASTLKSLSGVSDIVPLTTADVVLQSARNLAAGVMLGVDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
           QQ +    L +++     +    G   II+G+ +A  L VK+G+ + +M+P+++      
Sbjct: 121 QQHE---PLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +   ++ G    + ++D    ++   DA + +     +++G  L ++   + + L 
Sbjct: 178 RIPSQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLS 237

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +            K W    G +++ ++M + +M L + L+I VA FNI+++L + V +K
Sbjct: 238 QQ---SLPEGTVWKDWRDRKGELFQAVRMEKNMMGLLLSLIIAVAAFNIITSLGLLVMEK 294

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     I  +F+  G  AG+ G+L G  +GV+++ QL  +I  +  LI  
Sbjct: 295 QGEVAILQTQGLSRRQIMLVFMVQGATAGVIGALLGAGLGVLLASQLNTLIPILGVLIDG 354

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP E+  L V  + + A++++LL++ YP+ RA+   PA  L  +
Sbjct: 355 A----------TLPVEIDPLQVTVIALLAMVIALLSTLYPSWRAAAAQPAEALRYE 400



>gi|51596764|ref|YP_070955.1|   ABC transporter/lipoprotein releasing system, permease subunit lolC
           [Yersinia pseudotuberculosis IP 32953]
 gi|51590046|emb|CAH21680.1|   ABC transporter/lipoprotein releasing system, permease subunit lolC
           [Yersinia pseudotuberculosis IP 32953]
          Length = 400

 Score =  235 bits (599), Expect = 2e-60
 Identities = 117/416 (28%), Positives = 210/416 (50%), Gaps = 18/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  LI  LS MNGFER L + IL
Sbjct: 1   MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   I          +     ++ + G++   P      +++S  NL A  + GV+P
Sbjct: 61  GLMPQALITTPQGSLDPNKIPASTLKSLSGVSDIVPLTTADVVLQSARNLAAGVMLGVDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
           QQ +    L +++     +    G   II+G+ +A  L VK+G+ + +M+P+++      
Sbjct: 121 QQHE---PLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +   ++ G    + ++D    ++   DA + +     +++G  L ++   + + L 
Sbjct: 178 RIPSQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLS 237

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +            K W    G +++ ++M + +M L + L+I VA FNI+++L + V +K
Sbjct: 238 QQ---SLPEGTVWKDWRDRKGELFQAVRMEKNMMGLLLSLIIAVAAFNIITSLGLLVMEK 294

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     I  +F+  G  AG+ G+L GV +GV+++ QL  +I  +  LI  
Sbjct: 295 QGEVAILQTQGLSRRQIMLVFMVQGATAGVIGALLGVGLGVLLASQLNTLIPILGVLIDG 354

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP E+  L V  + + A++++LL++ YP+ RA+   PA  L  +
Sbjct: 355 A----------TLPVEIDPLQVTVIALLAMVIALLSTLYPSWRAAAAQPAEALRYE 400



>gi|53732829|ref|ZP_00349585.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           R2846]
          Length = 393

 Score =  234 bits (598), Expect = 3e-60
 Identities = 119/417 (28%), Positives = 202/417 (48%), Gaps = 27/417 (6%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+SL I LR+ R +       L++ ++++GI LGV  LI+ LS MNG E     ++L
Sbjct: 1   MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPG-IAAAAPYINFTGLVESGANLRAIQVKGVN 119
           + +PH  I + +QP          ++ +P  +  A P      + ++   + A Q+ G+ 
Sbjct: 61  SSIPHA-IVSEEQPI----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHK 178
              +  L  + SF Q         GE +++IG  +A  L V  GD + +MI  ++     
Sbjct: 116 SFSDDPL--VESFDQTKFNEILPRGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPF 173

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKL 237
              P +    V+ I    G+     A   + D  + +        G  L + D F   +L
Sbjct: 174 GRVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITEL 233

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
            +           I  W    G  ++ ++M + +M L + L+I VA  NIV++L + V D
Sbjct: 234 PQHFSTQ-----KITDWRVQKGEFFQAVRMEKNMMGLLISLIIVVAISNIVTSLSLMVVD 288

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K G+IA+L+T G     +R++F++ GLL G  G+L G I+GV+ +L LT I+  +     
Sbjct: 289 KQGEIAILQTQGLTKSQVRSVFIYQGLLVGFVGTLLGAILGVLATLNLTEIVSAVNPQGV 348

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       FLP+EL ++ + +V+  +LLLSLL++ YPA RA+ ++PA  L  +
Sbjct: 349 ------------FLPTELSFVQMIFVIGFSLLLSLLSTLYPAYRAAKVEPAAALRYE 393



>gi|57242035|ref|ZP_00369975.1|   conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
 gi|57017227|gb|EAL54008.1|   conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
          Length = 397

 Score =  234 bits (597), Expect = 3e-60
 Identities = 90/413 (21%), Positives = 187/413 (45%), Gaps = 17/413 (4%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M L+  +  ++ R  +    ++L  +++ +G+ +G+ VL+V ++ MNGF++E   R   +
Sbjct: 1   MSLTRYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFQKRFFVM 60

Query: 63  VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 122
                I           E +  +++       +PY++   + +         V GVN ++
Sbjct: 61  NYPITILPKFY-APVDDEFVAELRREFSHLLFSPYLSTQVIAKGDNRFEGGVVFGVNFEE 119

Query: 123 EQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP 182
           E+++    + V  DA ++       I+IG  +A+  ++K+ D +S++  N NP    + P
Sbjct: 120 EKKI----NEVVKDALKDTNLSSYDILIGGALAEEFRLKKNDKLSLIFSNLNPSGFSLTP 175

Query: 183 KRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
              R  V           D ++  +     ++ L +     G+ +   + F   + +   
Sbjct: 176 TTKRFDVKAKFNSGLIFYDKAYMYVKAETLRKVLGVKEGYDGVHIYSENAF---EDIAKL 232

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
                       W       +  +++ +  +++ ++L+I VA  NI+S+L+M V ++  +
Sbjct: 233 RTYLGQDYAAIGWWEQNQNFFSALELEKRALFIVLMLIILVAGLNIISSLLMIVMNRRSE 292

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           IA+L  LGA    I+  F   G+L G  G +CGVI+          ++ W+        L
Sbjct: 293 IALLLALGASKKEIKKSFFALGMLIGGSGMVCGVILAF--------VVLWLLGNFDLVSL 344

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            +D+Y    LP +L  LD    L+ AL++  L+S+YPA++A+ ++    L  +
Sbjct: 345 PADVYGTSKLPLDLSVLDFVLTLMGALVIIALSSFYPAKKATEVNILDTLRNE 397



>gi|42631611|ref|ZP_00157149.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           R2866]
          Length = 393

 Score =  234 bits (596), Expect = 5e-60
 Identities = 119/417 (28%), Positives = 203/417 (48%), Gaps = 27/417 (6%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+SL I LR+ R +       L++ ++++GI LGV  LI+ LS MNG E     ++L
Sbjct: 1   MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPG-IAAAAPYINFTGLVESGANLRAIQVKGVN 119
           + +PH  I + +QP          ++ +P  +  A P      + ++   + A Q+ G+ 
Sbjct: 61  SSIPHA-IVSEEQPI----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHK 178
              +  L  + SF Q         GE +++IG  +A  L V  GD + +MI +++     
Sbjct: 116 SFSDDPL--VESFDQTKFNEILPRGEFKLVIGDQLAQKLGVNIGDKIRLMITDNSQYTPF 173

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKL 237
              P +    V+ I    G+     A   + D  + +        G  L + D F   +L
Sbjct: 174 GRVPMQRLFTVSDIYYGYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITEL 233

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
            +           I  W    G  ++ ++M + +M L + L+I VA  NIV++L + V D
Sbjct: 234 PQHFSTQ-----KITDWRVQKGEFFQAVRMEKNMMGLLISLIIVVAISNIVTSLSLMVVD 288

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K G+IA+L+T G     +R++F++ GLL G  G+L G I+GV+ +L LT I+  +     
Sbjct: 289 KQGEIAILQTQGLTKSQVRSVFIYQGLLVGFVGTLLGAILGVLATLNLTEIVSAVNPQGV 348

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       FLP+EL ++ + +V+  +LLLSLL++ YPA RA+ ++PA  L  +
Sbjct: 349 ------------FLPTELSFVQMIFVIGFSLLLSLLSTLYPAYRAAKVEPAAALRYE 393



>gi|16273455|ref|NP_439704.1|   hypothetical protein HI1555 [Haemophilus influenzae Rd KW20]
 gi|1574399|gb|AAC23204.1|   conserved hypothetical transmembrane protein [Haemophilus
           influenzae Rd KW20]
 gi|1074838|pir||A64036   hypothetical protein HI1555 - Haemophilus influenzae (strain Rd
           KW20)
 gi|1175892|sp|P44252|LOLC_HAEIN   Lipoprotein releasing system transmembrane protein lolC
          Length = 393

 Score =  234 bits (596), Expect = 5e-60
 Identities = 119/417 (28%), Positives = 202/417 (48%), Gaps = 27/417 (6%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+SL I LR+ R +       L++ ++++GI LGV  LI+ LS MNG E     ++L
Sbjct: 1   MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPG-IAAAAPYINFTGLVESGANLRAIQVKGVN 119
           + +PH  I + +QP          ++ +P  +  A P      + ++   + A Q+ G+ 
Sbjct: 61  SSIPHA-IVSEEQPI----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHK 178
              +  L  + SF Q         GE +++IG  +A  L V  GD + +MI  ++     
Sbjct: 116 SFSDDPL--VESFDQTKFNEILPRGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPF 173

Query: 179 LMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKL 237
              P +    V+ I    G+     A   + D  + +        G  L + D F   +L
Sbjct: 174 GRVPMQRLFTVSDIYYGYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITEL 233

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
            +           I  W    G  ++ ++M + +M L + L+I VA  NIV++L + V D
Sbjct: 234 PQH-----FPTQKITDWRVQKGEFFQAVRMEKNMMGLLISLIIVVAISNIVTSLSLMVVD 288

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K G+IA+L+T G     +R++F++ GLL G  G+L G I+GV+ +L LT I+  +     
Sbjct: 289 KQGEIAILQTQGLTKSQVRSVFIYQGLLVGFVGTLLGAILGVLATLNLTDIVSAVNPQGV 348

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       FLP+EL ++ + +V+  +LLLSLL++ YPA RA+ ++PA  L  +
Sbjct: 349 ------------FLPTELSFVQMIFVIGFSLLLSLLSTLYPAYRAAKVEPAAALRYE 393



>gi|48867198|ref|ZP_00320783.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           86-028NP]
          Length = 312

 Score =  233 bits (595), Expect = 7e-60
 Identities = 160/313 (51%), Positives = 224/313 (71%), Gaps = 2/313 (0%)

Query: 103 LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQ 162
           +VE+G+ L+ +QVKGV  Q E ++S++ +FVQ   W  F+  E  +++G G+A  L VK 
Sbjct: 1   MVENGSKLKVVQVKGVEKQAEDKVSSIGNFVQEQGWNKFEK-EGGLVLGAGIAKELDVKV 59

Query: 163 GDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSV 221
           GDW++++I   N + +  QP R  + V  IL+L GQLD+S+A++PLA AQ +L      +
Sbjct: 60  GDWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQI 119

Query: 222 SGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIG 281
           +G+ LK+ D F+A  L           +Y+++WI  +GYMYRDIQ+IR +MY+AMVLVIG
Sbjct: 120 TGVELKLDDPFSARNLDLSMLNDYPQMLYMQNWISKFGYMYRDIQLIRTVMYIAMVLVIG 179

Query: 282 VACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVV 341
           VACFNIVSTL+MAVKDK GDIA++RTLGA +  I+ IF+WYGL AG+ G L G+++G+++
Sbjct: 180 VACFNIVSTLIMAVKDKQGDIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGIVLGIIL 239

Query: 342 SLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARR 401
           +L LT  I+ IE +IG + LS D+YF+DFLPSELHWLDV  VLV AL LSL+AS YPA R
Sbjct: 240 ALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWLDVLMVLVAALALSLMASLYPASR 299

Query: 402 ASNIDPARVLSGQ 414
           A+ + PA+VLS  
Sbjct: 300 AAKLQPAQVLSSH 312



>gi|20090527|ref|NP_616602.1|   hypothetical protein MA1674 [Methanosarcina acetivorans C2A]
 gi|19915553|gb|AAM05082.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 389

 Score =  233 bits (594), Expect = 8e-60
 Identities = 93/413 (22%), Positives = 181/413 (43%), Gaps = 30/413 (7%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
             L I LR    R++       ++ + + +AL VAV+ V ++ ++GF+ EL +  +   P
Sbjct: 2   YELKIALRQVLSRKKQ------TLFAILAVALAVAVITVMMAMLSGFQDELVSSSIENNP 55

Query: 65  HGEIEAVDQP---WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           H  I   D+       ++     + +  G+ A +P       +E   N   + ++GV+P 
Sbjct: 56  HIVITPQDEKEEFIHLYRHTSALIAEKEGVIAVSPKYLGQVALEYRDNAEGVSLQGVDPV 115

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
            E+ +  +   V    +         I++G  +A+ L+V  GD V  + P S        
Sbjct: 116 AEENVMRVSEDVVEGDFMTLVHTRDGILLGDKLAENLEVHVGDRVDAVFPGS-------- 167

Query: 182 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
            K     V G++      D   A   L   Q + D    VS I +++ D + A  +    
Sbjct: 168 -KTTSFKVIGLIHTGTSADEVTAYARLDSVQDFFDEPGVVSNIGVRVADPYQAEAIAASI 226

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
            E T   +   SW      +   +      + +  +L+ G+A F I +TL+  V  ++ +
Sbjct: 227 EEET--GLDAVSWSEANAEILNLLDTQMVFVNIFYLLIYGIAGFGIANTLITIVAQRTRE 284

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           I +L+ +GA    I  +F++  L+ G  G + G+I+G +V++ L               +
Sbjct: 285 IGILKAMGASQKSIMVVFLFQSLVLGAIGLVLGIILGYIVTIALQNY---------EIEV 335

Query: 362 SSDIYF-IDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
             ++YF +  LP E+  L+  Y    A ++++++  YPAR+A+ +DP + +  
Sbjct: 336 PQEMYFGLQTLPLEVKPLNFVYAAFFAFIVNIISGIYPARKAAKLDPVKAIES 388



>gi|48838240|ref|ZP_00295187.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Methanosarcina barkeri str.
           fusaro]
          Length = 398

 Score =  232 bits (592), Expect = 1e-59
 Identities = 89/412 (21%), Positives = 180/412 (43%), Gaps = 28/412 (6%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
             L I LR    R+R       +  + + +AL VAV+ V ++ ++GF+ EL        P
Sbjct: 11  YELKIALRQVFSRKRQ------TFFAILAVALAVAVITVMMAMLSGFQGELIKSSTENSP 64

Query: 65  HGEIEAVD---QPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           H  I   D        ++     + +  G+ A +P       +E   N  AI ++G+ P+
Sbjct: 65  HIVINPQDEKDGFIHLYKSNSALIMEKEGVIAVSPKYLGQAALEYKDNAEAISLQGIEPE 124

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
            E ++  +   +   ++ +       I++G  +A+ L V+ GD V  + P S        
Sbjct: 125 AEDKVMRVSKDMIEGSFLSLTHTRHGIVLGDKLAENLGVQPGDRVDAVFPGS-------- 176

Query: 182 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
            K     V G++    + D   A   L   Q + +    VS I ++++D + A+ +    
Sbjct: 177 -KTTSFKVIGLIHTGTEADEVTAYARLDSVQDFFNEPGVVSTIGVRVSDPYQADIIASSI 235

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
              T   +   SWI     +   +   +  + +  +L+ G+A F I +TL+  V  ++ +
Sbjct: 236 ERETE--LNAVSWIEANAEILNLLNTQKVFVNVFYILIYGIAGFGIANTLITIVAQRTRE 293

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           I +L+ +GA    I  +F++  ++ G  G + G I+G + ++ L      + +       
Sbjct: 294 IGILKAMGASQKSIMIVFLFQSVILGAMGLVLGTILGYIATITLQSYKIAVPQ------- 346

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
               + +  LP E+  L+  Y    A ++++++  YPAR+A+ +DP + +  
Sbjct: 347 -EMYFGLQTLPLEVEPLNFVYAAFFAFIINIISGIYPARKAAKLDPVKAIES 397



>gi|58696954|ref|ZP_00372446.1|   ABC transporter, permease protein [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58536811|gb|EAL60037.1|   ABC transporter, permease protein [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 364

 Score =  228 bits (582), Expect = 2e-58
 Identities = 110/369 (29%), Positives = 180/369 (48%), Gaps = 6/369 (1%)

Query: 47  AMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVES 106
            MNGF  +L + IL +  H  +       +++      ++++PGI  A P  N   ++ +
Sbjct: 1   MMNGFRAKLLDSILGIDGHINVYFDRNINSDYYAVSKSIERIPGILKATPMTNDQVIIVA 60

Query: 107 GANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWV 166
              +    V+GV+ +     +A+ + V     + F  G   IIIG  +A+AL V  GD +
Sbjct: 61  NGKIAGSVVRGVSTKDLLDSTAVTNNVIIGDVKKFDEG---IIIGARLAEALNVDYGDEI 117

Query: 167 SIMIPNSNPEHKLMQPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIA 225
           + +            P+  +  V  I  +   + D++   +PL  AQ + +  +S+  I 
Sbjct: 118 TFISSEEFDALLGEMPRMKKYKVIAIFDMGMFEYDNTLIYMPLKSAQAFFNYKNSIKNIE 177

Query: 226 LKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF 285
           + + DV  A+KL     +     +  +SW     + +  ++  R +M+L + L+I VA F
Sbjct: 178 VLVDDVTRADKLADAIEKEI--GMEAESWQSQQSHYFSALKTERNVMFLILTLIIVVAAF 235

Query: 286 NIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQL 345
           NI+S L+M V++K   IA++RT GA  G I  IF   GLL G  G+  G IIGVV SL +
Sbjct: 236 NIISNLMMIVQEKKSAIAIMRTFGATSGSIMRIFCACGLLIGFTGTCLGCIIGVVFSLNI 295

Query: 346 TPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNI 405
             I  ++E +   +     IYF   LP  L   DV  +   ALLLS LA+  PA +A+  
Sbjct: 296 ESIRVFLENITNVKLFDPMIYFFSSLPVILVPQDVVNISALALLLSFLATIAPALQAAAQ 355

Query: 406 DPARVLSGQ 414
           DPA +L  +
Sbjct: 356 DPAEILRYE 364



>gi|27361560|gb|AAO10468.1|   Conserved hypothetical protein [Vibrio vulnificus CMCP6]
 gi|27365413|ref|NP_760941.1|   hypothetical protein VV12080 [Vibrio vulnificus CMCP6]
          Length = 373

 Score =  227 bits (579), Expect = 4e-58
 Identities = 110/388 (28%), Positives = 185/388 (47%), Gaps = 17/388 (4%)

Query: 29  ISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKV 88
           +ST GI +GV  L+  LS MNGFE +L  RIL V+P   + ++D   T      D V+ +
Sbjct: 1   MSTAGITVGVMSLVTVLSVMNGFEAQLKERILGVLPQA-VVSMDGGKTPHTTPPDFVRAL 59

Query: 89  PGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQI 148
                  P +    +++S + L    + G+ P  +     + + +        +AG+ Q+
Sbjct: 60  SPHYQPTPLVRSEAVIQSPSQLSVGYLIGIEPSADD---PIENHLIAGRLSQLEAGKYQV 116

Query: 149 IIGKGVADALKVKQGDWVSIMIPNSNP-EHKLMQPKRVRLHVAGILQLSGQLDHSFAMIP 207
            +G  +A +L V  GD V +M+ +++        P +    VAG+      +D    +  
Sbjct: 117 FLGHFLARSLNVSMGDKVRLMVTSASQFTPLGRIPSQRNFTVAGMFNTGSDIDGQLMVTH 176

Query: 208 LADAQQYLDMGSS-VSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
           + DA + L + S  +SG  L   D F   +                 W    G +++ ++
Sbjct: 177 IEDAGRLLRLPSKTISGWRLYFDDPFQVTEAA---NTPLPDGWQWSDWRAQRGELFQAVK 233

Query: 267 MIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLA 326
           M + +M L + L++ VA FNI+S L+M V +K  ++A+L+T G     I AIF+  G  +
Sbjct: 234 MEKNMMGLMLGLIVAVAAFNIISALIMVVMEKQSEVAILKTQGMNSFGIMAIFMVQGASS 293

Query: 327 GLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVT 386
           G+ GSL G  +GV++S  L  I+E     +          F   LP  +    +  V+V 
Sbjct: 294 GIIGSLFGGAVGVLLSQNLNTILETAGVALFT--------FGGSLPVLIQPFQIVAVVVL 345

Query: 387 ALLLSLLASWYPARRASNIDPARVLSGQ 414
           A+LLSLLA+ YP+ RAS++ PA  L  +
Sbjct: 346 AVLLSLLATLYPSYRASSVKPAEALRYE 373



>gi|23467309|ref|ZP_00122892.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus somnus 129PT]
          Length = 396

 Score =  227 bits (578), Expect = 6e-58
 Identities = 117/416 (28%), Positives = 196/416 (47%), Gaps = 22/416 (5%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+SL I LR+ R +       L++ ++T+GI LGV  LI+ LS MNG E+    ++L
Sbjct: 1   MTFPISLFIALRYWRAKSADHFGQLVTTLATVGIILGVMALIIVLSVMNGLEKYQKQQVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           + +PH  +   +          D       +    P    + + ++   + A Q+ GV  
Sbjct: 61  SNIPHSILMPKNNSIYLTASQPDMP---DFVQKVVPINTTSVVFQTAQGVSAGQILGVQK 117

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
             +  L  L  F +    +    GE ++IIG  +A  L V+ GD V +M+  ++      
Sbjct: 118 FSDDPL--LSEFSENHFSQLLPIGEFKLIIGWKLAQKLNVQIGDKVRVMVTENSQYTPFG 175

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLV 238
             P +    ++ I     +         LAD  + +      V G  L + D F  ++L 
Sbjct: 176 RVPVQRLFTISDIYSSFSEQASYAVFANLADIGRLMRIKPEQVQGYRLFLQDPFFISELP 235

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +           I  W    G  ++ ++M + +M L + L+I VA  NIV++L + V DK
Sbjct: 236 KFF---PTEQWKIVDWRSQKGEFFQAVRMEKNMMSLLISLIIVVAVSNIVTSLSLMVVDK 292

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G+IA+L+T G + G +R IF+  G   G  G++ G  +GVVV++ L  II+WI      
Sbjct: 293 QGEIAILQTQGLRKGQVRNIFILQGFFVGASGAVLGGGLGVVVAMNLAKIIQWINPQG-- 350

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                      FLP+E++   +  +L  +L LSL+++ YPA RAS I+PA+ L  +
Sbjct: 351 ----------IFLPTEINVYQIALILFFSLTLSLISTIYPAYRASKIEPAQALRYE 396



>gi|52425242|ref|YP_088379.1|   hypothetical protein MS1187 [Mannheimia succiniciproducens MBEL55E]
 gi|52307294|gb|AAU37794.1|   unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 397

 Score =  226 bits (575), Expect = 1e-57
 Identities = 113/417 (27%), Positives = 194/417 (46%), Gaps = 23/417 (5%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+SL I LR+ R +       L++ +++ GI LGV  LI+ LS MNG E+    ++L
Sbjct: 1   MNFPVSLYIALRYWRAKSADRFARLVTNLASSGIVLGVMALIIVLSVMNGLEKHQKQQVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           + +PH  +   +                  +  A P  +   ++++   + A  + GV  
Sbjct: 61  SGIPHAVLMPQEGYLDLQAAQPSMP---DFVRQAVPINSTNVILQTAQGVSAGHIIGVQK 117

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
             +  +  L    Q        AGE +I+IG  +AD L++  GD V +MI  ++      
Sbjct: 118 PSDDLI--LDYLTQQQLSELLPAGEFKILIGNRLADKLRLNIGDKVRLMITENSQYTPFG 175

Query: 180 MQPKRVRLHVAGI-LQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKL 237
             P +    V+ I    + ++        L+D  + +      V G  L + D F    L
Sbjct: 176 RVPTQRLFTVSDIYFSDNSEVSGYEIFANLSDIGRLMRIRPEQVQGYRLFLDDPFQITAL 235

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
            +           ++ W    G  ++ ++M + +M L + L+I VA  NI+++L + V D
Sbjct: 236 PQFFSADKWK---LEDWRSQKGEFFQAVRMEKNMMGLLISLIIIVAISNIITSLSLMVVD 292

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           K G+IA+L+T G     +R IF+  G L GL G++ G I+GV+++L L  IIE   +   
Sbjct: 293 KQGEIAILQTQGLNKRQVRRIFILQGFLVGLVGTIIGTILGVLITLNLADIIELFGQRG- 351

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       FLP+ L    +  ++  +LLLSLL++ YPA RA+ ++PA  L  +
Sbjct: 352 -----------IFLPTSLELGQIIVIVAFSLLLSLLSTIYPAYRAAKVEPAEALRYE 397



>gi|21228952|ref|NP_634874.1|   ABC transporter, permease protein [Methanosarcina mazei Go1]
 gi|20907489|gb|AAM32546.1|   ABC transporter, permease protein [Methanosarcina mazei Goe1]
          Length = 405

 Score =  225 bits (574), Expect = 2e-57
 Identities = 92/412 (22%), Positives = 178/412 (43%), Gaps = 28/412 (6%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
             L I LR    R++       ++ + + +AL VAV+ V ++ ++GF+ EL    +   P
Sbjct: 18  YELKIALRQILSRKKQ------TLFAILAVALAVAVITVMMAMLSGFQDELVRSSIENNP 71

Query: 65  HGEIEAVDQP---WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           H  I   D+       ++     + K  G+ A +P       +E   N   + ++GVNP+
Sbjct: 72  HIVISPQDEGEEFIHLYRYTSALIAKKEGVIAVSPKYLGQAALEYRDNAEGVSLQGVNPE 131

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
            E+ +  +   V           +  I++G  +A+ L+V  GD V ++ P S        
Sbjct: 132 SEENVMRVNKDVIEGDLLTLVHTKYGILLGDRLAENLEVHIGDRVDVVFPGSQTT----- 186

Query: 182 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
                  V G++      D + A   L   Q + +    VS I +++ D + AN +    
Sbjct: 187 ----SFKVVGLVHTGTAADETIAYARLDSVQDFFNEPGVVSTIGVRVADPYQANVIASSI 242

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
              T   +   SW      +   ++     + +  +L+ G+A F I +TL+  V  ++ +
Sbjct: 243 ERET--GLNAVSWSEANAEILGLLETQMVFVNIFYLLIYGIAGFGIANTLITIVAQRTRE 300

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           I +L+ +GA    I  IF++  L+ G  G + G ++G +  + L      + +       
Sbjct: 301 IGILKAMGASQKSIMVIFIFQSLVLGAIGLVLGTVLGYITIVALQNYKIEVPQ------- 353

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
               + +  LP E+  L+  Y    A ++++L+  YPAR+AS +DP + +  
Sbjct: 354 -EMYFGLQTLPLEVEALNFVYAAFFAFIVNILSGIYPARKASKLDPVKAIES 404



>gi|32030057|ref|ZP_00132977.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus somnus 2336]
          Length = 396

 Score =  225 bits (573), Expect = 2e-57
 Identities = 117/416 (28%), Positives = 196/416 (47%), Gaps = 22/416 (5%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P+SL I LR+ R +       L++ ++T+GI LGV  LI+ LS MNG E+    ++L
Sbjct: 1   MTFPISLFIALRYWRAKSADHFGQLVTTLATVGIILGVMALIIVLSVMNGLEKYQKQQVL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           + +PH  +   +          D       +    P    + + ++   + A Q+ GV  
Sbjct: 61  SNIPHSILMPKNNSIYLIASQPDMP---DFVQKVVPINTTSVVFQTAQGVSAGQILGVQK 117

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
             +  L  L  F +    +    GE ++IIG  +A  L V+ GD V +M+  ++      
Sbjct: 118 FSDDPL--LSEFSENHFSQLLPIGEFKLIIGWKLAQKLNVQIGDKVRVMVTENSQYTPFG 175

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLV 238
             P +    ++ I     +         LAD  + +      V G  L + D F  ++L 
Sbjct: 176 RVPVQRLFTISDIYSSFSEQASYAVFANLADIGRLMRIKPEQVQGYRLFLQDPFFISELP 235

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +           I  W    G  ++ ++M + +M L + L+I VA  NIV++L + V DK
Sbjct: 236 KFF---PTEQWKIVDWRSQKGEFFQAVRMEKNMMSLLISLIIVVAVSNIVTSLSLMVVDK 292

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G+IA+L+T G + G +R IF+  G   G  G++ G  +GVVV++ L  II+WI      
Sbjct: 293 QGEIAILQTQGLRKGQVRNIFILQGFFVGASGAVLGGGLGVVVAMNLAKIIQWINPQG-- 350

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                      FLP+E++   +  +L  +L LSL+++ YPA RAS I+PA+ L  +
Sbjct: 351 ----------IFLPTEINVYQIALILFFSLTLSLISTIYPAYRASKIEPAQALRYE 396



>gi|57237769|ref|YP_179017.1|   permease, putative [Campylobacter jejuni RM1221]
 gi|57166573|gb|AAW35352.1|   permease, putative [Campylobacter jejuni RM1221]
          Length = 401

 Score =  223 bits (568), Expect = 8e-57
 Identities = 91/417 (21%), Positives = 181/417 (43%), Gaps = 19/417 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   +   +  ++ R  +    ++L  +++ +G+ +G+ VL+V ++ MNGF++E   R  
Sbjct: 1   MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +     I           E +D ++K       +PYI+   +V+         + GVN 
Sbjct: 61  VMNYPITILPKFY-APVNDEFIDELRKTFPNLLFSPYISTQVVVKGDNRFEGGVLFGVNF 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             E+++    + V   A ++       I++G  + D   + + D +S++  N NP    +
Sbjct: 120 NDEKKI----NEVVAKALKDENLSGFDILVGSALTDEFGLHKNDKLSLIFSNLNPSGFSL 175

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSS--VSGIALKMTDVFNANKL 237
            P+  R  V           D ++    +   ++ L M  +    GI +   + F   K 
Sbjct: 176 IPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPNYDGIHVYSDNAF---KD 232

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
           V            +  W       +  +++ +  +++ ++L+I VA  NIVS+L+M V +
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIILVASLNIVSSLLMIVMN 292

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           +  +IA+L  LGA    ++  F   G+L G  G + GV++       L            
Sbjct: 293 RRSEIALLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAFFALWLLGN--------FD 344

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
              L +D+Y    LP +L  +D    +V AL++  L+S+YPA++A+ I+    L  +
Sbjct: 345 IVTLPADVYGTSKLPLDLSLMDFSLTIVGALIIIALSSFYPAKKATQINILDTLRNE 401



>gi|53729136|ref|ZP_00134109.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 390

 Score =  222 bits (567), Expect = 1e-56
 Identities = 104/410 (25%), Positives = 186/410 (45%), Gaps = 27/410 (6%)

Query: 7   LLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHG 66
           L I  R+ R +       L++ +++ GI LGV  L++ LS MNG E      +L+ +PH 
Sbjct: 6   LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65

Query: 67  EIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRL 126
            +   +  +   Q           +           +++S   + A Q+ GV  + +   
Sbjct: 66  IVLPQEGHFDKNQSLSLPAFASKSV----AINKANVIIQSQQGINAGQLLGVENESDD-- 119

Query: 127 SALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKLMQPKRV 185
              P  +  D       GE  ++IG  +A+ L +  G+ + +MI  ++        P + 
Sbjct: 120 ---PMLIGEDVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPMGRVPVQR 176

Query: 186 RLHVAGILQLSGQLDHSFAMIPLADAQQYLD-MGSSVSGIALKMTDVFNANKLVRDAGEV 244
             +V GI   + +         LAD  + L      V G+ L + D F   +L +     
Sbjct: 177 LFNVVGIYHSNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELNQHFDA- 235

Query: 245 TNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAV 304
             +   I  W    G  ++ ++M + +M L + L+I VA  NIV++L + V DK  +IA+
Sbjct: 236 --NNYKISDWREQKGEFFQAVRMEKNMMGLLISLIIIVAISNIVTSLSLMVVDKQAEIAI 293

Query: 305 LRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSD 364
           L+T G     +  IF++ G + G+ GS+ G IIG V++L L  I+  +   I        
Sbjct: 294 LQTQGLTKRQVTQIFIFQGAIVGVIGSILGGIIGTVITLNLDEIVALLNPNI-------- 345

Query: 365 IYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                 LP+ +  + V  ++V +++LSL+ + YPA RA+ I+PA+ L  +
Sbjct: 346 -----HLPTLISPMQVATIIVISIVLSLVCTLYPAYRAAKIEPAQALRYE 390



>gi|34557623|ref|NP_907438.1|   hypothetical protein WS1259 [Wolinella succinogenes DSM 1740]
 gi|34483340|emb|CAE10338.1|   conserved hypothetical protein [Wolinella succinogenes]
          Length = 403

 Score =  222 bits (567), Expect = 1e-56
 Identities = 92/412 (22%), Positives = 182/412 (44%), Gaps = 17/412 (4%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
           L   +  R+ R  +    +S+ ++++  G+A+GV VLIV ++ MNGF+++   ++  +  
Sbjct: 7   LIPYLTKRYLRFDKSQPFISIAAILAFAGVAIGVMVLIVAMAIMNGFDKDFERKLFTMNY 66

Query: 65  HGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQ 124
              +          +E L  ++        +PY+    + +SG  +    V GV+ ++E+
Sbjct: 67  PLTLYP-KVSQGISEELLKELESSFPHLLFSPYLRTQAISKSGDAMEGAVVFGVDFEREK 125

Query: 125 RLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKR 184
           +++ + +    ++     +G   I++G  + +   + +   + ++     P    + P  
Sbjct: 126 QINEVIAEALKESEI---SGRFDILVGSELRNEFFLARDSKLMLIFTQLEPTGLSLSPTM 182

Query: 185 VRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLVRDAG 242
            R  V G  +      D  +    L   +           GI +   +     K +    
Sbjct: 183 KRFDVKGFFRSGLTAYDKGYIFASLEAIRAIKKKEEGYYDGIHVFAKEPM---KEIDSIR 239

Query: 243 EVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDI 302
                   I  W    G  +  +Q+ +  +++ ++L+I +A  NI+S+L+M V ++  +I
Sbjct: 240 AKLPLEAGIVGWWQQNGNFFAALQLEKRALFIVLMLIILIASLNIISSLLMTVMNRRREI 299

Query: 303 AVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLS 362
           A+L TLGA    I+  F   G   GL G   GV++          I  W+        L 
Sbjct: 300 ALLLTLGATQSEIKRTFFRLGNTIGLSGIALGVLLA--------GIALWVLSTFPIISLP 351

Query: 363 SDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           +D+Y    LP EL W+D   +L+ + L+ LL+S+YPA +A+ IDP  VL  +
Sbjct: 352 ADVYGSSKLPLELSWIDFGMILLGSTLIVLLSSYYPAYQATKIDPLSVLRNE 403



>gi|6968378|emb|CAB73198.1|   putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|11279732|pir||D81368   probable integral membrane protein Cj0941c [imported] -
           Campylobacter jejuni (strain NCTC 11168)
 gi|15792270|ref|NP_282093.1|   putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
          Length = 401

 Score =  221 bits (564), Expect = 3e-56
 Identities = 89/417 (21%), Positives = 180/417 (43%), Gaps = 19/417 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   +   +  ++ R  +    ++L  +++ +G+ +G+ VL+V ++ MNGF++E   R  
Sbjct: 1   MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +     I           E +D ++K       +PY++   +V+         + GVN 
Sbjct: 61  VMNYPITILPKFY-APVNDEFIDELRKTFPNLLFSPYLSTQVVVKGDNRFEGGVLFGVNF 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
             E+++    + V   A ++       I++G  + D   + + D +S++  N NP    +
Sbjct: 120 NDEKKI----NEVVAKALKDENLSGFDILVGSALTDEFGLHKNDKLSLIFSNLNPSGFSL 175

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSS--VSGIALKMTDVFNANKL 237
            P+  R  V           D ++    +   ++ L +  +    GI +   + F   K 
Sbjct: 176 VPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGIPKNPNYDGIHVYSDNAF---KD 232

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
           V            +  W       +  +++ +  +++ ++L+I VA  NIVS+L+M V +
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIILVASLNIVSSLLMIVMN 292

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           +  +IA+L  LGA    ++  F   G+L G  G + GV++       L            
Sbjct: 293 RRSEIALLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAFFALWLLGN--------FD 344

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
              L  D+Y    LP +L  +D    +V AL++  L+S+YPA++A+ I+    L  +
Sbjct: 345 IVTLPVDVYGTSKLPLDLSLMDFSLTIVGALIIIALSSFYPAKKATQINILDTLRNE 401



>gi|59801781|ref|YP_208493.1|   putative ABC transporter, ATP-binding protein [Neisseria
           gonorrhoeae FA 1090]
 gi|59718676|gb|AAW90081.1|   putative ABC transporter, ATP-binding protein [Neisseria
           gonorrhoeae FA 1090]
          Length = 644

 Score =  221 bits (564), Expect = 3e-56
 Identities = 61/406 (15%), Positives = 151/406 (37%), Gaps = 48/406 (11%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQ---- 79
            + S+++ +GI +G+A ++  ++  NG ++++   I ++  +       + + + +    
Sbjct: 266 KMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKI 325

Query: 80  -----EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQ 134
                +    + K   +A+A P  +  G +          + GV  Q            +
Sbjct: 326 KTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGR 385

Query: 135 GDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQ 194
                + K   Q ++I + V D L             +S+P  K +  ++  L V G+++
Sbjct: 386 LFDENDVKEDAQVVVIDQNVKDKL-----------FADSDPLGKTILFRKRPLTVIGVMK 434

Query: 195 ----LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN---- 246
                 G  D      P       +   S  + I +K+ D  N     +   E+      
Sbjct: 435 KDENAFGNSDVLMLWSPYTTVMHQITGESHTNSITVKIKDNANTRVAEKGLAELLKARHG 494

Query: 247 -SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
               ++ +       +      ++ ++    ++ + V    +++ ++++V +++ +I + 
Sbjct: 495 TEDFFMNNSDSIRQMVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIR 554

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
             +GA+ G I   F+   +L  + G L GV +   VSL                      
Sbjct: 555 MAIGARRGNILQQFLIEAVLICIIGGLVGVGLSAAVSLVFN------------------- 595

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
           +F+   P ++    V   +  +  + +   + PA +A+ ++P   L
Sbjct: 596 HFVTDFPMDISAASVIGAVACSTGIGIAFGFMPANKAAKLNPIDAL 641



>gi|15611791|ref|NP_223442.1|   hypothetical protein jhp0724 [Helicobacter pylori J99]
 gi|4155280|gb|AAD06298.1|   putative [Helicobacter pylori J99]
 gi|7464818|pir||D71897   hypothetical protein jhp0724 - Helicobacter pylori (strain J99)
          Length = 410

 Score =  221 bits (562), Expect = 5e-56
 Identities = 84/417 (20%), Positives = 187/417 (44%), Gaps = 13/417 (3%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
              L   +  R+ R  +    +S+ ++++  G+A+GV VLIV ++ MNG  +E   ++  
Sbjct: 3   NRSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFV 62

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +     +     P+   +E +  ++K       +PY+     ++S  ++    V GV+  
Sbjct: 63  MNYPLTLYTTS-PYGISEEVVQALEKKFPNLLFSPYLQTQSPIKSAHSMNGGVVFGVDFS 121

Query: 122 QEQRLSALPSF-VQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +E+ ++ + +  ++     +       +I+GK +  +L +       +      P    +
Sbjct: 122 KERHINEVLNDALKNINENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTL 181

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDV-FNANKL 237
            P   R  + G         D S+    L        +      G+ +       +  KL
Sbjct: 182 SPIMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIEKL 241

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
                 + +  + I+ W    G  +  +++ +  +++ ++L+I +A  NI+S+L+M V +
Sbjct: 242 RNALKTINHHGIGIEGWWQQNGNFFSAMELEKRALFIVLMLIILMASLNIISSLLMVVMN 301

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           +  +IA+L ++G+    I+  F + G + GL G + GV++  +    L+        +  
Sbjct: 302 RRKEIALLFSMGSSQKEIQKTFFYLGNIIGLGGVILGVVLAFISMYLLS--------VFP 353

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
              L +D+Y I+ LP +L  +D    L+ ++++  L+S+YP+++AS ID   VL  +
Sbjct: 354 IISLPADVYGINTLPLDLSLMDFTLTLIGSVIIVALSSYYPSKKASAIDALSVLRNE 410



>gi|56385102|gb|AAV85982.1|   MacB [Neisseria gonorrhoeae]
          Length = 644

 Score =  221 bits (562), Expect = 5e-56
 Identities = 61/406 (15%), Positives = 151/406 (37%), Gaps = 48/406 (11%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQ---- 79
            + S+++ +GI +G+A ++  ++  NG ++++   I ++  +       + + + +    
Sbjct: 266 KMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKI 325

Query: 80  -----EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQ 134
                +    + K   +A+A P  +  G +          + GV  Q            +
Sbjct: 326 KTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGR 385

Query: 135 GDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQ 194
                + K   Q ++I + V D L             +S+P  K +  ++  L V G+++
Sbjct: 386 LFDENDVKEDAQVVVIDQNVKDKL-----------FADSDPLGKTILFRKRPLTVIGVMK 434

Query: 195 ----LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN---- 246
                 G  D      P       +   S  + I +K+ D  N     +   E+      
Sbjct: 435 KDENAFGNSDVLMLWSPYTTVMHQITGESHTNSITVKIKDNANTRVAEKGLAELLKARHG 494

Query: 247 -SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
               ++ +       +      ++ ++    ++ + V    +++ ++++V +++ +I + 
Sbjct: 495 TEDFFMNNSDSIRQMVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIR 554

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
             +GA+ G I   F+   +L  + G L GV +   VSL                      
Sbjct: 555 MAIGARRGNILQQFLIEAVLICIIGGLVGVGLSAAVSLVFN------------------- 595

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
           +F+   P ++    V   +  +  + +   + PA +A+ ++P   L
Sbjct: 596 HFVTDFPMDISAASVIGAVACSTGIGIAFGFMPANKAAKLNPIDAL 641



>gi|7379451|emb|CAB84013.1|   putative ABC transporter ATP-binding protein [Neisseria
           meningitidis Z2491]
 gi|15793705|ref|NP_283527.1|   ABC transporter ATP-binding protein [Neisseria meningitidis Z2491]
 gi|11278931|pir||C81916   probable ABC transporter ATP-binding protein NMA0729 [imported] -
           Neisseria meningitidis (strain Z2491 serogroup A)
          Length = 644

 Score =  220 bits (560), Expect = 7e-56
 Identities = 60/406 (14%), Positives = 152/406 (37%), Gaps = 48/406 (11%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQ---- 79
            + S+++ +GI +G+A ++  ++  NG ++++   I ++  +       + + + +    
Sbjct: 266 KMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRI 325

Query: 80  -----EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQ 134
                +    + K   +A+A P  +  G +          + GV  Q            +
Sbjct: 326 KTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGR 385

Query: 135 GDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQ 194
                + K   Q ++I + V D L             +S+P  K +  ++  L V G+++
Sbjct: 386 LFDENDVKEDAQVVVIDQNVKDKL-----------FADSDPLGKTILFRKRPLTVIGVMK 434

Query: 195 ----LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN---- 246
                 G  D      P       +   S  + I +K+ D  N     +   ++      
Sbjct: 435 KDENAFGNSDVLMLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHG 494

Query: 247 -SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
               ++ +       +      ++ ++    ++ + V    +++ ++++V +++ +I + 
Sbjct: 495 TEDFFMNNSDSIRQIVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIR 554

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
             +GA+ G I   F+   +L  + G L GV +   VSL                      
Sbjct: 555 MAIGARRGNILQQFLIEAVLICVIGGLVGVGLSAAVSLVFN------------------- 595

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
           +F+   P ++  + V   +  +  + +   + PA +A+ ++P   L
Sbjct: 596 HFVTDFPMDISAMSVIGAVACSTGIGIAFGFMPANKAAKLNPIDAL 641



>gi|23475819|ref|ZP_00131093.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Desulfovibrio desulfuricans
           G20]
          Length = 576

 Score =  220 bits (560), Expect = 8e-56
 Identities = 86/315 (27%), Positives = 162/315 (51%), Gaps = 4/315 (1%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M   L + LR+   RR+   +S+ISVIS +G+ALGVA LIV L  MNGF  ++  +IL V
Sbjct: 1   MRFELFVALRYLFARRKQTFISVISVISVLGVALGVASLIVVLGVMNGFTVDMREKILGV 60

Query: 63  VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 122
             H    A     + + E +   + VPG+  A P+I    ++ +   ++ + ++GV+P  
Sbjct: 61  NAHVITLAAGGGISGYPELVRKAETVPGVKGATPFIYSEVMLSTRYGVKGVVLRGVDPVS 120

Query: 123 EQRLSALPSFVQGDAWRNFK-AGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
              +  +   +   +  + + +G   ++IGK +A  L +  G  V+++ P+         
Sbjct: 121 APAVLGIAGRMVDGSLADLERSGAPGLVIGKELAKRLGITVGSRVNLLSPSGEKTSAGFT 180

Query: 182 PKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLVR 239
           P+ +   +AGI      + D S   + L  A+  L M   +VSG+ + + D++ A+ + +
Sbjct: 181 PRILSFKIAGIFSTGMFEYDSSLGFVSLDAARDLLGMPAGTVSGLEIVVDDIYRADTVAQ 240

Query: 240 DAGEVTNS-YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
              +       Y ++W+     ++  +++ +A M + + L++ V  F+IV+TLVM V +K
Sbjct: 241 AVTQALGGYPFYSRNWMEMNANLFAALKLEKAAMSIMLTLIVLVGSFSIVTTLVMLVMEK 300

Query: 299 SGDIAVLRTLGAKDG 313
           S DIA++ ++GA   
Sbjct: 301 SRDIAIMMSMGATKS 315



>gi|7225775|gb|AAF40978.1|   ABC transporter, ATP-binding protein [Neisseria meningitidis MC58]
 gi|11278933|pir||C81187   ABC transporter, ATP-binding protein NMB0549 [imported] - Neisseria
           meningitidis (strain MC58 serogroup B)
 gi|15676455|ref|NP_273594.1|   ABC transporter, ATP-binding protein [Neisseria meningitidis MC58]
          Length = 644

 Score =  219 bits (559), Expect = 9e-56
 Identities = 60/406 (14%), Positives = 152/406 (37%), Gaps = 48/406 (11%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQ---- 79
            + S+++ +GI +G+A ++  ++  NG ++++   I ++  +       + + + +    
Sbjct: 266 KMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRI 325

Query: 80  -----EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQ 134
                +    + K   +A+A P  +  G +          + GV  Q            +
Sbjct: 326 KTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGR 385

Query: 135 GDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQ 194
                + K   Q ++I + V D L             +S+P  K +  ++  L V G+++
Sbjct: 386 LFDENDVKEDAQVVVIDQNVKDKL-----------FADSDPLGKTILFRKRPLTVIGVMK 434

Query: 195 ----LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN---- 246
                 G  D      P       +   S  + I +K+ D  N     +   ++      
Sbjct: 435 KDENAFGNSDVLMLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHG 494

Query: 247 -SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
               ++ +       +      ++ ++    ++ + V    +++ ++++V +++ +I + 
Sbjct: 495 TEDFFMNNSDSIRQIVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIR 554

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
             +GA+ G I   F+   +L  + G L GV +   VSL                      
Sbjct: 555 MAIGARRGNILQQFLIEAVLICVIGGLVGVGLSAAVSLVFN------------------- 595

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
           +F+   P ++  + V   +  +  + +   + PA +A+ ++P   L
Sbjct: 596 HFVTDFPMDISAMSVIGAVACSTGIGIAFGFMPANKAAKLNPIDAL 641



>gi|42522295|ref|NP_967675.1|   Macrolide specific ABC-type transporter, ATP-binding protein
           [Bdellovibrio bacteriovorus HD100]
 gi|39574826|emb|CAE78668.1|   Macrolide specific ABC-type transporter, ATP-binding protein
           [Bdellovibrio bacteriovorus HD100]
          Length = 650

 Score =  219 bits (557), Expect = 1e-55
 Identities = 66/422 (15%), Positives = 156/422 (36%), Gaps = 59/422 (13%)

Query: 21  GMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQ------- 73
               + S +S +GI +GVA ++  L+   G  + +  ++ ++  +  +            
Sbjct: 260 AANKVRSGLSMLGILIGVAAVVGMLALGTGARQSIEKQLSSLGSNLLVLRAGNVRVGGVM 319

Query: 74  -----PWTNWQEALDHVQ-KVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLS 127
                      + +  ++ ++ GI   +P  +  G +         QV GV P  EQ  +
Sbjct: 320 QESGVRIRISLDDVSTIKNQISGIKDVSPSSSGRGQITYLNKNWNTQVMGVAPAYEQMRA 379

Query: 128 ALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRL 187
           + P F +  +    +      +IG  VA  L               +P  ++++  +V  
Sbjct: 380 STPIFGRFFSEEENQRRTLVAVIGTTVAREL-----------FGEKSPIGEMIKINKVNF 428

Query: 188 HVAGIL----QLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGE 243
            V G+L        Q      ++P+  A   L   + V  + +++ D  +  ++     E
Sbjct: 429 RVIGVLPEKGAAGPQDQDDRILVPVVTAMYRLFGRNYVDSVDIEVRDAADIPEVQDSLQE 488

Query: 244 VTN-----------SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLV 292
           + N               + +       +    Q +  ++     + + V    I++ ++
Sbjct: 489 LMNKRHRVPVSSQGDAFNVFNMADIQQALNSTSQTLSMLLASIAAISLVVGGIGIMNIML 548

Query: 293 MAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWI 352
           ++V +++ +I + + +GA+   I   F+   ++  + G L G+ +GV  SL ++ ++ W 
Sbjct: 549 VSVTERTKEIGLRKAIGARRRDILLQFLAESIVVSVCGGLLGIALGVGFSLLISKVLGW- 607

Query: 353 EKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLS 412
                               + +    V      + L+ ++   YPA +AS + P   L 
Sbjct: 608 -------------------STVVSAGSVILSFGFSALIGIVFGSYPASKASKLHPIEALR 648

Query: 413 GQ 414
            +
Sbjct: 649 YE 650



>gi|20091321|ref|NP_617396.1|   hypothetical protein MA2490 [Methanosarcina acetivorans C2A]
 gi|19916449|gb|AAM05876.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 392

 Score =  218 bits (556), Expect = 2e-55
 Identities = 105/415 (25%), Positives = 196/415 (47%), Gaps = 29/415 (6%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M   L I LR    R+      + +++S   IAL V VL V  + M GF  EL N  +  
Sbjct: 4   MRYELFIALRQIWARK------VQTLLSVGAIALAVMVLTVSQAVMVGFTGELYNTTVNK 57

Query: 63  VPHGEIEAVDQP--WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
           +PH  +   +       ++  ++ + K+ G+ A +P++          N    ++KGV P
Sbjct: 58  LPHVSVSPEEGEDYIYLYRTLIEDISKIEGVTAISPFLAGKASFRFKTNSLNAELKGVIP 117

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
            +E  +S++ S +    +R  +     ++IG  +AD L+V  G+ V +  PN+       
Sbjct: 118 LEENEISSIESDMVEGDFRELEFSRNTVVIGSKLADKLEVNLGESVDVSFPNA------- 170

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD 240
             K + L V GI      LD S     L  AQ++ D+   ++GI++++ D     ++  +
Sbjct: 171 --KSLSLRVVGIFHTGSSLDESLTYTSLDTAQEFYDVPDVINGISVRLADFNRDREVAAE 228

Query: 241 AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
             +       +K W  +   + R I +      + + L++ +A F ++STL ++V   + 
Sbjct: 229 IRKT---GYKVKGWTESNPEILRTIAIESTSNNVTLGLIVVIASFGVISTLNLSVISATS 285

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
            I +LR +GA+   IR IF+    + GL G+L G + GV +SL +               
Sbjct: 286 QIGMLRAMGARVSSIRKIFILQSGILGLLGALGGTLTGVAISLAIGQY--------EIPG 337

Query: 361 LSSDIY-FIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            SS++Y  +  +P  +   D+  +++   LL+L+A  YPA++A+ +DP + +S +
Sbjct: 338 ASSELYGGLTTIPIVVRIGDILLIILAVFLLNLIAGIYPAQQAAKLDPVKAISSK 392



>gi|53713160|ref|YP_099152.1|   ABC transporter permease protein [Bacteroides fragilis YCH46]
 gi|60492856|emb|CAH07631.1|   putative permease component of ABC transporter [Bacteroides
           fragilis NCTC 9343]
 gi|60681422|ref|YP_211566.1|   putative permease component of ABC transporter [Bacteroides
           fragilis NCTC 9343]
 gi|52216025|dbj|BAD48618.1|   ABC transporter permease protein [Bacteroides fragilis YCH46]
          Length = 406

 Score =  218 bits (556), Expect = 2e-55
 Identities = 69/442 (15%), Positives = 158/442 (35%), Gaps = 64/442 (14%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M       I LR     +      L + ++ +GI +GVA +I  L+   G ++ +  +I 
Sbjct: 1   MNGTNLFKIALRALNNNK------LRAFLTMLGIIIGVASVITMLAIGQGSKKSIQAQIS 54

Query: 61  AVVPHGEIEAVDQPWT----NWQEALDHVQ---------KVPGIAAAAPYINFTGLVESG 107
            +  +  +                A+  ++         +   +AA +P ++ +G + +G
Sbjct: 55  EMGSNMIMIHPGADMRGGVRQDPSAMQTLKLTDYETLRDETSFLAAVSPNVSSSGQLIAG 114

Query: 108 ANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVS 167
            N     V GV  +  +         +  +  + ++  +  +IGK + D L         
Sbjct: 115 NNNYPSSVNGVGTEYLEIRQLSIDNGEMFSEADIQSSAKVCVIGKTIVDNLFPD------ 168

Query: 168 IMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLD-----HSFAMIPLADAQQYLDMGSSVS 222
                 +P  ++++  ++   V G+L+  G            + P     + L   + + 
Sbjct: 169 ----GEDPVGRIVRFSKIPFRVVGVLKSKGYNSMGMDQDDIVLAPYTTVMKRLLAQTYLQ 224

Query: 223 GIALKMTDVFNANKLVRDA----------GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIM 272
           GI          +    +            E  +    I+S       +     ++  ++
Sbjct: 225 GIYASALSEDMTDNATEEITELLRRNHKLKEADDDDFTIRSQQELSSMLNSTTDLMTTLL 284

Query: 273 YLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSL 332
                + + V    I++ + ++V +++ +I +  ++GA+   I + F+   +L  + G L
Sbjct: 285 ACIAGISLVVGGIGIMNIMYVSVTERTREIGLRMSVGARGVDILSQFLIEAILISITGGL 344

Query: 333 CGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL 392
            GVIIG   S  +  +  W                    P  +    VF       +  +
Sbjct: 345 IGVIIGCGASWVVKSVAHW--------------------PIFIQPWSVFLSFAVCTVTGV 384

Query: 393 LASWYPARRASNIDPARVLSGQ 414
              WYPA++A+++DP   +  +
Sbjct: 385 FFGWYPAKKAADLDPIEAIRYE 406



>gi|24372410|ref|NP_716452.1|   ABC transporter, ATP-binding/permease protein [Shewanella
           oneidensis MR-1]
 gi|24346376|gb|AAN53897.1|   ABC transporter, ATP-binding/permease protein [Shewanella
           oneidensis MR-1]
          Length = 656

 Score =  218 bits (555), Expect = 3e-55
 Identities = 53/409 (12%), Positives = 142/409 (34%), Gaps = 43/409 (10%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQE--- 80
            L + ++ +GI +G+A ++  ++   G +RE+   I ++  +         + + +    
Sbjct: 273 RLRTFLTMLGIIIGIASVVSVVALGEGSQREILKSISSMGTNTIDIRPGLGFGDRRSARV 332

Query: 81  ------ALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQ 134
                   + ++ +P + +  P I+ +  V  G       V GV P+  +      +  Q
Sbjct: 333 RTLTASDANALKNLPYVDSVTPSISSSVTVRLGNKAVTASVNGVGPEFFRVRGYELAQGQ 392

Query: 135 GDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQ 194
                +  A  Q  +I       L               +   +++    + + + G+ +
Sbjct: 393 FWDDDSVDALAQDAVIDDNTRKQLFPD------STGAMGSVIGQVIFLGDLPVRIIGVTK 446

Query: 195 LS----GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN---- 246
                 G  D     +P       +     + GI +++ +   +N   +    +      
Sbjct: 447 PKESAFGNSDALNVWVPYTTVSGRMVGKKYLDGITVRLDESVPSNAAEQGIITLLKMRHG 506

Query: 247 -SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
               +  +       + +    +  ++    V+ + V    +++ ++++V +++ +I V 
Sbjct: 507 TQDFFTINTDTIRQNIEKTTATMTLLISAIAVISLVVGGIGVMNIMLVSVTERTREIGVR 566

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
             +GA+   I   F+   +L  L G   GV +  ++ +         + +          
Sbjct: 567 MAVGARQSDILRQFLIEAVLVCLCGGALGVALAYLIGVVFAQAGGSFQMI---------- 616

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                         +      + L+ +L  + PAR A+ +DP   L+ +
Sbjct: 617 ---------YSTTSIVAAFACSTLIGVLFGFLPARNAARLDPVEALARE 656



>gi|46311285|ref|ZP_00211894.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Burkholderia cepacia R18194]
          Length = 689

 Score =  217 bits (552), Expect = 5e-55
 Identities = 56/406 (13%), Positives = 137/406 (33%), Gaps = 47/406 (11%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEA-- 81
            L ++++ +GI +G+  ++  ++   G +R + + I ++  +         W + +    
Sbjct: 310 RLRTLLTMLGIIIGITSVVSIVAIGEGAKRYMLDEIGSIGTNTINIYPGTDWGDSRADAI 369

Query: 82  -------LDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQ 134
                  +  + + P + +A P  + T L+          V GV  +  Q      +   
Sbjct: 370 QTLVPADVAALTEQPYVDSATPETSRTLLLRYRNVDVNALVSGVGDRFFQARGMRFALGV 429

Query: 135 GDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQ 194
                  +   Q  +I +     L               NP  +++    V   V G+  
Sbjct: 430 AFDEDAVRRQVQVAVIDQNTRRKLF----------GATRNPIGEVILVDNVPCVVIGVTA 479

Query: 195 LSGQLDHS----FAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVY 250
                  S       +P   A   L     +  I +++ D   +    +   ++      
Sbjct: 480 DKKSAFGSVKSLNVWVPYTTASGRLFGQRYLDSITVRVRDGQPSAAAEKSLEKLMTQRHG 539

Query: 251 IKSWIGTY-----GYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
            K +           + +  Q +  ++ L  V+ + V    +++ ++++V +++ +I + 
Sbjct: 540 RKDFFTYNMDSVVKTVEKTGQSLTLLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIR 599

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
             +GA+   I   F+   +L  L G   G+ +   +    +  +   + +          
Sbjct: 600 MAVGARQSDILQQFLVEAVLVCLLGGTIGIALSFGLGALFSMFVAQWKMVF--------- 650

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
                         +    V + L  ++  + PAR AS +DP   L
Sbjct: 651 ----------SAGAIVTAFVCSTLTGVIFGFMPARNASRLDPIDAL 686



>gi|32261866|gb|AAP76915.1|   conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
 gi|32265817|ref|NP_859849.1|   hypothetical protein HH0318 [Helicobacter hepaticus ATCC 51449]
          Length = 417

 Score =  216 bits (549), Expect = 2e-54
 Identities = 91/423 (21%), Positives = 185/423 (43%), Gaps = 22/423 (5%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
           L   +  R+ R  +    +S+ ++++  G+ +GV VL V ++ MNG  +E   ++  +  
Sbjct: 4   LIFYLLPRYLRFDKTQPFISITALLAFFGVGIGVMVLCVAMAIMNGMTKEFERKLSIMNY 63

Query: 65  HGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQ 124
              I +      +    L  ++        +PY+ +  + + G  + A  V GV+ Q E 
Sbjct: 64  PLSIYSTTYEGVD-ANILQALKAHFPQFLFSPYLRYQAVGKIGNTMSAAMVFGVDMQAES 122

Query: 125 RLSAL----------PSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSN 174
           +++A+                    +F   E  I+IGK + +   ++ GD + +      
Sbjct: 123 QINAVVKKAFKTSQNSDTEFKKNIESFMQKEFSILIGKSMEENFGLESGDKLDLFFTQLE 182

Query: 175 PEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSV-SGIALKMTDV- 231
           P      P   R  +AG  +      D ++    L+  Q+   +   +  GI +   +  
Sbjct: 183 PSGFSYTPINKRFSIAGFFESGLRAYDEAYVYTNLSALQKIRHLNEGIYDGIHIYTPNPM 242

Query: 232 FNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTL 291
            + + +             ++ W    G  +  +++ +  +++ ++L+I +A  NI+S+L
Sbjct: 243 QDIHSISDFLNTQFPYRAGVEGWWQQNGNFFSALELEKRALFIVLMLIIVMAALNIISSL 302

Query: 292 VMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEW 351
           +M V ++  +IA+L +LGA    I++IF W G   GL G   G+I+  +    L      
Sbjct: 303 LMVVMNRRKEIALLLSLGASRQEIKSIFFWVGNTIGLSGIALGIILTGIAMYVLDT---- 358

Query: 352 IEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
                    L +D+Y    LP +L  +D    ++ A+ +  L+S+YPAR+AS +D  +VL
Sbjct: 359 ----FPIISLPADVYGSSKLPLDLSLIDFLLTIIGAIFIVCLSSYYPARKASLVDTLQVL 414

Query: 412 SGQ 414
             +
Sbjct: 415 RNE 417



>gi|57240551|ref|ZP_00368500.1|   conserved hypothetical integral membrane protein [Campylobacter
           lari RM2100]
 gi|57018892|gb|EAL55665.1|   conserved hypothetical integral membrane protein [Campylobacter
           lari RM2100]
          Length = 400

 Score =  214 bits (545), Expect = 4e-54
 Identities = 92/416 (22%), Positives = 183/416 (43%), Gaps = 18/416 (4%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M   +   +  ++ R  +    + L  +++ +G+++G+ VL+V ++ MNGF++E   ++ 
Sbjct: 1   MQKSIPRYLLFKYLRFDKDQPFIMLSKILAFLGVSIGLCVLLVAMAIMNGFDKEFERKLF 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            +     I        + +   +   K P +   +PYI    +  +   L    + GVN 
Sbjct: 61  TMNYPITILPRFGASVDDKILQELRIKFPNLL-FSPYIATQVIARNDLKLEGGMLFGVNF 119

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           + E+++    + V   A  N K     I++GKG+ D   +   + ++++  N N     +
Sbjct: 120 EDEKKI----NEVIAQALENKKLDNFDILVGKGLKDEFGLDYNEKITLIFSNLNASGLSL 175

Query: 181 QPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
            P+  R  V           D ++    +    + L     S  G+ +     F   + +
Sbjct: 176 IPQVKRFDVKADFSSGLLAYDKAYMYTDVKALAKILSYPQGSYDGVHVYSNKPF---EDI 232

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +   +   +      W    G  +  + + +  +++ ++L+I VA  NIVS+L+M V ++
Sbjct: 233 KQIEDFLGARYASIGWWEQNGNFFAALALEKRALFIVLMLIILVASLNIVSSLLMIVMNR 292

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
             +IA+L +LGA    I+  F   G L G  G + GVI+          I  W+      
Sbjct: 293 RSEIALLLSLGASKLEIKKTFFSLGFLIGGSGIIAGVILA--------AIALWVLGNFDI 344

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             L SD+Y +  LP EL  +D    L  A+++  L+S+YPA++A+ +D    L  +
Sbjct: 345 ISLPSDVYGMSKLPLELSLVDFCATLFGAIVIVGLSSYYPAKKATQVDILDTLRNE 400



>gi|2313911|gb|AAD07831.1|   conserved hypothetical integral membrane protein [Helicobacter
           pylori 26695]
 gi|7463943|pir||C64618   conserved hypothetical integral membrane protein HP0787 -
           Helicobacter pylori (strain 26695)
 gi|15645406|ref|NP_207580.1|   conserved hypothetical integral membrane protein [Helicobacter
           pylori 26695]
          Length = 410

 Score =  214 bits (545), Expect = 4e-54
 Identities = 85/417 (20%), Positives = 186/417 (44%), Gaps = 13/417 (3%)

Query: 2   AMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
              L   +  R+ R  +    +S+ ++++  G+A+GV VLIV ++ MNG  +E   ++  
Sbjct: 3   NRSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFV 62

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
           +     +     P+   +E +  ++K       +PY+    L++S  ++    V GV+  
Sbjct: 63  MNYPLTLYTTS-PYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFS 121

Query: 122 QEQRLSALPSF-VQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           +E+R++ + +  ++     +       +I+GK +  +L +       +      P    +
Sbjct: 122 KEKRINEVLNDALKNINENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTL 181

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDV-FNANKL 237
            P   R  + G         D S+    L        +      G+ +       +   L
Sbjct: 182 SPIMKRFTIKGDFDSGLKSYDMSYMYAGLQAISAIRRLPLGLYDGVHVYSKTPMKDIEIL 241

Query: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
                 + +  + I+ W    G  +  +++ +  +++ ++L+I +A  NI+S+L+M V +
Sbjct: 242 RNALKTINHHGIGIEGWWQQNGNFFSAMELEKRALFIVLMLIILMASLNIISSLLMVVMN 301

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           +  +IA+L ++G+    I+  F + G + GL G   GV++  +    L+        +  
Sbjct: 302 RRKEIALLFSMGSSQKEIQKTFFYLGNIIGLGGVALGVVLAFLSMYLLS--------VFP 353

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
              L +D+Y I+ LP  L  +D    L+ ++++  L+S+YP+++AS ID   VL  +
Sbjct: 354 IISLPADVYGINTLPLNLSLMDFTLTLIGSVIIVGLSSYYPSKKASTIDALSVLRNE 410



>gi|45441566|ref|NP_993105.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis biovar Medievalis str. 91001]
 gi|45436427|gb|AAS61982.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis biovar Medievalis str. 91001]
          Length = 399

 Score =  213 bits (542), Expect = 9e-54
 Identities = 103/371 (27%), Positives = 186/371 (50%), Gaps = 8/371 (2%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  LI  LS MNGFER L + IL
Sbjct: 1   MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
            ++P   I          +     ++ + G++   P      +++S  NL A  + GV+P
Sbjct: 61  GLMPQALITTPQGSLDPNKIPASTLKSLSGVSDIVPLTTADVVLQSARNLAAGVMLGVDP 120

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKL 179
           QQ +    L +++     +    G   II+G+ +A  L VK+G+ + +M+P+++      
Sbjct: 121 QQHE---PLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177

Query: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG-SSVSGIALKMTDVFNANKLV 238
             P +   ++ G    + ++D    ++   DA + +     +++G  L ++   + + L 
Sbjct: 178 RIPSQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLS 237

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           +            K W    G +++ ++M + +M L + L+I VA FNI+++L + V +K
Sbjct: 238 QQ---SLPEGTVWKDWRDRKGELFQAVRMEKNMMGLLLSLIIAVAAFNIITSLGLLVMEK 294

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
            G++A+L+T G     I  +F+  G  AG+ G+L G  +GV+++ QL  +I  +  LI  
Sbjct: 295 QGEVAILQTQGLSRRQIMLVFMVQGATAGVIGALLGAGLGVLLASQLNTLIPILGVLIDG 354

Query: 359 QFLSSDIYFID 369
             L  +I  + 
Sbjct: 355 ATLPVEIDPLQ 365



>gi|53715757|ref|YP_101749.1|   hypothetical protein BF4478 [Bacteroides fragilis YCH46]
 gi|52218622|dbj|BAD51215.1|   conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 412

 Score =  212 bits (541), Expect = 1e-53
 Identities = 83/411 (20%), Positives = 176/411 (42%), Gaps = 13/411 (3%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M L   I  R+   +++   +++IS IS  G+AL    ++  LS  NGF+  + +     
Sbjct: 1   MNLPFYIARRYLFSKKKHNAINIISAISVCGVALATMAMVCTLSVFNGFQDTVADLFTVF 60

Query: 63  VPHGEIEAVDQPWTNWQE-ALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
            P  ++   +    + Q+  +  ++++P +      +    +V+         +KGV   
Sbjct: 61  DPELKVTIAEGKVFDAQDPRIQAIRQMPEVDVLTETLEENAMVQYKDRQTMAVIKGVQNN 120

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQG--DWVSIMIPNSNPEHKL 179
            EQ  +          +    +     ++G  +   L       D + I IP  + +  +
Sbjct: 121 FEQLTAIDSILYGAGEFLLNDSIVDYGVMGIELVSTLGTGIRFVDPLQIYIPKRSGKVNM 180

Query: 180 MQP----KRVRLHVAGILQLSGQ--LDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFN 233
             P        L+  G++ +  Q   D  + +  L  A++ LD  + VS I LK+    +
Sbjct: 181 ANPAASFNMDYLYSPGVVFVVNQQKYDGQYILTSLDFARRLLDYTTEVSAIELKLKPGSD 240

Query: 234 ANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVM 293
            + +     +       I++       ++R +++ + + YL +  ++ +ACFN++ +L M
Sbjct: 241 LSFVKAKIKKELGDDFVIRNRYEQQEDVFRIMEIEKLVSYLFLTFILVIACFNVIGSLSM 300

Query: 294 AVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIE 353
            + DK  D+  LR LGA D L+  IF++ G +   +G++ G+++G+++            
Sbjct: 301 LILDKKEDVDTLRKLGANDRLVSRIFLFEGCMISFYGAIIGIVLGLLLCWVQMTY----G 356

Query: 354 KLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
            +      ++  + +D  P  +H  DV  + +T   +  L+ WYP R  S 
Sbjct: 357 VISLGGGSAAGNFVVDAYPVSVHLWDVIVIFITVFAVGFLSVWYPVRYLSK 407



>gi|23468969|ref|ZP_00124304.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Pseudomonas syringae pv. syringae B728a]
          Length = 657

 Score =  212 bits (541), Expect = 1e-53
 Identities = 63/426 (14%), Positives = 143/426 (33%), Gaps = 50/426 (11%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
            L   +R +   R   +    + ++ +GI +GVA ++V L+   G +R++  ++ +   +
Sbjct: 265 ELFDAIRAAW--RVMWINRFRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSN 322

Query: 66  GEIEAVDQPWT------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVN 119
                   P           E +  + ++P +    P       V  G    +  V G +
Sbjct: 323 IIYLNGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRYGNLDHSSYVGGND 382

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
                  +         +  + +      +IG  V   L  +Q D V           + 
Sbjct: 383 THFPAIFNWPVVEGSYFSEADEQNAAAVAVIGYKVRQKLFGEQSDPV----------GQY 432

Query: 180 MQPKRVRLHVAGILQLSGQLD-----HSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNA 234
           +  + V   V G+LQ  G         +   IP + A   L        I +   D  N 
Sbjct: 433 ILIENVPFQVVGVLQEKGATSGDLDSDNRIAIPYSSASIRLFGTQDPEYITIATRDANNV 492

Query: 235 NKLVRDAGEVTNS------YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIV 288
            +  +    +            + +         R    +  ++     + + V    ++
Sbjct: 493 KQAEQSIRNLLQQLHHGKQDYELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIGVM 552

Query: 289 STLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPI 348
           + ++M V++++ +I +    GA+   I   F+   ++  + G L G+++ + +   L   
Sbjct: 553 NIMLMTVRERTREIGIRMATGARQSDILRQFLTEAVMLSVVGGLAGIVLALGMGAAL--- 609

Query: 349 IEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPA 408
                              +  +        V      AL+  ++  + PAR+A+ +DP 
Sbjct: 610 ------------------LLSKVAVAFTLPAVAGAFACALITGVIFGFMPARKAARLDPV 651

Query: 409 RVLSGQ 414
             L+ +
Sbjct: 652 AALTSE 657



>gi|12513909|gb|AAG55261.1|   putative ATP-binding component of a transport system [Escherichia
           coli O157:H7 EDL933]
 gi|25307485|pir||A85600   hypothetical protein ybjZ [imported] - Escherichia coli  (strain
           O157:H7, substrain EDL933)
 gi|15800637|ref|NP_286651.1|   putative ATP-binding component of a transport system [Escherichia
           coli O157:H7 EDL933]
          Length = 648

 Score =  212 bits (541), Expect = 1e-53
 Identities = 55/430 (12%), Positives = 154/430 (35%), Gaps = 53/430 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
              +L +  R     +      + ++++ +GI +G+A ++  +   +  ++ +   I ++
Sbjct: 254 FNEALTMAWRALAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSI 307

Query: 63  VPHGEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAI 113
             +       + + +           + L  +QK P +A+A P ++    +       A 
Sbjct: 308 GTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAA 367

Query: 114 QVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNS 173
              GV+           S              Q +++       L   + D V       
Sbjct: 368 SANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVV------- 420

Query: 174 NPEHKLMQPKRVRLHVAGILQLSGQLDHSF----AMIPLADAQQYLDMGSSVSGIALKMT 229
               +++    +   V G+ +    +  S       +P +     +   S ++ I +++ 
Sbjct: 421 ---GEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVK 477

Query: 230 DVFNANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVAC 284
           + F++ +  +    +          +  +  G    + +  + ++  M L  V+ + V  
Sbjct: 478 EGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFMTLVAVISLVVGG 537

Query: 285 FNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQ 344
             +++ ++++V +++ +I +   +GA+   +   F+   +L  L G   G+ + ++++  
Sbjct: 538 IGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFT 597

Query: 345 LTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
           L   +   E                        L +    + + +  +L  W PAR A+ 
Sbjct: 598 LQLFLPGWEIGF-------------------SPLALLLAFLCSTVTGILFGWLPARNAAR 638

Query: 405 IDPARVLSGQ 414
           +DP   L+ +
Sbjct: 639 LDPVDALARE 648



>gi|60280008|gb|AAX16350.1|   PA2390 [Pseudomonas aeruginosa]
          Length = 663

 Score =  212 bits (540), Expect = 1e-53
 Identities = 65/429 (15%), Positives = 147/429 (34%), Gaps = 51/429 (11%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
               LL  +R +   R   +    + ++ +GI +GVA ++V L+   G +R++  ++ A 
Sbjct: 269 WRAELLEAVRAAW--RVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAF 326

Query: 63  VPHGEIEAVDQPWT------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
             +    +   P           + +  +  +P +    P      +V  G       V 
Sbjct: 327 GSNIIYLSGYSPNPRAPMGIVSSDDVAAIATLPQVKKVMPVNGGELVVRYGNIDYHAYVG 386

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           G N    + L+   +       R+  A     +IG  V   L             ++NP 
Sbjct: 387 GNNTDFPEILNWPVAEGSYFTERDEDAATTVAVIGYKVRKKL-----------FGSANPI 435

Query: 177 HKLMQPKRVRLHVAGILQLSGQLD-----HSFAMIPLADAQQYLDMGSSVSGIALKMTDV 231
            + +  + V   V G+L   G         +   IP + A   L    +   + +   D 
Sbjct: 436 GRYILIENVPFQVIGVLAEKGSSSGDKDADNRIAIPYSAASIRLFGTRNPEYVIIAAADA 495

Query: 232 FNANKLVRDAGEVT------NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF 285
              ++  R   ++            + +         +    +  ++     + + V   
Sbjct: 496 QRVHQAERAIDQLMLRLHRGQRDYELTNNAAMIQAEAKTQNTLSLMLGSIAAISLLVGGI 555

Query: 286 NIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQL 345
            +++ ++M V++++ +I +    GA+ G I   F+    +  + G L G+ + + +    
Sbjct: 556 GVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVGGLAGIALALCIG--- 612

Query: 346 TPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNI 405
                              +  +  +        +      AL+  L+  + PAR+A+ +
Sbjct: 613 ------------------GVLLLGQVAVAFSLSAIVGAFSCALVTGLVFGFMPARKAAQL 654

Query: 406 DPARVLSGQ 414
           DP   L+ Q
Sbjct: 655 DPVAALASQ 663



>gi|60279990|gb|AAX16333.1|   PA2390 [Pseudomonas aeruginosa]
          Length = 663

 Score =  212 bits (539), Expect = 2e-53
 Identities = 65/429 (15%), Positives = 147/429 (34%), Gaps = 51/429 (11%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
               LL  +R +   R   +    + ++ +GI +GVA ++V L+   G +R++  ++ A 
Sbjct: 269 WRAELLEAVRAAW--RVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAF 326

Query: 63  VPHGEIEAVDQPWT------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
             +    +   P           + +  +  +P +    P      +V  G       V 
Sbjct: 327 GSNIIYLSGYSPNPRAPMGIVSSDDVAAIATLPQVKKVMPVNGGELVVRYGNIDYHAYVG 386

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           G N    + L+   +       R+  A     +IG  V   L             ++NP 
Sbjct: 387 GNNTDFPEILNWPVAEGSYFTERDEDAATTVAVIGYKVRKKL-----------FGSANPI 435

Query: 177 HKLMQPKRVRLHVAGILQLSGQLD-----HSFAMIPLADAQQYLDMGSSVSGIALKMTDV 231
            + +  + V   V G+L   G         +   IP + A   L    +   + +   D 
Sbjct: 436 GRYILIENVPFQVIGVLAEKGSSSGDKDADNRIAIPYSAASIRLFGTRNPEYVIIAAADA 495

Query: 232 FNANKLVRDAGEVT------NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF 285
              ++  R   ++            + +         +    +  ++     + + V   
Sbjct: 496 QRVHQAERAIDQLMLRLHRGQRDYELTNNAAMIQAEAKTQNTLSLMLGSIAAISLLVGGI 555

Query: 286 NIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQL 345
            +++ ++M V++++ +I +    GA+ G I   F+    +  + G L G+ + + +    
Sbjct: 556 GVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVGGLAGIALALCIG--- 612

Query: 346 TPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNI 405
                              +  +  +        +      AL+  L+  + PAR+A+ +
Sbjct: 613 ------------------GVLLLGQVAVAFSLSAIVGAFSCALVTGLVFGFMPARKAAQL 654

Query: 406 DPARVLSGQ 414
           DP   L+ Q
Sbjct: 655 DPVAALASQ 663



>gi|13360424|dbj|BAB34388.1|   putative ATP-binding component of a transport system [Escherichia
           coli O157:H7]
 gi|25307482|pir||E90749   hypothetical protein ECs0965 [imported] - Escherichia coli  (strain
           O157:H7, substrain RIMD 0509952)
 gi|15830219|ref|NP_308992.1|   putative ATP-binding component of a transport system [Escherichia
           coli O157:H7]
          Length = 648

 Score =  212 bits (539), Expect = 2e-53
 Identities = 55/430 (12%), Positives = 154/430 (35%), Gaps = 53/430 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
              +L +  R     +      + ++++ +GI +G+A ++  +   +  ++ +   I ++
Sbjct: 254 FNEALTMAWRALAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSI 307

Query: 63  VPHGEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAI 113
             +       + + +           + L  +QK P +A+A P ++    +       A 
Sbjct: 308 GTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAA 367

Query: 114 QVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNS 173
              GV+           S              Q +++       L   + D V       
Sbjct: 368 SANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVV------- 420

Query: 174 NPEHKLMQPKRVRLHVAGILQLSGQLDHSF----AMIPLADAQQYLDMGSSVSGIALKMT 229
               +++    +   V G+ +    +  S       +P +     +   S ++ I +++ 
Sbjct: 421 ---GEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVK 477

Query: 230 DVFNANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVAC 284
           + F++ +  +    +          +  +  G    + +  + ++  M L  V+ + V  
Sbjct: 478 EGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFMTLVAVISLVVGG 537

Query: 285 FNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQ 344
             +++ ++++V +++ +I +   +GA+   +   F+   +L  L G   G+ + ++++  
Sbjct: 538 IGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFT 597

Query: 345 LTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
           L   +   E                        L +    + + +  +L  W PAR A+ 
Sbjct: 598 LQLFLPGWEIGF-------------------SPLALLLAFLCSTVTGILFGWLPARNAAR 638

Query: 405 IDPARVLSGQ 414
           +DP   L+ +
Sbjct: 639 LDPVDALARE 648



>gi|60279959|gb|AAX16304.1|   PA2390 [Pseudomonas aeruginosa]
 gi|32042528|ref|ZP_00140111.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 663

 Score =  212 bits (539), Expect = 2e-53
 Identities = 65/429 (15%), Positives = 147/429 (34%), Gaps = 51/429 (11%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
               LL  +R +   R   +    + ++ +GI +GVA ++V L+   G +R++  ++ A 
Sbjct: 269 WRAELLEAVRAAW--RVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAF 326

Query: 63  VPHGEIEAVDQPWT------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
             +    +   P           + +  +  +P +    P      +V  G       V 
Sbjct: 327 GSNIIYLSGYSPNPRAPMGIVSSDDVAAIATLPQVKKVMPVNGGELVVRYGNIDYHAYVG 386

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           G N    + L+   +       R+  A     +IG  V   L             ++NP 
Sbjct: 387 GNNTDFPEILNWPVAEGSYFTERDEDAATTVAVIGYKVRKKL-----------FGSANPI 435

Query: 177 HKLMQPKRVRLHVAGILQLSGQLD-----HSFAMIPLADAQQYLDMGSSVSGIALKMTDV 231
            + +  + V   V G+L   G         +   IP + A   L    +   + +   D 
Sbjct: 436 GRYILIENVPFQVIGVLAEKGSSSGDKDADNRIAIPYSAASIRLFGTRNPEYVIIAAADA 495

Query: 232 FNANKLVRDAGEVT------NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF 285
              ++  R   ++            + +         +    +  ++     + + V   
Sbjct: 496 QRVHQAERAIDQLMLRLHRGQRDYELTNNAAMIQAEAKTQNTLSLMLGSIAAISLLVGGI 555

Query: 286 NIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQL 345
            +++ ++M V++++ +I +    GA+ G I   F+    +  + G L G+ + + +    
Sbjct: 556 GVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVGGLAGIALALCIG--- 612

Query: 346 TPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNI 405
                              +  +  +        +      AL+  L+  + PAR+A+ +
Sbjct: 613 ------------------GVLLLGQVAVAFSLSAIVGAFSCALVTGLVFGFMPARKAAQL 654

Query: 406 DPARVLSGQ 414
           DP   L+ Q
Sbjct: 655 DPVAALASQ 663



>gi|9948431|gb|AAG05778.1|   probable ATP-binding/permease fusion ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|11351064|pir||H83346   probable ATP-binding/permease fusion ABC transporter PA2390
           [imported] - Pseudomonas aeruginosa (strain PAO1)
 gi|15597586|ref|NP_251080.1|   probable ATP-binding/permease fusion ABC transporter [Pseudomonas
           aeruginosa PAO1]
          Length = 663

 Score =  212 bits (539), Expect = 2e-53
 Identities = 65/429 (15%), Positives = 147/429 (34%), Gaps = 51/429 (11%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
               LL  +R +   R   +    + ++ +GI +GVA ++V L+   G +R++  ++ A 
Sbjct: 269 WRAELLEAVRAAW--RVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAF 326

Query: 63  VPHGEIEAVDQPWT------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
             +    +   P           + +  +  +P +    P      +V  G       V 
Sbjct: 327 GSNIIYLSGYSPNPRAPMGIVSSDDVAAIATLPQVKKVMPVNGGELVVRYGNIDYHAYVG 386

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           G N    + L+   +       R+  A     +IG  V   L             ++NP 
Sbjct: 387 GNNTDFPEILNWPVAEGSYFTERDEDAATTVAVIGYKVRKKL-----------FGSANPI 435

Query: 177 HKLMQPKRVRLHVAGILQLSGQLD-----HSFAMIPLADAQQYLDMGSSVSGIALKMTDV 231
            + +  + V   V G+L   G         +   IP + A   L    +   + +   D 
Sbjct: 436 GRYILIENVPFQVIGVLAEKGSSSGDKDADNRIAIPYSAASIRLFGTRNPEYVIIAAADA 495

Query: 232 FNANKLVRDAGEVT------NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF 285
              ++  R   ++            + +         +    +  ++     + + V   
Sbjct: 496 QRVHQAERAIDQLMLRLHRGQRDYELTNNAAMIQAEAKTQNTLSLMLGSIAAISLLVGGI 555

Query: 286 NIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQL 345
            +++ ++M V++++ +I +    GA+ G I   F+    +  + G L G+ + + +    
Sbjct: 556 GVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVGGLAGIALALCIG--- 612

Query: 346 TPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNI 405
                              +  +  +        +      AL+  L+  + PAR+A+ +
Sbjct: 613 ------------------GVLLLGQVAVAFSLSAIVGAFSCALVTGLVFGFMPARKAAQL 654

Query: 406 DPARVLSGQ 414
           DP   L+ Q
Sbjct: 655 DPVAALASQ 663



>gi|21672564|ref|NP_660631.1|   hypothetical 45.3 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|21623191|gb|AAM67842.1|   hypothetical 45.3 kD protein in mfd-cobB [Buchnera aphidicola str.
           Sg (Schizaphis graminum)]
 gi|25091614|sp|Q8K9N7|Y286_BUCAP   Hypothetical protein BUsg286
          Length = 413

 Score =  211 bits (538), Expect = 3e-53
 Identities = 106/408 (25%), Positives = 221/408 (54%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
           L  LI  R      +   V L+S++S IGI++ +  LI+  SA+NGF+  +   IL+ +P
Sbjct: 4   LPFLIAKRLYHRNNKNHAVLLVSILSKIGISISIFTLILSFSALNGFQILIKKNILSSLP 63

Query: 65  HGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQ 124
           HG IE  +     W++    ++ +P +  + PY+    ++     +R I +K     +  
Sbjct: 64  HGIIELTNTSAFTWKDITKKLESLPEVIYSEPYVLMNSVLLKNDKMRFINIKSFKNIKYI 123

Query: 125 RLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKR 184
           +          +  +  K    +III   +A    +K+GD ++++I N        Q + 
Sbjct: 124 KKYFSFQKKLYNFSKLKKIYNNEIIISSDLAKYFSLKEGDCINLIILNKKISFDKTQIQS 183

Query: 185 VRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEV 244
               V  I   +G  + +  +IP    Q++ ++ ++++ I L M+D F A+K++    + 
Sbjct: 184 FSFKVKSIFHSNGISNSNIGLIPFIFFQKFFNIKNNINKIELYMSDPFQADKIILKIAKK 243

Query: 245 TNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAV 304
             + ++  +W+ +Y Y+Y DI++I+ I+Y+ + L+I ++CF+++S  + ++  K+ DIA+
Sbjct: 244 IKTPLFFYNWMYSYKYIYHDIKIIKTIIYVTLFLIIIISCFSVISICLTSISKKTKDIAI 303

Query: 305 LRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSD 364
           LR++GA + LI+ IF +YG+   + G+L G++ G++  L    I+ ++EK     +   +
Sbjct: 304 LRSIGANNILIQLIFFYYGMRFIIIGNLIGLLTGIITVLNFKKIMFFLEKHFEENWFLKN 363

Query: 365 IYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLS 412
           +Y+ +FL  ++++ D+  + ++ L + ++A+WYP   AS I+P ++L 
Sbjct: 364 VYYKNFLLLQINFFDLIIIFISTLTIGIVANWYPIYYASKINPNKILK 411



>gi|42522999|ref|NP_968379.1|   Lipoprotein releasing system transmembrane protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39575204|emb|CAE79372.1|   Lipoprotein releasing system transmembrane protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 405

 Score =  211 bits (537), Expect = 3e-53
 Identities = 93/411 (22%), Positives = 191/411 (46%), Gaps = 12/411 (2%)

Query: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 67
            +  R    R+     S  + ++ +G+ LGVA L+  ++ M+GFE  L   +  V  H +
Sbjct: 3   WLSWRLLFSRKTMFGGS--APLALLGLVLGVAALVASMAVMSGFENTLKTAMAEVSGHAQ 60

Query: 68  IEAVDQPWTNWQEALDHVQK-VPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRL 126
           +    +   +W+E  + ++K  P +   + ++    ++ +   +  + ++GV+ Q+   +
Sbjct: 61  VVKRSRFPDDWKELEERIRKAEPTLVNTSRFVFIEAVLANKGQISGVLIQGVDTQRVNEV 120

Query: 127 -SALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRV 185
            +     + G    N  +     ++GK +A  + +  GD   +++P ++        +RV
Sbjct: 121 LNFKRRVLSGTDDLNVASDVPLALVGKNLAKKMNLNVGDTFRVVVPVADSVDPSKFQRRV 180

Query: 186 R-LHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGE 243
               V GIL L     +  F +  L   Q   D+G   SG+ LK  DV +A     +   
Sbjct: 181 GAFKVQGILDLGKHDWNERFILSDLKATQDLADIGDRYSGLLLKFQDVDHARDAAFNLSA 240

Query: 244 VTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIA 303
           V  S  +++ W      ++  I + R  ++  ++++  VA FN+ +TL + V  +  DIA
Sbjct: 241 VLGSPYWVRDWRDANENLFEAINVERPGIFFVVLVITIVAAFNVSATLFVNVVRRFKDIA 300

Query: 304 VLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSS 363
           +L+T+G     I  IFV  GL  GL G + G  +GV ++     +   +        +S 
Sbjct: 301 ILKTVGLSQKDIMKIFVCQGLFMGLVGIVLGFALGVGIAYLFEFMQGRLS------LISG 354

Query: 364 DIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           ++Y ++ +  ++ ++D   + V  L++ L+A+  PARR + ++P   L  +
Sbjct: 355 EVYRLENIELQIRFVDGVAICVATLVICLIATIAPARRGAKLEPVEGLRSE 405



>gi|28900079|ref|NP_799734.1|   putative ABC transporter, ATP-binding protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|28808362|dbj|BAC61567.1|   putative ABC transporter, ATP-binding protein [Vibrio
           parahaemolyticus RIMD 2210633]
          Length = 654

 Score =  211 bits (537), Expect = 3e-53
 Identities = 47/406 (11%), Positives = 147/406 (36%), Gaps = 48/406 (11%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQ---- 79
            + + ++ +GI +G+A ++  ++  NG ++++ + I ++  +       + + + +    
Sbjct: 276 RMRTFLTMLGIIIGIASVVSVVALGNGSQQQILSNISSMGTNTIDVRPGKGFGDRRSGRV 335

Query: 80  -----EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQ 134
                +    ++ +P + +  P ++ +  V          V+GV     +      +  Q
Sbjct: 336 KTLTADDAKSLESLPFVDSVTPSLSNSLTVRYANQDATASVEGVGEDYFRVRGYEIAKGQ 395

Query: 135 GDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQ 194
                +  +  Q+ +I                  M  + NP  +++    + + + G+ Q
Sbjct: 396 FWDEESVNSLAQEAVIDDNTRKE-----------MFADRNPIGEVIFLGSLPVRIVGVTQ 444

Query: 195 LS----GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN---- 246
                 G  D     +P       +     ++GI +++ +   +  + +    +      
Sbjct: 445 KKEDAFGNSDALKIWVPYTTMSGRMMGQRYLNGITVRIDENAPSAAVEQSIINLLKMRHG 504

Query: 247 -SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
               +  +       + +    +  ++    V+ + V    +++ ++++V +++ +I V 
Sbjct: 505 TEDFFTINTDTIRQSIEKTTATMTLLISAIAVISLIVGGIGVMNIMLVSVTERTKEIGVR 564

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
             +GA+   I   F+   +L  L G + G+ +  ++    +      + +          
Sbjct: 565 MAVGARQADILRQFLIEAVLVCLCGGIAGIGLAFLIGFAFSTSGSSFQMI---------- 614

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
                         + +  + + L+ +   + PAR A+ +DP   L
Sbjct: 615 ---------YSMNSIIWAFICSTLIGIAFGFLPARNAAKLDPIEAL 651



>gi|16128847|ref|NP_415400.1|   macrolide transport protein (ABC superfamily, atp_bind
           (N-terminal), membrane (C-terminal)) [Escherichia coli
           K12]
 gi|1787105|gb|AAC73966.1|   macrolide-specific ABC-type efflux carrier; macrolide transport
           protein (ABC superfamily, atp_bind (N-terminal),
           membrane (C-terminal)) [Escherichia coli K12]
 gi|4062463|dbj|BAA35598.1|   ABC transporter probable ATP-binding subunit homolog [Escherichia
           coli K12]
 gi|7430353|pir||G64826   probable ABC transporter ybjZ - Escherichia coli (strain K-12)
 gi|15487341|dbj|BAB64542.1|   macrolide-specific ABC-type efflux carrier [Escherichia coli]
 gi|2829633|sp|P75831|MACB_ECOLI   Macrolide-specific ABC-type efflux carrier
          Length = 648

 Score =  211 bits (537), Expect = 3e-53
 Identities = 54/430 (12%), Positives = 154/430 (35%), Gaps = 53/430 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
              +L +  R     +      + ++++ +GI +G+A ++  +   +  ++ +   I ++
Sbjct: 254 FNEALTMAWRALAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSI 307

Query: 63  VPHGEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAI 113
             +       + + +           + L  +QK P +A+A P ++    +       A 
Sbjct: 308 GTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAA 367

Query: 114 QVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNS 173
              GV+           S              Q +++       L   + D V       
Sbjct: 368 SANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVV------- 420

Query: 174 NPEHKLMQPKRVRLHVAGILQLSGQLDHSF----AMIPLADAQQYLDMGSSVSGIALKMT 229
               +++    +   V G+ +    +  S       +P +     +   S ++ I +++ 
Sbjct: 421 ---GEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVK 477

Query: 230 DVFNANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVAC 284
           + F++ +  +    +          +  +  G    + +  + ++  + L  V+ + V  
Sbjct: 478 EGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGG 537

Query: 285 FNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQ 344
             +++ ++++V +++ +I +   +GA+   +   F+   +L  L G   G+ + ++++  
Sbjct: 538 IGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFT 597

Query: 345 LTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
           L   +   E                        L +    + + +  +L  W PAR A+ 
Sbjct: 598 LQLFLPGWEIGF-------------------SPLALLLAFLCSTVTGILFGWLPARNAAR 638

Query: 405 IDPARVLSGQ 414
           +DP   L+ +
Sbjct: 639 LDPVDALARE 648



>gi|60495122|emb|CAH09943.1|   putative lipoprotein releasing system transmembrane protein
           [Bacteroides fragilis NCTC 9343]
 gi|60683688|ref|YP_213832.1|   putative lipoprotein releasing system transmembrane protein
           [Bacteroides fragilis NCTC 9343]
          Length = 412

 Score =  211 bits (536), Expect = 4e-53
 Identities = 83/411 (20%), Positives = 175/411 (42%), Gaps = 13/411 (3%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M L   I  R+   +++   +++IS IS  G+AL    ++  LS  NGF+  + +     
Sbjct: 1   MNLPFYIARRYLFSKKKHNAINIISAISVCGVALATMAMVCTLSVFNGFQDTVADLFTVF 60

Query: 63  VPHGEIEAVDQPWTNWQE-ALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
            P  ++   +    + Q   +  ++++P +      +    +V+         +KGV   
Sbjct: 61  DPELKVTIAEGKVFDAQAPRIQAIRQMPEVDVLTETLEENAMVQYKDRQTMAVIKGVQNN 120

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQG--DWVSIMIPNSNPEHKL 179
            EQ  +          +    +     ++G  +   L       D + I IP  + +  +
Sbjct: 121 FEQLTAIDSILYGAGEFLLNDSIVDYGVMGIELVSTLGTGIRFVDPLQIYIPKRSGKVNM 180

Query: 180 MQP----KRVRLHVAGILQLSGQ--LDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFN 233
             P        L+  G++ +  Q   D  + +  L  A++ LD  + VS I LK+    +
Sbjct: 181 ANPAASFNMDYLYSPGVVFVVNQQKYDGQYILTSLDFARRLLDYTTEVSAIELKLKPGSD 240

Query: 234 ANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVM 293
            + +     +       I++       ++R +++ + + YL +  ++ +ACFN++ +L M
Sbjct: 241 LSFVKAKIKKELGDDFVIRNRYEQQEDVFRIMEIEKLVSYLFLTFILVIACFNVIGSLSM 300

Query: 294 AVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIE 353
            + DK  D+  LR LGA D L+  IF++ G +   +G++ G+++G+++            
Sbjct: 301 LILDKKEDVDTLRKLGANDRLVSRIFLFEGCMISFYGAIIGIVLGLLLCWVQMTY----G 356

Query: 354 KLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
            +      ++  + +D  P  +H  DV  + +T   +  L+ WYP R  S 
Sbjct: 357 IISLGGGSAAGNFVVDAYPVSVHLWDVIVIFITVFAVGFLSVWYPVRYLSK 407



>gi|28870017|ref|NP_792636.1|   macrolide ABC efflux protein MacB [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28853263|gb|AAO56331.1|   macrolide ABC efflux protein MacB [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 668

 Score =  211 bits (536), Expect = 4e-53
 Identities = 54/427 (12%), Positives = 150/427 (35%), Gaps = 53/427 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
              +  +        R      + ++++ +GI +G+  ++   +   G +R +   I ++
Sbjct: 274 FREAFNMAWIALISHR------MRTLLTMLGIIIGITSVVSISAIGEGAKRYVLKDIQSI 327

Query: 63  VPHGEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAI 113
             +         + + +           +  + ++  I +A P +  + LV         
Sbjct: 328 GSNTIDIYAGANFGDSRAKSIETLLPSDVAALNQLYYIDSATPVVGRSMLVRYRNVDVDA 387

Query: 114 QVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNS 173
           Q+ GV+ +  Q  +   +     + ++ +   Q +++    A  L            P  
Sbjct: 388 QLNGVSSRYFQVRNIQLAAGITFSDQDARRQAQVVVLDHNTAQRLF----------GPGV 437

Query: 174 NPEHKLMQPKRVRLHVAGILQLSGQLD----HSFAMIPLADAQQYLDMGSSVSGIALKMT 229
           NP  +++   ++   V G+      L          +P   A   +     +  I++++ 
Sbjct: 438 NPLGQVILVGKLPCTVIGVTSDHKNLFIAGNTLNLWMPYETAAGRVLGQRHLDSISVRVK 497

Query: 230 DVFNANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVAC 284
           D   +  +      +          +  +       + +  + +  ++ L  V+ + V  
Sbjct: 498 DGMPSKAVEEQIKALMLQRHGTKDFFTNNLDSVMQTVQKTSRSLTLLLSLIAVISLVVGG 557

Query: 285 FNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQ 344
             +++ ++++V +++ +I +   +GA+   IR  F+   ++  L G + G+ +   +   
Sbjct: 558 IGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLMGGVIGIGLSYAIGYL 617

Query: 345 LTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
            T  ++  E +                        V      + L+ +L  + PAR A+ 
Sbjct: 618 FTLFVQQWEMVF-------------------SLASVVTAFACSTLIGVLFGFVPARNAAR 658

Query: 405 IDPARVL 411
           +DP   L
Sbjct: 659 LDPIEAL 665



>gi|29338522|gb|AAO76322.1|   ABC transporter, permease protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29346625|ref|NP_810128.1|   ABC transporter, permease protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 406

 Score =  211 bits (536), Expect = 5e-53
 Identities = 68/442 (15%), Positives = 156/442 (35%), Gaps = 64/442 (14%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M       I LR     +      L + ++ +GI +GVA +I  L+   G +R +  +I 
Sbjct: 1   MNGTNLFKIALRALANNK------LRAFLTMLGIIIGVASVITMLAIGQGSKRSIQQQIS 54

Query: 61  AVVPHGEIEAVD----QPWTNWQEALDHVQ---------KVPGIAAAAPYINFTGLVESG 107
            +  +  +                A+  ++         +   ++A +P ++ +G + +G
Sbjct: 55  EMGSNMIMIHPGADRRGGVRQDPSAMQTLKLTDYEALRDETNFLSAISPNVSSSGQLIAG 114

Query: 108 ANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVS 167
            N     V GV  +                  + ++  +  +IGK + D L     D + 
Sbjct: 115 NNNYPSSVSGVGLEYLDIRQLSVESGDMFTEADIQSSAKVCVIGKTIVDNLFPDGSDPI- 173

Query: 168 IMIPNSNPEHKLMQPKRVRLHVAGILQLSG-----QLDHSFAMIPLADAQQYLDMGSSVS 222
                     K+++  ++   V G+L+  G     Q   +  + P     + L   + + 
Sbjct: 174 ---------GKIIRFNKIPFRVVGVLKAKGYNSMGQDQDNIVLAPYTTVMKRLLAVTYLQ 224

Query: 223 GIALKMTDVFNANKLVRDAGEVTN----------SYVYIKSWIGTYGYMYRDIQMIRAIM 272
           G+               +  E+                I++       +     ++  ++
Sbjct: 225 GVFASALSEDMTEYATDEITEILRRNHKLKASDEDDFTIRTQQELSTMLNSTTDLMTTLL 284

Query: 273 YLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSL 332
                + + V    I++ + ++V +++ +I +  ++GA+   I + F+   ++  + G L
Sbjct: 285 ACIAGISLVVGGIGIMNIMYVSVTERTREIGLRMSVGARGVDILSQFLIEAIMISITGGL 344

Query: 333 CGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL 392
            GVIIG   S  +  +  W                    P  +    VF       +  +
Sbjct: 345 IGVIIGCGASWIVKSVAHW--------------------PIFIQPWSVFLSFAVCTVTGV 384

Query: 393 LASWYPARRASNIDPARVLSGQ 414
              WYPA++A+++DP   +  +
Sbjct: 385 FFGWYPAKKAADLDPIEAIRYE 406



>gi|24112255|ref|NP_706765.1|   putative ATP-binding component of a transport system [Shigella
           flexneri 2a str. 301]
 gi|24051105|gb|AAN42472.1|   putative ATP-binding component of a transport system [Shigella
           flexneri 2a str. 301]
 gi|30062367|ref|NP_836538.1|   putative ATP-binding component of a transport system [Shigella
           flexneri 2a str. 2457T]
 gi|30040612|gb|AAP16344.1|   putative ATP-binding component of a transport system [Shigella
           flexneri 2a str. 2457T]
          Length = 648

 Score =  210 bits (535), Expect = 6e-53
 Identities = 54/430 (12%), Positives = 153/430 (35%), Gaps = 53/430 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
              +L +  R     +      + ++++ +GI +G+A ++  +   +  ++ +   I ++
Sbjct: 254 FNEALTMAWRALAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSI 307

Query: 63  VPHGEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAI 113
             +       + + +           + L  +QK P +A+A P ++    +       A 
Sbjct: 308 GTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAA 367

Query: 114 QVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNS 173
              GV+           S              Q +++       L   + D V       
Sbjct: 368 SANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVV------- 420

Query: 174 NPEHKLMQPKRVRLHVAGILQLSGQLDHSF----AMIPLADAQQYLDMGSSVSGIALKMT 229
               +++    +   V G+ +    +  S       +P +     +   S ++ I +++ 
Sbjct: 421 ---GEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVK 477

Query: 230 DVFNANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVAC 284
           + F++ +  +    +          +  +  G    + +  + ++  + L  V+ + V  
Sbjct: 478 EGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGG 537

Query: 285 FNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQ 344
             +++ ++++V +++ +I +   +GA+   +   F+   +L  L G   G+ + ++++  
Sbjct: 538 IGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFT 597

Query: 345 LTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
           L   +   E                        L +    + +    +L  W PAR A+ 
Sbjct: 598 LQLFLPGWEIGF-------------------SPLALLLAFLCSTATGILFGWLPARNAAR 638

Query: 405 IDPARVLSGQ 414
           +DP   L+ +
Sbjct: 639 LDPVDALARE 648



>gi|45441056|ref|NP_992595.1|   putative ABC transporter ATP-binding protein [Yersinia pestis
           biovar Medievalis str. 91001]
 gi|45435915|gb|AAS61472.1|   putative ABC transporter ATP-binding protein [Yersinia pestis
           biovar Medievalis str. 91001]
          Length = 649

 Score =  209 bits (532), Expect = 1e-52
 Identities = 49/420 (11%), Positives = 146/420 (34%), Gaps = 47/420 (11%)

Query: 13  FSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVD 72
                R      + + ++ +GI +G+A ++  L   +  ++ +   I A+  +       
Sbjct: 259 LLMAWRAMSANKMRTALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTNTIDIYPG 318

Query: 73  QPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQE 123
           + + +           + +  ++    ++A +P I  +  +  G    A  V GV+ +  
Sbjct: 319 KDFGDDDPSTRQALVHDDMAALKAQSYVSAVSPSIGGSMRLRFGNIDVAASVLGVSDEYF 378

Query: 124 QRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPK 183
           +                 +     ++I       L     D V           +++   
Sbjct: 379 RVFGMAMEQGAPITREQVERQAPTVVIDLNTQRRLFPHMKDVV----------GQVILVG 428

Query: 184 RVRLHVAGILQLSGQLDHSF----AMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            +   V G++     +  S       +P +     L   S    I +++ + +++ +  +
Sbjct: 429 NMPATVVGVVAEKKSMFGSNKALRVWVPYSTMANRLMGRSYFDSITIRIKEGYSSKEAEQ 488

Query: 240 DAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMA 294
               +         ++  +         +  Q ++  + L  V+ + V    +++ ++++
Sbjct: 489 QLVRLLTLRHGKKDIFTYNMDSLLQTAEKTTQTMQLFLTLVAVISLVVGGIGVMNIMLVS 548

Query: 295 VKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEK 354
           V +++ +I +   +GA+   +   F+   +L  L G   G+ +   + L +         
Sbjct: 549 VTERTREIGIRMAVGARSSDVMQQFLIEAVLVCLIGGALGISLSFAIGLIVE-------- 600

Query: 355 LIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       F+         + +F   + + ++ ++  + PAR A+ ++P   L+ +
Sbjct: 601 -----------MFLPNWRIAFPPMALFSAFLCSTVIGVVFGYLPARSAARLNPIDALARE 649



>gi|15669701|ref|NP_248514.1|   hypothetical protein MJ1507 [Methanocaldococcus jannaschii DSM
           2661]
 gi|1592141|gb|AAB99519.1|   hypothetical protein MJ1507 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2128904|pir||B64488   hypothetical protein MJ1507 - Methanococcus jannaschii
 gi|2496185|sp|Q58902|YF07_METJA   Hypothetical protein MJ1507
          Length = 399

 Score =  209 bits (532), Expect = 1e-52
 Identities = 65/429 (15%), Positives = 167/429 (38%), Gaps = 49/429 (11%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M +   +    +  + +R        S+++ IGI +GV  ++  +S   G +  ++  ++
Sbjct: 5   MKVDDIITFAFKNIKQKRTQ------SLLTIIGIVIGVLAMVSLISLGYGVQNYIHEEMM 58

Query: 61  AVVPHGEIEAVDQPWT------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQ 114
            +  +       + +         ++ +  ++ V G+            +E     + + 
Sbjct: 59  KMGSNKITILPMKQFGVPPSHLFTKKEIKAIKNVKGVDTVMYGWYGGCEIEYNGEKKFVS 118

Query: 115 VKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALK---VKQGDWVSIMIP 171
                P + + +     +   +        +   +IG G A  L    +K GD + I   
Sbjct: 119 YYYAIPSKLREVYKDSGYDIEEGRWLEDNDKYACVIGYGTAHNLFDREIKVGDVIKI--- 175

Query: 172 NSNPEHKLMQPKRVRLHVAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTD 230
                      K  +  V GIL+ +  Q D +  ++ +   ++        + I++ + +
Sbjct: 176 -----------KDKKFRVVGILKQIGNQQDDNSIILNIDVGEKLFGNEGKYNFISVTVKE 224

Query: 231 VFNANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF 285
             +  K+  +  +       +    + +       +   + +I   +     + + V   
Sbjct: 225 GEDIEKVSEEIKKALKKSFGDEDFSVLTAEQLAKTVSSVLGVITIFVVGVAAISLLVGAV 284

Query: 286 NIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQL 345
            I +T+ M++ ++  DI +L+ LGA+   I AIFV      GLFG + G+++G++++  +
Sbjct: 285 GISNTMHMSILERRKDIGILKALGAETTDILAIFVVESGFLGLFGGIVGLVLGILLAEVI 344

Query: 346 TPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNI 405
             +   +  L               + + + W  +  VL+ + L+ +++ ++PAR  + +
Sbjct: 345 EALAHKMGYL--------------MVNAWISWELIVGVLIFSFLVGVISGYFPARSGAKL 390

Query: 406 DPARVLSGQ 414
           +P   L G+
Sbjct: 391 NPIETLRGE 399



>gi|51595731|ref|YP_069922.1|   putative ABC transporter with fused permease and ATP-binding
           domains [Yersinia pseudotuberculosis IP 32953]
 gi|22126690|ref|NP_670113.1|   putative ATP-binding component of ABC transport system [Yersinia
           pestis KIM]
 gi|21959707|gb|AAM86364.1|   putative ATP-binding component of ABC transport system [Yersinia
           pestis KIM]
 gi|16121645|ref|NP_404958.1|   putative ABC transporter ATP-binding protein [Yersinia pestis CO92]
 gi|15979414|emb|CAC90194.1|   putative ABC transporter ATP-binding protein [Yersinia pestis CO92]
 gi|51589013|emb|CAH20631.1|   putative ABC transporter with fused permease and ATP-binding
           domains [Yersinia pseudotuberculosis IP 32953]
 gi|25307487|pir||AG0166   probable ABC transporter ATP-binding protein YPO1365 [imported] -
           Yersinia pestis (strain CO92)
          Length = 649

 Score =  209 bits (532), Expect = 1e-52
 Identities = 50/420 (11%), Positives = 147/420 (35%), Gaps = 47/420 (11%)

Query: 13  FSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVD 72
                R      + + ++ +GI +G+A ++  L   +  ++ +   I A+  +       
Sbjct: 259 LLMAWRAMSANKMRTALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTNTIDIYPG 318

Query: 73  QPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQE 123
           + + +           + +  ++    ++A +P I  +  +  G    A  V GV+ +  
Sbjct: 319 KDFGDDDPSTRQALVHDDMAALKAQSYVSAVSPSIGGSMRLRFGNIDVAASVLGVSDEYF 378

Query: 124 QRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPK 183
           +                 +   Q ++I       L     D V           +++   
Sbjct: 379 RVFGMAMEQGAPITREQVERQAQTVVIDLNTQRRLFPHMKDVV----------GQVILVG 428

Query: 184 RVRLHVAGILQLSGQLDHSF----AMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
            +   V G++     +  S       +P +     L   S    I +++ + +++ +  +
Sbjct: 429 NMPATVVGVVAEKKSMFGSNKALRVWVPYSTMANRLMGRSYFDSITIRIKEGYSSKEAEQ 488

Query: 240 DAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMA 294
               +         ++  +         +  Q ++  + L  V+ + V    +++ ++++
Sbjct: 489 QLVRLLTLRHGKKDIFTYNMDSLLQTAEKTTQTMQLFLTLVAVISLVVGGIGVMNIMLVS 548

Query: 295 VKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEK 354
           V +++ +I +   +GA+   +   F+   +L  L G   G+ +   + L +         
Sbjct: 549 VTERTREIGIRMAVGARSSDVMQQFLIEAVLVCLIGGALGISLSFAIGLIVE-------- 600

Query: 355 LIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       F+         + +F   + + ++ ++  + PAR A+ ++P   L+ +
Sbjct: 601 -----------MFLPNWRIAFPPMALFSAFLCSTVIGVVFGYLPARSAARLNPIDALARE 649



>gi|26990902|ref|NP_746327.1|   ABC export system, permease/ATP-binding protein, putative
           [Pseudomonas putida KT2440]
 gi|24985917|gb|AAN69791.1|   ABC export system, permease/ATP-binding protein, putative
           [Pseudomonas putida KT2440]
          Length = 654

 Score =  209 bits (531), Expect = 1e-52
 Identities = 65/426 (15%), Positives = 145/426 (34%), Gaps = 54/426 (12%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
           SL    R         +    + ++ +GI +GVA ++V L+   G +R++  ++ A   +
Sbjct: 266 SLQAAWRVMW------INRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMAAFGSN 319

Query: 66  GEIEAVDQPW------TNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVN 119
                   P           + +  + ++P +    P +    +V  G N +   V G N
Sbjct: 320 ILYLNGSPPTLREPAGRITLDDVAAIGELPQVKHIMPVLGEKMMVRHGNNSQQFYVGGNN 379

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
               +  +            +  +     +IG+ V + +          + P SNP  + 
Sbjct: 380 TFFPEIFNWPAVEGSFFTETDEASSAAVAVIGQKVREKM----------LAPGSNPIGQY 429

Query: 180 MQPKRVRLHVAGIL-----QLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNA 234
           +    V   V GIL         Q      ++P + A   L        IA+   D    
Sbjct: 430 LLIGNVPFQVVGILAGKGASSGDQDSDGRIVVPFSAAAIRLFGHRDPDYIAIAARDSGQV 489

Query: 235 NKLVRDAGEVTNS------YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIV 288
                    +            + +         R    +  ++     + + V    ++
Sbjct: 490 KDTEAAIDRLLRQRHQGKHDFELTNDAALIQAEARTQNSLSLMLGAIAAISLLVGGIGVM 549

Query: 289 STLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPI 348
           + ++M V++++ +I +    GA+   I   F+   ++  + G L G+ + +VV   LT  
Sbjct: 550 NIMLMTVRERTREIGIRMATGARQRDILRQFLSEAIMLSMVGGLTGIALALVVGASLT-- 607

Query: 349 IEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPA 408
                              +  +        +      A++  ++  + PAR+A+ +DP 
Sbjct: 608 -------------------LADIAVAFALPAIVGAFACAVITGVVFGFMPARKAARLDPV 648

Query: 409 RVLSGQ 414
           + L+ +
Sbjct: 649 KALTSE 654



>gi|2983943|gb|AAC07492.1|   hypothetical protein [Aquifex aeolicus VF5]
 gi|15606709|ref|NP_214089.1|   hypothetical protein aq_1585 [Aquifex aeolicus VF5]
 gi|7514463|pir||B70437   conserved hypothetical protein aq_1585 - Aquifex aeolicus
          Length = 394

 Score =  207 bits (528), Expect = 3e-52
 Identities = 102/413 (24%), Positives = 193/413 (46%), Gaps = 20/413 (4%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M L L + LR+    +   +   ++ +S  GI L V  +I+ L   +GF+ EL N+IL+ 
Sbjct: 1   MSLYLKVVLRYLFHAKGSSL--FMTFMSFFGIFLSVNAIILTLGVFSGFQDELKNKILSK 58

Query: 63  VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 122
            PH  I          +   + ++K   +     ++ +   + SG  ++++ VK ++ + 
Sbjct: 59  TPHLVITLYSD--YERERIKEVLEKEKEVEYFLSFVVYNAFLSSGEVIQSVSVKAIDYKD 116

Query: 123 EQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP 182
            +    +  F+          G + +I+GKG+A+   +  GD VS++ P        + P
Sbjct: 117 GEFQKFIKRFLTEG-------GTKGLILGKGIAEVFGLLVGDEVSLISPFGIRTPTGVIP 169

Query: 183 KRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
           K  +  V GI        D++   + L DA+++      V+   + + D + A+ +    
Sbjct: 170 KVKKFRVGGIFYTGSYDKDYAVVYMNLKDAKEFFKRDYGVNFTEVYIKDPYRADIVKEKV 229

Query: 242 GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
            +     V ++SWI     ++  +++ +  ++  ++L++ VA FNI S L + VK+K  D
Sbjct: 230 KKELGERVVVRSWIDLNKPLFNALELEKLGLFFILLLMVVVASFNITSLLFVKVKEKVRD 289

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           IAV +T G K   +  IF+  GL  G  G++ GVI   V++  +               +
Sbjct: 290 IAVFKTFGMKKRQVLMIFLSLGLFIGTVGAISGVISAYVLAYFINEYK--------LIRV 341

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
           S ++Y + ++P+ +   DV   L+ ALLLS ++S  PA RAS      VL  +
Sbjct: 342 SEEVYMMSYIPAHIKLKDVLATLLGALLLSFISSLIPALRASKEKVIEVLRKE 394



>gi|19703916|ref|NP_603478.1|   Lipoprotein releasing system transmembrane protein lolE
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|19714086|gb|AAL94777.1|   Lipoprotein releasing system transmembrane protein lolE
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 389

 Score =  206 bits (525), Expect = 8e-52
 Identities = 91/415 (21%), Positives = 191/415 (46%), Gaps = 32/415 (7%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
           +   I  +    R++       S++S +G+ +G+ VLIV L   NG ++ + N IL++  
Sbjct: 2   IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55

Query: 65  HGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGAN----LRAIQVKGVNP 120
           H  + + +   ++++E    ++ + G+    P I   G+V+        +  ++V G + 
Sbjct: 56  HITVYSPEN-ISDYEEISKDIETIKGVKGVVPTIETQGIVKYEGGIEPYVAGVKVVGYDL 114

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           ++  +   L  ++           ++ I+IG  +A A   K GD + ++           
Sbjct: 115 EKAVKTMNLDKYIIDGKIDL--EDKKAILIGNELAKATGAKVGDKIKLITSEETDL---- 168

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
                 ++VAGI Q    + D +  +IPL  AQ      ++V  +++++ + +NA KLV 
Sbjct: 169 -----EMNVAGIFQSGFYEYDINMVLIPLTTAQYITYSDNTVGRLSVRLDNPYNAQKLVI 223

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D         YI +W      +   + + + IM +   L+  VA F I  TL   V++K+
Sbjct: 224 DVARKLPETFYIGTWGEQNKALLSALTLEKTIMLVVFSLIAIVAGFLIWITLNTLVREKT 283

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DI ++R +G     I  IF+  G++ G+ G + G+I+ +++   +              
Sbjct: 284 KDIGIMRAMGFSKKNIMLIFLIQGIILGIIGIILGIIVSLILLYYIKNYA---------V 334

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L S+IY++  +P E+   ++  ++    ++ L++S +PA RA+ ++    L  +
Sbjct: 335 DLVSNIYYLKDIPIEISLKEIAIIVGANFIVILISSIFPAYRAARLENVEALRYE 389



>gi|33148228|gb|AAP95748.1|   lipoprotein releasing system transmembrane protein [Haemophilus
           ducreyi 35000HP]
 gi|33152006|ref|NP_873359.1|   lipoprotein releasing system transmembrane protein [Haemophilus
           ducreyi 35000HP]
          Length = 390

 Score =  206 bits (524), Expect = 1e-51
 Identities = 107/415 (25%), Positives = 187/415 (45%), Gaps = 28/415 (6%)

Query: 3   MPL-SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
           M L SL I +R+ R +       L++ ++++GI LGV  LI  LS MNG E      +L+
Sbjct: 1   MNLTSLFIAVRYWRSKSADRFGRLVTNLASLGIILGVMALITVLSVMNGLENMQKRNLLS 60

Query: 62  VVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
            +PH  +  V+  +   Q           +  +        +++S   + A Q+ GV   
Sbjct: 61  ALPHAIVSPVNGYFEKTQTLDLPA----FVTQSVAINQTNVIIQSQQAINAGQLIGVEQA 116

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNP-EHKLM 180
            +  L         D      +G   ++IG  +A  L +  G+ + +MI  ++       
Sbjct: 117 SDDPL-----LTDHDIEHLLPSGRFNVLIGSRLAHKLNIHPGEKIRLMITENSQYTPMGR 171

Query: 181 QPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKLVR 239
            P +    VAG+     +         LAD  + L +    + G  L + D F   +L  
Sbjct: 172 VPVQRLFTVAGLYFADHESSEYTLFANLADVGRLLRIDPEQLQGKRLYLQDPFMVTELAT 231

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
                  +   I  W    G  ++ ++M + +M L + L+I VA  NIV++L + V DK 
Sbjct: 232 FFS---PTQYKISDWREQKGEFFQAVRMEKNMMSLLISLIILVAISNIVTSLSLMVVDKQ 288

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            +IA+L+T G     +  IF++ G + G+ GS+ G IIGV+++L L  ++      I   
Sbjct: 289 AEIAILQTQGLTKRQVMHIFIFQGAIVGVIGSIIGGIIGVILTLNLNTLVGLFNPTI--- 345

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                      LP  +  L +  ++++++LLSLL + YPA RA+ I+PA+ L  +
Sbjct: 346 ----------HLPILIAPLQILIIVLSSVLLSLLCTLYPAYRATKIEPAQALRYE 390



>gi|51597040|ref|YP_071231.1|   ABC transporter(efflux), fused permease and ATP-binding domains
           [Yersinia pseudotuberculosis IP 32953]
 gi|51590322|emb|CAH21959.1|   ABC transporter(efflux), fused permease and ATP-binding domains
           [Yersinia pseudotuberculosis IP 32953]
          Length = 678

 Score =  206 bits (524), Expect = 1e-51
 Identities = 57/414 (13%), Positives = 145/414 (35%), Gaps = 47/414 (11%)

Query: 19  RGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNW 78
                 L + ++ +GI +G+A ++  ++   G ++++   I A+          + + + 
Sbjct: 294 AMAAQRLRTALTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDM 353

Query: 79  QE---------ALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSAL 129
           +            D + +   I +  P ++ +  +  G    +  V GV  Q        
Sbjct: 354 RSAAIHTLRDTDADVLAQQGYIHSVTPTVSTSVTLRYGNKSVSGTVNGVGEQYFLVRGYT 413

Query: 130 PSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHV 189
            +        +     Q+ +I +   D L                P  K++    +   V
Sbjct: 414 IAQGMAFTRTSVNDLMQEAVIDENTRDKLFPN----------GETPLGKVILLGSLPCRV 463

Query: 190 AGILQLS----GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVT 245
            G+        G  ++    IP   A + +   S +  I +++ D  +     +   ++ 
Sbjct: 464 IGVAAKKQSGFGSDENLNVWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVIKLL 523

Query: 246 -----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
                    ++ +       +      +  ++ +  V+ + V    +++ ++++V +++ 
Sbjct: 524 SQRHGTQDFFVMNTDSIRQTIQATTSTMTLLVSMIAVISLIVGGIGVMNIMLVSVTERTK 583

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           +I V   +GA+   I   F+   +L  L G   GV + + + L  +              
Sbjct: 584 EIGVRMAVGARASDIMQQFLIEAVLVCLLGGSLGVALSLGIGLLFSL------------- 630

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                 F            +    V + L+ ++  ++PA+RA+ +DP R L  +
Sbjct: 631 ------FSSNFSMVYSAASIITAFVCSSLIGVIFGFFPAKRAAEMDPIRALERE 678



>gi|34762631|ref|ZP_00143624.1|   Lipoprotein releasing system transmembrane protein lolE
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|27887711|gb|EAA24787.1|   Lipoprotein releasing system transmembrane protein lolE
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
          Length = 389

 Score =  205 bits (523), Expect = 1e-51
 Identities = 87/415 (20%), Positives = 189/415 (45%), Gaps = 32/415 (7%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
           +   I  +    R++       S++S +G+ +G+ VLIV L   NG ++ + N IL++  
Sbjct: 2   IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55

Query: 65  HGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGAN----LRAIQVKGVNP 120
           H  + + +   ++++E    ++ + G+    P I   G+V+        +  ++V G + 
Sbjct: 56  HITVYSPEN-ISDYEEISKEIETIKGVKGVVPTIETQGIVKYEGGIEPYVAGVKVVGYDL 114

Query: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
           ++  +   L  ++           ++ ++IG  +A A     GD + ++           
Sbjct: 115 EKAVKTMNLDKYIIDGKIDL--EDKKGVLIGNELAKATGATVGDKIKLITSEETDL---- 168

Query: 181 QPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
                 ++V GI Q    + D +  +IPL  AQ      S+V  +++++ + ++A KLV 
Sbjct: 169 -----EMNVVGIFQSGFYEYDINMVLIPLTTAQYITYSDSTVGRLSVRLDNPYDAQKLVI 223

Query: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
           D         +I +W      +   + + + IM +   L+  VA F I  TL   V++K+
Sbjct: 224 DVARKLPETYFIGTWGEQNKALLSALTLEKTIMLVVFSLIAIVAGFLIWITLNTLVREKT 283

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            DI ++R +G     I  IF+  G++ G+ G + G+I+ +++   +              
Sbjct: 284 KDIGIMRAMGFSKKNIMLIFLIQGIILGIIGIILGIIVSLILLYYIKNYA---------V 334

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            L S+IY++  +P E+   ++  ++    ++ L++S +PA RA+ ++    L  +
Sbjct: 335 DLVSNIYYLKDIPIEISLKEIAIIVGANFIVILISSIFPAYRAARLENVEALRYE 389



>gi|53721660|ref|YP_110645.1|   macrolide-specific ABC-type efflux carrier [Burkholderia
           pseudomallei K96243]
 gi|52212074|emb|CAH38081.1|   macrolide-specific ABC-type efflux carrier [Burkholderia
           pseudomallei K96243]
          Length = 653

 Score =  205 bits (523), Expect = 2e-51
 Identities = 57/424 (13%), Positives = 143/424 (33%), Gaps = 53/424 (12%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
           +  +        R      L ++++ +GI +G+  ++  ++   G +R + + I ++  +
Sbjct: 262 AFRMAWIALVSHR------LRTLLTMLGIIIGITSVVSIVAIGEGAKRYMLDEIGSIGTN 315

Query: 66  GEIEAVDQPWTNWQEAL---------DHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
                    W + +              +     I +A P  + + L+          V 
Sbjct: 316 TINVYPGADWGDSRADAIQTLVAADAAALADQIYIDSATPETSRSLLLRYRNVDVNALVS 375

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           GV  +  Q      +          +   Q  +I +     L             N NP 
Sbjct: 376 GVGERFFQVRGMKLAQGIAFGADEVRRQAQVAVIDENTRRKLF----------GANPNPL 425

Query: 177 HKLMQPKRVRLHVAGILQLS----GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVF 232
            +++    +   V G+        G + +    +P   A   L     +  I +++ D  
Sbjct: 426 GEVILIDNLPCVVIGVTASKKSAFGDMKNLNVWVPYTTASGRLFGQRHLDSITVRVRDGQ 485

Query: 233 NANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNI 287
            ++   R   ++          +  +       + +  Q +  ++ L  V+ + V    +
Sbjct: 486 PSDAAERSLTKLMLQRHGRKDFFTYNMDSVVKTVEKTGQSLTLLLSLIAVISLVVGGIGV 545

Query: 288 VSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTP 347
           ++ ++++V +++ +I +   +GA+   I   F+   +   L G   G+++   +S   + 
Sbjct: 546 MNIMLVSVTERTREIGIRMAVGARQTDIMQQFLVEAVTVCLMGGAIGIVLSFGMSFVFSL 605

Query: 348 IIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDP 407
                              F+D          +    + + L+ ++  + PAR AS +DP
Sbjct: 606 -------------------FVDQWKMVFSAASIASAFLCSTLIGVVFGFMPARNASRLDP 646

Query: 408 ARVL 411
              L
Sbjct: 647 IDAL 650



>gi|29340150|gb|AAO77944.1|   conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29348247|ref|NP_811750.1|   hypothetical protein BT2838 [Bacteroides thetaiotaomicron VPI-5482]
          Length = 408

 Score =  205 bits (523), Expect = 2e-51
 Identities = 95/411 (23%), Positives = 180/411 (43%), Gaps = 15/411 (3%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M     I  R+   +++   +++IS IS  G+AL    L+  LS  NGF+  + +   A 
Sbjct: 1   MNFPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVASFFTAF 60

Query: 63  VPHGEIEAVDQPWTNWQEA-LDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
            P  +I   +    + Q+  +  V  +P ++ +   +    +V+       + +KGV   
Sbjct: 61  DPQLKITIREGKVFDGQDERIRAVCALPEVSVSTETLEENAMVQYKDRQAMVVLKGVEDN 120

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALK--VKQGDWVSIMIPNSNPEHKL 179
            E              +    +     ++G  +   L   +   D + + +P  N +  +
Sbjct: 121 FEDLTEIDNILYGAGEFILHDSIVNYGVMGVELVSTLGTGLAFVDPLQVYLPKRNAKVNM 180

Query: 180 MQP----KRVRLHVAGILQLSGQ--LDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFN 233
             P     R  L+  G++ +  Q   D S+ +  L   +  LD  + VSGI LK+    N
Sbjct: 181 ANPGASFNRDYLYSPGVVFVVNQQKYDESYILTSLDFLRNLLDYTTEVSGIELKLKPNTN 240

Query: 234 ANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVM 293
            + +     ++      +++       ++R +++ + I YL +  ++ +ACFN++ +L M
Sbjct: 241 ISSVQSKIEKMLGDDFVVQNRYQQQADVFRIMEIEKLISYLFLTFILMIACFNVIGSLSM 300

Query: 294 AVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIE 353
            + DK  D+  LR+LGA D LI  IF++ G L  LFG++ G+I+G+++            
Sbjct: 301 LILDKKDDVITLRSLGASDKLISRIFLFEGRLISLFGAISGIILGLILCFIQQKFGIITL 360

Query: 354 KLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
              G  F+      +D  P  +H  DV  + +T L +  L+ WYP R  S 
Sbjct: 361 GGGGGTFV------VDAYPVSVHAWDVVLIFITVLAVGFLSVWYPVRYLSK 405



>gi|45358197|ref|NP_987754.1|   hypothetical protein MMP0634 [Methanococcus maripaludis S2]
 gi|44920954|emb|CAF30190.1|   conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 397

 Score =  205 bits (522), Expect = 2e-51
 Identities = 68/414 (16%), Positives = 147/414 (35%), Gaps = 39/414 (9%)

Query: 15  RGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQP 74
              R        S+++ IGI +G+  ++  +S   G +  +   I             Q 
Sbjct: 9   FAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPSQQ 68

Query: 75  WT-------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV-NPQQEQRL 126
            T            L  V+ V G+            V          V    +   +   
Sbjct: 69  ITSIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTYQIFF 128

Query: 127 SALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVR 186
           +    +          + +   +IG  +A     ++ D               ++    +
Sbjct: 129 TEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREID-----------IGDKIEINDKK 177

Query: 187 LHVAGILQLSGQLDH-SFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVT 245
             V GIL+  G  D  +  +IP   A +  D+    +   +K+ D  +  K+  D  +  
Sbjct: 178 YKVVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDEL 237

Query: 246 NS-----YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
                     + +       +     ++   +     + + V    I +T+ M++ ++  
Sbjct: 238 EDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRK 297

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           DI +L+ LGA++  I +IFV      GLFG + G I+G++++  +  +            
Sbjct: 298 DIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYV------------ 345

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
             + I     + + + W  +  VLV + ++ +L+ ++PAR  + ++P   L G+
Sbjct: 346 --AAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397



>gi|34557766|ref|NP_907581.1|   PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN
           [Wolinella succinogenes DSM 1740]
 gi|34483483|emb|CAE10481.1|   PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN
           [Wolinella succinogenes]
          Length = 643

 Score =  205 bits (522), Expect = 2e-51
 Identities = 67/429 (15%), Positives = 159/429 (37%), Gaps = 53/429 (12%)

Query: 5   LSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVP 64
           L L   ++ +   R   M    +V++ +GI +GVA +IV L+  +G +  +  RI A+  
Sbjct: 249 LELFEAMKMAF--RSLKMNLFRTVLTLLGIVIGVASVIVMLAIGDGAKNAVLERISAMGT 306

Query: 65  HGEIEAVDQPW--------TNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
           +  +     P         T   E ++ + ++  I AA P    +     G N ++  + 
Sbjct: 307 NILVIRPGMPNSRGFSNIATLIPEDMEAIMELDNIIAAMPENKKSVTTRYGNNDQSTSLN 366

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
             +    +  +            + K+  + +++GK V  AL               +  
Sbjct: 367 ATSSHFTKVRNWPLGKGVFFTEEDEKSYAKVVVLGKTVEKAL-----------FGEEDAL 415

Query: 177 HKLMQPKRVRLHVAGILQ-----LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDV 231
            + +    +   + G++       SG+ +    ++P      +L     +  I + + D+
Sbjct: 416 GRFILVDNIMFQIIGVMSNRGASASGEDEDDVILVPYTTGSLHLIGQKFLRNITVAVDDL 475

Query: 232 FNANKLVRDAGEVT------NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF 285
               +  R+   +            I++       + +    +  ++     + + V   
Sbjct: 476 SRMGETEREIHSLLLARHGGIEDFRIRNMASLIEDVTQTQNTLTILLGSIAAISLLVGGI 535

Query: 286 NIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQL 345
            +++ ++++V +++ +I +    GA+   I   F+   ++    G L GV+IG+ VS  +
Sbjct: 536 GVMNIMLVSVTERTKEIGIRIATGARMRHILQQFLIEAVVVSALGGLIGVVIGLGVSALI 595

Query: 346 TPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNI 405
             +                       P     + + +    A +  LL  + PAR+A+ +
Sbjct: 596 EGL---------------------GTPVYYSLMPIVWAFGCAFVTGLLFGYLPARKAARL 634

Query: 406 DPARVLSGQ 414
           DP   L+ +
Sbjct: 635 DPVVALASE 643



>gi|48731879|ref|ZP_00265623.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Pseudomonas fluorescens PfO-1]
          Length = 657

 Score =  205 bits (521), Expect = 2e-51
 Identities = 59/416 (14%), Positives = 141/416 (33%), Gaps = 48/416 (11%)

Query: 16  GRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPW 75
             R   +    + ++ +GI +GVA ++V L+   G +R++  ++ A   +    +   P 
Sbjct: 273 AWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYLSGAAPN 332

Query: 76  TNWQ------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSAL 129
                     + +  +  +P I    P       V  G       + G +    +  +  
Sbjct: 333 PRTPPGIVTLDEVAALASLPQITRIMPVNGAEAGVRFGNLDHMSYIGGNDTNFPEIFNWP 392

Query: 130 PSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHV 189
                     + + G    +IGK V D L              SNP  + +  + V   V
Sbjct: 393 VVEGSYFTEADERNGAAVAVIGKKVRDKLLKDV----------SNPIGQYILIENVPFQV 442

Query: 190 AGIL-----QLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEV 244
            G+L         Q   +   IP + A   L    +   + +   D    ++      ++
Sbjct: 443 VGVLAGKGASSGDQDSDNRIAIPYSAASVRLFGTHNPEYVVIAAADARKVHETEMAIEQL 502

Query: 245 T------NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
                       + +         R    +  ++     + + V    +++ ++M V+++
Sbjct: 503 MLQLHNGKKDFELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIGVMNIMLMTVRER 562

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
           + +I +    GA+   I   F+   ++  + G + G+ + ++V                 
Sbjct: 563 TREIGIRMATGARQRDILRQFLTEAVMLSVVGGIAGIGLALLVG---------------- 606

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                 +  +  +      + +      AL+  ++  + PAR+A+ +DP   L+ +
Sbjct: 607 -----GVLILSEVAVAFSLVAIAGAFACALITGVVFGFMPARKAARLDPVTALTSE 657



>gi|45442402|ref|NP_993941.1|   putative ABC transporter, ATP-binding protein [Yersinia pestis
           biovar Medievalis str. 91001]
 gi|22125377|ref|NP_668800.1|   putative ATP-binding component of a transport system [Yersinia
           pestis KIM]
 gi|45437267|gb|AAS62818.1|   putative ABC transporter, ATP-binding protein [Yersinia pestis
           biovar Medievalis str. 91001]
 gi|21958261|gb|AAM85051.1|   putative ATP-binding component of a transport system [Yersinia
           pestis KIM]
 gi|16123181|ref|NP_406494.1|   putative ABC transporter, ATP-binding protein [Yersinia pestis
           CO92]
 gi|15980956|emb|CAC92244.1|   putative ABC transporter, ATP-binding protein [Yersinia pestis
           CO92]
 gi|25307488|pir||AI0364   probable ABC transporter, ATP-binding protein YPO3000 [imported] -
           Yersinia pestis (strain CO92)
          Length = 678

 Score =  205 bits (521), Expect = 2e-51
 Identities = 57/414 (13%), Positives = 144/414 (34%), Gaps = 47/414 (11%)

Query: 19  RGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNW 78
                 L + ++ +GI +G+A ++  ++   G ++++   I A+          + + + 
Sbjct: 294 AMAAQRLRTALTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDM 353

Query: 79  QE---------ALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSAL 129
           +            D + +   I +  P ++ +  +  G    +  V GV  Q        
Sbjct: 354 RSAAIHTLRDTDADVLAQQGYIHSVTPTVSTSVTLRYGNKSVSGTVNGVGEQYFLVRGYT 413

Query: 130 PSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHV 189
            +        +     Q  +I +   D L                P  K++    +   V
Sbjct: 414 IAQGMAFTRTSVNDLMQDAVIDENTRDKLFPN----------GETPLGKVILLGSLPCRV 463

Query: 190 AGILQLS----GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVT 245
            G+        G  ++    IP   A + +   S +  I +++ D  +     +   ++ 
Sbjct: 464 IGVAAKKQSGFGSDENLNVWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVIKLL 523

Query: 246 -----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
                    ++ +       +      +  ++ +  V+ + V    +++ ++++V +++ 
Sbjct: 524 SQRHGTQDFFVMNTDSIRQTIQATTSTMTLLVSMIAVISLIVGGIGVMNIMLVSVTERTK 583

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           +I V   +GA+   I   F+   +L  L G   GV + + + L  +              
Sbjct: 584 EIGVRMAVGARASDIMQQFLIEAVLVCLLGGSLGVALSLGIGLLFSL------------- 630

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                 F            +    V + L+ ++  ++PA+RA+ +DP R L  +
Sbjct: 631 ------FSSNFSMVYSAASIITAFVCSSLIGVIFGFFPAKRAAEMDPIRALERE 678



>gi|28869362|ref|NP_791981.1|   macrolide ABC efflux protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28852603|gb|AAO55676.1|   macrolide ABC efflux protein [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 656

 Score =  204 bits (520), Expect = 3e-51
 Identities = 60/416 (14%), Positives = 135/416 (32%), Gaps = 48/416 (11%)

Query: 16  GRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPW 75
             R   +    + ++ +GI +GVA ++V L+   G +R++  ++ +   +        P 
Sbjct: 272 AWRVMWVNRFRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYLNGKAPN 331

Query: 76  T------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSAL 129
                     E +  + ++P +    P       V  G    +  V G +       +  
Sbjct: 332 PRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRFGNVDHSSYVGGNDTHFPAIFNWP 391

Query: 130 PSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHV 189
            +     +  + +      +IG  V   L    GD +       +P  + +  + V   V
Sbjct: 392 VAEGSYFSEADEQGAAAVAVIGYKVRQKLF---GDRI-------DPIGQYILIENVPFQV 441

Query: 190 AGILQLSGQLD-----HSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEV 244
            G+LQ  G         +   IP + A   L        I +   D  N  +       +
Sbjct: 442 VGVLQEKGATSGDLDSDNRIAIPYSSASIRLFGSQDPEYITIATRDANNVKQAEAAIRTL 501

Query: 245 TN------SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
                       + +         R    +  ++     + + V    +++ ++M V+++
Sbjct: 502 LQRLHNGKQDYELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIGVMNIMLMTVRER 561

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
           + +I +    GA+   I   F+   ++  + G L G++                      
Sbjct: 562 TREIGIRMATGARQRDILRQFLTEAVMLSVVGGLAGIV---------------------L 600

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       +        V      AL+  ++  + PAR+A+ +DP   L+ +
Sbjct: 601 ALAMGAALLASKVAVAFTLSAVIGAFACALVTGVIFGFMPARKAARLDPVAALTSE 656



>gi|16799311|ref|NP_469579.1|   hypothetical protein lin0234 [Listeria innocua Clip11262]
 gi|16412653|emb|CAC95467.1|   lin0234 [Listeria innocua]
 gi|25514520|pir||AC1462   membrane protein (probable ABC transporter component) homolog
           lin0234 [imported] - Listeria innocua (strain Clip11262)
          Length = 402

 Score =  204 bits (518), Expect = 5e-51
 Identities = 70/440 (15%), Positives = 161/440 (36%), Gaps = 64/440 (14%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M +  S+ +  +  +  +      L S ++ +GI +GVA +I+ +S  NG  +E+++++ 
Sbjct: 1   MNVLQSMKMAWKQLKASK------LRSFLTMLGIIIGVASVILLVSLGNGVTKEVDDQMG 54

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQK---VPGIAAAAPYINFTGLVESGANLRAIQVKG 117
            +  +           N +   D V K   + G+ + +P ++            + +V G
Sbjct: 55  DLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATYDYKSSSNKVIG 114

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
            N Q +   S      +     + + G++  +IG  VA  L               NP  
Sbjct: 115 TNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDL-----------FGFGNPIG 163

Query: 178 KLMQPKRVRLHVAGILQLSGQL----DHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFN 233
           + ++   +   V G+L+  G            IP++ AQ+ L   ++V  I ++     +
Sbjct: 164 ETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAED 222

Query: 234 ANKLVRDAGEVT-------------------NSYVYIKSWIGTYGYMYRDIQMIRAIMYL 274
            + +V                               + +              +   +  
Sbjct: 223 VDFVVNTLESRLAIKFGNEKEQEENASSAQMGPSYQVINQQEILNAFNTISTTLTTALGA 282

Query: 275 AMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG 334
              + + V    I++ ++++V +++ +I + + LGAK   I   F+   ++  + G + G
Sbjct: 283 IAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGIIG 342

Query: 335 VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLA 394
           ++IGV  +L    +                      + S +    + +  V +L + ++ 
Sbjct: 343 ILIGVSGALIFGSVAG--------------------ISSGITAGTIIFSFVFSLCIGVIF 382

Query: 395 SWYPARRASNIDPARVLSGQ 414
              PA +AS + P   L  +
Sbjct: 383 GIAPANKASKLRPIDALRSE 402



>gi|24212973|ref|NP_710454.1|   Lipoprotein releasing system transmembrane protein lolC [Leptospira
           interrogans serovar Lai str. 56601]
 gi|24193650|gb|AAN47472.1|   Lipoprotein releasing system transmembrane protein lolC [Leptospira
           interrogans serovar lai str. 56601]
          Length = 458

 Score =  204 bits (518), Expect = 5e-51
 Identities = 94/448 (20%), Positives = 194/448 (43%), Gaps = 38/448 (8%)

Query: 4   PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVV 63
            L  L+  R+ RG R  G++SL S +S I +A+GV++LIV LS  NGF+R++   +    
Sbjct: 10  SLIFLVTSRYIRGSRVAGLLSLKSRLSFIVMAVGVSLLIVVLSIFNGFQRQVKESLWQGG 69

Query: 64  PHGEIEAV--DQPWTNWQEALDHVQKVPG----IAAAAPYINFTGLVESGANLRAIQVKG 117
           PH  +E         N+++ +  + + P     I +    I   GL+++  +   I V+ 
Sbjct: 70  PHITVENKFDSGDIKNYEKIIAWLSRNPYLKDRIVSIGGSITSHGLIQNTNSFIPIMVRA 129

Query: 118 --VNPQQEQRLSALPSFVQGDAWRNFKAGE----QQIIIGKGVADALKVKQGDWVSIMIP 171
             V    +   + L +F +       +        Q++IGK +A       G  +++ +P
Sbjct: 130 LPVENIHDLVGNKLTNFPRIVHHNREEIARYNVENQVLIGKEMAGIYDFDLGANLTMAVP 189

Query: 172 NSN-PEHKLMQPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMT 229
                  K +          G  +      D  +  + L  AQ++ ++  SV+ IA+K+ 
Sbjct: 190 GGRFSLGKGVDVSIKTFRTVGFFKTGYYNYDTHYVFLSLPVAQKFFNLKDSVNQIAIKVK 249

Query: 230 DVFNANKLVRDAGEVTNSY-----------VYIKSWIGTYGYMYRDIQMIRAIMYLAMVL 278
            + +     ++  +   +              +++        +  +++ + I+ + + L
Sbjct: 250 SLDDLQNCKKEILKEFRNPDFENEIGYSASFSVRTIAEEQENFFTALKLEKTIISIIVFL 309

Query: 279 VIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIG 338
            I +A   +V+++   V+ K   I VL+ LG     +  IF    ++ G+  SL G + G
Sbjct: 310 FIILAALGMVASVYSLVRAKRKSIGVLKALGLPSSGVLLIFTLNAMVVGVLASLVGGVSG 369

Query: 339 VVVSLQLTPIIEWIEKLI-------------GHQFLSSDIYFIDFLPSELHWLDVFYVLV 385
           + ++  L  I+  + +LI               + +  D+Y+ D +P ++    +F V  
Sbjct: 370 IFIASNLETIVNGLSELINMVGYYFYHSEWTNVELVPKDVYYFDHIPVDIDISFIFMVTT 429

Query: 386 TALLLSLLASWYPARRASNIDPARVLSG 413
            A +LS +A ++PAR A+ ++P   +  
Sbjct: 430 AATILSGIAGYFPARWAAGLNPVDTIRN 457



>gi|47573265|ref|ZP_00243304.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Rubrivivax gelatinosus PM1]
          Length = 661

 Score =  204 bits (518), Expect = 6e-51
 Identities = 65/425 (15%), Positives = 147/425 (34%), Gaps = 55/425 (12%)

Query: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 67
            + LR  R           SV++ +GI +GV  +I  L+  +G ++E+ NRI A+  +  
Sbjct: 274 KMALRSLRANL------FRSVLTLLGIVIGVGSVIAMLAIGDGAKQEVINRISAMGSNLM 327

Query: 68  IEAVDQPW--------TNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVN 119
           +     P         T     +  + +VP + AA P  N +  +       +  + G +
Sbjct: 328 LVRPGAPNQRGFNSTATLVVADVAAIDQVPNVLAAVPEQNSSATLRYSGADYSTSINGTS 387

Query: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
            +         +     +  +  +     ++G+ VA AL              +NP  + 
Sbjct: 388 SKFPLARQWPVAQGSFFSAEDEASYATVAVLGQTVAKALFPD----------GANPVGEY 437

Query: 180 MQPKRVRLHVAGIL-----QLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNA 234
           +    +   V G++        G        +P A +   L     +  + + + DV   
Sbjct: 438 VLVNNLLFQVVGVMTARGASPMGSDQDDIVFVPYATSSLRLSGQRFMRNVTVAVDDVSRI 497

Query: 235 NKLVRDAGEVTNS-----YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVS 289
           ++       +           I++         +    +  ++     + + V    +++
Sbjct: 498 DETQEAVESLLLDRHGVVDFQIRNMASIIEATEQTQNTLTILLGSIAAISLLVGGIGVMN 557

Query: 290 TLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPII 349
            ++++V +++ +I +    GA++  I   F+   ++    G   GV+ G+  +  +    
Sbjct: 558 IMLVSVTERTREIGIRMATGARERNIMQQFLIEAMVVSAIGGAVGVVGGLATAAAIGAF- 616

Query: 350 EWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPAR 409
                                 P +     V      A    L+  W PAR+A+ +DP  
Sbjct: 617 --------------------GTPVQYSLAPVLLAFGCAFGTGLVFGWLPARKAAQLDPVV 656

Query: 410 VLSGQ 414
            L+ +
Sbjct: 657 ALAAE 661



>gi|45656137|ref|YP_000223.1|   lipoprotein releasing system transmembrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|45599370|gb|AAS68860.1|   lipoprotein releasing system transmembrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 458

 Score =  203 bits (517), Expect = 7e-51
 Identities = 94/448 (20%), Positives = 194/448 (43%), Gaps = 38/448 (8%)

Query: 4   PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVV 63
            L  L+  R+ RG R  G++SL S +S I +A+GV++LIV LS  NGF+R++   +    
Sbjct: 10  SLIFLVTSRYIRGSRVAGLLSLKSRLSFIVMAVGVSLLIVVLSIFNGFQRQVKESLWQGG 69

Query: 64  PHGEIEAV--DQPWTNWQEALDHVQKVPG----IAAAAPYINFTGLVESGANLRAIQVKG 117
           PH  +E         N+++ +  + + P     I +    I   GL+++  +   I V+ 
Sbjct: 70  PHITVENKFDSGDIKNYEKIIAWLSRNPYLKDRIVSIGGSITSHGLIQNTNSFIPIMVRA 129

Query: 118 --VNPQQEQRLSALPSFVQGDAWRNFKAGE----QQIIIGKGVADALKVKQGDWVSIMIP 171
             V    +   + L +F +       +        Q++IGK +A       G  +++ +P
Sbjct: 130 LPVENIHDLVGNKLTNFPRIVHHSREEIARYNVENQVLIGKEMAGIYDFDLGANLTMAVP 189

Query: 172 NSN-PEHKLMQPKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSVSGIALKMT 229
                  K +          G  +      D  +  + L  AQ++ ++  SV+ IA+K+ 
Sbjct: 190 GGRFSLGKGVDVSIKTFRTVGFFKTGYYNYDTHYVFLSLPVAQKFFNLKDSVNQIAIKVK 249

Query: 230 DVFNANKLVRDAGEVTNSY-----------VYIKSWIGTYGYMYRDIQMIRAIMYLAMVL 278
            + +     ++  +   +              +++        +  +++ + I+ + + L
Sbjct: 250 SLDDLQNCKKEILKEFRNPDFENEIGYSASFSVRTIAEEQENFFTALKLEKTIISIIVFL 309

Query: 279 VIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIG 338
            I +A   +V+++   V+ K   I VL+ LG     +  IF    ++ G+  SL G + G
Sbjct: 310 FIILAALGMVASVYSLVRAKRKSIGVLKALGLPSSGVLLIFTLNAMVVGVLASLVGGVSG 369

Query: 339 VVVSLQLTPIIEWIEKLI-------------GHQFLSSDIYFIDFLPSELHWLDVFYVLV 385
           + ++  L  I+  + +LI               + +  D+Y+ D +P ++    +F V  
Sbjct: 370 IFIASNLETIVNGLSELINMVGYYFYHSEWTNVELVPKDVYYFDHIPVDIDISFIFMVTT 429

Query: 386 TALLLSLLASWYPARRASNIDPARVLSG 413
            A +LS +A ++PAR A+ ++P   +  
Sbjct: 430 AATILSGIAGYFPARWAAGLNPVDTIRN 457



>gi|34104014|gb|AAQ60374.1|   probable ABC transporter, ATP-binding protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34498159|ref|NP_902374.1|   probable ABC transporter, ATP-binding protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 644

 Score =  202 bits (515), Expect = 1e-50
 Identities = 50/413 (12%), Positives = 132/413 (31%), Gaps = 47/413 (11%)

Query: 19  RGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNW 78
                 L + ++ +GI +G+A ++  ++   G    +   I  +          + W + 
Sbjct: 262 AMSANRLRTALTMLGIVIGIASVVSVIAIGEGSRDYVLKGIREMGTQTITVFRGKDWGDD 321

Query: 79  QEA---------LDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSAL 129
           +           +  ++    + +  P       +          V GV     +     
Sbjct: 322 KADGVRTFLPGDVAALEGEGYVDSVTPETAQAQRIRYRNVDVNASVIGVGRDFFRVQGMK 381

Query: 130 PSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHV 189
            +  Q  +  +     Q +++ K     L             +     +++    V   V
Sbjct: 382 LAEGQSFSRDDIHFQRQVVVLDKNSRRKL-----------FGDGEAVGRVILVGMVPATV 430

Query: 190 AGIL---QLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN 246
            G++         +     +P + A   L          +++ D        +  G +  
Sbjct: 431 IGVVAQRDRGFGGNSLQMWMPYSTAASRLFGQQHFDRFVIRVKDGQPTKLAEKAIGALLT 490

Query: 247 S-----YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
                   +  +       +    + +  ++ L  V+ + V    +++ ++++V +++ +
Sbjct: 491 QRHGGKDFFTYNMDEILKTVESSSRALSLLLALVAVISLVVGGIGVMNIMLVSVTERTRE 550

Query: 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFL 361
           I +   +GA+ G +   F+   +L  L G   GV +   VS   +               
Sbjct: 551 IGIRMAVGARQGDVLQQFLTEAVLVCLVGGAIGVALSYGVSFVFSL-------------- 596

Query: 362 SSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                F+      L    +   +  + L+ +L  + PAR A+ ++P   L+ +
Sbjct: 597 -----FVTEWKMSLSPPVIALAVACSSLIGVLFGFLPARNAAKLNPIDALARE 644



>gi|30249852|ref|NP_841922.1|   DUF214 [Nitrosomonas europaea ATCC 19718]
 gi|30180889|emb|CAD85811.1|   DUF214 [Nitrosomonas europaea ATCC 19718]
          Length = 407

 Score =  202 bits (514), Expect = 1e-50
 Identities = 67/429 (15%), Positives = 160/429 (37%), Gaps = 61/429 (14%)

Query: 16  GRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQP- 74
             R      L + ++ +G+ +GVA +++ LS   G +  +N+ I ++  H  I       
Sbjct: 10  ATRALQTNRLRTALTMLGMIIGVAAVVLMLSIGQGAQTSINSAIASMGSHLLIVMPGATS 69

Query: 75  -----------WTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQE 123
                       T   +    + ++P + A AP I+ T  +  GAN  +  + GV P   
Sbjct: 70  SGGLRWGSGSVKTLTVQDAHAIAELPMVDATAPVISGTAQLNYGANNWSTVLTGVTPDYF 129

Query: 124 QRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPK 183
              +   +  +     + ++G +  ++G+  A++L             N +P  K+++  
Sbjct: 130 SVNNWEMADGEIFTEGDLRSGTRVAVLGQITANSL-----------FGNEDPVGKIVRIA 178

Query: 184 RVRLHVAGIL-----QLSGQLDHSFAMIPLADAQQYL---DMGSSVSGIALKMTDVFNAN 235
                V G+L      LSG+       IPL  AQ+ +       S++ + ++     +  
Sbjct: 179 NRPFTVVGVLVAKGQSLSGRDQDDNVFIPLTTAQRQIIGNQFPGSINHMTVRAKTADSME 238

Query: 236 KLVRDAGEVTNS----------YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF 285
               +   +                +++            +++  ++     + + V   
Sbjct: 239 AAEAEITRLLRQRHRISAHMENDFTVRNLTALASVASNTARVMAWMLGAVASVSLLVGGI 298

Query: 286 NIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQL 345
            I++ ++++V +++ +I +   +GA   +I   F+   L+  + G + G+ +G+  +   
Sbjct: 299 GIMNIMLVSVTERTREIGIRMAIGANQRMILTQFLLESLMICILGGITGIALGIGGAWLA 358

Query: 346 TPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNI 405
           + I E                    L   +    +      + ++ +    YPAR+A+ +
Sbjct: 359 SRIAE--------------------LEIVITPGMIALAFSFSSIIGIFFGLYPARKAAAL 398

Query: 406 DPARVLSGQ 414
            P   L  +
Sbjct: 399 KPVEALRHE 407



>gi|53730882|ref|ZP_00348995.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Dechloromonas aromatica RCB]
          Length = 399

 Score =  202 bits (514), Expect = 2e-50
 Identities = 73/436 (16%), Positives = 148/436 (33%), Gaps = 59/436 (13%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M    +  + LR    +R      L S ++ +GIA+G+A +I+  S   G  R +     
Sbjct: 1   MLWSDAFQLALRAITAQR------LRSFLTLLGIAVGIAAVILLTSIGEGIHRFVLGEFT 54

Query: 61  AVVPHGEIEAVDQPWT-------------NWQEALDHVQKVPGIAAAAPYINFTGLVESG 107
               +    A  +  T                +    ++++P + A  P +     VE  
Sbjct: 55  QFGTNVITVAPGKTKTGGSPSGLPSSARPLSLDDAKSIERLPHVVAVTPNVRGNAEVEGN 114

Query: 108 ANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVS 167
              R   + GVN +      +     Q     +  +    +++G  + + L         
Sbjct: 115 GRTRRTLIYGVNSKLPLIFRSTVQSGQFLPADDEGSARPFVVLGSKLKNEL--------- 165

Query: 168 IMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLD----HSFAMIPLADAQQYLDMGSSVSG 223
               + NP  + ++   +   V G+L   GQ         A +P A AQ+  +    V  
Sbjct: 166 --FGSENPLGQRLRISGLHFRVIGVLAPKGQFLGIDLDDTAFVPTARAQELFNREG-VDE 222

Query: 224 IALKMTDVFNANKLVRD-----AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVL 278
           I +   +   +  +                  I +       +   + ++   +     +
Sbjct: 223 INIAAEEGIPSAIVANRVKTHLIDRHNREDFTIVTQEEMLKTLSNILNVLTMAVGALGGI 282

Query: 279 VIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIG 338
            + V    IV+ + +AV +++G+I +L  LGA    I A+F+   +     G + G+ +G
Sbjct: 283 SLLVGGVGIVTIMTIAVTERTGEIGLLVALGAPRRTILALFLGEAVALSALGGIFGLALG 342

Query: 339 VVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYP 398
             ++  +   +                     LP       V      A+ + L A   P
Sbjct: 343 FGLAQLIHFALPA-------------------LPVHTPLSFVLLAEGIAITIGLAAGVLP 383

Query: 399 ARRASNIDPARVLSGQ 414
           AR A+ ++P   L  +
Sbjct: 384 ARNAARLNPVEALRTE 399



>gi|48731629|ref|ZP_00265373.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Pseudomonas fluorescens PfO-1]
          Length = 653

 Score =  202 bits (514), Expect = 2e-50
 Identities = 53/427 (12%), Positives = 148/427 (34%), Gaps = 53/427 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
              +  +        R      + ++++ +GI +G+  ++   +   G +R +   I A+
Sbjct: 259 FKEAFNMAWVALISHR------MRTLLTMLGIVIGITSVVSISAIGEGAKRYVLKDIQAI 312

Query: 63  VPHGEIEAVDQPWTNWQE---------ALDHVQKVPGIAAAAPYINFTGLVESGANLRAI 113
             +         + + +           +  + ++  + +A P +    L+         
Sbjct: 313 GSNTIDIYSGTSFGDSRSAAIETLVPADVTALNQLYYVDSATPVVGRNLLLRYRNIDLDA 372

Query: 114 QVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNS 173
           QV GV+    Q            +  + +   Q ++I       L  +            
Sbjct: 373 QVNGVSDLYFQVRGIKMESGIPFSESDARRQAQVVVIDHNTRHRLFGE----------GV 422

Query: 174 NPEHKLMQPKRVRLHVAGILQLSGQLDHS----FAMIPLADAQQYLDMGSSVSGIALKMT 229
           +P  +++    +   V G+   +  +  S       +P   A   L     +  I++++ 
Sbjct: 423 DPLGQVILIGNLPCTVIGVAAENKNIFSSSKSLNVWVPYETAAGRLLGQRYLDSISVRIK 482

Query: 230 DVFNANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVAC 284
           D   +  +  +  ++          +  +       + +  + +  ++ L  V+ + V  
Sbjct: 483 DGQPSKVVEDNVNKLMLQRHGTKDFFTNNLDSVMQTVQKTSRSLALLLSLIAVISLVVGG 542

Query: 285 FNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQ 344
             +++ ++++V +++ +I +   +GA+   IR  F+   ++  L G   G+ +   +   
Sbjct: 543 IGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLLGGAIGISLSYAIGHL 602

Query: 345 LTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
            +  I+  E +                        V   ++ + L+ ++  + PAR AS 
Sbjct: 603 FSLFIKEWEMVF-------------------SLTSVLTAVICSTLIGIVFGFVPARNASR 643

Query: 405 IDPARVL 411
           +DP   L
Sbjct: 644 LDPIEAL 650



>gi|16802241|ref|NP_463726.1|   hypothetical protein lmo0195 [Listeria monocytogenes EGD-e]
 gi|16409552|emb|CAC98410.1|   lmo0195 [Listeria monocytogenes]
 gi|25514801|pir||AD1099   membrane protein (probable ABC transporter component) homolog
           lmo0195 [imported] - Listeria monocytogenes (strain
           EGD-e)
          Length = 402

 Score =  202 bits (513), Expect = 2e-50
 Identities = 70/440 (15%), Positives = 161/440 (36%), Gaps = 64/440 (14%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M +  S+ +  +  +  +      L S ++ +GI +GVA +I+ +S  NG  +E+++++ 
Sbjct: 1   MNVLQSMKMAWKQLKASK------LRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMG 54

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQK---VPGIAAAAPYINFTGLVESGANLRAIQVKG 117
            +  +           N +   D V K   + G+ + +P ++            + +V G
Sbjct: 55  DLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIG 114

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
            N Q +   S      +     + + G++  +IG  VA  L               +P  
Sbjct: 115 TNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDL-----------FGFGDPIG 163

Query: 178 KLMQPKRVRLHVAGILQLSGQL----DHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFN 233
           + ++   +   V G+L+  G            IP++ AQ+ L   ++V  I ++     +
Sbjct: 164 ETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAED 222

Query: 234 ANKLVRDAGEVT-------------------NSYVYIKSWIGTYGYMYRDIQMIRAIMYL 274
            + +V                               + +              +   +  
Sbjct: 223 VDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGA 282

Query: 275 AMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG 334
              + + V    I++ ++++V +++ +I + + LGAK   I   F+   ++  + G + G
Sbjct: 283 IAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIG 342

Query: 335 VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLA 394
           +IIGV  +L    +                      + S +    + +  V +L + ++ 
Sbjct: 343 IIIGVSGALIFGSVAG--------------------ISSGITAGTIIFSFVFSLCIGVIF 382

Query: 395 SWYPARRASNIDPARVLSGQ 414
              PA +AS + P   L  +
Sbjct: 383 GIAPANKASKLRPIDALRSE 402



>gi|47096188|ref|ZP_00233787.1|   ABC transporter, permease protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47015436|gb|EAL06370.1|   ABC transporter, permease protein [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 402

 Score =  202 bits (513), Expect = 2e-50
 Identities = 70/440 (15%), Positives = 161/440 (36%), Gaps = 64/440 (14%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M +  S+ +  +  +  +      L S ++ +GI +GVA +I+ +S  NG  +E+++++ 
Sbjct: 1   MNVLQSMKMAWKQLKASK------LRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMG 54

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQK---VPGIAAAAPYINFTGLVESGANLRAIQVKG 117
            +  +           N +   D V K   + G+ + +P ++            + +V G
Sbjct: 55  DLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKSSSNKVIG 114

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
            N Q +   S      +     + + G++  +IG  VA  L               +P  
Sbjct: 115 TNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDL-----------FGFGDPIG 163

Query: 178 KLMQPKRVRLHVAGILQLSGQL----DHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFN 233
           + ++   +   V G+L+  G            IP++ AQ+ L   ++V  I ++     +
Sbjct: 164 ETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAED 222

Query: 234 ANKLVRDAGEVT-------------------NSYVYIKSWIGTYGYMYRDIQMIRAIMYL 274
            + +V                               + +              +   +  
Sbjct: 223 VDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGA 282

Query: 275 AMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG 334
              + + V    I++ ++++V +++ +I + + LGAK   I   F+   ++  + G + G
Sbjct: 283 IAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIG 342

Query: 335 VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLA 394
           +IIGV  +L    +                      + S +    + +  V +L + ++ 
Sbjct: 343 IIIGVSGALIFGSVAG--------------------ISSGITAGTIIFSFVFSLCIGVIF 382

Query: 395 SWYPARRASNIDPARVLSGQ 414
              PA +AS + P   L  +
Sbjct: 383 GIAPANKASKLRPIDALRSE 402



>gi|46143385|ref|ZP_00135343.2|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
          Length = 640

 Score =  201 bits (512), Expect = 3e-50
 Identities = 56/425 (13%), Positives = 145/425 (34%), Gaps = 52/425 (12%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
           S  + +      +      L ++++ +GI +G+  +I  ++   G ++++ + I ++  +
Sbjct: 252 SFKMAINAITAHK------LRALLTMLGIVIGITSVISVVALGQGSQQQILSNINSLGTN 305

Query: 66  GEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
                    + + +              + K   + +  P  N  G V  G       + 
Sbjct: 306 TMTIMNGTGFGDRRANLTKNLTISDAMMLNKQQFVDSTTPSSNLNGTVIYGNTNVTASIN 365

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           GV  Q            +       K   Q ++I       L +               E
Sbjct: 366 GVGEQFVNVKGLKMISGRFFDADEVKLSSQVVVIDGNTKKDLGL-----------TDPVE 414

Query: 177 HKLMQPKRVRLHVAGILQLSGQLDHSF--AMIPLADAQQYLDMGSSVSGIALKMTDVFNA 234
            K++   +  L V G+ Q S  L+ +     +P     Q +     +  + +K+ D   +
Sbjct: 415 GKVILVDKKPLTVIGMAQESNNLNQTSLKMWMPYTTLMQRISGEKFIDSLTVKVKDNVES 474

Query: 235 NKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVS 289
               +   E+          ++ +       +      ++ ++    ++ + V    +++
Sbjct: 475 QTAEKSINELLTAKHGKKDFFVMNSDTIKQTITSTTNTMKLLISSIAMISLIVGGIGVMN 534

Query: 290 TLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPII 349
            ++++V +++ +I V   +GAK   I   F+   +L  L G + G++  + +      + 
Sbjct: 535 IMLVSVTERTKEIGVRMAIGAKQNNILQQFLIEAILICLLGGIIGILFAMAIIFSFNTL- 593

Query: 350 EWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPAR 409
                                    L    V   +  + L+ ++  + PA+ AS ++P  
Sbjct: 594 ------------------GTNFKMILSPASVVLAVFCSTLIGVVFGYMPAKNASKLNPIT 635

Query: 410 VLSGQ 414
            L+ +
Sbjct: 636 ALAQE 640



>gi|46140814|ref|ZP_00203756.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Dechloromonas aromatica RCB]
          Length = 402

 Score =  201 bits (512), Expect = 3e-50
 Identities = 72/440 (16%), Positives = 156/440 (35%), Gaps = 64/440 (14%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M +  +LL+ LR  R         L S ++ +GI +GV  +I  ++  NG  + ++++I 
Sbjct: 1   MILN-ALLLALREIR------RNLLRSFLTVLGIVIGVGAVITMVTLGNGATKMVSDQIA 53

Query: 61  AVVPHGEIEAVDQPWTNWQE-----------ALDHVQKVPGIAAAAPYINFTGLVESGAN 109
           ++  +  +    Q     ++                Q+V G+ A AP +     +  G  
Sbjct: 54  SLGSNLLMVMPGQRLGPGRDSAGAPKFKIADIEAIQQQVNGLKAVAPVVGSPVTLVVGTQ 113

Query: 110 LRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIM 169
             +  V G         +   +  +       +AG+   ++G  V   L           
Sbjct: 114 NWSSTVSGTTNDYFISGNWKIAAGRQFTDDEERAGKAVCVVGNTVKKEL----------- 162

Query: 170 IPNSNPEHKLMQPKRVRLHVAGILQLSGQ-----LDHSFAMIPLADAQQYLDMGSSVSGI 224
               NP    ++ K     V G+L   GQ           ++PL   Q+ L     +  +
Sbjct: 163 FGAGNPVGSSIRVKTFDCEVIGLLVAKGQGGMGQDQDDTVLMPLRTTQRRLTGSLDIGNV 222

Query: 225 ALKMTDVFNAN----------KLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYL 274
            + + D  +A           +  R   E  +    +         +   I  + A++  
Sbjct: 223 MVSLKDGTDATVAIAQLRSLLRERRKLAENADDNFNVMDTKQIAETLSGTIGTMTALLGA 282

Query: 275 AMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG 334
              + + V    I++ ++++V +++ +I +   +GA +  +   F+   ++    G L G
Sbjct: 283 VAAVSLLVGGIGIMNIMLVSVTERTREIGIRLAIGALENEVLWQFLIEAVVLSACGGLVG 342

Query: 335 VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLA 394
           V +  V  L L+ ++                     +P   +          +  + ++ 
Sbjct: 343 VGLAFVACLGLSSLM--------------------HIPFMFNPAINLTAFGFSAAIGVIF 382

Query: 395 SWYPARRASNIDPARVLSGQ 414
            + PARRA+ +DP   L  +
Sbjct: 383 GYVPARRAAQLDPIEALRHE 402



>gi|56414005|ref|YP_151080.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Paratypi A str. ATCC 9150]
 gi|56128262|gb|AAV77768.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Paratypi A str. ATCC 9150]
          Length = 648

 Score =  201 bits (511), Expect = 3e-50
 Identities = 50/427 (11%), Positives = 148/427 (34%), Gaps = 49/427 (11%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
           S    L  +          + ++++ +GI +G+A ++  +   +  ++ +   I A+  +
Sbjct: 253 SFREALSMAW--LAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTN 310

Query: 66  GEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
                  + + +           + L  +QK P + +A P ++ +  +  G    A+   
Sbjct: 311 TIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNAN 370

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           GV+                      +   Q +++       L              +N  
Sbjct: 371 GVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPN----------KANVV 420

Query: 177 HKLMQPKRVRLHVAGILQLSGQLDHS----FAMIPLADAQQYLDMGSSVSGIALKMTDVF 232
            +++    + + V G+ +    +  +       +P +     +   S ++ I +++ D  
Sbjct: 421 GEVVLVGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGV 480

Query: 233 NANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNI 287
           ++++  +    +          +  +         +    ++  + L  V+ + V    +
Sbjct: 481 DSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGV 540

Query: 288 VSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTP 347
           ++ ++++V +++ +I +   +GA+   +   F+   +L  L G   G+ + + ++  L  
Sbjct: 541 MNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAMLVCLVGGALGISLSMFIAFMLQL 600

Query: 348 IIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDP 407
            +   E                          +    + +    +L  W PAR A+ +DP
Sbjct: 601 FLPGWEIGF-------------------SLTALASAFLCSTFTGILFGWLPARNAARLDP 641

Query: 408 ARVLSGQ 414
              L+ +
Sbjct: 642 VDALARE 648



>gi|29142412|ref|NP_805754.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi Ty2]
 gi|16759815|ref|NP_455432.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29138042|gb|AAO69603.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi Ty2]
 gi|16502108|emb|CAD05344.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|25307490|pir||AF0609   conserved hypothetical ABC transporter ybjZ [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
          Length = 648

 Score =  201 bits (511), Expect = 4e-50
 Identities = 50/427 (11%), Positives = 148/427 (34%), Gaps = 49/427 (11%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
           S    L  +          + ++++ +GI +G+A ++  +   +  ++ +   I A+  +
Sbjct: 253 SFREALSMAW--LAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTN 310

Query: 66  GEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
                  + + +           + L  +QK P + +A P ++ +  +  G    A+   
Sbjct: 311 TIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNAN 370

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           GV+                      +   Q +++       L              +N  
Sbjct: 371 GVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPN----------KANVV 420

Query: 177 HKLMQPKRVRLHVAGILQLSGQLDHS----FAMIPLADAQQYLDMGSSVSGIALKMTDVF 232
            +++    + + V G+ +    +  +       +P +     +   S ++ I +++ D  
Sbjct: 421 GEVVLVGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGV 480

Query: 233 NANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNI 287
           ++++  +    +          +  +         +    ++  + L  V+ + V    +
Sbjct: 481 DSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGV 540

Query: 288 VSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTP 347
           ++ ++++V +++ +I +   +GA+   +   F+   +L  L G   G+ + + ++  L  
Sbjct: 541 MNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQL 600

Query: 348 IIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDP 407
            +   E                          +    + +    +L  W PAR A+ +DP
Sbjct: 601 FLPGWEIGF-------------------SLTALASAFLCSTFTGILFGWLPARNAARLDP 641

Query: 408 ARVLSGQ 414
              L+ +
Sbjct: 642 VDALARE 648



>gi|15075093|emb|CAC46650.1|   PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN
           [Sinorhizobium meliloti]
 gi|15965824|ref|NP_386177.1|   PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN
           [Sinorhizobium meliloti 1021]
          Length = 647

 Score =  200 bits (510), Expect = 5e-50
 Identities = 65/426 (15%), Positives = 136/426 (31%), Gaps = 57/426 (13%)

Query: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 67
            + LR  R           ++++ +GI +GV  ++  L+   G +  + +RI ++     
Sbjct: 258 KMALRALRAN------LFRTILTLLGIVIGVGSVVAMLAIGTGAQNSVLDRISSMGSDLL 311

Query: 68  IEAV----------DQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKG 117
           +                 T      D + ++  +A A P +  T  +  G         G
Sbjct: 312 VVRPSMANFRGSAGGTNVTLVPADADAITELANVAFAVPEMTSTVTLRRGNIDYQTTANG 371

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
             PQ  +  S      +     + +      ++G+ V   L  +  D +           
Sbjct: 372 TVPQFTEAKSWKIGRGEFINRNDMETYAPVAVLGETVVKTLFPEGSDPI----------G 421

Query: 178 KLMQPKRVRLHVAGILQ-----LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVF 232
           + +   ++   V G++        G       ++PL      L    ++  I +K+ D  
Sbjct: 422 QYVLVNKIPFQVIGVMSGMGASAGGNDQDDVVLVPLTTGSMRLFGQRNIRTITVKVQDAS 481

Query: 233 NANKLVRDAGEVTN-----SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNI 287
             +        + N         I +              ++  +     + + V    +
Sbjct: 482 AIDLTQERIQALLNERHRKDDTQITNMSSVREAFTETSNTMKFFLGSVAAISLLVGGIGV 541

Query: 288 VSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTP 347
           ++ ++++V +++ +I V    GA++  I   F+   L+    G   GV+ G+        
Sbjct: 542 MNIMLVSVSERTREIGVRMATGARERDILVQFIVEALVVSAIGGAIGVVAGLSTGYAAKA 601

Query: 348 IIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDP 407
                                  +P       V      A L  LL  + PAR AS + P
Sbjct: 602 F---------------------GMPVSFTPGPVALAFACAFLTGLLFGYLPARNASRLQP 640

Query: 408 ARVLSG 413
           A  LS 
Sbjct: 641 AVALSA 646



>gi|37525538|ref|NP_928882.1|   Macrolide-specific ABC-type efflux carrier protein MacB
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36784966|emb|CAE13884.1|   Macrolide-specific ABC-type efflux carrier protein MacB
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 647

 Score =  200 bits (509), Expect = 5e-50
 Identities = 51/430 (11%), Positives = 148/430 (34%), Gaps = 53/430 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
              +L +  R         +  + ++++ +GI +G+A ++  L   +     + + I  +
Sbjct: 253 FNEALFMAWR------AMVVNKMRTLLTMLGIIIGIASVVTILVIGDAARASVLSDIKEI 306

Query: 63  VPHGEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAI 113
             +       + +                D ++  P I A +P I     +  G    + 
Sbjct: 307 ATNTIDIYPGEDFGIDDPVSKQALKIADADAIKVQPYILAVSPEIEGQMRLRKGNIDVSS 366

Query: 114 QVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNS 173
           +V GV  +  Q  +   +   G +    +   Q ++I K     L               
Sbjct: 367 KVTGVGDEYFQVYALRFAQGIGFSLDMIRRQGQVVVIDKNTQRKLFPH----------QK 416

Query: 174 NPEHKLMQPKRVRLHVAGILQLSGQLDHSF----AMIPLADAQQYLDMGSSVSGIALKMT 229
           N   +++    +   + G++        +       +P +     L   S +  I +++ 
Sbjct: 417 NVIGEVILVGNMPATIVGVIANRESAFGNSKLLHIWLPYSTMTSRLMNRSYLDSITVRVK 476

Query: 230 DVFNANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVAC 284
           D +N+    +   ++         ++  +         +    ++  + +  V+ + V  
Sbjct: 477 DDYNSKDAEKMIVQLLTLRHGKKDIFTDNVDMLVKAAEKTAHTLQLFLTMVAVISLIVGG 536

Query: 285 FNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQ 344
             +++ ++++V +++ +I +   +GA+   +R  F+   +L  L G + G+ +   ++  
Sbjct: 537 IGVMNIMLVSVTERTREIGIRMAVGARTSDVRQQFLIEAILVCLVGGVLGIGLSYTIAFI 596

Query: 345 LTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
               +     +                      + +      +  + ++  + PAR A+ 
Sbjct: 597 AQLALPGWHFVF-------------------QPIALLSAFACSTAIGVIFGFLPARNAAR 637

Query: 405 IDPARVLSGQ 414
           +DP   L+ +
Sbjct: 638 LDPIEALARE 647



>gi|62127100|gb|AAX64803.1|   putative ABC superfamily (atp&memb) transport protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
          Length = 648

 Score =  200 bits (509), Expect = 6e-50
 Identities = 50/427 (11%), Positives = 148/427 (34%), Gaps = 49/427 (11%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
           S    L  +          + ++++ +GI +G+A ++  +   +  ++ +   I A+  +
Sbjct: 253 SFREALSMAW--LAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTN 310

Query: 66  GEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
                  + + +           + L  +QK P + +A P ++ +  +  G    A+   
Sbjct: 311 TIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNAN 370

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           GV+                      +   Q +++       L              +N  
Sbjct: 371 GVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPN----------KANVV 420

Query: 177 HKLMQPKRVRLHVAGILQLSGQLDHS----FAMIPLADAQQYLDMGSSVSGIALKMTDVF 232
            +++    + + V G+ +    +  +       +P +     +   S ++ I +++ D  
Sbjct: 421 GEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGV 480

Query: 233 NANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNI 287
           ++++  +    +          +  +         +    ++  + L  V+ + V    +
Sbjct: 481 DSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGV 540

Query: 288 VSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTP 347
           ++ ++++V +++ +I +   +GA+   +   F+   +L  L G   G+ + + ++  L  
Sbjct: 541 MNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQL 600

Query: 348 IIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDP 407
            +   E                          +    + +    +L  W PAR A+ +DP
Sbjct: 601 FLPGWEIGF-------------------SLTALASAFLCSTFTGILFGWLPARNAARLDP 641

Query: 408 ARVLSGQ 414
              L+ +
Sbjct: 642 VDALARE 648



>gi|16419454|gb|AAL19878.1|   putative ABC superfamily (atp&memb) transport protein [Salmonella
           typhimurium LT2]
 gi|16764304|ref|NP_459919.1|   putative transport protein [Salmonella typhimurium LT2]
          Length = 648

 Score =  200 bits (508), Expect = 7e-50
 Identities = 50/427 (11%), Positives = 148/427 (34%), Gaps = 49/427 (11%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
           S    L  +          + ++++ +GI +G+A ++  +   +  ++ +   I A+  +
Sbjct: 253 SFREALSMAW--LAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTN 310

Query: 66  GEIEAVDQPWTNWQ---------EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVK 116
                  + + +           + L  +QK P + +A P ++ +  +  G    A+   
Sbjct: 311 TIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNAN 370

Query: 117 GVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPE 176
           GV+                      +   Q +++       L              +N  
Sbjct: 371 GVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPN----------KANVV 420

Query: 177 HKLMQPKRVRLHVAGILQLSGQLDHS----FAMIPLADAQQYLDMGSSVSGIALKMTDVF 232
            +++    + + V G+ +    +  +       +P +     +   S ++ I +++ D  
Sbjct: 421 GEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGV 480

Query: 233 NANKLVRDAGEVT-----NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNI 287
           ++++  +    +          +  +         +    ++  + L  V+ + V    +
Sbjct: 481 DSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGV 540

Query: 288 VSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTP 347
           ++ ++++V +++ +I +   +GA+   +   F+   +L  L G   G+ + + ++  L  
Sbjct: 541 MNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQL 600

Query: 348 IIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDP 407
            +   E                          +    + +    +L  W PAR A+ +DP
Sbjct: 601 FLPGWEIGF-------------------SLTALASAFLCSTFTGILFGWLPARNAARLDP 641

Query: 408 ARVLSGQ 414
              L+ +
Sbjct: 642 VDALARE 648



>gi|50086114|ref|YP_047624.1|   macrolide transport protein (ABC superfamily, atp_bind
           (N-terminal), membrane (C-terminal)) [Acinetobacter sp.
           ADP1]
 gi|49532090|emb|CAG69802.1|   macrolide transport protein (ABC superfamily, atp_bind
           (N-terminal), membrane (C-terminal)) [Acinetobacter sp.
           ADP1]
          Length = 664

 Score =  200 bits (508), Expect = 8e-50
 Identities = 55/410 (13%), Positives = 146/410 (35%), Gaps = 47/410 (11%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNW----- 78
            + + ++ +GI +G+A ++  ++  NG ++++   I ++  +       + + +      
Sbjct: 283 RMRTFLTMLGIIIGIASVVTVVALGNGSQKQILENISSLGTNTITVFQGRGFGDNSKTAN 342

Query: 79  -----QEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFV 133
                    D +   P + A +P ++ +  +    N     + GV+              
Sbjct: 343 FKTLVPSDADALSSQPYVTAVSPMVSSSKTIRYKENEATATINGVSNDYFDVKGLTFKDG 402

Query: 134 QGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGIL 193
           Q    R+ +   Q ++I                      SNP  +++    V   + GI+
Sbjct: 403 QSFDQRSVRDLTQDVVIDTNTQKQFF----------TDGSNPIGQVVLLGSVPARIIGIV 452

Query: 194 Q----LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVT---- 245
           +      G  D     +P       +   S+V  I +++ D ++ +        +     
Sbjct: 453 EPQTSSMGSDDSLNVYMPYTTVMSRMLGQSNVRNIIVRINDQYSTSAAENAIVNLLTLRH 512

Query: 246 -NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAV 304
               ++  +       + +    +  ++    V+ + V    +++ ++++V +++ +I V
Sbjct: 513 GQQDIFTMNSDSIRQTIEKTTSTMTLLVSAIAVISLIVGGIGVMNIMLVSVTERTQEIGV 572

Query: 305 LRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSD 364
              +GA+   I   F+   +L  L G + GV++ + +   +  +                
Sbjct: 573 RMAVGARQSDILQQFLIEAILVCLIGGVLGVLLSLGLGQLINKVAAGNFA---------- 622

Query: 365 IYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                          +    V + L+ ++  + PAR A+ +DP   LS +
Sbjct: 623 --------VAYSTTSIVAAFVCSTLIGVVFGFLPARNAAQLDPVAALSRE 664



>gi|50119829|ref|YP_048996.1|   macrolide-specific ABC-type efflux carrier [Erwinia carotovora
           subsp. atroseptica SCRI1043]
 gi|49610355|emb|CAG73799.1|   macrolide-specific ABC-type efflux carrier [Erwinia carotovora
           subsp. atroseptica SCRI1043]
          Length = 650

 Score =  200 bits (508), Expect = 9e-50
 Identities = 47/409 (11%), Positives = 148/409 (36%), Gaps = 47/409 (11%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQ---- 79
            + + ++ +GI +G+A ++  ++   G + ++   I ++          + + +      
Sbjct: 271 RMRTFLTMLGIIIGIASVVSVVALGKGSQEQVLANINSMGTSTLEIFPGKGFGDMDASAI 330

Query: 80  -----EALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQ 134
                  +  + + P + +  P ++ +  +  G    +  + GV  Q             
Sbjct: 331 QTLRASDIQPLTQQPYVHSVTPSVSTSVTMRYGNIAVSASISGVGEQFFTVRGYTLERGV 390

Query: 135 GDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQ 194
                +     Q  +I K   D L               +P  +++    + + + G++ 
Sbjct: 391 LFPRSSVDELTQDAVIDKNTRDKLFPH----------GEDPIGQVILVGSLPVRIIGVVS 440

Query: 195 LS----GQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNS--- 247
            +    G  ++    +P     + +   S +  I +++ D  + +   +   ++      
Sbjct: 441 KNQGGFGSDENLNVWVPYTTVMKRMVGQSYLKSITVRVKDNVDMSIAEQRITDLLMQRHG 500

Query: 248 --YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
               +I +       + +    +  ++ +  ++ + V    +++ ++++V +++ +I V 
Sbjct: 501 TKDFFIMNTDSIRQMIEKTTTTLTLLVSMIALISLLVGGIGVMNIMLVSVTERTREIGVR 560

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
             +GA+   I   F+   +L  LFG + GV + + + +    +      +          
Sbjct: 561 MAVGARTSDIMQQFLIEAVLVCLFGGIAGVALSLAIGVLFAQLSSNFAMI---------- 610

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                         +    + + L+ ++  ++PARRA+ ++P   L  +
Sbjct: 611 ---------YSSSSIIAAFLCSSLIGIIFGFFPARRAARMEPIHALERE 650



>gi|53712880|ref|YP_098872.1|   ABC transporter permease protein [Bacteroides fragilis YCH46]
 gi|52215745|dbj|BAD48338.1|   ABC transporter permease protein [Bacteroides fragilis YCH46]
          Length = 435

 Score =  199 bits (506), Expect = 1e-49
 Identities = 92/430 (21%), Positives = 185/430 (43%), Gaps = 32/430 (7%)

Query: 2   AMPLSLLIGLRFSR-GRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
            + LS  +  R  R       +     VI+ IGIA+G+AV+I+ +S + GF+ E+ N+++
Sbjct: 21  KLRLSYFLARRIYRDTDGGKQVSRPAVVIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVI 80

Query: 61  AVVPHGEIEAVDQ-------PWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAI 113
               H +I   D        P       +  +  +P +     Y    G++++    + +
Sbjct: 81  GFGSHIQISNFDAVGSYETHPVVVNDSMMVALSALPEVKHVQRYSTKPGMIKTDDAFQGM 140

Query: 114 QVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNS 173
            +KGV P+ +                +  A   Q++I K +AD LK+K GD +       
Sbjct: 141 VLKGVGPEFDPAFFRDHLIEGEIPAFSDTASTNQVVISKAIADRLKLKLGDKIYTYFIQK 200

Query: 174 NPEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDV 231
           +        +  RL V GI Q +  + D+ F +  L    +  +     VSG  L++ D 
Sbjct: 201 D-------VRARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDY 253

Query: 232 FNANKLVRDA-------GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVAC 284
                +            ++     Y++S       ++  + ++   +++ ++L++GVA 
Sbjct: 254 DKLEDITYRIATDTDNKQDIYGGTYYVQSIEQMNPQIFAWLDLLDLNVWVILILMVGVAG 313

Query: 285 FNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQ 344
           F ++S L++ + +++  I +L+ LGA D  IR +F+W+ +     G L G  IG+V  + 
Sbjct: 314 FTMISGLLIIILERTQMIGILKALGANDFTIRKVFLWFSVFLIGKGMLWGNAIGIVFCI- 372

Query: 345 LTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASN 404
                  ++   G   L  + Y++  +P  ++      +    LL S+L    P+   + 
Sbjct: 373 -------LQSQFGLFKLDPETYYVSMVPVSMNIWLFLLINAGTLLTSVLMLVGPSYLITK 425

Query: 405 IDPARVLSGQ 414
           I+PA  +  +
Sbjct: 426 INPADSMRYE 435



>gi|30249074|ref|NP_841144.1|   probable ATP-binding/permease fusion ABC transporter [Nitrosomonas
           europaea ATCC 19718]
 gi|30138691|emb|CAD84992.1|   probable ATP-binding/permease fusion ABC transporter [Nitrosomonas
           europaea ATCC 19718]
          Length = 659

 Score =  197 bits (502), Expect = 4e-49
 Identities = 65/424 (15%), Positives = 141/424 (33%), Gaps = 54/424 (12%)

Query: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 67
               R     R      + + ++ +GI +GVA +IV L+   G ++ + +++ ++     
Sbjct: 273 RAAWRVMWIHR------VRTSLTLLGIVIGVASVIVMLAIGEGTKQRVIDQMGSMGTTIM 326

Query: 68  IEAVDQPWT------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQ 121
             + D P T        +E LD V ++P I+   P I    LV      + I V      
Sbjct: 327 YMSSDVPSTGGPVGVITEEDLDEVARLPEISRVMPVIGDPILVRHQNVDKQIYVFSSPYI 386

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
                    +  +       +     +++G  +  +               SNP  + + 
Sbjct: 387 MPMVHHWRVAQGRFFTETEDRELAPVVVLGHKIYRSFFPHL----------SNPVGQYLL 436

Query: 182 PKRVRLHVAGIL-----QLSGQLDHSFAMIPLADAQ-QYLDMGSSVSGIALKMTDVFNAN 235
                  V G++     +   Q       IP    + +          I ++   +    
Sbjct: 437 IGTSPFEVIGVMAERGAESGSQNYDDMVFIPYRAGRARVYQAQEQPDYIVMEAASMDQVQ 496

Query: 236 KLVRDA-----GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVST 290
           +                   I +              +  ++ L   + + V    +++ 
Sbjct: 497 EAEEAIRALLLERHGREDFRIGNAAARLKTQLETRDTMTRMLGLVAAVSLLVGGIGVMNV 556

Query: 291 LVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIE 350
           ++M V++++ +I +    GA++  I + F+   +L  + G   GVI+G+ V   L     
Sbjct: 557 MLMTVRERTREIGIRMATGAREYDILSQFLIEAMLVTITGGTVGVILGLTVGALLVFW-- 614

Query: 351 WIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARV 410
                               +P    +  +      A++  L+  + PAR A+ +DP   
Sbjct: 615 -------------------EVPVVFSFGVMIGAFACAVITGLIFGYMPARTAARLDPVVA 655

Query: 411 LSGQ 414
           LS +
Sbjct: 656 LSSE 659



>gi|46906427|ref|YP_012816.1|   ABC transporter, permease protein [Listeria monocytogenes str. 4b
           F2365]
 gi|47092878|ref|ZP_00230661.1|   ABC transporter, permease protein [Listeria monocytogenes str. 4b
           H7858]
 gi|47018782|gb|EAL09532.1|   ABC transporter, permease protein [Listeria monocytogenes str. 4b
           H7858]
 gi|46879691|gb|AAT02993.1|   ABC transporter, permease protein [Listeria monocytogenes str. 4b
           F2365]
          Length = 402

 Score =  197 bits (502), Expect = 4e-49
 Identities = 70/440 (15%), Positives = 161/440 (36%), Gaps = 64/440 (14%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M +  S+ +  +  +  +      L S ++ +GI +GVA +I+ +S  NG  +E+++++ 
Sbjct: 1   MNVLQSMKMAWKQLKASK------LRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMG 54

Query: 61  AVVPHGEIEAVDQPWTNWQEALDHVQK---VPGIAAAAPYINFTGLVESGANLRAIQVKG 117
            +  +           N +   D V K   + G+ + +P ++            + +V G
Sbjct: 55  DLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIG 114

Query: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
            N Q +   S      +     + + G++  +IG  VA  L               +P  
Sbjct: 115 TNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDL-----------FGFGDPIG 163

Query: 178 KLMQPKRVRLHVAGILQLSGQL----DHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFN 233
           + ++   +   V G+L+  G            IP++ AQ+ L   ++V  I ++     +
Sbjct: 164 ETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAED 222

Query: 234 ANKLVRDAGEVT-------------------NSYVYIKSWIGTYGYMYRDIQMIRAIMYL 274
            + +V                               + +              +   +  
Sbjct: 223 VDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGA 282

Query: 275 AMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG 334
              + + V    I++ ++++V +++ +I + + LGAK   I   F+   ++  + G + G
Sbjct: 283 IAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGIIG 342

Query: 335 VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLA 394
           +IIGV  +L    +                      + S +    + +  V +L + ++ 
Sbjct: 343 IIIGVSGALIFGSVAG--------------------ISSGITAGTIIFSFVFSLCIGVIF 382

Query: 395 SWYPARRASNIDPARVLSGQ 414
              PA +AS + P   L  +
Sbjct: 383 GIAPANKASKLRPIDALRSE 402



>gi|20806779|ref|NP_621950.1|   ABC-type transport systems, involved in lipoprotein release,
           permease components [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515240|gb|AAM23554.1|   ABC-type transport systems, involved in lipoprotein release,
           permease components [Thermoanaerobacter tengcongensis
           MB4]
          Length = 391

 Score =  197 bits (500), Expect = 6e-49
 Identities = 68/424 (16%), Positives = 150/424 (35%), Gaps = 53/424 (12%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
           +L I +R     +      L S ++ +GI +GV  +I  +S   G  + + ++I ++  +
Sbjct: 6   ALKIAIRSILSNK------LRSFLTMLGIIIGVTAVIALVSIGQGSTKSVTSQIQSMGSN 59

Query: 66  GEIEAV---DQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLR-AIQVKGVNPQ 121
             + +V       +   E    ++    I A +P I+     + G N   +  V GVN  
Sbjct: 60  LIMVSVMGRGSQASLTYEQAMTLKDGNYIKAVSPVISSNVTAKYGNNSVDSAMVNGVNSD 119

Query: 122 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 181
            +   S   +  +  +  + +   +  ++G  VA  L              ++P  K ++
Sbjct: 120 YQAIRSIQVAEGRFISPMDDEGRNKVAVLGHNVATEL-----------FGFTDPVGKTIK 168

Query: 182 PKRVRLHVAGILQLSGQL----DHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
                  V G+L L G      D     IP+     Y     ++  I +  ++       
Sbjct: 169 LNGQAFTVVGVLALKGSSIAGSDDDAIFIPIKTMF-YFAKNKNIRQIYIGASNPDTVEIA 227

Query: 238 VRDAGEVTNS-------YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVST 290
                               I         +      +  ++     + + V    I++ 
Sbjct: 228 KNMINNHLLEVFKGDTSAFTIIDQSQILSTVNSVTTTLSLLLGGIAGISLLVGGIGIMNI 287

Query: 291 LVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIE 350
           ++++V +++ +I + + LGAK   I   F+   L     G + G+I G ++++ L   + 
Sbjct: 288 MLVSVTERTREIGIRKALGAKKRDILLQFIIESLTLSGLGGILGIIAGYILAVTLGKAMN 347

Query: 351 WIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARV 410
                               + +      +      ++L+ L    YPA +A+N++P   
Sbjct: 348 --------------------IDANPTLSTILISFSFSVLVGLFFGVYPANKAANLNPIEA 387

Query: 411 LSGQ 414
           L  +
Sbjct: 388 LRYE 391



>gi|60492532|emb|CAH07303.1|   putative transmembrane permease [Bacteroides fragilis NCTC 9343]
 gi|60681098|ref|YP_211242.1|   putative transmembrane permease [Bacteroides fragilis NCTC 9343]
          Length = 414

 Score =  196 bits (499), Expect = 8e-49
 Identities = 93/429 (21%), Positives = 185/429 (43%), Gaps = 32/429 (7%)

Query: 3   MPLSLLIGLRFSR-GRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILA 61
           M LS  +  R  R       +     VI+ IGIA+G+AV+I+ +S + GF+ E+ N+++ 
Sbjct: 1   MRLSYFLARRIYRDTDGGKQVSRPAVVIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVIG 60

Query: 62  VVPHGEIEAVDQ-------PWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQ 114
              H +I   D        P       +  +  +P +     Y    G++++    + + 
Sbjct: 61  FGSHIQISNFDAVGSYETHPVVVNDSMMVALSALPEVKHVQRYSTKPGMIKTDDAFQGMV 120

Query: 115 VKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSN 174
           +KGV P+ +                +  A   Q++I K +AD LK+K GD +       +
Sbjct: 121 LKGVGPEFDPAFFRDHLIEGEIPAFSDTASTNQVVISKAIADRLKLKLGDKIYTYFIQKD 180

Query: 175 PEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVF 232
                   +  RL V GI Q +  + D+ F +  L    +  +     VSG  L++ D  
Sbjct: 181 -------VRARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDYD 233

Query: 233 NANKLVRDA-------GEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF 285
               +            ++     Y++S       ++  + ++   +++ ++L++GVA F
Sbjct: 234 KLEDITYRIATDTDNKQDIYGGTYYVQSIEQMNPQIFAWLDLLDLNVWVILILMVGVAGF 293

Query: 286 NIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQL 345
            ++S L++ + +++  I +L+ LGA D  IR +F+W+ +     G L G  IG+V  +  
Sbjct: 294 TMISGLLIIILERTQMIGILKALGANDFTIRKVFLWFSVFLIGKGMLWGNAIGIVFCI-- 351

Query: 346 TPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNI 405
                 ++   G   L  + Y++  +P  ++      +    LL S+L    P+   + I
Sbjct: 352 ------LQSQFGLFKLDPETYYVSMVPVSMNIWLFLLINAGTLLTSVLMLVGPSYLITKI 405

Query: 406 DPARVLSGQ 414
           +PA  +  +
Sbjct: 406 NPADSMRYE 414



>gi|46198957|ref|YP_004624.1|   ABC transporter permease protein [Thermus thermophilus HB27]
 gi|55980977|ref|YP_144274.1|   ABC transporter, permease protein [Thermus thermophilus HB8]
 gi|46196581|gb|AAS80997.1|   ABC transporter permease protein [Thermus thermophilus HB27]
 gi|55772390|dbj|BAD70831.1|   ABC transporter, permease protein [Thermus thermophilus HB8]
          Length = 419

 Score =  196 bits (499), Expect = 1e-48
 Identities = 67/442 (15%), Positives = 140/442 (31%), Gaps = 71/442 (16%)

Query: 7   LLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHG 66
           L I  +            L S ++ +G+ +GVA ++       G  R +   +  +  + 
Sbjct: 15  LRIAWKAIAAN------PLRSALTALGVIIGVAAVVALTMVGQGTTRNVTQLLEGLGTNL 68

Query: 67  EIEAV--------------DQPWTNWQEALDHVQKV--PGIAAAAPYINFTGLVESGANL 110
                                P T        +Q+     +   AP       + SG+  
Sbjct: 69  LTVGPAQGSRGPGGGLVRAGGPETIPLSDAYAIQEAFAEEVVGVAPVAQERFQIRSGSTN 128

Query: 111 RAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMI 170
               V G  P   +  +A P       W +  A  +  ++G GVA+ L            
Sbjct: 129 FQATVVGTWPDFAKVRNAEPEKGSFFTWDDVTAKRRVAVLGYGVAEDL-----------F 177

Query: 171 PNSNPEHKLMQPKRVRLHVAGILQLSGQLD----HSFAMIPLADAQQYLDMGS----SVS 222
              +P  + ++   +   V G+L   G       +    +PL+   Q L         V+
Sbjct: 178 GTDDPLGQRIRINGIPFTVIGVLPDKGDQGFVSTNYQVFVPLSTYLQRLARPEAGEAKVN 237

Query: 223 GIALKMTDVFNANKLVRDAGEVTNS----------YVYIKSWIGTYGYMYRDIQMIRAIM 272
            I L+         L                       + +       +    + +   +
Sbjct: 238 TIYLQGASRDRLKDLQERLTRFLAERHGLTDPNDYDFSVANQQDALESVNATTRTLTLFL 297

Query: 273 YLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSL 332
                + + V    I++ ++++V +++ +I V + LGA+   I A F+   ++  + G  
Sbjct: 298 GGVAAISLLVGGIGIMNIMLVSVTERTREIGVRKALGARPRDILAQFLAESVVLSVGGGT 357

Query: 333 CGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL 392
            GV++G+ ++  +   +                     +               A+L+ +
Sbjct: 358 LGVVLGLGLAGAVGRAL--------------------TVTPVFSPGSAAVAFFFAVLVGI 397

Query: 393 LASWYPARRASNIDPARVLSGQ 414
               YPA RA+ +DP   L  +
Sbjct: 398 FFGLYPAWRAARLDPVEALRYE 419



>gi|47530813|ref|YP_022162.1|   abc transporter, permease protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49188090|ref|YP_031343.1|   ABC transporter, permease protein [Bacillus anthracis str. Sterne]
 gi|30265278|ref|NP_847655.1|   ABC transporter, permease protein [Bacillus anthracis str. Ames]
 gi|21397718|ref|NP_653703.1|   DUF214, Predicted permease [Bacillus anthracis str. A2012]
 gi|30259956|gb|AAP29141.1|   ABC transporter, permease protein [Bacillus anthracis str. Ames]
 gi|47505961|gb|AAT34637.1|   ABC transporter, permease protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49182017|gb|AAT57393.1|   ABC transporter, permease protein [Bacillus anthracis str. Sterne]
          Length = 399

 Score =  196 bits (498), Expect = 1e-48
 Identities = 64/437 (14%), Positives = 162/437 (37%), Gaps = 61/437 (13%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M++  S+ I L      +      L S ++ +GI +GV  +I  ++   G E  L ++ +
Sbjct: 1   MSLLDSIKIALSSILAHK------LRSALTMLGIIIGVGSIITVVAIGQGGEAALKSQFV 54

Query: 61  AVVPHGEIEAVDQPWTN------------WQEALDHVQKVPGIAAAAPYINFTGLVESGA 108
                           +             +E +  ++K+P I+      +    ++   
Sbjct: 55  GAGNQTVPIHYSADINDPFGMGMVEAPKITEEDIFEIKKIPEISHVVTTNSSMEPLDIED 114

Query: 109 NLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSI 168
               + + G++ +            +     +   G   ++I K + +            
Sbjct: 115 KKEMVSITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEK----------- 163

Query: 169 MIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDH---SFAMIPLADAQQYLDMGSSVSGIA 225
           +  ++NP  K+++ K   + + G+ +   +      S A++P++           +  I+
Sbjct: 164 VFKDANPVGKIIEMKGQPMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYGK-DEIQNIS 222

Query: 226 LKMTDVFNANKLVRDAGEVTNSY--------VYIKSWIGTYGYMYRDIQMIRAIMYLAMV 277
           ++  +V N  K  + A +V NS           + +       + +   ++  I+     
Sbjct: 223 VQAKNVDNLEKAGKKAADVLNSRKPTDATGKYEVMNLKEIQEGISKMTGIMTMIIGGIAG 282

Query: 278 LVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVII 337
           + + V    +++ ++++V +++ +I V + LGA    I   F+   ++  L G L G+ +
Sbjct: 283 ISLVVGGIGVMNIMLVSVTERTREIGVRKALGATRSKILLQFLIEAVMLTLLGGLIGIGL 342

Query: 338 GVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWY 397
           G   +  ++   +W                    P  + W  V   ++ ++ L ++    
Sbjct: 343 GYGGAYIVSTFAKW--------------------PPLVSWEVVVGGVLFSMTLGIIFGLI 382

Query: 398 PARRASNIDPARVLSGQ 414
           PA +A+ +DP   L  +
Sbjct: 383 PANKAAKLDPIEALRYE 399



>gi|52425184|ref|YP_088321.1|   hypothetical protein MS1129 [Mannheimia succiniciproducens MBEL55E]
 gi|52307236|gb|AAU37736.1|   unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 643

 Score =  195 bits (497), Expect = 1e-48
 Identities = 50/409 (12%), Positives = 147/409 (35%), Gaps = 48/409 (11%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQ---- 79
            + S+++ +GI +G+  ++  ++  NG ++++ + I  +  +         + + +    
Sbjct: 265 KMRSLLTMLGIIIGITSVVSVVALGNGSQQKILSNISGLGTNTMTIFNGTGFGDRRAEQM 324

Query: 80  -----EALDHVQKVPGIAAAAPYINFTGLVESGANL-RAIQVKGVNPQQEQRLSALPSFV 133
                   + + K   +    P  + +GL+  G     +  +KG+  Q            
Sbjct: 325 QNLTVNDANALAKQSYVQNVTPNSSSSGLLIYGNQSFTSTNLKGIGEQYFDVEGMTLKQG 384

Query: 134 QGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGIL 193
           +    +  +   Q  ++ +    +           + PN NP  K++   +    + G++
Sbjct: 385 RSITAQEVRDNAQVALLDESSKKS-----------IFPNDNPIDKIVMFAKRPFRIIGVV 433

Query: 194 ---QLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVT----- 245
              Q+           P       +  G+ +  I +K+ D  N     +   E       
Sbjct: 434 ADRQMGAASSSLNIYAPYTTVMNKVTGGTKIDSITVKIADNVNTAVAEKSLTEYLTVRHG 493

Query: 246 NSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVL 305
               +I +       +      ++ ++     + + V    +++ ++++V +++ +I V 
Sbjct: 494 KKDFFIMNSDTIKQTIESTTGTMKLLISSIAFISLIVGGIGVMNIMLVSVTERTKEIGVR 553

Query: 306 RTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDI 365
             +GA+   I   F+   +L  + G + G+++ +++                        
Sbjct: 554 MAIGARKSNILQQFLIEAILICMIGGISGIMLSLIIGGIFNV------------------ 595

Query: 366 YFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
            F+           +   ++ + L+ ++  + PA+ A+ +DP   L+ +
Sbjct: 596 -FMTDFTMVFSTFSIVAAVLCSTLIGVIFGYMPAKNAAQLDPITALARE 643



>gi|48841130|ref|ZP_00298056.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Methanosarcina barkeri str. fusaro]
          Length = 408

 Score =  195 bits (496), Expect = 2e-48
 Identities = 63/416 (15%), Positives = 150/416 (36%), Gaps = 55/416 (13%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALD 83
            L S ++T+GI +G+A ++V  S    F +   + I +V  +  I A +QP   +    +
Sbjct: 23  KLRSALTTLGIVIGIAAVVVNASLGASFNQFFTDEISSVGSNFIIAASEQPNLFFDNEYN 82

Query: 84  HVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKA 143
            ++  PGI+  +P  + +G +   +  + + + GVN   ++    +      +       
Sbjct: 83  LMKNTPGISGVSPRKSMSGDLTYLSETKNVNIAGVNKDFQE----IQGLQMEEGTFLTDK 138

Query: 144 GEQQIIIGKGVADA---LKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQ------ 194
                ++G  +A+      +     V I     N         +    V GIL+      
Sbjct: 139 DSAAAVLGYDIANEEFSRNISHRSTVEIAFRQENGT-----VVKKSFKVKGILKNSKPTV 193

Query: 195 -LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL---------------V 238
                       IP++   + +                     +                
Sbjct: 194 VSEDSDYDLTVFIPVSTMNEMIGEKD-YGAFLAMADSPEKIRDISDDVDSRLARNFGVPE 252

Query: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298
           RD  +      Y+ +         +    + + + +  ++ + V    I++ +++ V ++
Sbjct: 253 RDIDDEDLKPYYVFNQEEVLEQTGKIGDALSSFLLVLALISLFVGSIGIMNIMLVTVTER 312

Query: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358
           + +I +++++G  +  I ++F+   ++   FG L G +IG + +  L   +         
Sbjct: 313 TREIGIMKSVGYSNSNILSLFLLESVMVSSFGGLVGTVIGGLGAYALEITL--------- 363

Query: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                       LP       +   +  ++L+ + A  YPAR+A+ ++P   L  +
Sbjct: 364 -----------KLPPVFPLALIEIGIAVSVLVGVTAGLYPARKAARMNPVDALRYE 408



>gi|23114561|ref|ZP_00099857.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Desulfitobacterium hafniense DCB-2]
          Length = 406

 Score =  195 bits (495), Expect = 3e-48
 Identities = 66/441 (14%), Positives = 150/441 (34%), Gaps = 62/441 (14%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M     + + LR     +      L S ++ +GI +GV  +I+ ++  NG  + +   I 
Sbjct: 1   MNFLELMKVSLRALYANK------LRSALTMLGIIIGVFAVIIMVAIANGATQSVTANIQ 54

Query: 61  AVVPHGEIEAVDQP------------WTNWQEALDHVQKV-PGIAAAAPYINFTGLVESG 107
            +  +  I +  Q              T   E +  V+     + A AP +N    V  G
Sbjct: 55  GLGSNLLIVSAGQSSFGGVRGGAGSANTLTMEDVAKVRAAGSAVKAVAPVVNTNAQVVYG 114

Query: 108 ANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVS 167
               +  V G   +     S   +  +     +     +  ++G  V + L         
Sbjct: 115 TGNTSTSVMGTTAEYADVRSIKIAQGRFITEEDITKSARVAVVGPTVVENLFGD------ 168

Query: 168 IMIPNSNPEHKLMQPKRVRLHVAGIL----QLSGQLDHSFAMIPLADAQQYLDMGSSVSG 223
               N++   K ++   +   V G+           +      P++  Q  L    SV  
Sbjct: 169 ---ANTDIIGKNIKLNNIPYQVVGVTVSQGSSGMTNNDDMIYAPISSVQSRLVGSKSVRQ 225

Query: 224 IALKMTDVFNANK----------LVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMY 273
           I ++        +          L         +   I S       M    Q +  ++ 
Sbjct: 226 IYIEAESAQLMTEAQDQVTYALQLAHKIQSGQENDFTITSQAEVLESMEEISQTMTLLLG 285

Query: 274 LAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLC 333
               + + V    +++ ++++V +++ +I + + +GA +G I   F+   ++  L G + 
Sbjct: 286 GIAGISLLVGGIGVMNIMLVSVTERTREIGIRKAIGAGEGDILFQFLIESVVLSLIGGML 345

Query: 334 GVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLL 393
           G+++G   SL  + +                      + + +    V      + L+ ++
Sbjct: 346 GILLGWGGSLVASRLFG--------------------VTTSVSLSSVGIAFGFSALIGIV 385

Query: 394 ASWYPARRASNIDPARVLSGQ 414
               PA++A+ ++P   L  +
Sbjct: 386 FGVVPAKKAAAMNPIEALRYE 406



>gi|15156928|gb|AAK87586.1|   AGR_C_3336p [Agrobacterium tumefaciens str. C58]
 gi|25518982|pir||A97579   hypothetical protein AGR_C_3336 [imported] - Agrobacterium
           tumefaciens (strain C58, Cereon)
 gi|15889120|ref|NP_354801.1|   hypothetical protein AGR_C_3336 [Agrobacterium tumefaciens str.
           C58]
          Length = 420

 Score =  194 bits (494), Expect = 3e-48
 Identities = 64/438 (14%), Positives = 150/438 (34%), Gaps = 60/438 (13%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
            P+         R   R     L S ++ +G+ +GVA +I  ++  NG   ++ + +  +
Sbjct: 17  HPMFFETSRLALRAISRNL---LRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRL 73

Query: 63  VPHGEIEAVDQPWT----------NWQEALDHVQKVPGIAAAAPYINFTG-LVESGANLR 111
             +       Q             + ++      ++ GI A AP    +   V  G    
Sbjct: 74  GTNMLFVRPGQFGPGRASTEAKRFDDRDVEAIRNQISGIRAVAPQNRSSAATVIFGGKNH 133

Query: 112 AIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIP 171
              V G             +  +       + G+   IIG+ V   L             
Sbjct: 134 QTSVIGTTNDYLIAQDWTIALGRDFQPAEDRGGQIGCIIGETVRQEL-----------FG 182

Query: 172 NSNPEHKLMQPKRVRLHVAGILQLSGQL-----DHSFAMIPLADAQQYLDMGSSVSGIAL 226
             NP  + ++   +   V G+L   GQ           ++PL   Q+ +   +++S I +
Sbjct: 183 AENPVGQTIRVSNISCPVIGVLARKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMV 242

Query: 227 KMTDVFNANKLVRDAGEVTN----------SYVYIKSWIGTYGYMYRDIQMIRAIMYLAM 276
              D  +  K+  D   +                +         M     ++  ++    
Sbjct: 243 SAQDGVSTAKVQSDLQNLLRERRRINIGREDDFTVNDMTQIASAMTGTTTLLTGLLGAVA 302

Query: 277 VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVI 336
            + + V    I++ ++++V +++ +I +   +GA +  +   F+   ++   FG + G++
Sbjct: 303 AVSLLVGGIGIMNIMLVSVTERTREIGIRLAIGALEKQVLTQFLVEAVMLSAFGGIVGIL 362

Query: 337 IGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASW 396
            G+ ++  +   +                     +P       +F     +  + ++  +
Sbjct: 363 TGLGLAYSVVSFLN--------------------VPFVTSPSIIFLAFAFSAAIGVIFGY 402

Query: 397 YPARRASNIDPARVLSGQ 414
           +PARRA+++ P   L  +
Sbjct: 403 FPARRAASLSPIEALRHE 420



>gi|16264103|ref|NP_436895.1|   hypothetical protein SMb20369 [Sinorhizobium meliloti 1021]
 gi|25502385|pir||C95886   conserved hypothetical protein [imported] - Sinorhizobium meliloti
           (strain 1021) magaplasmid pSymB
 gi|15140228|emb|CAC48755.1|   CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
          Length = 413

 Score =  194 bits (494), Expect = 3e-48
 Identities = 85/437 (19%), Positives = 170/437 (38%), Gaps = 52/437 (11%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M L   I L    GR R  +V++I V   +G ++ +A L      M G + +   +++  
Sbjct: 1   MRLIFDIALTHVAGRGRQTLVAVIGVAVGVGFSIAMAAL------MQGGQDDFVRQLVDT 54

Query: 63  VPHGEIEAVDQ--------------------PWTNWQEALDHVQKVPGIAAAAP-----Y 97
           +PH ++    +                    P  + +  ++  +    +    P      
Sbjct: 55  MPHVDVTDEQRSARRQPAEDLFEAVAISGLRPRDDRRGIINPTKAASWLEEWMPGRLAAV 114

Query: 98  INFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADA 157
           +N  G++          V G+ P++E ++S +    +  ++    AG   ++IG  +A  
Sbjct: 115 LNVQGVIRYSGREVGAVVIGIEPEKEVKVSHIVEDFESGSFAALAAGGNNVVIGDTMASR 174

Query: 158 LKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQL-DHSFAMIPLADAQQYLD 216
           L    GD ++ +                   + G+        D   A + L +AQ   +
Sbjct: 175 LGAGLGDTITAVSSEGLA---------RNFKIVGLFHTGTTARDEGEAYVLLKNAQILSN 225

Query: 217 MGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM 276
             ++++ I +K+ D   A  + R             +W      +   + +   IMY  +
Sbjct: 226 RPNAINEIRIKLDDPNAAPTIARRVEAEL--GYKTVAWQEANESILEALVVRNVIMYTVV 283

Query: 277 VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVI 336
             ++ VA F I + +     +K+ DIA++++LG     +R +FV  GL  G+ GSL G  
Sbjct: 284 AAIMLVAGFGIFNIVSTITHEKARDIAIMKSLGFSQADMRRLFVMEGLAIGIAGSLLGWA 343

Query: 337 IGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASW 396
           +G  ++  L+ +   I          +    +  LP     L        AL  + +A +
Sbjct: 344 LGFAITYALSRVRFEIA---------ATGQEMTRLPIAWSILHYAVATAFALSSAAVAGY 394

Query: 397 YPARRASNIDPARVLSG 413
            PARRA+ ++P  ++ G
Sbjct: 395 LPARRAARVNPVDIIRG 411



>gi|21685503|emb|CAD30167.1|   putative ABC-transporter permease protein [Bacillus thuringiensis
           serovar israelensis]
          Length = 399

 Score =  194 bits (494), Expect = 3e-48
 Identities = 63/437 (14%), Positives = 162/437 (37%), Gaps = 61/437 (13%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M++  S+ I L      +      L S ++ +GI +GV  +I  ++   G E  L ++ +
Sbjct: 1   MSLLDSIKIALSSILAHK------LRSALTMLGIIIGVGSIITVVAIGQGGEAALKSQFV 54

Query: 61  AVVPHGEIEAVDQPWTN------------WQEALDHVQKVPGIAAAAPYINFTGLVESGA 108
                           +             +E +  ++K+P IA      +    ++   
Sbjct: 55  GSGNQTVPIHYSPDINDPFGMDMAEAPKITEEDIFELKKIPEIAHIVTTNSSMESLDIED 114

Query: 109 NLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSI 168
               + + G++ +            +     +   G   ++I K + +            
Sbjct: 115 KKEMVNITGLDNEYFTVNKVKVLKGRSLQESDVDQGNNVVMISKQMKEK----------- 163

Query: 169 MIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDH---SFAMIPLADAQQYLDMGSSVSGIA 225
           +  ++NP  K+++ K   + + G+ +   +      S A++P++           +  I+
Sbjct: 164 VFKDANPVGKIIEVKGQPMQIIGVYKSDNKFMGMGPSEALVPISLWPTLYGK-DEIQNIS 222

Query: 226 LKMTDVFNANKLVRDAGEVTNSY--------VYIKSWIGTYGYMYRDIQMIRAIMYLAMV 277
           ++  +V +  +  + A +V NS           + +       + +   ++  I+     
Sbjct: 223 VQAKNVDHLEQAGKKAADVLNSRKPSDATGKYEVVNLKEIQEGISKMTGIMTMIIGGIAG 282

Query: 278 LVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVII 337
           + + V    +++ ++++V +++ +I V + LGA    I   F+   ++  L G L G+ +
Sbjct: 283 ISLVVGGIGVMNIMLVSVTERTREIGVRKALGATRSKILLQFLIEAVMLTLLGGLIGIGL 342

Query: 338 GVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWY 397
           G   +  ++   +W                    P  + W  V   ++ ++ L ++    
Sbjct: 343 GYGGAYIVSTFAKW--------------------PPLVSWEVVVGGVLFSMTLGIIFGLI 382

Query: 398 PARRASNIDPARVLSGQ 414
           PA +A+ +DP   L  +
Sbjct: 383 PANKAAKLDPIEALRYE 399



>gi|52841086|ref|YP_094885.1|   ABC transporter, permease protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54296871|ref|YP_123240.1|   hypothetical protein lpp0912 [Legionella pneumophila str. Paris]
 gi|52628197|gb|AAU26938.1|   ABC transporter, permease protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750656|emb|CAH12063.1|   hypothetical protein [Legionella pneumophila str. Paris]
          Length = 416

 Score =  194 bits (493), Expect = 5e-48
 Identities = 86/440 (19%), Positives = 176/440 (40%), Gaps = 56/440 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M L L I L+    R+R       S++S +GI LGVA  +   S M G E++   R++  
Sbjct: 1   MKLFLKIALKHLLARKRQ------SLVSLMGIVLGVAFFLTISSLMQGSEKDFIKRLVDN 54

Query: 63  VPHGEIE----------------------------AVDQPWTNWQEALDHVQKVPGIAAA 94
            PH  I                                +    +++ ++++         
Sbjct: 55  SPHITIIDEYRNPRIQPIQQLHTHGAIEIRSVKPLTEPRGIRGYEQTINNLSLTIPGIVI 114

Query: 95  APYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGV 154
           +P +    L+       ++ + G+ P++ +++S + +++   +  +       I++G  +
Sbjct: 115 SPVLIGQALISYAGKDYSVTLNGMIPEEIKKVSTIENYMTSGSIDDLIVNPDGIVLGSEL 174

Query: 155 ADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQ 213
              L + + D +++  PN          +     + G+ +      D + A I +  AQ 
Sbjct: 175 LRKLSLTKDDNITVTAPNG---------QIRTFKILGVFRTGRSDFDTNQAFISIKRAQA 225

Query: 214 YLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMY 273
            L+  +  + I +K+ + + A  +     +         SW      +   + +   IMY
Sbjct: 226 LLNRPNRSNNIIIKLPNPYQAYDIAAQIEKQI--GYKTISWQEKSEDLLNTLVIRNIIMY 283

Query: 274 LAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLC 333
             +  V+ VA F I + +   V +K  DIA+L+++G +   I+ IF+  G L GL G L 
Sbjct: 284 SVVSAVLIVAAFGIYNVISTVVMEKHRDIAILKSIGFQKHDIQFIFIIEGFLLGLVGCLL 343

Query: 334 GVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLL 393
           G+ +G  +   L  +          QF       +  +P +  +L        A+  S++
Sbjct: 344 GLPLGSGLMYSLMQV----------QFKPPGSSELINMPLDWSYLQFVIATAFAMSASII 393

Query: 394 ASWYPARRASNIDPARVLSG 413
           A+  PA +A+ + P  +L G
Sbjct: 394 AAVLPAHKAALVHPVDILRG 413



>gi|48844871|ref|ZP_00299165.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Geobacter metallireducens GS-15]
          Length = 409

 Score =  194 bits (492), Expect = 6e-48
 Identities = 69/440 (15%), Positives = 172/440 (39%), Gaps = 68/440 (15%)

Query: 6   SLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPH 65
           SLLI LR  R      +  + ++++ +GI +G+A +I  ++   G  + ++++I ++  +
Sbjct: 7   SLLIALRALR------VNKMRALLTMLGIIIGIAAVIAMVAIGAGASKMISDQISSIGSN 60

Query: 66  GEIEAVDQ-------------PWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRA 112
             +                  P   + +A     + P +   AP +  +  +  G    +
Sbjct: 61  LLLVLPGSTTSGGLRTGAGGTPTLTYDDARAIKAECPSVENVAPTVRGSAQIVYGNQNWS 120

Query: 113 IQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPN 172
             V G  P+         +  +  +  +     +  +IG+ VA+ L             +
Sbjct: 121 TIVMGCTPEMVVVRDWSLTTGRNISLSDVDGATKNCLIGQTVAENL-----------FGD 169

Query: 173 SNPEHKLMQPKRVRLHVAGILQLSGQLD-----HSFAMIPLADAQQYL---DMGSSVSGI 224
           ++P  K+++ K++   V GIL   GQ            +PL  AQ+ L      ++V  +
Sbjct: 170 ADPIGKIIRIKKIPFTVIGILDHKGQSPQGTDQDDVIFVPLRTAQRKLFGSQFPNTVGAM 229

Query: 225 ALKMTDVFNANKLVRDAGEVTNS----------YVYIKSWIGTYGYMYRDIQMIRAIMYL 274
            ++        K   +   + +              +++         +  +++  ++  
Sbjct: 230 MIQAKSADVLKKAEEEVTALLDQRHRIGPSRERDFTVRNLSEILAVSEQSSKVMSILLGA 289

Query: 275 AMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG 334
              + + V    I++ ++++V +++ +I +   +GAK   I   F+   +L    G + G
Sbjct: 290 VASISLVVGGIGIMNIMLVSVTERTREIGIRMAIGAKQRDILLQFLTEAVLLTTAGGIIG 349

Query: 335 VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLA 394
           + +GV  ++ ++ I++W                    P+ +    +    + +  + +  
Sbjct: 350 MGLGVAGAMAVSKIMQW--------------------PTLISTQAIIIAFLFSAGVGVFF 389

Query: 395 SWYPARRASNIDPARVLSGQ 414
            +YPAR+A+N++P   L  +
Sbjct: 390 GFYPARKAANLNPIEALRYE 409



>gi|52008079|ref|ZP_00335456.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Thiobacillus denitrificans ATCC 25259]
          Length = 400

 Score =  194 bits (492), Expect = 6e-48
 Identities = 60/431 (13%), Positives = 155/431 (35%), Gaps = 55/431 (12%)

Query: 8   LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 67
           ++        R      + S ++ +GI +GVA +++ ++  NG  R ++++I ++  +  
Sbjct: 1   MLWNTLLLALRAIRRNLMRSFLTVLGIVIGVAAVVIMVTLGNGATRSVSDQISSMGSNLL 60

Query: 68  IEAVDQPWTNWQEALDHVQ---------KVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
           +    Q +    EA  + +         ++    A AP ++ +          +  V G 
Sbjct: 61  MVRPGQRYGPGAEAAPNFKLADAEAIRNQISAAEAVAPVVSMSVTAVYQVRNWSTVVTGS 120

Query: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
           N       +   +  +       +AG+   +IG+ V + L               NP   
Sbjct: 121 NNDYFAAGNWEIAAGRSFNDAEERAGKAVCVIGESVREKL-----------FGGQNPVGS 169

Query: 179 LMQPKRVRLHVAGILQLSGQL-----DHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFN 233
            ++ K+    V G+L+  GQ           ++PL   Q+ L     V+ +++ +    +
Sbjct: 170 DIRIKQFSCEVIGLLKPKGQSAMGSDQDDTIVMPLRTVQRRLAGSQDVNRLSVSVRAGAS 229

Query: 234 AN----------KLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVA 283
            +          +  R   +       +         +    +++  ++     + + V 
Sbjct: 230 IDVAKDQLTLLLRERRGIADNEEDDFRVMDTRQIAETLTGTTRVLTMLLGAVAAVSLLVG 289

Query: 284 CFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSL 343
              I++ ++++V +++ +I +   +GA +  +   F+   ++    G L G+ I    S+
Sbjct: 290 GIGIMNIMLVSVTERTREIGIRLAIGALEREVLLQFLIEAVVLASLGGLVGIAIATATSI 349

Query: 344 QLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRAS 403
            L  ++  +                                  +  + ++  ++PARRA+
Sbjct: 350 FLAGMMGILY--------------------LFDPAINLLSFFFSAAIGVVFGYFPARRAA 389

Query: 404 NIDPARVLSGQ 414
            ++P   L  +
Sbjct: 390 GLNPIDALRHE 400



>gi|54293825|ref|YP_126240.1|   hypothetical protein lpl0881 [Legionella pneumophila str. Lens]
 gi|53753657|emb|CAH15115.1|   hypothetical protein [Legionella pneumophila str. Lens]
          Length = 416

 Score =  193 bits (491), Expect = 7e-48
 Identities = 86/440 (19%), Positives = 176/440 (40%), Gaps = 56/440 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M L L I L+    R+R       S++S +GI LGVA  +   S M G E++   R++  
Sbjct: 1   MKLFLKIALKHLLARKRQ------SLVSLMGIVLGVAFFLTISSLMQGAEKDFIKRLVDN 54

Query: 63  VPHGEIE----------------------------AVDQPWTNWQEALDHVQKVPGIAAA 94
            PH  I                                +    +++ ++++         
Sbjct: 55  SPHITIIDEYRNPRIQPIQQLHTHGAIEIRSVKPLTEPRGIRGYEQTINNISLTIPGIVI 114

Query: 95  APYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGV 154
           +P +    L+       ++ + G+ P++ +++S + +++   +  +       I++G  +
Sbjct: 115 SPVLIGQALISYAGKDYSVTLNGMIPEEIKKVSTIENYMTSGSIDDLIVNPDGIVLGSEL 174

Query: 155 ADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQQ 213
              L + + D +++  PN          +     + G+ +      D + A I +  AQ 
Sbjct: 175 LRKLSLTKDDNITVTAPNG---------QIRTFKILGVFRTGRSDFDTNQAFISIKRAQA 225

Query: 214 YLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMY 273
            L+  +  + I +K+ + + A  +     +         SW      +   + +   IMY
Sbjct: 226 LLNRPNRSNNIIIKLPNPYQAYDIASQIEKQI--GYKTISWQEKSEDLLNTLVIRNIIMY 283

Query: 274 LAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLC 333
             +  V+ VA F I + +   V +K  DIA+L+++G +   I+ IF+  G L GL G L 
Sbjct: 284 SVVSAVLIVAAFGIYNVISTVVMEKHRDIAILKSIGFQKHDIQFIFIIEGFLLGLVGCLL 343

Query: 334 GVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLL 393
           G+ +G  +   L  +          QF       +  +P +  +L        A+  S++
Sbjct: 344 GLPLGSGLMYSLMQV----------QFKPPGSSELINMPLDWSYLQFVIATAFAMSASMI 393

Query: 394 ASWYPARRASNIDPARVLSG 413
           A+  PA +A+ + P  +L G
Sbjct: 394 AAVLPAHKAALVHPVDILRG 413



>gi|45358434|ref|NP_987991.1|   hypothetical protein MMP0871 [Methanococcus maripaludis S2]
 gi|44921192|emb|CAF30427.1|   conserved hypothetical membrane protein [Methanococcus maripaludis
           S2]
          Length = 397

 Score =  193 bits (491), Expect = 7e-48
 Identities = 61/417 (14%), Positives = 154/417 (36%), Gaps = 45/417 (10%)

Query: 15  RGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQP 74
              R        S ++ IG+ +G+  ++  +S   G +  + + I  +  +       Q 
Sbjct: 9   FAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVLPSQN 68

Query: 75  W-------TNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRL- 126
           +             +  V+ V G+         +  +E         V  + P +   + 
Sbjct: 69  FGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSKFTHVY 128

Query: 127 SALPSFVQGDAWRNFKAGEQQIIIGKGVADALK---VKQGDWVSIMIPNSNPEHKLMQPK 183
           S    +          + +   +IG  +A       +  GD ++I               
Sbjct: 129 SKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIGDKITI--------------N 174

Query: 184 RVRLHVAGILQLSGQL-DHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAG 242
             +  V GIL+ +G     +  ++     ++  ++ +  + + + +    + N +  +  
Sbjct: 175 DKKYKVIGILEETGNPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEIK 234

Query: 243 EVTNS-----YVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKD 297
           +            + +       +    +++   +     + + V    I +T+ M++ +
Sbjct: 235 DELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILE 294

Query: 298 KSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIG 357
           +  DI +L+ LGA++  I +IFV      GLFG + G ++G++++  +  I         
Sbjct: 295 RRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYI--------- 345

Query: 358 HQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                + I     + + + W  +  VLV + ++ +L+ ++PAR  + ++P   L G+
Sbjct: 346 -----AAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397



>gi|41720646|ref|ZP_00149459.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Methanococcoides burtonii DSM 6242]
          Length = 404

 Score =  192 bits (489), Expect = 1e-47
 Identities = 67/411 (16%), Positives = 147/411 (35%), Gaps = 45/411 (10%)

Query: 23  VSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEAL 82
             L S ++T+GI +GVA +I  +S    F +  +  I  +  +    + ++P T +   L
Sbjct: 18  SKLRSTLTTLGIVIGVAAVIANVSLGASFNQYFDEEIGTIGSNFIYVSANEPNTFFDNEL 77

Query: 83  DHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFK 142
           + V+K PG+  A+P       V   ++ R + + GV    ++    + +    +      
Sbjct: 78  EVVRKTPGVLRASPINEQVAEVTYMSDSRRVSITGVTGDYDE----VANIGLSEGNFIKD 133

Query: 143 AGEQQIIIGKGVAD-----ALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSG 197
             +   +IG  V++      L  K    ++    +     +  Q K +           G
Sbjct: 134 NDQYVAVIGYDVSEDTFDRKLSNKNSIEINFRTRDGEEITQTFQVKGIVQKSEPSFISGG 193

Query: 198 QLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLV---------------RDAG 242
            +      IP+    + L +    S I  +   +    +                 RD  
Sbjct: 194 MVPDKRIFIPIPTMNEILSVSD-YSTIFAEGESIETVTETSGEIDKRLGRYMGISSRDME 252

Query: 243 EVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDI 302
           E      +I                +  ++     + + V    I++ +++ V +++ +I
Sbjct: 253 EDDIKPYFIMDQQELLENAGSLSSALSRLLTAVAFISLVVGSIGIMNIMLVTVTERTSEI 312

Query: 303 AVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLS 362
            +++++G  +  +  +F+    + G  G + GVI+G   +      +             
Sbjct: 313 GLMKSIGYSNFDVLTMFIVESAVVGTIGGILGVILGCAGAYGAATFMN------------ 360

Query: 363 SDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSG 413
                   LP  L    +F   V ++ + L+A  YPA +A+ + P   L  
Sbjct: 361 --------LPVVLPASKIFAGFVVSIFVGLIAGAYPANKAAKMKPVDALRH 403



>gi|20089338|ref|NP_615413.1|   hypothetical protein MA0447 [Methanosarcina acetivorans C2A]
 gi|19914229|gb|AAM03893.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 403

 Score =  192 bits (487), Expect = 2e-47
 Identities = 66/415 (15%), Positives = 144/415 (34%), Gaps = 54/415 (13%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALD 83
            + S ++ +GI +GVA +I  +S    F +   N +  +  +       QP   +   L 
Sbjct: 19  KMRSTLTVLGIVIGVAAVIANVSLGASFNQHFTNEVSNLGSNFIYIQGMQPKLFYDNQLK 78

Query: 84  HVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKA 143
            V+  PGI+  +P  +    V   +  ++I V GV    ++    + +   G        
Sbjct: 79  IVENTPGISGVSPLKSQAAEVTYMSETKSIMVSGVGEAYDE----VANTQIGKGTFINDN 134

Query: 144 GEQQIIIGKGVADALK---VKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQ-- 198
                I+G  +A+      +   + + +       E            V GI+Q      
Sbjct: 135 DRYVAIVGYDIANEKFGRNLSVRNSIDMTFRVGEDEKI-----TKTFKVKGIIQNPENTM 189

Query: 199 ----LDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIK-- 252
                D+   +IP+    + L       G+     D     +   +          I   
Sbjct: 190 VQAYNDNEAILIPIDVMNEILGEKD-YGGVFAMAEDPAAIQETSDEVDRRLARSFGISER 248

Query: 253 -------------SWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS 299
                        +              + + +    ++ + V    I++ ++++V +++
Sbjct: 249 ELDDKDSRPYMLVNQAEILEQTDMMAAALSSFLTAVALISLLVGSIGIMNIMLVSVTERT 308

Query: 300 GDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQ 359
            +I VL++LG     I  +F+   +L G+FG + G  +G+  +  +  ++          
Sbjct: 309 REIGVLKSLGFTGFDILFLFMVESILLGVFGGILGGAVGIAGAYSVESLLN--------- 359

Query: 360 FLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                      LP       +F   + A+ +  ++  YPAR+A+ + P   L  +
Sbjct: 360 -----------LPVVFPLSLIFAGFIVAVAVGFVSGVYPARKAAKMKPVDSLRYE 403



>gi|2982995|gb|AAC06608.1|   hypothetical protein [Aquifex aeolicus VF5]
 gi|15605828|ref|NP_213205.1|   hypothetical protein aq_296 [Aquifex aeolicus VF5]
 gi|7514504|pir||A70327   conserved hypothetical protein aq_296 - Aquifex aeolicus
          Length = 416

 Score =  192 bits (487), Expect = 2e-47
 Identities = 92/441 (20%), Positives = 167/441 (37%), Gaps = 57/441 (12%)

Query: 3   MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 62
           M   L +  +F   R+R       S I+T+G+ +G    IV  S +NGF++      L +
Sbjct: 1   MRAVLFLSFKFFVERKRQ------SFIATLGVMIGTTAYIVMSSMVNGFQKYFLEEALNI 54

Query: 63  VPHGEIEA----------------------------VDQPWTNWQEALDHVQKVPGIAAA 94
             H +I                                    N++E L    +   +   
Sbjct: 55  NGHVKIFVEAREKGESFLKKFFPDKNFKILGEKPEETKDKIANYREILRKYSQDKNVIGI 114

Query: 95  APYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGV 154
             ++   G++  G   +     G+ P+ E +   +  ++Q       +  +  +I+G  +
Sbjct: 115 TVHLIGNGVLTYGVKEKPATFVGIIPKLEDKTLNVSKYLQEGRLNELERNKDYVILGIKL 174

Query: 155 ADALKVKQ-GDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLS-GQLDHSFAMIPLADAQ 212
           A  L +++ G  V +  P+             RL V   L     ++D S   + +   Q
Sbjct: 175 AQELGIRETGKKVLLYAPSGEVY---------RLKVIDFLNTGITEIDKSRIYLHIKKLQ 225

Query: 213 QYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIM 272
             L+    V+ + LK+ D   A          T      +SW  ++       ++ + I 
Sbjct: 226 DILERQGEVNEVVLKLKDPDLAPFYAEKLSRET--GYKAESWQESFKNFLSIFKIQKIIT 283

Query: 273 YLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSL 332
              +  ++ V+ F I + ++M V +K  +IA+L+ +G +   +  IF   GL+ GL G +
Sbjct: 284 RSVVFSILLVSGFGIFNIIMMTVMEKRREIAILKAMGYEKRDLILIFTLQGLIIGLLGGI 343

Query: 333 CGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL 392
            G I+   +   L  +   +E +I  +    D                F+  V ALL S 
Sbjct: 344 LGNILAYGMLEWLETLRIEVEGIIRAKGFILDR----------SLWYHFFGFVFALLTSY 393

Query: 393 LASWYPARRASNIDPARVLSG 413
           LAS+YPA RAS   P  V   
Sbjct: 394 LASFYPAYRASKFHPVEVFRS 414



>gi|21227053|ref|NP_632975.1|   ABC transporter, permease protein [Methanosarcina mazei Go1]
 gi|20905377|gb|AAM30647.1|   ABC transporter, permease protein [Methanosarcina mazei Goe1]
          Length = 404

 Score =  192 bits (487), Expect = 2e-47
 Identities = 64/414 (15%), Positives = 150/414 (36%), Gaps = 51/414 (12%)

Query: 24  SLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALD 83
            L S ++T+GI +GVA +I+  S    F +   + + +V  +  I   DQP   +   L+
Sbjct: 19  KLRSALTTLGIVIGVAAVIINASLGASFNQFFTDEVSSVGSNFIIAYSDQPNLFYDSELE 78

Query: 84  HVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKA 143
            ++  PGI   +P    +G +   ++++++ + GVN   ++              ++   
Sbjct: 79  IIKNTPGILGVSPRKTVSGEINYLSDVKSVSIVGVNGDFQEIQGIKMEEGSFLTDKDI-- 136

Query: 144 GEQQIIIGKGVADA-LKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQ---- 198
                ++G  +A            S+ I     +  L+     +  V GIL+ S +    
Sbjct: 137 --YSAVLGYDLAKEEFGRSISHRSSVDIAFRQEDGTLVI---KKFKVKGILEDSKETIVG 191

Query: 199 ---LDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTN--------- 246
                     IP++   +                   N   + +D  +            
Sbjct: 192 GDGSTDMIVYIPISTMNEMTGEKD-YGAFFAMAESSENIGSISKDVDKRLARSFGISERD 250

Query: 247 ------SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG 300
                     +              + +   + +  ++ + V    I++ +++ V +++ 
Sbjct: 251 LNNEDAKPYTVFDQADVLEETGALGKALSTFLLVLALISLFVGSIGIMNIMLVTVTERTR 310

Query: 301 DIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQF 360
           +I +++++G     I ++F+   ++    G L G  IG   +  L   +           
Sbjct: 311 EIGIMKSVGYSSSNILSLFLLESIMVSSLGGLLGTAIGGFGAYILEEAL----------- 359

Query: 361 LSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
                     LP    +  +   ++ ++L+ + A  YPAR+A+N++P   L  +
Sbjct: 360 ---------KLPPVFPFKLIEIGILISVLVGVGAGLYPARKAANMNPVDALRYE 404



>gi|23128707|ref|ZP_00110547.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Nostoc punctiforme PCC 73102]
          Length = 405

 Score =  190 bits (483), Expect = 6e-47
 Identities = 70/426 (16%), Positives = 147/426 (34%), Gaps = 59/426 (13%)

Query: 16  GRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPW 75
             +      L S ++ +GI +G A +I  +    G ++ +N ++ ++ P+          
Sbjct: 10  AGKTLLSNKLRSALTMLGIVIGNASVIAMIGIGEGGQKYVNKQLESLGPNVLFILPGNRE 69

Query: 76  TNW-----------QEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQ 124
           T             Q+A     +VP +   AP +N   +V        + + G  P    
Sbjct: 70  TQRISFEVPKNLVLQDAEAIASQVPTVVGVAPELNRRQVVTYSNRNTDVNIIGTTPSFLS 129

Query: 125 RLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKR 184
                 +  +  +  + K   Q +++G  +A+ L             NSN   K ++   
Sbjct: 130 VRDFETAKGRFFSEVDIKRSNQVVVLGGDLAEKL-----------FGNSNAIGKQLRIGN 178

Query: 185 VRLHVAGILQLSGQL----DHSFAMIPLADAQQYLDMGSSVSGIAL-----KMTDVFNAN 235
               V G L   G          A+IP+  +   L   +S  GIAL        D  + +
Sbjct: 179 TSFQVIGTLTAKGSSVGADYDDAALIPITTSANRLVGKNSPYGIALDYLVAAARDSESVD 238

Query: 236 KLVRDAGEVTN--------SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNI 287
                   +              I+S       + +    +  ++     + + V    I
Sbjct: 239 AAEFQIANLLRLRHKINGEDDFTIRSQKDALQTVGQITGALTIMLAAIAGISLFVGGIGI 298

Query: 288 VSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTP 347
           ++ ++++V +++ +I + + +GA +  I   F+   ++    G L G  +G+   L +  
Sbjct: 299 MNIMLVSVTERTQEIGLRKAIGATEQDILLQFIIEAVIVSAAGGLVGTAVGISGILLVGA 358

Query: 348 IIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDP 407
           +                      L + L  + +   +  +  + L     PARRA+ +DP
Sbjct: 359 LTP--------------------LEAALSPVAITMAVGVSGGIGLFFGVVPARRAAKLDP 398

Query: 408 ARVLSG 413
              L  
Sbjct: 399 IVALRS 404



>gi|17935707|ref|NP_532497.1|   hypothetical protein Atu1817 [Agrobacterium tumefaciens str. C58]
 gi|17740259|gb|AAL42813.1|   conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
 gi|25523278|pir||AG2799   conserved hypothetical protein Atu1817 [imported] - Agrobacterium
           tumefaciens (strain C58, Dupont)
          Length = 402

 Score =  190 bits (482), Expect = 7e-47
 Identities = 62/423 (14%), Positives = 147/423 (34%), Gaps = 57/423 (13%)

Query: 18  RRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWT- 76
           R      L S ++ +G+ +GVA +I  ++  NG   ++ + +  +  +       Q    
Sbjct: 11  RAISRNLLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRLGTNMLFVRPGQFGPG 70

Query: 77  ---------NWQEALDHVQKVPGIAAAAPYINFTG-LVESGANLRAIQVKGVNPQQEQRL 126
                    + ++      ++ GI A AP    +   V  G       V G         
Sbjct: 71  RASTEAKRFDDRDVEAIRNQISGIRAVAPQNRSSAATVIFGGKNHQTSVIGTTNDYLIAQ 130

Query: 127 SALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVR 186
               +  +       + G+   IIG+ V   L               NP  + ++   + 
Sbjct: 131 DWTIALGRDFQPAEDRGGQIGCIIGETVRQEL-----------FGAENPVGQTIRVSNIS 179

Query: 187 LHVAGILQLSGQL-----DHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 241
             V G+L   GQ           ++PL   Q+ +   +++S I +   D  +  K+  D 
Sbjct: 180 CPVIGVLARKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTAKVQSDL 239

Query: 242 GEVTN----------SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTL 291
             +                +         M     ++  ++     + + V    I++ +
Sbjct: 240 QNLLRERRRINIGREDDFTVNDMTQIASAMTGTTTLLTGLLGAVAAVSLLVGGIGIMNIM 299

Query: 292 VMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEW 351
           +++V +++ +I +   +GA +  +   F+   ++   FG + G++ G+ ++  +   +  
Sbjct: 300 LVSVTERTREIGIRLAIGALEKQVLTQFLVEAVMLSAFGGIVGILTGLGLAYSVVSFLN- 358

Query: 352 IEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
                              +P       +F     +  + ++  ++PARRA+++ P   L
Sbjct: 359 -------------------VPFVTSPSIIFLAFAFSAAIGVIFGYFPARRAASLSPIEAL 399

Query: 412 SGQ 414
             +
Sbjct: 400 RHE 402



>gi|47565256|ref|ZP_00236298.1|   ABC transporter, ATP-binding protein [Bacillus cereus G9241]
 gi|47557610|gb|EAL15936.1|   ABC transporter, ATP-binding protein [Bacillus cereus G9241]
          Length = 403

 Score =  190 bits (482), Expect = 8e-47
 Identities = 65/437 (14%), Positives = 160/437 (36%), Gaps = 57/437 (13%)

Query: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
           M++  S+ I L      +      L S ++ +GI +GV  +I  ++   G E  L ++ +
Sbjct: 1   MSLLDSMKIALSSILAHK------LRSALTMLGIIIGVGSIITVVAIGQGGEAALKSQFV 54

Query: 61  AVVPHGEIEAVDQPWTN------------WQEALDHVQKVPGIAAAAPYINFTGLVESGA 108
                           +             +E +  ++K+P I+      +    ++   
Sbjct: 55  GSGNQTVPIHYSADMNDPFGMGMVEAPKITEEDIFEIKKIPEISHVVTTNSSMEPLDIED 114

Query: 109 NLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSI 168
               + + G++ +            +     +   G   ++I K + +            
Sbjct: 115 KKEMVNITGLDSEYFAVNKVNLLKGRSLQESDVDQGNNVVMISKKMEEN----------- 163

Query: 169 MIPNSNPEHKLMQPKRVRLHVAGILQLSGQL---DHSFAMIPLADAQQYLDMGSSVSGIA 225
           M  + NP  K+++ K   + + G+     +    + S A++P++           +  I+
Sbjct: 164 MFADVNPVGKIIEMKGQPMQIIGVYNSDNEFMEMESSEALVPISLWPTLYGK-DEIQDIS 222

Query: 226 LKMTDVFNANKLVRDAGEVTNSY--------VYIKSWIGTYGYMYRDIQMIRAIMYLAMV 277
           ++  +V +  +  + A +V NS           + +       + +   ++  I+     
Sbjct: 223 VQAKNVDHLEQAGKKAADVLNSRKPSDATGKYEVMNLKEIQEDISKMTGIMTKIIGGIAG 282

Query: 278 LVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVII 337
           + + V    +++ ++++V +++ +I V + LGA    I   F+   ++  L G L G+ I
Sbjct: 283 ISLVVGGIGVMNIMLVSVTERTREIGVRKELGATRSKILLQFLIEAVMLTLLGGLIGIGI 342

Query: 338 GVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWY 397
           G+ +      II                      P  + W  V   ++ ++ L ++    
Sbjct: 343 GIGIGYGGAYIISTFA----------------KWPPLVSWEIVVGGVLFSITLGIIFGLI 386

Query: 398 PARRASNIDPARVLSGQ 414
           PA +A+ +DP   L  +
Sbjct: 387 PANKAAKLDPIEALRYE 403



>gi|56751433|ref|YP_172134.1|   probable ABC transporter permease protein [Synechococcus elongatus
           PCC 6301]
 gi|56686392|dbj|BAD79614.1|   probable ABC transporter permease protein [Synechococcus elongatus
           PCC 6301]
          Length = 407

 Score =  190 bits (482), Expect = 8e-47
 Identities = 64/424 (15%), Positives = 139/424 (32%), Gaps = 59/424 (13%)

Query: 18  RRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWT- 76
           +      L S ++ +GI +G A +I  +    G +R  + +  ++ P+          T 
Sbjct: 14  KTLRANRLRSALTMLGIIIGNASVITMVGVGQGAQRLASEQFESLGPNVLFIVPGNQDTR 73

Query: 77  ----------NWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRL 126
                        +A+    +VP     AP ++   LV         QV GV P      
Sbjct: 74  RGGLDIPKTLVLADAVAIATQVPTAGEVAPQVSTRQLVTYQGESSTTQVFGVTPSFLTVR 133

Query: 127 SALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVR 186
           S   +  +  +  +    EQ  ++G  +A  L               NP    ++ K   
Sbjct: 134 SFSVARGRFFSDLDLSRAEQVAVLGSDLAIKL-----------FGVQNPVGASIRIKGAS 182

Query: 187 LHVAGILQLSGQL----DHSFAMIPLADAQQYL-----DMGSSVSGIALKMTDVFNANKL 237
             V G+++  G            +PL      +       G  VS I++   D  + +  
Sbjct: 183 FRVIGVMEPKGSFLGNNQDDAVYLPLTTVSSRILGTTSPYGIEVSFISVAAKDANSIDAA 242

Query: 238 VRDAGEVTN--------SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVS 289
                 +              ++S       +      +  ++     + + V    I++
Sbjct: 243 QFQITNLLRQRHRIIREDDFEVRSQKDVLTIVGTVTNGLTLMLSAIAGISLLVGGIGIMN 302

Query: 290 TLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPII 349
            ++++V +++ +I + + +GA    I   F+   ++  L G   G  +G+     +  + 
Sbjct: 303 IMLVSVSERTQEIGLRKAIGATQKDILNQFMIEAVILALLGGAIGTGLGITGVTAIALLT 362

Query: 350 EWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPAR 409
                                L + +  + +   +  +  + L     PAR+A+ +DP  
Sbjct: 363 P--------------------LKAGVSPVAIAITVTISSGIGLFFGVVPARQAARLDPIV 402

Query: 410 VLSG 413
            L  
Sbjct: 403 ALRS 406






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
    Posted date:  Apr 3, 2005  3:19 AM
  Number of letters in database: 819,463,594
  Number of sequences in database:  2,419,489
  
Lambda     K      H
   0.324    0.139    0.415 

Gapped
Lambda     K      H
   0.267   0.0421    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 388,361,005
Number of Sequences: 2419489
Number of extensions: 12728102
Number of successful extensions: 206548
Number of sequences better than 10.0: 5624
Number of HSP's better than 10.0 without gapping: 1853
Number of HSP's successfully gapped in prelim test: 3771
Number of HSP's that attempted gapping in prelim test: 194398
Number of HSP's gapped (non-prelim): 10778
length of query: 414
length of database: 819,463,594
effective HSP length: 130
effective length of query: 284
effective length of database: 504,930,024
effective search space: 143400126816
effective search space used: 143400126816
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 76 (33.8 bits)