BLASTP 2.2.10 [Oct-19-2004]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1112623465-20420-152914086424.BLASTQ2

Query= gi|2829636|sp|P75956|LOLC_ECOLI Lipoprotein releasing
system transmembrane protein lolC
         (399 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples 
           2,419,489 sequences; 819,463,594 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs



Results of PSI-Blast iteration 3

Skip to the first new sequence

Taxonomy reports

Legend:
 - means that the alignment score was below the threshold on the previous iteration 
 - means that the alignment was checked on the previous iteration 


Hit list size 
Sequences with E-value BETTER than threshold

                                                                     Score    E
Sequences producing significant alignments:                          (bits) Value


 gi|4062688|dbj|BAA35936.1|  Hypothetical protein HI1555 [Escheric...   340   6e-92 

 gi|26247260|ref|NP_753300.1|  Lipoprotein releasing system transm...   336   7e-91 

 gi|56479828|ref|NP_707031.2|  hypothetical protein SF1120 [Shigel...   333   6e-90 

 gi|29142137|ref|NP_805479.1|  ABC transporter integral membrane s...   332   1e-89 

 gi|56413797|ref|YP_150872.1|  ABC transporter integral membrane s...   332   1e-89 

 gi|39546312|ref|NP_460187.2|  integral membrane protein [Salmonel...   330   4e-89 

 gi|54309557|ref|YP_130577.1|  putative ABC transporter integral m...   322   1e-86 

 gi|9949086|gb|AAG06374.1|  conserved hypothetical protein [Pseudo...   315   2e-84 

 gi|53759518|ref|ZP_00172493.2|  COG4591: ABC-type transport syste...   312   1e-83 

 gi|28897751|ref|NP_797356.1|  hypothetical protein VP0977 [Vibrio...   312   1e-83 

 gi|9949088|gb|AAG06376.1|  conserved hypothetical protein [Pseudo...   311   2e-83 

 gi|48787803|ref|ZP_00283782.1|  COG4591: ABC-type transport syste...   310   6e-83 

 gi|46163958|ref|ZP_00136329.2|  COG4591: ABC-type transport syste...   309   9e-83 

 gi|28869314|ref|NP_791933.1|  lipoprotein releasing system transm...   309   1e-82 

 gi|53611016|ref|ZP_00342213.1|  COG4591: ABC-type transport syste...   309   1e-82 

 gi|28869312|ref|NP_791931.1|  lipoprotein releasing system transm...   308   2e-82 

 gi|17428130|emb|CAD14819.1|  PROBABLE LIPOPROTEIN RELEASING SYSTE...   307   4e-82 

 gi|26988878|ref|NP_744303.1|  lipoprotein releasing system, perme...   305   2e-81 

 gi|46321384|ref|ZP_00221761.1|  COG4591: ABC-type transport syste...   304   3e-81 

 gi|37526704|ref|NP_930048.1|  Lipoprotein releasing system transm...   304   3e-81 

 gi|46312127|ref|ZP_00212726.1|  COG4591: ABC-type transport syste...   304   4e-81 

 gi|23469022|ref|ZP_00124357.1|  COG4591: ABC-type transport syste...   303   6e-81 

 gi|46132427|ref|ZP_00170902.2|  COG4591: ABC-type transport syste...   303   6e-81 

 gi|37680547|ref|NP_935156.1|  putative ABC transporter integral m...   303   8e-81 

 gi|53719887|ref|YP_108873.1|  putative lipoprotein releasing syst...   302   2e-80 

 gi|59713645|ref|YP_206420.1|  lipoprotein releasing system transm...   302   2e-80 

 gi|50120753|ref|YP_049920.1|  lipoprotein releasing system transm...   301   3e-80 

 gi|53730437|ref|ZP_00348792.1|  COG4591: ABC-type transport syste...   300   6e-80 

 gi|50085711|ref|YP_047221.1|  transport protein of outer membrane...   300   6e-80 

 gi|48770765|ref|ZP_00275108.1|  COG4591: ABC-type transport syste...   297   4e-79 

 gi|34104273|gb|AAQ60632.1|  lipoprotein releasing system trasmemb...   295   1e-78 

 gi|53611014|ref|ZP_00342211.1|  COG4591: ABC-type transport syste...   295   1e-78 

 gi|47573590|ref|ZP_00243628.1|  COG4591: ABC-type transport syste...   295   2e-78 

 gi|22125679|ref|NP_669102.1|  hypothetical protein y1785 [Yersini...   295   2e-78 

 gi|51596764|ref|YP_070955.1|  ABC transporter/lipoprotein releasi...   295   2e-78 

 gi|52853542|ref|ZP_00145774.2|  COG4591: ABC-type transport syste...   293   5e-78 

 gi|26988880|ref|NP_744305.1|  lipoprotein releasing system, perme...   293   7e-78 

 gi|9656415|gb|AAF95032.1|  conserved hypothetical protein [Vibrio...   292   2e-77 

 gi|48730015|ref|ZP_00263764.1|  COG4591: ABC-type transport syste...   290   3e-77 

 gi|30249056|ref|NP_841126.1|  DUF214 [Nitrosomonas europaea ATCC ...   289   8e-77 

 gi|59801184|ref|YP_207896.1|  LolC [Neisseria gonorrhoeae FA 1090...   289   1e-76 

 gi|39935992|ref|NP_948268.1|  possible ABC type permease; lipopro...   288   2e-76 

 gi|7380062|emb|CAB84643.1|  putative integral membrane protein [N...   288   2e-76 

 gi|56707553|ref|YP_169449.1|  lipoprotein releasing system, subun...   287   4e-76 

 gi|7226474|gb|AAF41616.1|  conserved hypothetical protein [Neisse...   285   1e-75 

 gi|53756984|gb|AAU91275.1|  lipoprotein ABC transporter, permease...   285   2e-75 

 gi|46580780|ref|YP_011588.1|  lipoprotein releasing system, perme...   285   2e-75 

 gi|56478739|ref|YP_160328.1|  hypothetical protein ebA5819 [Azoar...   284   4e-75 

 gi|15602425|ref|NP_245497.1|  hypothetical protein PM0560 [Pasteu...   282   9e-75 

 gi|27379987|ref|NP_771516.1|  probable ABC transporter permease p...   282   9e-75 

 gi|39997368|ref|NP_953319.1|  ABC transporter, permease protein [...   282   1e-74 

 gi|46133408|ref|ZP_00203154.1|  COG4591: ABC-type transport syste...   281   2e-74 

 gi|16273448|ref|NP_439697.1|  hypothetical protein HI1548 [Haemop...   280   7e-74 

 gi|17983113|gb|AAL52320.1|  LIPOPROTEIN RELEASING SYSTEM TRANSMEM...   279   8e-74 

 gi|54298182|ref|YP_124551.1|  hypothetical protein lpp2239 [Legio...   279   8e-74 

 gi|23347634|gb|AAN29752.1|  ABC transporter, permease protein [Br...   279   9e-74 

 gi|48845381|ref|ZP_00299663.1|  COG4591: ABC-type transport syste...   279   1e-73 

 gi|54295131|ref|YP_127546.1|  hypothetical protein lpl2211 [Legio...   279   1e-73 

 gi|48764624|ref|ZP_00269175.1|  COG4591: ABC-type transport syste...   279   1e-73 

 gi|52842498|ref|YP_096297.1|  lipoprotein ABC transporter [Legion...   279   1e-73 

 gi|53729138|ref|ZP_00348325.1|  COG4591: ABC-type transport syste...   279   2e-73 

 gi|53732822|ref|ZP_00349581.1|  COG4591: ABC-type transport syste...   278   2e-73 

 gi|9656413|gb|AAF95030.1|  conserved hypothetical protein [Vibrio...   278   2e-73 

 gi|15892999|ref|NP_360713.1|  hypothetical protein RC1076 [Ricket...   278   3e-73 

 gi|56460624|ref|YP_155905.1|  ABC-type transport system, involved...   277   3e-73 

 gi|48730017|ref|ZP_00263766.1|  COG4591: ABC-type transport syste...   277   4e-73 

 gi|24373810|ref|NP_717853.1|  lipoprotein releasing system transm...   277   4e-73 

 gi|54032009|ref|ZP_00364141.1|  COG4591: ABC-type transport syste...   276   6e-73 

 gi|28897753|ref|NP_797358.1|  hypothetical protein VP0979 [Vibrio...   276   7e-73 

 gi|15837678|ref|NP_298366.1|  hypothetical protein XF1076 [Xylell...   275   1e-72 

 gi|53732829|ref|ZP_00349585.1|  COG4591: ABC-type transport syste...   275   1e-72 

 gi|46189140|ref|ZP_00205925.1|  COG4591: ABC-type transport syste...   275   2e-72 

 gi|16273455|ref|NP_439704.1|  hypothetical protein HI1555 [Haemop...   275   2e-72 

 gi|13471386|ref|NP_102952.1|  hypothetical protein mll1342 [Mesor...   274   3e-72 

 gi|42631611|ref|ZP_00157149.1|  COG4591: ABC-type transport syste...   274   3e-72 

 gi|48832907|ref|ZP_00289933.1|  COG4591: ABC-type transport syste...   274   3e-72 

 gi|23012408|ref|ZP_00052501.1|  COG4591: ABC-type transport syste...   273   5e-72 

 gi|22996851|ref|ZP_00041094.1|  COG4591: ABC-type transport syste...   272   1e-71 

 gi|28198273|ref|NP_778587.1|  lipoprotein releasing system transm...   272   1e-71 

 gi|58038567|ref|YP_190531.1|  Lipoprotein releasing system transm...   272   1e-71 

 gi|46312832|ref|ZP_00213425.1|  COG4591: ABC-type transport syste...   272   2e-71 

 gi|53732302|ref|ZP_00349453.1|  COG4591: ABC-type transport syste...   272   2e-71 

 gi|22995331|ref|ZP_00039809.1|  COG4591: ABC-type transport syste...   272   2e-71 

 gi|28262692|gb|EAA26196.1|  unknown [Rickettsia sibirica 246] >gi...   272   2e-71 

 gi|49474194|ref|YP_032236.1|  Lipoprotein releasing system transm...   272   2e-71 

 gi|52425242|ref|YP_088379.1|  hypothetical protein MS1187 [Mannhe...   272   2e-71 

 gi|50120755|ref|YP_049922.1|  lipoprotein releasing system transm...   271   3e-71 

 gi|45441566|ref|NP_993105.1|  lipoprotein releasing system, trans...   270   4e-71 

 gi|21231570|ref|NP_637487.1|  lipoprotein releasing system transm...   270   6e-71 

 gi|54309555|ref|YP_130575.1|  putative ABC transporter, integral ...   270   7e-71 

 gi|27361560|gb|AAO10468.1|  Conserved hypothetical protein [Vibri...   269   1e-70 

 gi|52007738|ref|ZP_00335115.1|  COG4591: ABC-type transport syste...   269   2e-70 

 gi|49475641|ref|YP_033682.1|  Lipoprotein releasing system transm...   268   2e-70 

 gi|56677757|gb|AAV94423.1|  lipoprotein releasing system transmem...   266   8e-70 

 gi|33592244|ref|NP_879888.1|  lipoprotein releasing system transm...   266   9e-70 

 gi|45915776|ref|ZP_00197222.1|  COG4591: ABC-type transport syste...   265   1e-69 

 gi|29654316|ref|NP_820008.1|  lipoprotein ABC transporter, permea...   265   2e-69 

 gi|15074219|emb|CAC45866.1|  HYPOTHETICAL TRANSMEMBRANE PROTEIN [...   264   4e-69 

 gi|17935189|ref|NP_531979.1|  ABC transporter, membrane spanning ...   264   4e-69 

 gi|21108306|gb|AAM36938.1|  lipoprotein releasing system transmem...   263   6e-69 

 gi|59713647|ref|YP_206422.1|  Lipoprotein releasing system transm...   263   7e-69 

 gi|23467309|ref|ZP_00122892.1|  COG4591: ABC-type transport syste...   261   2e-68 

 gi|32030057|ref|ZP_00132977.1|  COG4591: ABC-type transport syste...   261   2e-68 

 gi|48849475|ref|ZP_00303718.1|  COG4591: ABC-type transport syste...   261   2e-68 

 gi|51473878|ref|YP_067635.1|  hypothetical protein RT0694 [Ricket...   260   5e-68 

 gi|15602427|ref|NP_245499.1|  hypothetical protein PM0562 [Pasteu...   260   5e-68 

 gi|52699287|ref|ZP_00340695.1|  COG4591: ABC-type transport syste...   259   8e-68 

 gi|45441568|ref|NP_993107.1|  lipoprotein releasing system, trans...   259   9e-68 

 gi|16129081|ref|NP_415636.1|  putative kinase [Escherichia coli K...   259   9e-68 

 gi|51596762|ref|YP_070953.1|  ABC tranporter/lipoprotein releasin...   259   1e-67 

 gi|33601281|ref|NP_888841.1|  lipoprotein releasing system transm...   259   1e-67 

 gi|22959283|ref|ZP_00006937.1|  COG4591: ABC-type transport syste...   259   1e-67 

 gi|33596665|ref|NP_884308.1|  lipoprotein releasing system transm...   259   1e-67 

 gi|16126173|ref|NP_420737.1|  hypothetical protein CC1930 [Caulob...   259   2e-67 

 gi|53729136|ref|ZP_00134109.2|  COG4591: ABC-type transport syste...   258   2e-67 

 gi|24112523|ref|NP_707033.1|  putative kinase [Shigella flexneri ...   257   3e-67 

 gi|15604541|ref|NP_221059.1|  hypothetical protein RP699 [Rickett...   257   4e-67 

 gi|52425240|ref|YP_088377.1|  hypothetical protein MS1185 [Mannhe...   257   4e-67 

 gi|12514668|gb|AAG55864.1|  putative kinase [Escherichia coli O15...   257   4e-67 

 gi|26247262|ref|NP_753302.1|  Lipoprotein releasing system transm...   257   4e-67 

 gi|56460622|ref|YP_155903.1|  ABC-type transport system, involved...   257   4e-67 

 gi|37526702|ref|NP_930046.1|  Lipoprotein releasing system transm...   257   6e-67 

 gi|24373812|ref|NP_717855.1|  lipoprotein releasing system transm...   256   9e-67 

 gi|58581928|ref|YP_200944.1|  lipoprotein releasing system transm...   256   1e-66 

 gi|32030059|ref|ZP_00132979.1|  COG4591: ABC-type transport syste...   255   1e-66 

 gi|61100924|ref|ZP_00376381.1|  ABC-type transport system [Erythr...   254   3e-66 

 gi|57238817|ref|YP_179953.1|  putative lipoprotein releasing syst...   254   4e-66 

 gi|58416418|emb|CAI27531.1|  Lipoprotein releasing system transme...   254   5e-66 

 gi|37680545|ref|NP_935154.1|  putative ABC transporter, integral ...   252   1e-65 

 gi|52008723|ref|ZP_00336092.1|  COG4591: ABC-type transport syste...   252   2e-65 

 gi|48862035|ref|ZP_00315933.1|  COG4591: ABC-type transport syste...   251   2e-65 

 gi|27361562|gb|AAO10470.1|  Conserved hypothetical protein [Vibri...   251   2e-65 

 gi|51245480|ref|YP_065364.1|  similar to lipoprotein releasing sy...   249   1e-64 

 gi|29142135|ref|NP_805477.1|  ABC transporter integral membrane s...   248   2e-64 

 gi|56413795|ref|YP_150870.1|  ABC transporter integral membrane s...   247   5e-64 

 gi|62127372|gb|AAX65075.1|  ABC transporter, integral membrane pr...   247   5e-64 

 gi|40063595|gb|AAR38384.1|  ABC transporter, permease protein [un...   247   6e-64 

 gi|33148228|gb|AAP95748.1|  lipoprotein releasing system transmem...   246   8e-64 

 gi|33148230|gb|AAP95750.1|  lipoprotein releasing system transmem...   242   2e-62 

 gi|56542929|gb|AAV89083.1|  ABC-type transport system [Zymomonas ...   242   2e-62 

 gi|46204233|ref|ZP_00050294.2|  COG4591: ABC-type transport syste...   241   3e-62 

 gi|42521026|ref|NP_966941.1|  hypothetical protein WD1229 [Wolbac...   240   6e-62 

 gi|34557623|ref|NP_907438.1|  hypothetical protein WS1259 [Woline...   240   6e-62 

 gi|46308991|ref|ZP_00211183.1|  COG4591: ABC-type transport syste...   239   1e-61 

 gi|48862033|ref|ZP_00315931.1|  COG4591: ABC-type transport syste...   239   1e-61 

 gi|33519855|ref|NP_878687.1|  ABC transporter integral membrane s...   237   3e-61 

 gi|20091320|ref|NP_617395.1|  hypothetical protein MA2489 [Methan...   237   5e-61 

 gi|48838239|ref|ZP_00295186.1|  COG4591: ABC-type transport syste...   234   3e-60 

 gi|58584740|ref|YP_198313.1|  ABC-type transport system, involved...   233   4e-60 

 gi|21226193|ref|NP_632115.1|  ABC transporter permease protein [M...   232   1e-59 

 gi|57242035|ref|ZP_00369975.1|  conserved hypothetical integral m...   232   1e-59 

 gi|20090527|ref|NP_616602.1|  hypothetical protein MA1674 [Methan...   231   2e-59 

 gi|57237769|ref|YP_179017.1|  permease, putative [Campylobacter j...   231   3e-59 

 gi|20092063|ref|NP_618138.1|  hypothetical protein MA3247 [Methan...   230   5e-59 

 gi|6968378|emb|CAB73198.1|  putative integral membrane protein [C...   229   9e-59 

 gi|48838240|ref|ZP_00295187.1|  COG4591: ABC-type transport syste...   229   9e-59 

 gi|56417192|ref|YP_154266.1|  hypothetical protein AM1183 [Anapla...   227   5e-58 

 gi|57240551|ref|ZP_00368500.1|  conserved hypothetical integral m...   226   1e-57 

 gi|21228952|ref|NP_634874.1|  ABC transporter, permease protein [...   222   1e-56 

 gi|15611791|ref|NP_223442.1|  hypothetical protein jhp0724 [Helic...   220   6e-56 

 gi|42522295|ref|NP_967675.1|  Macrolide specific ABC-type transpo...   218   2e-55 

 gi|23475819|ref|ZP_00131093.1|  COG4591: ABC-type transport syste...   217   5e-55 

 gi|2313911|gb|AAD07831.1|  conserved hypothetical integral membra...   217   6e-55 

 gi|10038970|dbj|BAB13005.1|  hypothetical protein [Buchnera aphid...   216   1e-54 

 gi|24372410|ref|NP_716452.1|  ABC transporter, ATP-binding/permea...   216   1e-54 

 gi|32261866|gb|AAP76915.1|  conserved hypothetical protein [Helic...   216   1e-54 

 gi|59801781|ref|YP_208493.1|  putative ABC transporter, ATP-bindi...   215   2e-54 

 gi|20091321|ref|NP_617396.1|  hypothetical protein MA2490 [Methan...   214   3e-54 

 gi|56385102|gb|AAV85982.1|  MacB [Neisseria gonorrhoeae]               214   4e-54 

 gi|58696954|ref|ZP_00372446.1|  ABC transporter, permease protein...   213   6e-54 

 gi|7379451|emb|CAB84013.1|  putative ABC transporter ATP-binding ...   213   9e-54 

 gi|7225775|gb|AAF40978.1|  ABC transporter, ATP-binding protein [...   212   1e-53 

 gi|28900079|ref|NP_799734.1|  putative ABC transporter, ATP-bindi...   210   4e-53 

 gi|30249852|ref|NP_841922.1|  DUF214 [Nitrosomonas europaea ATCC ...   210   5e-53 

 gi|23468969|ref|ZP_00124304.1|  COG0577: ABC-type antimicrobial p...   210   5e-53 

 gi|26990902|ref|NP_746327.1|  ABC export system, permease/ATP-bin...   210   8e-53 

 gi|15669701|ref|NP_248514.1|  hypothetical protein MJ1507 [Methan...   210   9e-53 

 gi|34762631|ref|ZP_00143624.1|  Lipoprotein releasing system tran...   210   9e-53 

 gi|19703916|ref|NP_603478.1|  Lipoprotein releasing system transm...   209   1e-52 

 gi|46311285|ref|ZP_00211894.1|  COG0577: ABC-type antimicrobial p...   208   2e-52 

 gi|21672562|ref|NP_660629.1|  hypothetical 43.3 kDa protein [Buch...   208   3e-52 

 gi|25166055|dbj|BAC24246.1|  ycfU [Wigglesworthia glossinidia end...   207   4e-52 

 gi|53713160|ref|YP_099152.1|  ABC transporter permease protein [B...   207   6e-52 

 gi|20089338|ref|NP_615413.1|  hypothetical protein MA0447 [Methan...   206   8e-52 

 gi|60280008|gb|AAX16350.1|  PA2390 [Pseudomonas aeruginosa]            204   3e-51 

 gi|48731879|ref|ZP_00265623.1|  COG0577: ABC-type antimicrobial p...   204   4e-51 

 gi|60279990|gb|AAX16333.1|  PA2390 [Pseudomonas aeruginosa]            204   4e-51 

 gi|60279959|gb|AAX16304.1|  PA2390 [Pseudomonas aeruginosa] >gi|3...   204   5e-51 

 gi|9948431|gb|AAG05778.1|  probable ATP-binding/permease fusion A...   204   5e-51 

 gi|12513909|gb|AAG55261.1|  putative ATP-binding component of a t...   203   5e-51 

 gi|46140814|ref|ZP_00203756.1|  COG0577: ABC-type antimicrobial p...   203   6e-51 

 gi|13360424|dbj|BAB34388.1|  putative ATP-binding component of a ...   203   8e-51 

 gi|45358197|ref|NP_987754.1|  hypothetical protein MMP0634 [Metha...   203   9e-51 

 gi|16128847|ref|NP_415400.1|  macrolide transport protein (ABC su...   202   2e-50 

 gi|21227053|ref|NP_632975.1|  ABC transporter, permease protein [...   202   2e-50 

 gi|28869362|ref|NP_791981.1|  macrolide ABC efflux protein [Pseud...   202   2e-50 

 gi|51597040|ref|YP_071231.1|  ABC transporter(efflux), fused perm...   202   2e-50 

 gi|15075093|emb|CAC46650.1|  PROBABLE TRANSMEMBRANE ATP-BINDING A...   202   2e-50 

 gi|30249074|ref|NP_841144.1|  probable ATP-binding/permease fusio...   202   2e-50 

 gi|53712880|ref|YP_098872.1|  ABC transporter permease protein [B...   201   3e-50 

 gi|24112255|ref|NP_706765.1|  putative ATP-binding component of a...   201   3e-50 

 gi|48841130|ref|ZP_00298056.1|  COG0577: ABC-type antimicrobial p...   201   3e-50 

 gi|45442402|ref|NP_993941.1|  putative ABC transporter, ATP-bindi...   201   3e-50 

 gi|48867198|ref|ZP_00320783.1|  COG4591: ABC-type transport syste...   201   4e-50 

 gi|53715757|ref|YP_101749.1|  hypothetical protein BF4478 [Bacter...   201   4e-50 

 gi|16799311|ref|NP_469579.1|  hypothetical protein lin0234 [Liste...   200   5e-50 

 gi|45441056|ref|NP_992595.1|  putative ABC transporter ATP-bindin...   200   5e-50 

 gi|29338522|gb|AAO76322.1|  ABC transporter, permease protein [Ba...   200   5e-50 

 gi|53730882|ref|ZP_00348995.1|  COG0577: ABC-type antimicrobial p...   200   5e-50 

 gi|51595731|ref|YP_069922.1|  putative ABC transporter with fused...   200   6e-50 

 gi|42522999|ref|NP_968379.1|  Lipoprotein releasing system transm...   200   7e-50 

 gi|46143385|ref|ZP_00135343.2|  COG0577: ABC-type antimicrobial p...   199   9e-50 

 gi|60495122|emb|CAH09943.1|  putative lipoprotein releasing syste...   199   9e-50 

 gi|37525538|ref|NP_928882.1|  Macrolide-specific ABC-type efflux ...   199   1e-49 

 gi|16802241|ref|NP_463726.1|  hypothetical protein lmo0195 [Liste...   199   1e-49 

 gi|28899872|ref|NP_799527.1|  hypothetical protein VPA0017 [Vibri...   199   1e-49 

 gi|47096188|ref|ZP_00233787.1|  ABC transporter, permease protein...   198   2e-49 

 gi|28870017|ref|NP_792636.1|  macrolide ABC efflux protein MacB [...   198   3e-49 

 gi|2983943|gb|AAC07492.1|  hypothetical protein [Aquifex aeolicus...   198   3e-49 

 gi|60492532|emb|CAH07303.1|  putative transmembrane permease [Bac...   197   4e-49 

 gi|34557766|ref|NP_907581.1|  PROBABLE TRANSMEMBRANE ATP-BINDING ...   197   4e-49 

 gi|53721660|ref|YP_110645.1|  macrolide-specific ABC-type efflux ...   197   4e-49 

 gi|6458175|gb|AAF10066.1|  conserved hypothetical protein [Deinoc...   196   1e-48 

 gi|29340150|gb|AAO77944.1|  conserved hypothetical protein [Bacte...   196   1e-48 

 gi|20092755|ref|NP_618830.1|  ABC transporter, permease protein [...   196   1e-48 

 gi|48844871|ref|ZP_00299165.1|  COG0577: ABC-type antimicrobial p...   195   2e-48 

 gi|56414005|ref|YP_151080.1|  conserved hypothetical ABC transpor...   195   2e-48 

 gi|29142412|ref|NP_805754.1|  conserved hypothetical ABC transpor...   195   2e-48 

 gi|62127100|gb|AAX64803.1|  putative ABC superfamily (atp&memb) t...   195   2e-48 

 gi|34104014|gb|AAQ60374.1|  probable ABC transporter, ATP-binding...   195   2e-48 

 gi|16419454|gb|AAL19878.1|  putative ABC superfamily (atp&memb) t...   195   2e-48 

 gi|23014032|ref|ZP_00053872.1|  COG4591: ABC-type transport syste...   195   2e-48 

 gi|52144528|ref|YP_082297.1|  ABC transporter, permease [Bacillus...   195   2e-48 

 gi|20806779|ref|NP_621950.1|  ABC-type transport systems, involve...   195   2e-48 

 gi|54307852|ref|YP_128872.1|  hypothetical protein PBPRA0649 [Pho...   195   2e-48 

 gi|47573265|ref|ZP_00243304.1|  COG0577: ABC-type antimicrobial p...   195   2e-48 

 gi|45358434|ref|NP_987991.1|  hypothetical protein MMP0871 [Metha...   195   2e-48 

 gi|48731629|ref|ZP_00265373.1|  COG0577: ABC-type antimicrobial p...   195   3e-48 

 gi|46906427|ref|YP_012816.1|  ABC transporter, permease protein [...   194   3e-48 

 gi|52008079|ref|ZP_00335456.1|  COG0577: ABC-type antimicrobial p...   194   4e-48 

 gi|15156928|gb|AAK87586.1|  AGR_C_3336p [Agrobacterium tumefacien...   193   7e-48 

 gi|50086114|ref|YP_047624.1|  macrolide transport protein (ABC su...   193   1e-47 

 gi|47777853|ref|YP_017432.2|  abc transporter, permease protein, ...   192   1e-47 

 gi|59713919|ref|YP_206694.1|  ABC transporter permease protein [V...   192   1e-47 

 gi|16125183|ref|NP_419747.1|  hypothetical protein CC0931 [Caulob...   192   1e-47 

 gi|50119829|ref|YP_048996.1|  macrolide-specific ABC-type efflux ...   192   2e-47 

 gi|30018973|ref|NP_830604.1|  ABC transporter permease protein [B...   192   2e-47 

 gi|52841086|ref|YP_094885.1|  ABC transporter, permease protein [...   192   2e-47 

 gi|52425184|ref|YP_088321.1|  hypothetical protein MS1129 [Mannhe...   192   2e-47 

 gi|20095091|ref|NP_614938.1|  Permease subunit of a ABC-type tran...   191   2e-47 

 gi|54293825|ref|YP_126240.1|  hypothetical protein lpl0881 [Legio...   191   2e-47 

 gi|46141853|ref|ZP_00147320.2|  COG0577: ABC-type antimicrobial p...   191   3e-47 

 gi|46198957|ref|YP_004624.1|  ABC transporter permease protein [T...   191   3e-47 

 gi|11499065|ref|NP_070299.1|  hypothetical protein AF1470 [Archae...   190   4e-47 

 gi|48838382|ref|ZP_00295326.1|  COG0577: ABC-type antimicrobial p...   190   5e-47 

 gi|11498622|ref|NP_069850.1|  hypothetical protein AF1017 [Archae...   190   5e-47 

 gi|2982995|gb|AAC06608.1|  hypothetical protein [Aquifex aeolicus...   190   7e-47 

 gi|42779964|ref|NP_977211.1|  ABC transporter, permease protein, ...   190   9e-47 

 gi|21227735|ref|NP_633657.1|  ABC transporter, ATP-binding protei...   190   9e-47 

 gi|41689422|ref|ZP_00145956.1|  COG0577: ABC-type antimicrobial p...   189   1e-46 

 gi|23128707|ref|ZP_00110547.1|  COG0577: ABC-type antimicrobial p...   189   1e-46 

 gi|39995783|ref|NP_951734.1|  ABC transporter, permease protein, ...   189   1e-46 

 gi|23114561|ref|ZP_00099857.1|  COG0577: ABC-type antimicrobial p...   189   1e-46 

 gi|17935707|ref|NP_532497.1|  hypothetical protein Atu1817 [Agrob...   189   1e-46 

 gi|37675675|ref|NP_936071.1|  uncharacterized protein conserved i...   188   2e-46 

 gi|41720646|ref|ZP_00149459.1|  COG0577: ABC-type antimicrobial p...   188   2e-46 

 gi|33148377|gb|AAP95897.1|  macrolide-specific ABC-type efflux ca...   188   2e-46 

 gi|47564731|ref|ZP_00235775.1|  ABC transporter, ATP-binding prot...   188   2e-46 

 gi|20807653|ref|NP_622824.1|  ABC-type transport systems, involve...   188   3e-46 

 gi|27359141|gb|AAO08086.1|  ABC-type transport system, involved i...   188   3e-46 

 gi|21673097|ref|NP_661162.1|  hypothetical protein CT0258 [Chloro...   187   4e-46 

 gi|20091991|ref|NP_618066.1|  ABC transporter, permease protein [...   187   4e-46 

 gi|24212973|ref|NP_710454.1|  Lipoprotein releasing system transm...   187   5e-46 

 gi|9658285|gb|AAF96752.1|  conserved hypothetical protein [Vibrio...   187   5e-46 

 gi|45656137|ref|YP_000223.1|  lipoprotein releasing system transm...   187   5e-46 

 gi|52080037|ref|YP_078828.1|  putative ABC transporter permease [...   186   9e-46 

 gi|51892946|ref|YP_075637.1|  ABC transporter permease protein [S...   186   1e-45 

 gi|20090596|ref|NP_616671.1|  hypothetical protein MA1744 [Methan...   186   1e-45 

 gi|21672564|ref|NP_660631.1|  hypothetical 45.3 kDa protein [Buch...   186   1e-45 

 gi|15643119|ref|NP_228162.1|  hypothetical protein TM0351 [Thermo...   186   1e-45 

 gi|56964455|ref|YP_176186.1|  antimicrobial peptide ABC transport...   185   2e-45 

 gi|21685503|emb|CAD30167.1|  putative ABC-transporter permease pr...   185   2e-45 

 gi|47530813|ref|YP_022162.1|  abc transporter, permease protein [...   185   2e-45 

 gi|16264103|ref|NP_436895.1|  hypothetical protein SMb20369 [Sino...   185   2e-45 

 gi|16080093|ref|NP_390919.1|  hypothetical protein BSU30410 [Baci...   184   3e-45 

 gi|48839504|ref|ZP_00296435.1|  COG0577: ABC-type antimicrobial p...   184   4e-45 

 gi|57167894|ref|ZP_00367034.1|  probable integral membrane protei...   184   4e-45 

 gi|32034668|ref|ZP_00134806.1|  COG0577: ABC-type antimicrobial p...   184   5e-45 

 gi|48841243|ref|ZP_00298169.1|  COG0577: ABC-type antimicrobial p...   183   7e-45 

 gi|47091541|ref|ZP_00229338.1|  ABC transporter, permease protein...   183   1e-44 

 gi|32475983|ref|NP_868977.1|  ABC transporter, ATP-binding protei...   183   1e-44 

 gi|56751433|ref|YP_172134.1|  probable ABC transporter permease p...   182   1e-44 

 gi|47565256|ref|ZP_00236298.1|  ABC transporter, ATP-binding prot...   182   1e-44 

 gi|46906636|ref|YP_013025.1|  ABC transporter, permease protein, ...   182   2e-44 

 gi|45358084|ref|NP_987641.1|  ABC transporter, permease protein [...   182   2e-44 

 gi|50812292|ref|NP_391207.2|  hypothetical protein BSU33260 [Baci...   182   2e-44 

 gi|15893536|ref|NP_346885.1|  Integral membrane protein (permease...   182   2e-44 

 gi|57240328|ref|ZP_00368277.1|  ABC transporter, ATP-binding prot...   181   3e-44 

 gi|53688422|ref|ZP_00109956.2|  COG0577: ABC-type antimicrobial p...   181   3e-44 

 gi|45512240|ref|ZP_00163807.1|  COG0577: ABC-type antimicrobial p...   181   3e-44 

 gi|2621781|gb|AAB85200.1|  conserved protein [Methanothermobacter...   181   3e-44 

 gi|25011471|ref|NP_735866.1|  hypothetical protein gbs1429 [Strep...   181   4e-44 

 gi|46141854|ref|ZP_00147321.2|  COG0577: ABC-type antimicrobial p...   181   4e-44 

 gi|33237899|gb|AAP99966.1|  ABC-type antimicrobial peptide transp...   180   5e-44 

 gi|41719598|ref|ZP_00148474.1|  COG0577: ABC-type antimicrobial p...   180   6e-44 

 gi|6968074|emb|CAB75243.1|  ABC-type transmembrane transport prot...   180   7e-44 

 gi|22537506|ref|NP_688357.1|  permease, putative [Streptococcus a...   180   7e-44 

 gi|29338783|gb|AAO76582.1|  ABC transporter, permease protein [Ba...   180   7e-44 

 gi|21229200|ref|NP_635122.1|  ABC transporter, permease protein [...   179   1e-43 

 gi|50589966|ref|ZP_00331419.1|  COG0577: ABC-type antimicrobial p...   179   1e-43 

 gi|48841198|ref|ZP_00298124.1|  COG0577: ABC-type antimicrobial p...   179   2e-43 

 gi|33862950|ref|NP_894510.1|  possible ABC transporter [Prochloro...   178   2e-43 

 gi|57238197|ref|YP_178722.1|  macrolide-specific efflux protein m...   178   2e-43 

 gi|47569751|ref|ZP_00240424.1|  ABC transporter, ATP-binding prot...   178   3e-43 

 gi|32263408|gb|AAP78453.1|  ABC transporter [Helicobacter hepatic...   178   3e-43 

 gi|21227049|ref|NP_632971.1|  hypothetical protein MM0947 [Methan...   178   3e-43 

 gi|15602861|ref|NP_245933.1|  hypothetical protein PM0996 [Pasteu...   177   4e-43 

 gi|21673929|ref|NP_661994.1|  hypothetical protein CT1103 [Chloro...   177   5e-43 

 gi|49480397|ref|YP_039244.1|  ABC transporter, permease [Bacillus...   177   5e-43 

 gi|52140310|ref|YP_086520.1|  ABC transporter, permease [Bacillus...   177   6e-43 

 gi|56476438|ref|YP_158027.1|  transmembrane ATP-binding ABC trans...   176   7e-43 

 gi|21673217|ref|NP_661282.1|  ABC transporter, ATP-binding protei...   176   7e-43 

 gi|46135393|ref|ZP_00162800.2|  COG0577: ABC-type antimicrobial p...   176   7e-43 

 gi|42784417|ref|NP_981664.1|  ABC transporter, permease protein [...   176   1e-42 

 gi|48765803|ref|ZP_00270353.1|  COG4591: ABC-type transport syste...   176   1e-42 

 gi|52843116|ref|YP_096915.1|  ABC transporter, permease [Legionel...   176   1e-42 

 gi|25530473|pir||AC1863  hypothetical protein alr0452 [imported] ...   175   1e-42 

 gi|22957341|ref|ZP_00005047.1|  COG0577: ABC-type antimicrobial p...   175   1e-42 

 gi|24377240|gb|AAN58579.1|  putative ABC transporter, permease co...   175   2e-42 

 gi|21674420|ref|NP_662485.1|  lipoprotein releasing system [Chlor...   175   2e-42 

 gi|41614969|ref|NP_963467.1|  hypothetical protein NEQ175 [Nanoar...   175   2e-42 

 gi|42523263|ref|NP_968643.1|  lipoprotein releasing system transm...   175   2e-42 

 gi|20092759|ref|NP_618834.1|  ABC transporter, permease protein [...   175   2e-42 

 gi|29377448|ref|NP_816602.1|  permease, putative [Enterococcus fa...   175   2e-42 

 gi|33865833|ref|NP_897392.1|  possible ABC transporter [Synechoco...   175   2e-42 

 gi|47564782|ref|ZP_00235826.1|  ABC transporter, ATP-binding prot...   175   3e-42 

 gi|28210234|ref|NP_781178.1|  ABC transporter permease protein [C...   175   3e-42 

 gi|33861470|ref|NP_893031.1|  possible ABC transporter [Prochloro...   175   3e-42 

 gi|57242014|ref|ZP_00369954.1|  ABC transporter, ATP-binding prot...   174   4e-42 

 gi|16332318|ref|NP_443046.1|  hypothetical protein slr0594 [Synec...   174   4e-42 

 gi|21673928|ref|NP_661993.1|  hypothetical protein CT1102 [Chloro...   174   4e-42 

 gi|54302804|ref|YP_132797.1|  hypothetical protein PBPRB1125 [Pho...   174   4e-42 

 gi|52081526|ref|YP_080317.1|  possible acetoin transport system s...   174   4e-42 

 gi|55229890|gb|AAV45309.1|  ABC transporter permease protein [Hal...   174   4e-42 

 gi|16119402|ref|NP_396108.1|  hypothetical protein AGR_pAT_247 [A...   174   4e-42 

 gi|30023285|ref|NP_834916.1|  ABC transporter permease protein [B...   174   4e-42 

 gi|55376281|ref|YP_134134.1|  ABC transporter permease protein [H...   174   4e-42 

 gi|51892115|ref|YP_074806.1|  ABC transporter permease protein [S...   174   5e-42 

 gi|13471429|ref|NP_102995.1|  permease protein of ABC transporter...   174   5e-42 

 gi|28379430|ref|NP_786322.1|  ABC transporter, ATP-binding and pe...   173   6e-42 

 gi|42527544|ref|NP_972642.1|  lipoprotein releasing system, perme...   173   6e-42 

 gi|28898770|ref|NP_798375.1|  hypothetical protein VP1996 [Vibrio...   173   6e-42 

 gi|46135395|ref|ZP_00203487.1|  COG0577: ABC-type antimicrobial p...   173   7e-42 

 gi|25532068|pir||AE1862  hypothetical protein alr0446 [imported] ...   173   1e-41 

 gi|13622010|gb|AAK33768.1|  conserved hypothetical protein [Strep...   172   1e-41 

 gi|54298922|ref|YP_125291.1|  hypothetical protein lpp2989 [Legio...   172   2e-41 

 gi|34396993|gb|AAQ66057.1|  membrane protein, putative [Porphyrom...   172   2e-41 

 gi|48857498|ref|ZP_00311497.1|  COG0577: ABC-type antimicrobial p...   172   2e-41 

 gi|27358966|gb|AAO07914.1|  ABC-type antimicrobial peptide transp...   171   2e-41 

 gi|20091377|ref|NP_617452.1|  ABC transporter, permease protein [...   171   2e-41 

 gi|53730885|ref|ZP_00151782.2|  COG0577: ABC-type antimicrobial p...   171   2e-41 

 gi|20089984|ref|NP_616059.1|  ABC transporter, permease protein [...   171   2e-41 

 gi|46106219|ref|ZP_00186780.2|  COG0577: ABC-type antimicrobial p...   171   3e-41 

 gi|16078501|ref|NP_389320.1|  hypothetical protein BSU14370 [Baci...   171   3e-41 

 gi|41718726|ref|ZP_00147695.1|  COG0577: ABC-type antimicrobial p...   171   3e-41 

 gi|28896201|ref|NP_802551.1|  hypothetical protein SPs1289 [Strep...   171   3e-41 

 gi|19748069|gb|AAL97549.1|  conserved hypothetical protein [Strep...   171   3e-41 

 gi|15896818|ref|NP_350167.1|  Predicted permease [Clostridium ace...   171   3e-41 

 gi|16799496|ref|NP_469764.1|  hypothetical protein lin0419 [Liste...   171   4e-41 

 gi|35211336|dbj|BAC88715.1|  gll0774 [Gloeobacter violaceus PCC 7...   171   4e-41 

 gi|56807831|ref|ZP_00365674.1|  COG0577: ABC-type antimicrobial p...   171   4e-41 

 gi|23024430|ref|ZP_00063642.1|  COG1136: ABC-type antimicrobial p...   171   4e-41 

 gi|23097618|ref|NP_691084.1|  hypothetical protein OB0163 [Oceano...   171   4e-41 

 gi|49236576|ref|ZP_00330634.1|  COG0577: ABC-type antimicrobial p...   171   5e-41 

 gi|29376226|ref|NP_815380.1|  permease protein, putative [Enteroc...   170   5e-41 

 gi|34397272|gb|AAQ66335.1|  membrane protein, putative [Porphyrom...   170   6e-41 

 gi|37677157|ref|NP_937553.1|  ABC-type antimicrobial peptide tran...   170   7e-41 

 gi|54302805|ref|YP_132798.1|  hypothetical protein PBPRB1126 [Pho...   170   9e-41 

 gi|27380415|ref|NP_771944.1|  ABC transporter permease protein [B...   170   9e-41 

 gi|33519853|ref|NP_878685.1|  ABC transporter integral membrane s...   170   9e-41 

 gi|45441503|ref|NP_993042.1|  putative membrane protein [Yersinia...   170   1e-40 

 gi|42527785|ref|NP_972883.1|  permease, putative [Treponema denti...   169   1e-40 

 gi|51596269|ref|YP_070460.1|  putative ABC transporter, permease ...   169   1e-40 

 gi|48766277|ref|ZP_00270827.1|  COG0577: ABC-type antimicrobial p...   169   1e-40 

 gi|48845591|ref|ZP_00299868.1|  COG0577: ABC-type antimicrobial p...   169   2e-40 

 gi|10241793|emb|CAC09551.1|  putative ABC transport system integr...   169   2e-40 

 gi|41725133|ref|ZP_00151891.1|  COG0577: ABC-type antimicrobial p...   168   2e-40 

 gi|56477741|ref|YP_159330.1|  putative ABC transporter protein [A...   168   2e-40 

 gi|15979962|emb|CAC90760.1|  putative membrane protein [Yersinia ...   168   3e-40 

 gi|30248829|ref|NP_840899.1|  DUF214 [Nitrosomonas europaea ATCC ...   168   3e-40 

 gi|15668983|ref|NP_247787.1|  hypothetical protein MJ0797 [Methan...   168   3e-40 

 gi|48855576|ref|ZP_00309735.1|  COG4591: ABC-type transport syste...   168   3e-40 

 gi|25532195|pir||AE1994  hypothetical protein alr1506 [imported] ...   167   4e-40 

 gi|54302049|ref|YP_132042.1|  hypothetical protein PBPRB0369 [Pho...   167   6e-40 

 gi|15672696|ref|NP_266870.1|  ABC transporter ATP-binding and per...   167   6e-40 

 gi|53685188|ref|ZP_00098642.2|  COG0577: ABC-type antimicrobial p...   166   9e-40 

 gi|48870960|ref|ZP_00323677.1|  COG1136: ABC-type antimicrobial p...   166   1e-39 

 gi|42527546|ref|NP_972644.1|  lipoprotein releasing system, perme...   166   1e-39 

 gi|21227711|ref|NP_633633.1|  ABC transporter, permease protein [...   166   1e-39 

 gi|28900414|ref|NP_800069.1|  hypothetical protein VPA0559 [Vibri...   166   1e-39 

 gi|48845105|ref|ZP_00299393.1|  COG0577: ABC-type antimicrobial p...   165   2e-39 

 gi|34332912|gb|AAQ62055.2|  probable ABC transporter,  permease p...   165   2e-39 

 gi|57167636|ref|ZP_00366776.1|  ABC transporter, ATP-binding prot...   165   3e-39 

 gi|35211054|dbj|BAC88434.1|  gll0493 [Gloeobacter violaceus PCC 7...   164   3e-39 

 gi|20089271|ref|NP_615346.1|  hypothetical protein MA0374 [Methan...   164   4e-39 

 gi|21229115|ref|NP_635037.1|  ABC transporter, permease protein [...   164   5e-39 

 gi|7672272|emb|CAB89462.1|  putative ABC transporter integral mem...   163   6e-39 

 gi|45524664|ref|ZP_00175935.1|  COG0577: ABC-type antimicrobial p...   163   8e-39 

 gi|56477740|ref|YP_159329.1|  putative ABC transporter protein [A...   163   8e-39 

 gi|3322873|gb|AAC65554.1|  conserved hypothetical integral membra...   163   8e-39 

 gi|32474570|ref|NP_867564.1|  probable ATP-binding/permease fusio...   163   8e-39 

 gi|29655095|ref|NP_820787.1|  ABC transporter, permease protein [...   163   1e-38 

 gi|35211055|dbj|BAC88435.1|  gll0494 [Gloeobacter violaceus PCC 7...   163   1e-38 

 gi|39996442|ref|NP_952393.1|  ABC transporter, permease protein [...   163   1e-38 

 gi|38233097|ref|NP_938864.1|  Putative ABC transport system integ...   162   1e-38 

 gi|30248830|ref|NP_840900.1|  DUF214 [Nitrosomonas europaea ATCC ...   162   1e-38 

 gi|20091110|ref|NP_617185.1|  ABC transporter, permease protein [...   162   1e-38 

 gi|39934719|ref|NP_946995.1|  predicted ABC-type transport system...   162   2e-38 

 gi|2879915|dbj|BAA24813.1|  bacI [Enterococcus faecalis]               162   2e-38 

 gi|59711713|ref|YP_204489.1|  hypothetical protein VF1106 [Vibrio...   162   2e-38 

 gi|10175743|dbj|BAB06840.1|  BH3121 [Bacillus halodurans C-125] >...   161   2e-38 

 gi|27378818|ref|NP_770347.1|  probable ATP-binding protein [Brady...   161   2e-38 

 gi|15896817|ref|NP_350166.1|  Predicted permease [Clostridium ace...   161   3e-38 

 gi|30250174|ref|NP_842244.1|  DUF214 [Nitrosomonas europaea ATCC ...   161   3e-38 

 gi|22298926|ref|NP_682173.1|  ABC transporter permease protein [T...   160   5e-38 

 gi|19577297|emb|CAD27717.1|  membrane subunit [Enterococcus faeca...   160   5e-38 

 gi|34763698|ref|ZP_00144622.1|  EXPORT ABC TRANSPORTER PERMEASE P...   160   5e-38 

 gi|23475614|ref|ZP_00130898.1|  COG0577: ABC-type antimicrobial p...   160   6e-38 

 gi|50915072|ref|YP_061044.1|  ABC transporter permease protein [S...   159   1e-37 

 gi|28896643|ref|NP_802993.1|  putative ABC transporter (ATP-bindi...   159   1e-37 

 gi|9656075|gb|AAF94721.1|  conserved hypothetical protein [Vibrio...   159   1e-37 

 gi|29607180|dbj|BAC71239.1|  putative ABC transporter integral me...   159   1e-37 

 gi|50841543|ref|YP_054770.1|  ABC transporter associated permease...   159   2e-37 

 gi|19749165|gb|AAL98552.1|  putative ABC transporter (ATP-binding...   159   2e-37 

 gi|21674172|ref|NP_662237.1|  ABC transporter efflux protein [Chl...   158   2e-37 

 gi|30250172|ref|NP_842242.1|  DUF214 [Nitrosomonas europaea ATCC ...   158   2e-37 

 gi|48853908|ref|ZP_00308073.1|  COG4591: ABC-type transport syste...   158   2e-37 

 gi|19704163|ref|NP_603725.1|  ABC transporter permease protein [F...   158   3e-37 

 gi|49476201|ref|YP_034242.1|  ABC transporter, ATP-binding protei...   158   3e-37 

 gi|3322875|gb|AAC65556.1|  conserved hypothetical integral membra...   158   3e-37 

 gi|35210906|dbj|BAC88286.1|  gll0345 [Gloeobacter violaceus PCC 7...   158   3e-37 

 gi|42782273|ref|NP_979520.1|  permease, putative [Bacillus cereus...   158   3e-37 

 gi|49474723|ref|YP_032765.1|  ABC transporter, ATP-binding protei...   158   4e-37 

 gi|29610750|dbj|BAC74795.1|  putative ABC transporter integral me...   158   4e-37 

 gi|54295759|ref|YP_128174.1|  hypothetical protein lpl2849 [Legio...   158   4e-37 

 gi|29339807|gb|AAO77602.1|  ABC transporter, putative permease [B...   157   6e-37 

 gi|48839337|ref|ZP_00296270.1|  COG0577: ABC-type antimicrobial p...   157   7e-37 

 gi|48863400|ref|ZP_00317294.1|  COG0577: ABC-type antimicrobial p...   156   7e-37 

 gi|27382091|ref|NP_773620.1|  probable ABC transporter permease p...   156   8e-37 

 gi|4586220|emb|CAB40972.1|  hypothetical protein [Porphyromonas g...   156   9e-37 

 gi|45658274|ref|YP_002360.1|  lipoprotein releasing system, perme...   156   1e-36 

 gi|48866288|ref|ZP_00320144.1|  COG1136: ABC-type antimicrobial p...   156   1e-36 

 gi|28898771|ref|NP_798376.1|  hypothetical protein VP1997 [Vibrio...   155   2e-36 

 gi|48858320|ref|ZP_00312278.1|  COG0577: ABC-type antimicrobial p...   155   2e-36 

 gi|12514425|gb|AAG55669.1|  orf; Unknown function [Escherichia co...   155   3e-36 

 gi|9950842|gb|AAG07981.1|  probable permease of ABC transporter [...   155   3e-36 

 gi|47095309|ref|ZP_00232920.1|  ABC transporter, ATP-binding/perm...   154   4e-36 

 gi|28867909|ref|NP_790528.1|  permease, putative [Pseudomonas syr...   154   4e-36 

 gi|48837212|ref|ZP_00294207.1|  COG0577: ABC-type antimicrobial p...   154   5e-36 

 gi|46165039|ref|ZP_00138149.2|  COG0577: ABC-type antimicrobial p...   153   6e-36 

 gi|16802786|ref|NP_464271.1|  hypothetical protein lmo0744 [Liste...   153   6e-36 

 gi|23125762|ref|ZP_00107681.1|  COG0577: ABC-type antimicrobial p...   153   7e-36 

 gi|48728920|ref|ZP_00262673.1|  COG0577: ABC-type antimicrobial p...   153   7e-36 

 gi|15789343|ref|NP_279167.1|  hypothetical protein VNG0003C [Halo...   153   8e-36 

 gi|40062675|gb|AAR37588.1|  permease, putative [uncultured bacter...   153   8e-36 

 gi|26987245|ref|NP_742670.1|  ABC efflux transporter, permease pr...   153   1e-35 

 gi|27469323|ref|NP_765960.1|  Enterococcus faecalis plasmid pPD1 ...   153   1e-35 

 gi|23468559|ref|ZP_00123894.1|  COG0577: ABC-type antimicrobial p...   153   1e-35 

 gi|54026627|ref|YP_120869.1|  putative ABC transporter permease [...   153   1e-35 

 gi|29339808|gb|AAO77603.1|  putative ABC transporter, ATP-binding...   152   1e-35 

 gi|53761955|ref|ZP_00167721.2|  COG0577: ABC-type antimicrobial p...   152   2e-35 

 gi|48772589|ref|ZP_00276931.1|  COG0577: ABC-type antimicrobial p...   152   2e-35 

 gi|23111965|ref|ZP_00097518.1|  COG0577: ABC-type antimicrobial p...   152   2e-35 

 gi|55230250|gb|AAV45669.1|  ABC transporter permease protein [Hal...   152   2e-35 

 gi|46906989|ref|YP_013378.1|  ABC transporter, ATP-binding/permea...   152   2e-35 

 gi|32039235|ref|ZP_00137507.1|  COG0577: ABC-type antimicrobial p...   151   2e-35 

 gi|47091701|ref|ZP_00229497.1|  ABC transporter, ATP-binding/perm...   151   2e-35 

 gi|50120449|ref|YP_049616.1|  putative permease [Erwinia carotovo...   151   3e-35 

 gi|15893612|ref|NP_346961.1|  Predicted permease [Clostridium ace...   151   3e-35 

 gi|53711851|ref|YP_097843.1|  ABC transporter putative permease [...   151   3e-35 

 gi|53689376|ref|ZP_00063554.2|  COG0577: ABC-type antimicrobial p...   151   4e-35 

 gi|49478827|ref|YP_038974.1|  conserved hypothetical protein, pos...   151   5e-35 

 gi|34397621|gb|AAQ66683.1|  ABC transporter, permease protein, pu...   150   6e-35 

 gi|40062676|gb|AAR37589.1|  permease, putative [uncultured bacter...   150   6e-35 

 gi|29607203|dbj|BAC71262.1|  putative ABC transporter integral me...   150   6e-35 

 gi|15897947|ref|NP_342552.1|  hypothetical protein SSO1080 [Sulfo...   150   6e-35 

 gi|38234455|ref|NP_940222.1|  Putative ABC transport system perme...   150   1e-34 

 gi|21674173|ref|NP_662238.1|  ABC transporter efflux protein [Chl...   150   1e-34 

 gi|18314244|ref|NP_560911.1|  hypothetical protein PAE3684 [Pyrob...   149   1e-34 

 gi|32812399|emb|CAD97587.1|  putative ABC transporter permease [C...   149   1e-34 

 gi|15893745|ref|NP_347094.1|  Predicted ATP transporter permease ...   149   2e-34 

 gi|53711850|ref|YP_097842.1|  putative ABC transporter ATP-bindin...   149   2e-34 

 gi|15900680|ref|NP_345284.1|  hypothetical protein SP0787 [Strept...   149   2e-34 

 gi|56808486|ref|ZP_00366227.1|  COG0577: ABC-type antimicrobial p...   149   2e-34 

 gi|15902739|ref|NP_358289.1|  hypothetical protein spr0695 [Strep...   148   2e-34 

 gi|37526538|ref|NP_929882.1|  hypothetical protein plu2647 [Photo...   148   3e-34 

 gi|60491512|emb|CAH06264.1|  putative ATP-binding component of AB...   148   4e-34 

 gi|21325766|dbj|BAC00387.1|  ABC-type transporter, permease compo...   148   4e-34 

 gi|42527356|ref|NP_972454.1|  ABC transporter, permease protein, ...   147   5e-34 

 gi|32474517|ref|NP_867511.1|  probable lipoprotein releasing syst...   147   5e-34 

 gi|18314231|ref|NP_560898.1|  hypothetical protein PAE3663 [Pyrob...   146   8e-34 

 gi|10176298|dbj|BAB07393.1|  ABC transporter (ATP-binding protein...   146   8e-34 

 gi|28900413|ref|NP_800068.1|  hypothetical protein VPA0558 [Vibri...   146   1e-33 

 gi|48765856|ref|ZP_00270406.1|  COG0577: ABC-type antimicrobial p...   146   1e-33 

 gi|53731618|ref|ZP_00349217.1|  COG0577: ABC-type antimicrobial p...   146   1e-33 

 gi|32473028|ref|NP_866022.1|  hypothetical protein RB4305 [Rhodop...   146   1e-33 

 gi|21323171|dbj|BAB97799.1|  ABC-type transport systems, involved...   146   1e-33 

 gi|32474306|ref|NP_867300.1|  conserved hypothetical protein-puta...   145   2e-33 

 gi|54302050|ref|YP_132043.1|  hypothetical protein PBPRB0370 [Pho...   145   2e-33 

 gi|29375889|ref|NP_815043.1|  permease domain protein [Enterococc...   144   3e-33 

 gi|59711771|ref|YP_204547.1|  export ABC transporter permease pro...   144   3e-33 

 gi|18643163|gb|AAL76237.1|  DppA [Pseudoalteromonas tunicata]          144   6e-33 

 gi|15608127|ref|NP_215502.1|  PROBABLE ADHESION COMPONENT TRANSPO...   143   6e-33 

 gi|23465504|ref|NP_696107.1|  possible transport protein [Bifidob...   143   7e-33 

 gi|31792177|ref|NP_854670.1|  PROBABLE ADHESION COMPONENT TRANSPO...   143   7e-33 

 gi|9656074|gb|AAF94720.1|  conserved hypothetical protein [Vibrio...   143   7e-33 

 gi|13880581|gb|AAK45263.1|  conserved hypothetical protein [Mycob...   143   8e-33 

 gi|15894110|ref|NP_347459.1|  Predicted membrane protein [Clostri...   143   1e-32 

 gi|18145202|dbj|BAB81246.1|  probable ABC transporter [Clostridiu...   143   1e-32 

 gi|16800256|ref|NP_470524.1|  hypothetical protein lin1187 [Liste...   142   1e-32 

 gi|53686129|ref|ZP_00344873.1|  COG0577: ABC-type antimicrobial p...   142   2e-32 

 gi|46190454|ref|ZP_00121484.2|  COG0577: ABC-type antimicrobial p...   142   2e-32 

 gi|28868843|ref|NP_791462.1|  ABC transporter, permease protein, ...   142   2e-32 

 gi|19551651|ref|NP_599653.1|  ABC-type transport system permease ...   142   2e-32 

 gi|28211095|ref|NP_782039.1|  putative permease [Clostridium teta...   141   2e-32 

 gi|21228993|ref|NP_634915.1|  ABC transporter, permease protein [...   141   3e-32 

 gi|23113782|ref|ZP_00099129.1|  COG0577: ABC-type antimicrobial p...   141   3e-32 

 gi|46313606|ref|ZP_00214195.1|  COG4591: ABC-type transport syste...   141   3e-32 

 gi|48863399|ref|ZP_00317293.1|  COG0577: ABC-type antimicrobial p...   141   3e-32 

 gi|7430330|pir||G70047  conserved hypothetical protein yvrM - Bac...   141   5e-32 

 gi|23471760|ref|ZP_00127089.1|  COG0577: ABC-type antimicrobial p...   141   5e-32 

 gi|53798558|ref|ZP_00358981.1|  COG0577: ABC-type antimicrobial p...   141   5e-32 

 gi|15602314|ref|NP_245386.1|  hypothetical protein PM0449 [Pasteu...   140   6e-32 

 gi|15921140|ref|NP_376809.1|  hypothetical protein ST0904 [Sulfol...   140   7e-32 

 gi|23103026|ref|ZP_00089519.1|  COG4591: ABC-type transport syste...   140   8e-32 

 gi|41326732|emb|CAF21214.1|  ABC-type transport system, involved ...   140   8e-32 

 gi|15673086|ref|NP_267260.1|  ABC transporter permease protein [L...   140   8e-32 

 gi|46581723|ref|YP_012531.1|  ABC transporter, permease protein [...   139   9e-32 

 gi|21325324|dbj|BAB99945.1|  ABC-type transporter, permease compo...   139   9e-32 

 gi|59711770|ref|YP_204546.1|  export ABC transporter permease pro...   139   9e-32 

 gi|47092023|ref|ZP_00229817.1|  ABC transporter, permease protein...   139   1e-31 

 gi|50843475|ref|YP_056702.1|  ABC transporter associated permease...   139   1e-31 

 gi|46907443|ref|YP_013832.1|  ABC transporter, permease protein [...   139   1e-31 

 gi|46310933|ref|ZP_00211548.1|  COG0577: ABC-type antimicrobial p...   139   1e-31 

 gi|50120448|ref|YP_049615.1|  putative permease [Erwinia carotovo...   139   1e-31 

 gi|42524549|ref|NP_969929.1|  ABC-type lipoprotein transporter, p...   139   2e-31 

 gi|20092387|ref|NP_618462.1|  ABC transporter, permease protein [...   139   2e-31 

 gi|56461365|ref|YP_156646.1|  ABC-type transport system, permease...   139   2e-31 

 gi|17982260|gb|AAL51542.1|  ABC TRANSPORTER ATP-BINDING PROTEIN /...   138   2e-31 

 gi|49243518|emb|CAG41942.1|  putative permease protein [Staphyloc...   138   2e-31 

 gi|8894820|emb|CAB96016.1|  putative ABC transport system integra...   138   2e-31 

 gi|3323283|gb|AAC65917.1|  conserved hypothetical integral membra...   138   3e-31 

 gi|52549161|gb|AAU83010.1|  ABC transporter permease protein [unc...   138   3e-31 

 gi|16803264|ref|NP_464749.1|  hypothetical protein lmo1224 [Liste...   138   3e-31 

 gi|15895273|ref|NP_348622.1|  Predicted permease [Clostridium ace...   138   3e-31 

 gi|9950262|gb|AAG07452.1|  hypothetical protein PA4065 [Pseudomon...   138   3e-31 

 gi|56962482|ref|YP_174208.1|  antimicrobial peptide ABC transport...   138   4e-31 

 gi|37677158|ref|NP_937554.1|  ABC-type antimicrobial peptide tran...   138   4e-31 

 gi|25028992|ref|NP_739046.1|  putative ABC transporter permease p...   137   5e-31 

 gi|6458160|gb|AAF10053.1|  conserved hypothetical protein [Deinoc...   137   5e-31 

 gi|27358967|gb|AAO07915.1|  ABC-type antimicrobial peptide transp...   137   6e-31 

 gi|53685362|ref|ZP_00098650.2|  COG0577: ABC-type antimicrobial p...   137   6e-31 

 gi|23475613|ref|ZP_00130897.1|  COG0577: ABC-type antimicrobial p...   137   7e-31 

 gi|59710933|ref|YP_203709.1|  permease [Vibrio fischeri ES114] >g...   136   1e-30 

 gi|59711712|ref|YP_204488.1|  transporter [Vibrio fischeri ES114]...   136   1e-30 

 gi|28379048|ref|NP_785940.1|  ABC transporter, ATP-binding and pe...   136   1e-30 

 gi|46310932|ref|ZP_00211547.1|  COG0577: ABC-type antimicrobial p...   136   1e-30 

 gi|20091663|ref|NP_617738.1|  ABC transporter, permease protein [...   136   1e-30 

 gi|42522660|ref|NP_968040.1|  ABC-type antimicrobial peptide tran...   135   2e-30 

 gi|23111964|ref|ZP_00097517.1|  COG0577: ABC-type antimicrobial p...   134   3e-30 

 gi|57240580|ref|ZP_00368529.1|  probable integral membrane protei...   134   3e-30 

 gi|28378125|ref|NP_785017.1|  ABC transporter, ATP-binding and pe...   134   4e-30 

 gi|21228766|ref|NP_634688.1|  hypothetical protein MM2664 [Methan...   134   4e-30 

 gi|39996265|ref|NP_952216.1|  ABC transporter, permease protein [...   134   4e-30 

 gi|46314341|ref|ZP_00214927.1|  COG4591: ABC-type transport syste...   134   5e-30 

 gi|46318353|ref|ZP_00218816.1|  COG0577: ABC-type antimicrobial p...   134   5e-30 

 gi|45521697|ref|ZP_00173215.1|  COG0577: ABC-type antimicrobial p...   134   6e-30 

 gi|32476753|ref|NP_869747.1|  probable ABC transport system integ...   134   6e-30 

 gi|18144407|dbj|BAB80453.1|  hypothetical protein [Clostridium pe...   134   6e-30 

 gi|19704688|ref|NP_604250.1|  ABC transporter permease protein [F...   133   7e-30 

 gi|21203338|dbj|BAB94039.1|  MW0174 [Staphylococcus aureus subsp....   133   7e-30 

 gi|57238673|ref|YP_179804.1|  ABC transporter, permease protein [...   133   7e-30 

 gi|46190826|ref|ZP_00206578.1|  COG0577: ABC-type antimicrobial p...   133   7e-30 

 gi|37526626|ref|NP_929970.1|  hypothetical protein plu2736 [Photo...   133   8e-30 

 gi|51596268|ref|YP_070459.1|  putative ABC transporter, permease ...   133   8e-30 

 gi|15896796|ref|NP_350145.1|  ABC-type transporter, permease comp...   133   1e-29 

 gi|53723341|ref|YP_112326.1|  putative permease [Burkholderia pse...   133   1e-29 

 gi|39996266|ref|NP_952217.1|  ABC transporter, permease protein [...   132   1e-29 

 gi|53715894|ref|YP_106592.1|  ABC transporter, permease protein, ...   132   2e-29 

 gi|46580842|ref|YP_011650.1|  ABC transporter, permease protein [...   132   2e-29 

 gi|6969078|emb|CAB73649.1|  putative integral membrane protein [C...   132   2e-29 

 gi|50196947|ref|YP_052637.1|  abc transporter, permease protein [...   132   2e-29 

 gi|48845918|ref|ZP_00300188.1|  COG0577: ABC-type antimicrobial p...   132   2e-29 

 gi|23465701|ref|NP_696304.1|  protein with weak similarity to com...   131   3e-29 

 gi|25045975|gb|AAN71839.1|  SA0193/BacI-like protein [Staphylococ...   131   3e-29 

 gi|15602315|ref|NP_245387.1|  hypothetical protein PM0450 [Pasteu...   131   3e-29 

 gi|49478196|ref|YP_037464.1|  ABC transporter, permease [Bacillus...   131   3e-29 

 gi|54026221|ref|YP_120463.1|  putative transporter permease [Noca...   131   3e-29 

 gi|22537163|ref|NP_688014.1|  permease, putative [Streptococcus a...   131   4e-29 

 gi|48866054|ref|ZP_00319911.1|  COG0577: ABC-type antimicrobial p...   131   5e-29 

 gi|53731492|ref|ZP_00349179.1|  COG0577: ABC-type antimicrobial p...   130   5e-29 

 gi|50591446|ref|ZP_00332757.1|  COG0577: ABC-type antimicrobial p...   130   5e-29 

 gi|48731714|ref|ZP_00265458.1|  COG0577: ABC-type antimicrobial p...   130   6e-29 

 gi|34397622|gb|AAQ66684.1|  ABC transporter, permease protein, pu...   130   7e-29 

 gi|52142191|ref|YP_084638.1|  ABC transporter, permease [Bacillus...   130   8e-29 

 gi|25011092|ref|NP_735487.1|  hypothetical protein gbs1038 [Strep...   130   8e-29 

 gi|15893817|ref|NP_347166.1|  Predicted permease, domain duplicat...   129   1e-28 

 gi|48839088|ref|ZP_00296023.1|  COG0577: ABC-type antimicrobial p...   129   1e-28 

 gi|30263312|ref|NP_845689.1|  ABC transporter, permease protein [...   129   1e-28 

 gi|34762928|ref|ZP_00143908.1|  ABC transporter permease protein ...   129   1e-28 

 gi|15903539|ref|NP_359089.1|  hypothetical protein spr1496 [Strep...   129   2e-28 

 gi|15901487|ref|NP_346091.1|  hypothetical protein SP1652 [Strept...   129   2e-28 

 gi|35211765|dbj|BAC89142.1|  gll1201 [Gloeobacter violaceus PCC 7...   129   2e-28 

 gi|47575347|ref|ZP_00245382.1|  COG0577: ABC-type antimicrobial p...   128   2e-28 

 gi|54307586|ref|YP_128606.1|  putative ABC-type antimicrobial pep...   128   2e-28 

 gi|58338158|ref|YP_194743.1|  ABC transporter permease protein [L...   128   2e-28 

 gi|57168779|ref|ZP_00367910.1|  ABC transporter, ATP-binding prot...   128   3e-28 

 gi|24377785|gb|AAN59077.1|  putative ABC transporter, membrane pr...   128   3e-28 

 gi|18313238|ref|NP_559905.1|  hypothetical protein PAE2288 [Pyrob...   128   4e-28 

 gi|15898611|ref|NP_343216.1|  hypothetical protein SSO1810 [Sulfo...   128   4e-28 

 gi|58338181|ref|YP_194766.1|  ABC transporter ATP binding protein...   128   4e-28 

 gi|48772588|ref|ZP_00276930.1|  COG0577: ABC-type antimicrobial p...   127   5e-28 

 gi|23335685|ref|ZP_00120919.1|  COG0577: ABC-type antimicrobial p...   126   8e-28 

 gi|28897074|ref|NP_796679.1|  hypothetical protein VP0300 [Vibrio...   126   1e-27 

 gi|55981802|ref|YP_145099.1|  ABC transporter, permease protein [...   126   1e-27 

 gi|53684160|ref|ZP_00103626.2|  COG0577: ABC-type antimicrobial p...   126   1e-27 

 gi|24377544|gb|AAN58857.1|  putative ABC transporter, permease pr...   126   1e-27 

 gi|6015790|emb|CAB57617.1|  hypothetical protein [Sulfolobus solf...   126   1e-27 

 gi|48870823|ref|ZP_00323541.1|  COG1136: ABC-type antimicrobial p...   126   1e-27 

 gi|48862085|ref|ZP_00315983.1|  COG0577: ABC-type antimicrobial p...   126   1e-27 

 gi|24377723|gb|AAN59020.1|  conserved hypothetical protein; possi...   126   1e-27 

 gi|4098079|gb|AAD09219.1|  ABC transporter membrane protein subun...   126   1e-27 

 gi|46199784|ref|YP_005451.1|  ABC transporter permease protein [T...   126   1e-27 

 gi|11499408|ref|NP_070647.1|  hypothetical protein AF1820 [Archae...   126   1e-27 

 gi|23465048|ref|NP_695651.1|  possible permease protein of ABC tr...   126   1e-27 

 gi|24377739|gb|AAN59035.1|  hypothetical protein; possible permea...   126   2e-27 

 gi|32473364|ref|NP_866358.1|  hypothetical protein RB4864 [Rhodop...   125   2e-27 

 gi|24378290|gb|AAN59539.1|  putative ABC transporter, permease pr...   125   2e-27 

 gi|51891745|ref|YP_074436.1|  putative ABC transporter permease p...   125   2e-27 

 gi|28379326|ref|NP_786218.1|  ABC transporter, permease protein (...   124   3e-27 

 gi|15625441|gb|AAL04089.1|  PsaB [Streptococcus mutans]                124   3e-27 

 gi|48862086|ref|ZP_00315984.1|  COG0577: ABC-type antimicrobial p...   124   3e-27 

 gi|32487246|emb|CAD91213.1|  putative ABC transporter, Dbv18 [Non...   124   4e-27 

 gi|48871167|ref|ZP_00323883.1|  COG0577: ABC-type antimicrobial p...   124   4e-27 

 gi|9657139|gb|AAF95695.1|  conserved hypothetical protein [Vibrio...   124   5e-27 

 gi|27360292|gb|AAO09229.1|  ABC-type antimicrobial peptide transp...   124   5e-27 

 gi|19704689|ref|NP_604251.1|  ABC transporter permease protein [F...   124   5e-27 

 gi|21401279|ref|NP_657264.1|  DUF214, Predicted permease [Bacillu...   124   5e-27 

 gi|48826283|ref|ZP_00287505.1|  COG1136: ABC-type antimicrobial p...   124   5e-27 

 gi|16119681|ref|NP_396387.1|  hypothetical protein AGR_pAT_665 [A...   124   5e-27 

 gi|46446450|ref|YP_007815.1|  hypothetical protein pc0816 [Parach...   124   6e-27 

 gi|54293171|ref|YP_125586.1|  hypothetical protein lpl0217 [Legio...   123   7e-27 

 gi|34762927|ref|ZP_00143907.1|  ABC transporter permease protein ...   123   7e-27 

 gi|37678602|ref|NP_933211.1|  ABC-type antimicrobial peptide tran...   123   7e-27 

 gi|50914301|ref|YP_060273.1|  ABC transporter permease protein [S...   123   7e-27 

 gi|21233336|ref|NP_639253.1|  hypothetical protein XCC3913 [Xanth...   123   8e-27 

 gi|42527022|ref|NP_972120.1|  permease domain protein [Treponema ...   123   8e-27 

 gi|56808389|ref|ZP_00366142.1|  COG0577: ABC-type antimicrobial p...   123   8e-27 

 gi|695784|emb|CAA58843.1|  orf3 [Zymomonas mobilis]                    123   8e-27 

 gi|23002215|ref|ZP_00045893.1|  COG0577: ABC-type antimicrobial p...   123   9e-27 

 gi|18311669|ref|NP_558336.1|  hypothetical protein PAE0039 [Pyrob...   123   9e-27 

 gi|48863095|ref|ZP_00316989.1|  COG0577: ABC-type antimicrobial p...   123   9e-27 

 gi|53685622|ref|ZP_00099199.2|  COG0577: ABC-type antimicrobial p...   123   1e-26 

 gi|48845919|ref|ZP_00300189.1|  COG0577: ABC-type antimicrobial p...   123   1e-26 

 gi|28211463|ref|NP_782407.1|  ABC transporter ATP-binding protein...   123   1e-26 

 gi|13622383|gb|AAK34110.1|  hypothetical protein SPy1255 [Strepto...   123   1e-26 

 gi|47564488|ref|ZP_00235533.1|  COG0577:ABC-type transport system...   123   1e-26 

 gi|32473034|ref|NP_866028.1|  hypothetical protein-transmembrane ...   123   1e-26 

 gi|21110406|gb|AAM38833.1|  conserved hypothetical protein [Xanth...   122   1e-26 

 gi|50955706|ref|YP_062994.1|  hypothetical protein Lxx22040 [Leif...   122   2e-26 

 gi|48859666|ref|ZP_00313597.1|  COG0577: ABC-type antimicrobial p...   122   2e-26 

 gi|17939036|ref|NP_535824.1|  ABC transporter, membrane spanning ...   122   2e-26 

 gi|23104475|ref|ZP_00090939.1|  COG0577: ABC-type antimicrobial p...   122   2e-26 

 gi|39997285|ref|NP_953236.1|  ABC transporter, permease protein [...   122   2e-26 

 gi|48826262|ref|ZP_00287484.1|  COG0577: ABC-type antimicrobial p...   122   2e-26 

 gi|46200077|ref|YP_005744.1|  ABC transporter permease protein [T...   122   2e-26 

 gi|9656140|gb|AAF94780.1|  conserved hypothetical protein [Vibrio...   121   3e-26 

 gi|23097815|ref|NP_691281.1|  hypothetical protein OB0360 [Oceano...   121   3e-26 

 gi|39933274|ref|NP_945550.1|  possible ABC transporter permeases ...   121   3e-26 

 gi|53685146|ref|ZP_00097994.2|  COG1136: ABC-type antimicrobial p...   121   3e-26 

 gi|34557888|ref|NP_907703.1|  INTEGRAL MEMBRANE PROTEIN-Permease ...   121   4e-26 

 gi|57168778|ref|ZP_00367909.1|  permease protein, putative [Campy...   121   4e-26 

 gi|28898000|ref|NP_797605.1|  hypothetical protein VP1226 [Vibrio...   121   4e-26 

 gi|25026982|ref|NP_737036.1|  hypothetical protein CE0426 [Coryne...   121   4e-26 

 gi|23003154|ref|ZP_00046822.1|  COG1136: ABC-type antimicrobial p...   121   5e-26 

 gi|29606972|dbj|BAC71032.1|  putative integral membrane protein [...   121   5e-26 

 gi|60493370|emb|CAH08156.1|  putative membrane protein [Bacteroid...   120   7e-26 

 gi|13272379|gb|AAK17129.1|  putative membrane transporter protein...   120   7e-26 

 gi|53713663|ref|YP_099655.1|  putative ABC transporter permease p...   120   7e-26 

 gi|48854484|ref|ZP_00308646.1|  COG0577: ABC-type antimicrobial p...   119   1e-25 

 gi|23335686|ref|ZP_00120920.1|  COG0577: ABC-type antimicrobial p...   119   1e-25 

 gi|29375908|ref|NP_815062.1|  ABC transporter, ATP-binding/permea...   119   1e-25 

 gi|24216411|ref|NP_713892.1|  hypothetical protein LA3712 [Leptos...   119   1e-25 

 gi|54028253|ref|ZP_00360406.1|  COG0577: ABC-type antimicrobial p...   119   1e-25 

 gi|42527023|ref|NP_972121.1|  permease domain protein [Treponema ...   119   1e-25 

 gi|34105249|gb|AAQ61604.1|  conserved hypothetical protein [Chrom...   119   1e-25 

 gi|6969077|emb|CAB73648.1|  possible ABC transport system permeas...   119   2e-25 

 gi|57238672|ref|YP_179803.1|  ABC transporter, permease protein [...   119   2e-25 

 gi|34557889|ref|NP_907704.1|  ABC TRANSPORT PERMEASE PROTEIN-Invo...   119   2e-25 

 gi|45656417|ref|YP_000503.1|  hypothetical protein LIC10519 [Lept...   118   2e-25 

 gi|15603689|ref|NP_246763.1|  hypothetical protein PM1824 [Pasteu...   118   2e-25 

 gi|56479326|ref|YP_160915.1|  hypothetical protein ebA6805 [Azoar...   118   2e-25 

 gi|19748365|gb|AAL97819.1|  hypothetical protein [Streptococcus p...   118   3e-25 

 gi|16263060|ref|NP_435853.1|  hypothetical protein SMa1122 [Sinor...   118   3e-25 

 gi|22535380|gb|AAM97298.1|  FeeE [uncultured bacterium]                118   3e-25 

 gi|28211548|ref|NP_782492.1|  ABC transporter ATP-binding protein...   118   5e-25 

 gi|35212044|dbj|BAC89420.1|  glr1479 [Gloeobacter violaceus PCC 7...   117   5e-25 

 gi|54308747|ref|YP_129767.1|  hypothetical protein PBPRA1554 [Pho...   117   5e-25 

 gi|11496870|ref|NP_045651.1|  hypothetical protein BBJ27 [Borreli...   117   6e-25 

 gi|7190473|gb|AAF39285.1|  conserved hypothetical protein [Chlamy...   117   8e-25 

 gi|32476756|ref|NP_869750.1|  putative ABC transporter integral m...   116   9e-25 

 gi|35211992|dbj|BAC89368.1|  gll1427 [Gloeobacter violaceus PCC 7...   116   1e-24 

 gi|34396435|gb|AAQ65501.1|  ABC transporter, permease protein, pu...   116   1e-24 

 gi|28896003|ref|NP_802353.1|  hypothetical protein SPs1091 [Strep...   116   1e-24 

 gi|45915922|ref|ZP_00194729.2|  COG0577: ABC-type antimicrobial p...   116   1e-24 

 gi|15604870|ref|NP_219654.1|  hypothetical protein CT151 [Chlamyd...   116   1e-24 

 gi|10957500|ref|NP_051589.1|  hypothetical protein DRB0050 [Deino...   115   2e-24 

 gi|35212995|dbj|BAC90368.1|  gll2427 [Gloeobacter violaceus PCC 7...   115   2e-24 

 gi|46135604|ref|ZP_00163121.2|  COG0577: ABC-type antimicrobial p...   115   2e-24 

 gi|62148209|emb|CAH63966.1|  lipoprotein releasing system transme...   115   2e-24 

 gi|29840287|ref|NP_829393.1|  permease, putative [Chlamydophila c...   115   3e-24 

 gi|37679616|ref|NP_934225.1|  ABC-type antimicrobial peptide tran...   115   3e-24 

 gi|15903868|ref|NP_359418.1|  hypothetical protein spr1826 [Strep...   114   3e-24 

 gi|23346861|gb|AAN29043.1|  ABC transporter, permease protein [Br...   114   3e-24 

 gi|46131701|ref|ZP_00170069.2|  COG0577: ABC-type antimicrobial p...   114   4e-24 

 gi|23113205|ref|ZP_00098602.1|  COG0577: ABC-type antimicrobial p...   114   4e-24 

 gi|53722953|ref|YP_111938.1|  putative ABC transport system, memb...   114   6e-24 

 gi|53716757|ref|YP_104983.1|  ABC transporter, permease protein [...   113   7e-24 

 gi|35211835|dbj|BAC89212.1|  glr1271 [Gloeobacter violaceus PCC 7...   113   1e-23 

 gi|52078904|ref|YP_077695.1|  hypothetical membrane protein [Baci...   113   1e-23 

 gi|15901836|ref|NP_346440.1|  hypothetical protein SP2013 [Strept...   113   1e-23 

 gi|52007911|ref|ZP_00335288.1|  COG0577: ABC-type antimicrobial p...   113   1e-23 

 gi|23471071|ref|ZP_00126402.1|  COG0577: ABC-type antimicrobial p...   113   1e-23 

 gi|51245635|ref|YP_065519.1|  similar to lipoprotein releasing sy...   113   1e-23 

 gi|27362318|gb|AAO11173.1|  ABC-type antimicrobial peptide transp...   113   1e-23 

 gi|24372445|ref|NP_716487.1|  hypothetical protein SO0856 [Shewan...   113   1e-23 

 gi|16119360|ref|NP_396066.1|  hypothetical protein AGR_pAT_194 [A...   112   2e-23 

 gi|29338166|gb|AAO75968.1|  putative ABC transporter permease [Ba...   112   2e-23 

 gi|54029448|ref|ZP_00361589.1|  COG0577: ABC-type antimicrobial p...   112   2e-23 

 gi|15895988|ref|NP_349337.1|  Predicted permease [Clostridium ace...   112   2e-23 

 gi|47575565|ref|ZP_00245600.1|  COG0577: ABC-type antimicrobial p...   112   2e-23 

 gi|3323284|gb|AAC65918.1|  conserved hypothetical integral membra...   112   2e-23 

 gi|21673386|ref|NP_661451.1|  ABC-type export system, membrane pr...   111   3e-23 

 gi|29338167|gb|AAO75969.1|  putative ABC-transporter permease pro...   111   3e-23 

 gi|46562224|ref|YP_009063.1|  ABC transporter, permease protein, ...   111   4e-23 

 gi|58579781|ref|YP_198797.1|  hypothetical protein XOO0158 [Xanth...   111   4e-23 

 gi|60493369|emb|CAH08155.1|  putative ABC transport system, membr...   111   4e-23 

 gi|46318352|ref|ZP_00218815.1|  COG0577: ABC-type antimicrobial p...   111   5e-23 

 gi|24985411|gb|AAN69330.1|  ABC transporter, permease protein, pu...   110   6e-23 

 gi|34396793|gb|AAQ65858.1|  ABC transporter, permease protein, pu...   110   7e-23 

 gi|53761956|ref|ZP_00167722.2|  COG0577: ABC-type antimicrobial p...   110   9e-23 

 gi|23129027|ref|ZP_00110861.1|  COG0577: ABC-type antimicrobial p...   109   1e-22 

 gi|27375572|ref|NP_767101.1|  probable ABC transporter permease p...   109   1e-22 

 gi|45527667|ref|ZP_00178867.1|  COG0577: ABC-type antimicrobial p...   109   1e-22 

 gi|53713661|ref|YP_099653.1|  putative ABC transporter permease [...   109   1e-22 

 gi|29609574|dbj|BAC73624.1|  putative integral membrane protein [...   109   1e-22 

 gi|21110407|gb|AAM38834.1|  conserved hypothetical protein [Xanth...   109   1e-22 

 gi|20520735|emb|CAD30925.1|  putative integral membrane protein [...   109   1e-22 

 gi|48826511|ref|ZP_00287715.1|  COG0577: ABC-type antimicrobial p...   109   2e-22 

 gi|53798147|ref|ZP_00358744.1|  COG0577: ABC-type antimicrobial p...   109   2e-22 

 gi|46132323|ref|ZP_00202874.1|  COG0577: ABC-type antimicrobial p...   109   2e-22 

 gi|21233337|ref|NP_639254.1|  hypothetical protein XCC3914 [Xanth...   109   2e-22 

 gi|53612145|ref|ZP_00342482.1|  COG0577: ABC-type antimicrobial p...   109   2e-22 

 gi|33236099|gb|AAP98189.1|  hypothetical protein CpB0256 [Chlamyd...   109   2e-22 

 gi|42527357|ref|NP_972455.1|  ABC transporter, permease protein, ...   109   2e-22 

 gi|53757872|gb|AAU92163.1|  ABC-transporter permease protein, put...   109   2e-22 

 gi|60493368|emb|CAH08154.1|  putative ABc transport system, membr...   108   2e-22 

 gi|15895523|ref|NP_348872.1|  Predicted permease [Clostridium ace...   108   2e-22 

 gi|23464771|ref|NP_695374.1|  large transmembrane protein possibl...   108   3e-22 

 gi|15902568|ref|NP_358118.1|  ABC transporter membrane-spanning p...   108   3e-22 

 gi|48780682|ref|ZP_00277376.1|  COG0577: ABC-type antimicrobial p...   108   4e-22 

 gi|46140589|ref|ZP_00152171.2|  COG4591: ABC-type transport syste...   108   4e-22 

 gi|51891993|ref|YP_074684.1|  ABC transporter permease protein [S...   108   4e-22 

 gi|53686272|ref|ZP_00344926.1|  COG0577: ABC-type antimicrobial p...   108   4e-22 

 gi|49482540|ref|YP_039764.1|  putative membrane protein [Staphylo...   108   4e-22 

 gi|15835784|ref|NP_300308.1|  CT151 hypothetical protein [Chlamyd...   108   4e-22 

 gi|25166057|dbj|BAC24248.1|  ycfW [Wigglesworthia glossinidia end...   108   4e-22 

 gi|15900507|ref|NP_345111.1|  transmembrane protein Vexp1 [Strept...   107   5e-22 

 gi|46321983|ref|ZP_00222356.1|  COG0577: ABC-type antimicrobial p...   107   5e-22 

 gi|2822200|gb|AAB97962.1|  ATP-binding cassette transporter-like ...   107   6e-22 

 gi|48864254|ref|ZP_00318147.1|  COG0577: ABC-type antimicrobial p...   107   6e-22 

 gi|15807941|ref|NP_285602.1|  hypothetical protein DRA0279 [Deino...   107   6e-22 

 gi|51891816|ref|YP_074507.1|  ABC transporter permease protein [S...   107   7e-22 

 gi|60492379|emb|CAH07145.1|  putative ABC transporter permease co...   107   8e-22 

 gi|23129990|ref|ZP_00111811.1|  COG0577: ABC-type antimicrobial p...   106   8e-22 

 gi|46190582|ref|ZP_00121322.2|  COG0577: ABC-type antimicrobial p...   106   8e-22 

 gi|56750336|ref|YP_171037.1|  ABC transporter permease protein [S...   106   9e-22 

 gi|53712796|ref|YP_098788.1|  ABC transporter permease [Bacteroid...   106   9e-22 

 gi|15076247|emb|CAC47800.1|  HYPOTHETICAL TRANSMEMBRANE PROTEIN [...   106   1e-21 

 gi|39997509|ref|NP_953460.1|  membrane protein, putative [Geobact...   106   1e-21 

 gi|23127807|ref|ZP_00109668.1|  COG0577: ABC-type antimicrobial p...   106   1e-21 

 gi|14246076|dbj|BAB56470.1|  similar to ABC transporter permease ...   106   1e-21 

 gi|57651232|ref|YP_185197.1|  ABC transporter, permease protein [...   106   1e-21 

 gi|56678117|gb|AAV94783.1|  ABC transporter, permease protein [Si...   106   1e-21 

 gi|22002528|gb|AAM82679.1|  DevC [Synechococcus sp. PCC 7942] >gi...   105   2e-21 

 gi|17549684|ref|NP_523024.1|  PROBABLE TRANSMEMBRANE PROTEIN [Ral...   105   2e-21 

 gi|15594427|ref|NP_212215.1|  hypothetical protein BB0081 [Borrel...   105   2e-21 

 gi|49243632|emb|CAG42056.1|  putative membrane protein [Staphyloc...   105   2e-21 

 gi|47575327|ref|ZP_00245362.1|  COG0577: ABC-type antimicrobial p...   105   3e-21 

 gi|695785|emb|CAA58844.1|  orf4 [Zymomonas mobilis]                    105   3e-21 

 gi|45656964|ref|YP_001050.1|  ABC transporter integral membrane p...   104   3e-21 

 gi|31792178|ref|NP_854671.1|  PROBABLE ADHESION COMPONENT TRANSPO...   104   3e-21 

 gi|35211983|dbj|BAC89359.1|  glr1418 [Gloeobacter violaceus PCC 7...   104   4e-21 

 gi|48859946|ref|ZP_00313874.1|  COG0577: ABC-type antimicrobial p...   104   4e-21 

 gi|24215682|ref|NP_713163.1|  hypothetical protein LA2983 [Leptos...   104   4e-21 

 gi|58579782|ref|YP_198798.1|  hypothetical protein XOO0159 [Xanth...   104   6e-21 

 gi|15607214|ref|NP_214586.1|  PROBABLE GLUTAMINE-TRANSPORT TRANSM...   104   6e-21 

 gi|19704684|ref|NP_604246.1|  ABC transporter permease protein [F...   104   6e-21 

 gi|56461160|ref|YP_156441.1|  ABC-type transport system, permease...   104   6e-21 

 gi|34105039|gb|AAQ61395.1|  probable oxidoreductase [Chromobacter...   104   7e-21 

 gi|23128822|ref|ZP_00110661.1|  COG0577: ABC-type antimicrobial p...   103   8e-21 

 gi|23100593|ref|NP_694060.1|  ABC transporter permease [Oceanobac...   103   1e-20 

 gi|42525141|ref|NP_970521.1|  ABC-type antimicrobial peptide tran...   103   1e-20 

 gi|57234374|ref|YP_181582.1|  ABC transporter, permease protein, ...   103   1e-20 

 gi|23112539|ref|ZP_00098011.1|  COG0577: ABC-type antimicrobial p...   103   1e-20 

 gi|48847887|ref|ZP_00302135.1|  COG0577: ABC-type antimicrobial p...   103   1e-20 

 gi|26246905|ref|NP_752945.1|  hypothetical protein c1016 [Escheri...   103   1e-20 

 gi|52009308|ref|ZP_00336672.1|  COG3127: Predicted ABC-type trans...   102   2e-20 

 gi|55275350|ref|YP_133872.1|  putative ABC-type permease [uncultu...   102   2e-20 

 gi|23129026|ref|ZP_00110860.1|  COG0577: ABC-type antimicrobial p...   102   2e-20 

 gi|56479010|ref|YP_160599.1|  ABC transporter, permease protein [...   102   2e-20 

 gi|53713662|ref|YP_099654.1|  putative ABC transporter permease [...   102   2e-20 

 gi|16801711|ref|NP_471979.1|  ftsX [Listeria innocua Clip11262] >...   101   3e-20 

 gi|52082059|ref|YP_080850.1|  cell-division protein [Bacillus lic...   101   3e-20 

 gi|16804544|ref|NP_466029.1|  hypothetical protein lmo2506 [Liste...   101   3e-20 

 gi|24427170|emb|CAD55331.1|  putative ABC transporter integral me...   101   3e-20 

 gi|52143010|ref|YP_083819.1|  ABC transporter, permease [Bacillus...   101   3e-20 

 gi|28373146|ref|NP_783744.1|  ABC transporter-associated permease...   101   3e-20 

 gi|30249376|ref|NP_841446.1|  DUF214 [Nitrosomonas europaea ATCC ...   101   4e-20 

 gi|46908678|ref|YP_015067.1|  cell division ABC transporter, perm...   101   4e-20 

 gi|22298186|ref|NP_681433.1|  devC-like ABC transporter permease ...   101   5e-20 

 gi|27468858|ref|NP_765495.1|  hypothetical protein SE1940 [Staphy...   101   5e-20 

 gi|2673752|emb|CAA05976.1|  membrane spanning subunit [Anabaena v...   101   5e-20 

 gi|27468040|ref|NP_764677.1|  hypothetical protein SE1122 [Staphy...   101   5e-20 

 gi|37963681|gb|AAR05977.1|  ORFY [Sphingomonas paucimobilis]           101   5e-20 

 gi|22536848|ref|NP_687699.1|  permease, putative [Streptococcus a...   101   5e-20 

 gi|27376112|ref|NP_767641.1|  probable ABC transporter permease p...   101   6e-20 

 gi|57865388|ref|YP_189510.1|  ABC transporter, permease protein [...   100   7e-20 

 gi|47570043|ref|ZP_00240704.1|  permease, putative domain protein...   100   7e-20 

 gi|42527026|ref|NP_972124.1|  permease, putative [Treponema denti...   100   8e-20 

 gi|52008131|ref|ZP_00335508.1|  COG0577: ABC-type antimicrobial p...   100   8e-20 

 gi|46134820|ref|ZP_00158755.2|  COG0577: ABC-type antimicrobial p...   100   1e-19 

 gi|61100113|ref|ZP_00375572.1|  ABC-transporter permease protein ...    99   1e-19 

 gi|1490223|emb|CAA67986.1|  devC [Anabaena sp.] >gi|25534659|pir|...    99   1e-19 

 gi|47778053|ref|YP_019120.2|  abc transporter, permease protein [...    99   1e-19 

 gi|57240581|ref|ZP_00368530.1|  probable ABC transport system per...    99   1e-19 

 gi|23125987|ref|ZP_00107899.1|  COG0577: ABC-type antimicrobial p...   100   1e-19 

 gi|29609091|dbj|BAC73143.1|  putative ABC transporter transmembra...   100   1e-19 

 gi|15894812|ref|NP_348161.1|  Predicted permease [Clostridium ace...   100   2e-19 

 gi|16801532|ref|NP_471800.1|  hypothetical protein lin2470 [Liste...   100   2e-19 

 gi|42781815|ref|NP_979062.1|  permease, putative [Bacillus cereus...   100   2e-19 

 gi|60492382|emb|CAH07148.1|  putative ABC transporter permease co...    99   2e-19 

 gi|39996362|ref|NP_952313.1|  ABC transporter, permease protein [...    99   2e-19 

 gi|21674047|ref|NP_662112.1|  hypothetical protein CT1222 [Chloro...    99   2e-19 

 gi|53712887|ref|YP_098879.1|  putative ABC transporter permease [...    99   2e-19 

 gi|38234858|ref|NP_940625.1|  Putative ABC transport system integ...    99   3e-19 

 gi|47564385|ref|ZP_00235430.1|  ABC transporter permease protein ...    99   3e-19 

 gi|25532823|pir||AF1907  hypothetical protein all0808 [imported] ...    98   3e-19 

 gi|25535424|pir||AI2261  hypothetical protein alr3648 [imported] ...    98   3e-19 

 gi|53712799|ref|YP_098791.1|  hypothetical protein BF1506 [Bacter...    98   4e-19 

 gi|59711492|ref|YP_204268.1|  ABC transporter permease protein [V...    98   4e-19 

 gi|61100523|ref|ZP_00375981.1|  ABC transporter permease protein ...    98   4e-19 

 gi|23335401|ref|ZP_00120637.1|  COG1136: ABC-type antimicrobial p...    98   5e-19 

 gi|42782322|ref|NP_979569.1|  ABC transporter, permease protein, ...    98   5e-19 

 gi|49478092|ref|YP_037331.1|  ABC transporter, permease [Bacillus...    98   5e-19 

 gi|41410304|ref|NP_963140.1|  hypothetical protein MAP4206c [Myco...    98   6e-19 

 gi|30021333|ref|NP_832964.1|  ABC transporter permease protein [B...    98   6e-19 

 gi|60492376|emb|CAH07142.1|  putative ABC transporter permease co...    98   6e-19 

 gi|33862861|ref|NP_894421.1|  ABC-transporter, membrane spanning ...    98   6e-19 

 gi|46193297|ref|ZP_00207642.1|  COG0577: ABC-type antimicrobial p...    98   6e-19 

 gi|16804409|ref|NP_465894.1|  hypothetical protein lmo2371 [Liste...    98   6e-19 

 gi|53764648|ref|ZP_00160587.2|  COG0577: ABC-type antimicrobial p...    98   6e-19 

 gi|23465931|ref|NP_696534.1|  large protein with N-terminal simil...    98   6e-19 

 gi|45507655|ref|ZP_00159998.1|  COG0577: ABC-type antimicrobial p...    97   8e-19 

 gi|53712793|ref|YP_098785.1|  hypothetical protein BF1500 [Bacter...    97   8e-19 

 gi|56421635|ref|YP_148953.1|  cell-division protein [Geobacillus ...    97   8e-19 

 gi|15672955|ref|NP_267129.1|  cell division protein [Lactococcus ...    97   1e-18 

 gi|52142300|ref|YP_084532.1|  ABC transporter, permease [Bacillus...    96   1e-18 

 gi|45916811|ref|ZP_00195843.2|  COG3127: Predicted ABC-type trans...    96   1e-18 

 gi|23126910|ref|ZP_00108791.1|  COG0577: ABC-type antimicrobial p...    96   1e-18 

 gi|49477720|ref|YP_036600.1|  ABC transporter, permease [Bacillus...    96   1e-18 

 gi|16332184|ref|NP_442912.1|  ABC-transporter DevC-like protein [...    96   1e-18 

 gi|16126329|ref|NP_420893.1|  hypothetical protein CC2090 [Caulob...    96   1e-18 

 gi|57160117|dbj|BAD86047.1|  predicted permease, containing FtsX ...    96   1e-18 

 gi|56962040|ref|YP_173762.1|  antimicrobial peptide ABC transport...    96   1e-18 

 gi|46908542|ref|YP_014931.1|  ABC transporter, permease protein [...    96   2e-18 

 gi|23474714|ref|ZP_00130006.1|  COG0577: ABC-type antimicrobial p...    96   2e-18 

 gi|16080578|ref|NP_391405.1|  cell-division protein [Bacillus sub...    96   2e-18 

 gi|29609966|dbj|BAC74014.1|  putative ABC-type antimicrobial pept...    96   2e-18 

 gi|46120941|ref|ZP_00201862.1|  COG3127: Predicted ABC-type trans...    96   2e-18 

 gi|17983900|gb|AAL53041.1|  hypothetical transmembrane oxidoreduc...    96   2e-18 

 gi|31789400|gb|AAP58516.1|  putative membrane component protein [...    96   2e-18 

 gi|29607288|dbj|BAC71347.1|  putative ABC transporter integral me...    96   2e-18 

 gi|23114069|ref|ZP_00099393.1|  COG0577: ABC-type antimicrobial p...    96   2e-18 

 gi|47528544|ref|YP_019893.1|  abc transporter, permease protein, ...    95   2e-18 

 gi|50954147|ref|YP_061435.1|  integral membrane protein [Leifsoni...    95   3e-18 

 gi|22957573|ref|ZP_00005270.1|  COG3127: Predicted ABC-type trans...    95   3e-18 

 gi|21401139|ref|NP_657124.1|  DUF214, Predicted permease [Bacillu...    95   3e-18 

 gi|47530728|ref|YP_022077.1|  cell division abc transporter, perm...    95   3e-18 

 gi|42519858|ref|NP_965788.1|  ABC transporter permease component ...    95   3e-18 

 gi|46190779|ref|ZP_00206566.1|  COG0577: ABC-type antimicrobial p...    95   4e-18 

 gi|42784335|ref|NP_981582.1|  cell division ABC transporter, perm...    95   4e-18 

 gi|51572912|gb|AAU06937.1|  conserved hypothetical protein [Borre...    95   4e-18 

 gi|23129054|ref|ZP_00110888.1|  COG0577: ABC-type antimicrobial p...    95   5e-18 

 gi|46140673|ref|ZP_00203703.1|  COG3127: Predicted ABC-type trans...    95   5e-18 

 gi|60493123|emb|CAH07904.1|  putative ABC transport system, membr...    95   5e-18 

 gi|25533348|pir||AF2427  hypothetical protein alr4974 [imported] ...    95   5e-18 

 gi|53686098|ref|ZP_00100069.2|  COG0577: ABC-type antimicrobial p...    95   5e-18 

 gi|15902711|ref|NP_358261.1|  Cell division protein FtsX [Strepto...    95   5e-18 

 gi|23124286|ref|ZP_00106284.1|  COG0577: ABC-type antimicrobial p...    94   6e-18 

 gi|55738870|gb|AAV62511.1|  ABC transporter permease protein [Str...    94   7e-18 

 gi|39937868|ref|NP_950144.1|  predicted permease [Rhodopseudomona...    94   8e-18 

 gi|51572910|gb|AAU06935.1|  hypothetical protein BG0077 [Borrelia...    94   8e-18 

 gi|42781574|ref|NP_978821.1|  ABC transporter, permease protein [...    94   8e-18 

 gi|29468278|gb|AAO85481.1|  lipoprotein releasing factor [Borreli...    94   8e-18 

 gi|23464871|ref|NP_695474.1|  ABC-type transporter similar to Vex...    94   9e-18 

 gi|53713442|ref|YP_099434.1|  ABC transporter permease protein [B...    94   9e-18 

 gi|34396794|gb|AAQ65859.1|  ABC transporter, permease protein, pu...    94   9e-18 

 gi|30023218|ref|NP_834849.1|  Cell division protein ftsX [Bacillu...    94   9e-18 

 gi|21400350|ref|NP_656335.1|  DUF214, Predicted permease [Bacillu...    93   1e-17 

 gi|27383098|ref|NP_774627.1|  hypothetical protein bll7987 [Brady...    93   1e-17 

 gi|56478520|ref|YP_160109.1|  hypothetical protein ebA5428 [Azoar...    93   1e-17 

 gi|15900651|ref|NP_345255.1|  cell division ABC transporter, perm...    93   1e-17 

 gi|48826663|ref|ZP_00287851.1|  COG0577: ABC-type antimicrobial p...    93   1e-17 

 gi|45507937|ref|ZP_00160278.1|  COG0577: ABC-type antimicrobial p...    93   1e-17 

 gi|33865620|ref|NP_897179.1|  ABC-transporter, membrane spanning ...    93   1e-17 

 gi|16077442|ref|NP_388256.1|  hypothetical protein BSU03740 [Baci...    93   1e-17 

 gi|46113626|ref|ZP_00183173.2|  COG0577: ABC-type antimicrobial p...    93   1e-17 

 gi|17936556|ref|NP_533346.1|  hypothetical protein Atu2681 [Agrob...    93   1e-17 

 gi|28900728|ref|NP_800383.1|  putative permease [Vibrio parahaemo...    93   2e-17 

 gi|53797633|ref|ZP_00358398.1|  COG0577: ABC-type antimicrobial p...    93   2e-17 

 gi|23468875|ref|ZP_00124210.1|  COG3127: Predicted ABC-type trans...    93   2e-17 

 gi|24377699|gb|AAN58999.1|  putative cell-division protein FtsX [...    92   3e-17 

 gi|28869466|ref|NP_792085.1|  permease, putative [Pseudomonas syr...    92   3e-17 

 gi|13473669|ref|NP_105237.1|  hypothetical protein mll4345 [Mesor...    92   3e-17 

 gi|47094575|ref|ZP_00232229.1|  ABC transporter, permease protein...    92   3e-17 

 gi|35211047|dbj|BAC88427.1|  gll0486 [Gloeobacter violaceus PCC 7...    92   3e-17 

 gi|5508818|gb|AAD43985.1|  AttG [Agrobacterium tumefaciens]             92   3e-17 

 gi|29338772|gb|AAO76572.1|  putative ABC transporter permease [Ba...    92   3e-17 

 gi|51245605|ref|YP_065489.1|  hypothetical protein DP1753 [Desulf...    92   3e-17 

 gi|29376398|ref|NP_815552.1|  permease, putative [Enterococcus fa...    92   3e-17 

 gi|32037915|ref|ZP_00136187.1|  COG3127: Predicted ABC-type trans...    92   4e-17 

 gi|56460867|ref|YP_156148.1|  ABC-type transport system, permease...    92   4e-17 

 gi|56472626|gb|EAL50096.1|  conserved hypothetical protein [Entam...    91   4e-17 

 gi|987093|emb|CAA60453.1|  orfW [Streptomyces hygroscopicus] >gi|...    91   4e-17 

 gi|46140477|ref|ZP_00203624.1|  COG0577: ABC-type antimicrobial p...    91   4e-17 

 gi|9948946|gb|AAG06246.1|  conserved hypothetical protein [Pseudo...    91   4e-17 

 gi|54032296|ref|ZP_00364428.1|  COG0577: ABC-type antimicrobial p...    91   5e-17 

 gi|32474619|ref|NP_867613.1|  conserved hypothetical protein-puta...    91   5e-17 

 gi|46446850|ref|YP_008215.1|  hypothetical protein pc1216 [Parach...    91   5e-17 

 gi|19571819|emb|CAD27338.1|  putative membrane component [Erwinia...    91   6e-17 

 gi|28379298|ref|NP_786190.1|  ABC transporter, permease protein (...    91   6e-17 

 gi|2340078|gb|AAB67302.1|  putative AttG [Agrobacterium tumefaciens]    91   7e-17 

 gi|53713334|ref|YP_099326.1|  putative ABC transporter permease [...    91   7e-17 

 gi|60493014|emb|CAH07794.1|  putative transporter permease protei...    91   8e-17 

 gi|51245607|ref|YP_065491.1|  hypothetical protein DP1755 [Desulf...    91   8e-17 

 gi|21230040|ref|NP_635957.1|  ABC transporter permease [Xanthomon...    90   8e-17 

 gi|60417939|dbj|BAD90606.1|  putative permease [Clostridium perfr...    90   9e-17 

 gi|25531533|pir||AD2137  ABC transporter permease protein all2651...    90   1e-16 

 gi|46201125|ref|ZP_00207976.1|  COG3127: Predicted ABC-type trans...    90   1e-16 

 gi|25530162|pir||AB2341  hypothetical protein alr4281 [imported] ...    90   1e-16 

 gi|60492377|emb|CAH07143.1|  putative ABC transporter permease co...    90   1e-16 

 gi|48825842|ref|ZP_00287079.1|  COG0577: ABC-type antimicrobial p...    90   1e-16 

 gi|48825773|ref|ZP_00287011.1|  COG0577: ABC-type antimicrobial p...    90   1e-16 

 gi|46114005|ref|ZP_00184233.2|  COG0577: ABC-type antimicrobial p...    90   1e-16 

 gi|29338841|gb|AAO76640.1|  conserved hypothetical protein [Bacte...    90   1e-16 

 gi|46205707|ref|ZP_00048178.2|  COG0577: ABC-type antimicrobial p...    90   1e-16 

 gi|21110023|gb|AAM38484.1|  ABC transporter permease [Xanthomonas...    90   2e-16 

 gi|25530284|pir||AB2474  hypothetical protein all5346 [imported] ...    90   2e-16 

 gi|33861306|ref|NP_892867.1|  ABC-transporter, membrane spanning ...    89   2e-16 

 gi|24375188|ref|NP_719231.1|  ABC transporter, permease protein [...    89   2e-16 

 gi|16801787|ref|NP_472055.1|  hypothetical protein lin2726 [Liste...    89   2e-16 

 gi|25010661|ref|NP_735056.1|  hypothetical protein gbs0596 [Strep...    89   2e-16 

 gi|50591750|ref|ZP_00333053.1|  COG2177: Cell division protein [S...    89   2e-16 

 gi|48861889|ref|ZP_00315788.1|  COG0577: ABC-type antimicrobial p...    89   2e-16 

 gi|24377471|gb|AAN58790.1|  putative ABC transporter, permease pr...    89   2e-16 

 gi|2340077|gb|AAB67301.1|  putative AttG [Agrobacterium tumefaciens]    89   3e-16 

 gi|16804619|ref|NP_466104.1|  hypothetical protein lmo2581 [Liste...    89   3e-16 

 gi|2967528|gb|AAC05799.1|  Orf217 [Buchnera aphidicola]                 89   3e-16 

 gi|47097203|ref|ZP_00234767.1|  ABC transporter, permease protein...    88   3e-16 

 gi|16803546|ref|NP_465031.1|  hypothetical protein lmo1506 [Liste...    88   3e-16 

 gi|48865631|ref|ZP_00319490.1|  COG0577: ABC-type antimicrobial p...    88   4e-16 

 gi|48765857|ref|ZP_00270407.1|  COG0577: ABC-type antimicrobial p...    88   4e-16 

 gi|58338087|ref|YP_194672.1|  putative ABC transporter permease p...    88   5e-16 

 gi|53765495|ref|ZP_00161853.2|  COG0577: ABC-type antimicrobial p...    88   5e-16 

 gi|42519785|ref|NP_965715.1|  ABC transporter permease component ...    88   5e-16 

 gi|46907734|ref|YP_014123.1|  ABC transporter, permease protein [...    88   5e-16 

 gi|60492374|emb|CAH07140.1|  putative permease component of ABC t...    88   5e-16 

 gi|33237798|gb|AAP99865.1|  DevC-like ABC transporter permease co...    88   5e-16 

 gi|46908752|ref|YP_015141.1|  ABC transporter, permease protein [...    88   6e-16 

 gi|9658205|gb|AAF96679.1|  conserved hypothetical protein [Vibrio...    88   6e-16 

 gi|45508143|ref|ZP_00160483.1|  COG0577: ABC-type antimicrobial p...    88   6e-16 

 gi|16800609|ref|NP_470877.1|  hypothetical protein lin1541 [Liste...    88   6e-16 

 gi|53712803|ref|YP_098795.1|  hypothetical protein BF1510 [Bacter...    88   6e-16 

 gi|47096764|ref|ZP_00234347.1|  ABC transporter, permease protein...    88   7e-16 

 gi|50084259|ref|YP_045769.1|  conserved hypothetical protein; put...    87   7e-16 

 gi|46113659|ref|ZP_00200854.1|  COG0577: ABC-type antimicrobial p...    87   8e-16 

 gi|21904181|gb|AAM79063.1|  putative cell-division protein [Strep...    87   9e-16 

 gi|22536306|ref|NP_687157.1|  permease, putative [Streptococcus a...    87   9e-16 

 gi|25010194|ref|NP_734589.1|  hypothetical protein gbs0119 [Strep...    87   9e-16 









Alignments

>gi|4062688|dbj|BAA35936.1|   Hypothetical protein HI1555 [Escherichia coli K12]
          Length = 416

 Score =  340 bits (872), Expect = 6e-92
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL
Sbjct: 18  MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 77

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA
Sbjct: 78  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 137

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
           QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS
Sbjct: 138 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 197

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
           QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL
Sbjct: 198 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 257

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
           PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL
Sbjct: 258 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 317

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
           QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI
Sbjct: 318 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 377

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE
Sbjct: 378 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 416



>gi|26247260|ref|NP_753300.1|   Lipoprotein releasing system transmembrane protein lolC
           [Escherichia coli CFT073]
 gi|26107661|gb|AAN79860.1|   Lipoprotein releasing system transmembrane protein lolC
           [Escherichia coli CFT073]
 gi|16129079|ref|NP_415634.1|   transport protein of outer membrane lipoproteins (ABC superfamily,
           membrane) [Escherichia coli K12]
 gi|1787360|gb|AAC74200.1|   orf, hypothetical protein; transport protein of outer membrane
           lipoproteins (ABC superfamily, membrane) [Escherichia
           coli K12]
 gi|12514666|gb|AAG55862.1|   orf, hypothetical protein [Escherichia coli O157:H7 EDL933]
 gi|13360958|dbj|BAB34917.1|   hypothetical protein [Escherichia coli O157:H7]
 gi|25321150|pir||F90815   Lipoprotein releasing system transmembrane protein ECs1494 -
           Escherichia coli (strain O157:H7, substrain RIMD
           0509952)
 gi|7449107|pir||A64856   Lipoprotein releasing system transmembrane protein ycfU -
           Escherichia coli (strain K-12)
 gi|25321151|pir||B85675   Lipoprotein releasing system transmembrane protein ycfU -
           Escherichia coli (strain O157:H7, substrain EDL933)
 gi|15830748|ref|NP_309521.1|   hypothetical protein ECs1494 [Escherichia coli O157:H7]
 gi|2829636|sp|P75956|LOLC_ECOLI   Lipoprotein releasing system transmembrane protein lolC
 gi|15801233|ref|NP_287250.1|   hypothetical protein Z1757 [Escherichia coli O157:H7 EDL933]
          Length = 399

 Score =  336 bits (862), Expect = 7e-91
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL
Sbjct: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA
Sbjct: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
           QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS
Sbjct: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
           QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL
Sbjct: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
           PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL
Sbjct: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
           QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI
Sbjct: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE
Sbjct: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399



>gi|56479828|ref|NP_707031.2|   hypothetical protein SF1120 [Shigella flexneri 2a str. 301]
 gi|56383379|gb|AAN42738.2|   orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30062649|ref|NP_836820.1|   hypothetical protein S1200 [Shigella flexneri 2a str. 2457T]
 gi|30040897|gb|AAP16627.1|   hypothetical protein S1200 [Shigella flexneri 2a str. 2457T]
          Length = 399

 Score =  333 bits (854), Expect = 6e-90
 Identities = 396/399 (99%), Positives = 397/399 (99%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRA DRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL
Sbjct: 1   MYQPVALFIGLRYMRGRAVDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA
Sbjct: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
           QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS
Sbjct: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
           QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPA NITGWRLWLDEPL+VDSLSQQKL
Sbjct: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAANITGWRLWLDEPLRVDSLSQQKL 240

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
           PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL
Sbjct: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
           QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI
Sbjct: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE
Sbjct: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399



>gi|29142137|ref|NP_805479.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 gi|16760092|ref|NP_455709.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|62127370|gb|AAX65073.1|   ABC transporter, integral membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|16419735|gb|AAL20146.1|   integral membrane protein ABC transporter [Salmonella typhimurium
           LT2]
 gi|29137766|gb|AAO69328.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 gi|16502386|emb|CAD08341.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|25321153|pir||AB0645   ABC transporter integral membrane chain STY1257 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
          Length = 436

 Score =  332 bits (852), Expect = 1e-89
 Identities = 374/399 (93%), Positives = 390/399 (97%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL
Sbjct: 38  MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 97

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           GLMPQAILS+EHGSLNP Q+PE AV L GVNR+AP+TTGDVVLQSARSVAVGVMLGIDPA
Sbjct: 98  GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIAPLTTGDVVLQSARSVAVGVMLGIDPA 157

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
           QKDPLTPYLVNVKQ++L+PGKYNVILGEQLA QLGVNRGDQIR+MVPSASQFTPMGR+PS
Sbjct: 158 QKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMGRLPS 217

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
           QRLF VIGTFAANSEVDGYEMLVNI+DASRLMRYPAGNITGWRLWLDEPL+VD+LSQQ L
Sbjct: 218 QRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLSQQTL 277

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
           P+G+KWQDWR+RKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL
Sbjct: 278 PQGTKWQDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 337

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
           QTQGLTPRQIMMVFMVQGASAGIIGA+LGAALGALLASQLNNLMPIIG  LDGAALPVAI
Sbjct: 338 QTQGLTPRQIMMVFMVQGASAGIIGALLGAALGALLASQLNNLMPIIGAFLDGAALPVAI 397

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE
Sbjct: 398 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 436



>gi|56413797|ref|YP_150872.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
 gi|56128054|gb|AAV77560.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
          Length = 436

 Score =  332 bits (851), Expect = 1e-89
 Identities = 374/399 (93%), Positives = 390/399 (97%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL
Sbjct: 38  MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 97

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           GLMPQAILS+EHGSLNP Q+PE AV L GVNR+AP+TTGDVVLQSARSVAVGVMLGIDPA
Sbjct: 98  GLMPQAILSAEHGSLNPSQMPEKAVNLQGVNRIAPLTTGDVVLQSARSVAVGVMLGIDPA 157

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
           QKDPLTPYLVNVKQ++L+PGKYNVILGEQLA QLGVNRGDQIR+MVPSASQFTPMGR+PS
Sbjct: 158 QKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMGRLPS 217

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
           QRLF VIGTFAANSEVDGYEMLVNI+DASRLMRYPAGNITGWRLWLDEPL+VD+LSQQ L
Sbjct: 218 QRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLSQQTL 277

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
           P+G+KWQDWR+RKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL
Sbjct: 278 PQGTKWQDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 337

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
           QTQGLTPRQIMMVFMVQGASAGIIGA+LGAALGALLASQLNNLMPIIG  LDGAALPVAI
Sbjct: 338 QTQGLTPRQIMMVFMVQGASAGIIGALLGAALGALLASQLNNLMPIIGAFLDGAALPVAI 397

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE
Sbjct: 398 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 436



>gi|39546312|ref|NP_460187.2|   integral membrane protein [Salmonella typhimurium LT2]
          Length = 399

 Score =  330 bits (847), Expect = 4e-89
 Identities = 374/399 (93%), Positives = 390/399 (97%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL
Sbjct: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           GLMPQAILS+EHGSLNP Q+PE AV L GVNR+AP+TTGDVVLQSARSVAVGVMLGIDPA
Sbjct: 61  GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIAPLTTGDVVLQSARSVAVGVMLGIDPA 120

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
           QKDPLTPYLVNVKQ++L+PGKYNVILGEQLA QLGVNRGDQIR+MVPSASQFTPMGR+PS
Sbjct: 121 QKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMGRLPS 180

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
           QRLF VIGTFAANSEVDGYEMLVNI+DASRLMRYPAGNITGWRLWLDEPL+VD+LSQQ L
Sbjct: 181 QRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLSQQTL 240

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
           P+G+KWQDWR+RKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL
Sbjct: 241 PQGTKWQDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
           QTQGLTPRQIMMVFMVQGASAGIIGA+LGAALGALLASQLNNLMPIIG  LDGAALPVAI
Sbjct: 301 QTQGLTPRQIMMVFMVQGASAGIIGALLGAALGALLASQLNNLMPIIGAFLDGAALPVAI 360

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE
Sbjct: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399



>gi|54309557|ref|YP_130577.1|   putative ABC transporter integral membrane subunit [Photobacterium
           profundum SS9]
 gi|46913993|emb|CAG20775.1|   putative ABC transporter integral membrane subunit [Photobacterium
           profundum]
          Length = 402

 Score =  322 bits (826), Expect = 1e-86
 Identities = 225/402 (55%), Positives = 308/402 (76%), Gaps = 3/402 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+ PV+ FIGLRY+RGR+ DRF RFVS++ST GIT+GV++LVTVLSVMNGFE++L++ IL
Sbjct: 1   MFHPVSFFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVLSLVTVLSVMNGFEQQLKDRIL 60

Query: 61  GLMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G++PQA++S + G +     +P++  +L  V  V PIT G+ VLQSA S+A G M+GIDP
Sbjct: 61  GVLPQAVISQDDGRMPVSDTIPQSLQQLPHVTHVTPITRGEAVLQSASSLAAGNMIGIDP 120

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
           +  +P+   +   K  +L  G Y V++G+ LA+QLGV  GD+IR+MV SASQ+TP+GRIP
Sbjct: 121 SYYEPIAMDMTVGKLDNLISGSYRVVIGQALANQLGVQVGDKIRLMVTSASQYTPLGRIP 180

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           SQR F + G F   S+VD   +L NI+DA +L+RY A  ITGWRL+LD+P  V  L+Q  
Sbjct: 181 SQRNFTIEGFFDTGSDVDKQLILTNIQDAGKLLRYKADQITGWRLFLDDPFAVTELAQVS 240

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
           +P   +W DWR+++GELFQAV+MEKNMMGL+L LI+ VAAFNII++L ++VMEKQ EVAI
Sbjct: 241 MPNDWQWSDWREQRGELFQAVKMEKNMMGLMLGLIIGVAAFNIISALIMVVMEKQAEVAI 300

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLL--DGAALP 357
           L+TQG+T RQ++MVFMVQGAS+G+IGA+ G  LG LLAS LN +M + GV     G +LP
Sbjct: 301 LKTQGMTNRQVLMVFMVQGASSGVIGAVSGGVLGILLASNLNTVMSVFGVQYLMAGGSLP 360

Query: 358 VAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           + IEPLQV+ + L A+ ++L++T++PS+RAA+ +PAEALRYE
Sbjct: 361 IVIEPLQVMFVILGAILLSLIATIFPSYRAASVRPAEALRYE 402



>gi|9949086|gb|AAG06374.1|   conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|11347965|pir||C83271   conserved hypothetical protein PA2986 [imported] - Pseudomonas
           aeruginosa (strain PAO1)
 gi|15598182|ref|NP_251676.1|   hypothetical protein PA2986 [Pseudomonas aeruginosa PAO1]
          Length = 433

 Score =  315 bits (807), Expect = 2e-84
 Identities = 154/415 (37%), Positives = 246/415 (59%), Gaps = 17/415 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+  FIGLRY R +  + +  F+S  S IG+ LGV+A++ VLSVMNGF++E++  IL
Sbjct: 20  MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 79

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++P A +S+     + Q +   A++   V   AP      +L    ++   ++ GIDP 
Sbjct: 80  GMVPHATISAAQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDPQ 139

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           ++  ++    ++V     DL+PG++ ++LGE  A +  VN GD++ ++VP A+   P G 
Sbjct: 140 EERKVSIVGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSA-PGGI 198

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
            P  + F ++  F   +E+D    L++I DA +L+R   G +   RL L +  +   ++ 
Sbjct: 199 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 258

Query: 238 QK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
           +    L +G +  DW   +G LF A++MEK M+GLLL LI+AVAAFNII +L ++V +K+
Sbjct: 259 KVVKELGQGFRSSDWTRTQGSLFNAMKMEKTMIGLLLLLIIAVAAFNIIATLIMVVADKR 318

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------ 348
            ++AIL+T G TPRQIM +FMVQG   G+IG ++G  LG   A  +  ++  I       
Sbjct: 319 TDIAILRTLGATPRQIMAIFMVQGTVIGVIGTVIGGVLGVFAALNITGMIDRIERLVGHK 378

Query: 349 ----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                +     LP  ++ L V++I   A+ ++ L+TLYPSWRAA TQPAE+LRYE
Sbjct: 379 VFSSDVYFINYLPSDLQVLDVVLICSAALLMSFLATLYPSWRAARTQPAESLRYE 433



>gi|53759518|ref|ZP_00172493.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Methylobacillus flagellatus
           KT]
          Length = 421

 Score =  312 bits (800), Expect = 1e-83
 Identities = 155/416 (37%), Positives = 240/416 (57%), Gaps = 22/416 (5%)

Query: 4   PVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLM 63
           P  LF+GLRY R +  + F  F+S  S IGI LGV AL+ VLSVMNGF+ EL+N ILG+ 
Sbjct: 8   PFELFVGLRYTRAKRRNHFISFISLTSMIGIGLGVAALIVVLSVMNGFQEELRNRILGVA 67

Query: 64  PQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQK 122
               ++     L + + L +       V   AP      +L  ++SV   ++ G+ P  +
Sbjct: 68  SHLQITGPDNVLEDWRSLEQKVKGAPHVQAAAPYVMAQGMLSFSQSVQGAIIRGVLPDAE 127

Query: 123 DPL---TPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
           D +     ++   +  DL+PG++ V+LG +LA  LGV  GD++ +M P   QFTP G +P
Sbjct: 128 DKVAELGSHMRAGRLQDLKPGEFGVVLGAELAQSLGVVLGDKVVLMAPQG-QFTPTGVVP 186

Query: 180 SQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
             + F V+G F     E D    L++++DA+RL R    N++G RL LD+     ++++Q
Sbjct: 187 RIKQFTVVGVFEIGMFEYDSGLALIHLDDAARLYRM-GENVSGVRLKLDDLFNAPAVARQ 245

Query: 239 KLP-----EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
                         DW  +    F+A++MEK +M ++L+LIVAVAAFNI+++L + V +K
Sbjct: 246 LGERLMGTGNYYISDWTQQHANFFRAIQMEKRVMFIILALIVAVAAFNIVSTLVMAVTDK 305

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDG 353
           + ++AI++T G++PR IM +F+VQGA  G+IG + GA  G L+A  ++ ++P+I  +   
Sbjct: 306 RADIAIMRTFGVSPRSIMQIFIVQGALIGMIGTVAGAFFGVLIALNIDTVVPMIERMFGV 365

Query: 354 AA----------LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                       LP  +    V VI +++  ++LL+TLYPSWRAA   PAEALRYE
Sbjct: 366 QFLAKDVYYISDLPSRLLWSDVTVIVVLSFVLSLLATLYPSWRAAKVNPAEALRYE 421



>gi|28897751|ref|NP_797356.1|   hypothetical protein VP0977 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28805964|dbj|BAC59240.1|   conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 405

 Score =  312 bits (799), Expect = 1e-83
 Identities = 204/402 (50%), Positives = 293/402 (72%), Gaps = 3/402 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MY P++LFIGLRY+RGR+ DRF RFVS++ST GIT+GVMALVTVLSVMNGFE +L+  IL
Sbjct: 4   MYHPISLFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFEAQLKERIL 63

Query: 61  GLMPQAILSSEHGSLNP-QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G++P A++S   G     +  P+    +  V    P+  G+ V+QS+  +  G ++GI+P
Sbjct: 64  GVLPHAVISQHDGRTPLTESAPQFIQAMSDVAEPEPVVRGEAVIQSSAQLTAGYLIGIEP 123

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
            + DP+  +L+  + + L+ G+Y V LG  LA  L V+ GD++R+MV +A+QFTP+GRIP
Sbjct: 124 KKGDPIANHLIAGRLSSLQAGEYKVFLGHSLARSLKVSIGDKVRLMVTNATQFTPLGRIP 183

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           SQR F V G F   S+VDG  M+VN+ DA++LMR P   ++GWR++  +P  V   + + 
Sbjct: 184 SQRNFTVAGIFNTGSDVDGQLMIVNMADAAKLMRLPKDTVSGWRVFFSDPFMVTDFADKP 243

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
           +PEG +W DWR ++GELFQAV+MEKNMMGL+L LIV VAAFNII++L ++VMEKQ EVAI
Sbjct: 244 MPEGWQWSDWRAQRGELFQAVKMEKNMMGLMLGLIVGVAAFNIISALIMVVMEKQSEVAI 303

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV--LLDGAALP 357
           L+TQG+T  Q+M +FMVQGAS+G+IGAI+G A+G  L+  LN ++   GV     G  LP
Sbjct: 304 LKTQGMTQSQVMTIFMVQGASSGVIGAIVGGAVGVALSLNLNVILESAGVALFSFGGHLP 363

Query: 358 VAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           + I+  Q++++ ++A+A++L +T+YPS+RA++ +PAEALRYE
Sbjct: 364 IVIDSFQILLVVVLAIALSLAATVYPSYRASSVKPAEALRYE 405



>gi|9949088|gb|AAG06376.1|   conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|46163960|ref|ZP_00204928.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|11347966|pir||E83271   conserved hypothetical protein PA2988 [imported] - Pseudomonas
           aeruginosa (strain PAO1)
 gi|15598184|ref|NP_251678.1|   hypothetical protein PA2988 [Pseudomonas aeruginosa PAO1]
          Length = 416

 Score =  311 bits (798), Expect = 2e-83
 Identities = 152/417 (36%), Positives = 241/417 (57%), Gaps = 19/417 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+++FIG RY R +    F  F+S  S IG+ LGV+ ++ VLSVMNGF+RE++  IL
Sbjct: 1   MFRPLSVFIGTRYTRAKRRSHFVSFISLTSMIGLALGVLVMIVVLSVMNGFDREMRTRIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++PQA + S     + + L E     + V  VAP T    +L +  +V   ++  +DP 
Sbjct: 61  GMVPQATVESYQPIDDWRALAEKVKAHEHVTAVAPFTQMQGMLSANGAVQTVMVDAVDPL 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           ++  ++    +       +L+ G + +++G+  A +LGV  GD++ +++P     TP G 
Sbjct: 121 EEAKVSIIPDFFKQGSLAELKAGGFGIVIGQLAAQKLGVGIGDKVTLILPEV-AVTPAGV 179

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD--- 233
            P  + F V+GTF     E+DG   L+++EDA+RL R+    + G RL LD+  +     
Sbjct: 180 FPRMKRFTVVGTFRVGAGELDGGLSLIHLEDAARLQRWKTNQVQGLRLKLDDLFQAPRVA 239

Query: 234 -SLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
             +++         +DW    G L+QA+RMEK M+GLLL LIVAVAAFNII++L ++V +
Sbjct: 240 WEIARTLTDNDFYARDWTRSHGNLYQAIRMEKTMIGLLLLLIVAVAAFNIISTLVMVVTD 299

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG---- 348
           K+ ++AIL+T G TP QIM  FMVQG   G+IG ++G  LG + A  ++  +  +     
Sbjct: 300 KKSDIAILRTLGATPGQIMATFMVQGTVIGVIGTLVGGVLGVVAALNVSAWISALEKLLG 359

Query: 349 ------VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +     LP  +    V+++   A+ ++  +TLYP+WRAA TQPAEALRYE
Sbjct: 360 HQFLASDVYFIDYLPSQLMLDDVVLVCGAALVLSFFATLYPAWRAARTQPAEALRYE 416



>gi|48787803|ref|ZP_00283782.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Burkholderia fungorum
           LB400]
          Length = 417

 Score =  310 bits (794), Expect = 6e-83
 Identities = 151/420 (35%), Positives = 227/420 (54%), Gaps = 24/420 (5%)

Query: 1   MYQPVALFIGLRYMRGRAA---DRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M  P    IG RY R       + F  F++ +S  GI LGV AL+ VLSVMNGF++E+++
Sbjct: 1   MKFPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  NILGLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
            +L ++    + S  GS+ N Q   + A +   V   AP      +L    +V+   + G
Sbjct: 61  RMLSVLAHVEIFSPTGSMPNWQLTAQEARQNKEVIGAAPYVEAQALLTRQDAVSGVALRG 120

Query: 117 IDPAQKDPLTPYLVNVKQTDLE---PGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
           ++P+ +  ++     +K   L    PG + ++LG  LA+ LGV   D+I ++ P  +  T
Sbjct: 121 VEPSLEPQVSDIGKEMKGGSLNALVPGDFGIVLGADLATNLGVTVNDKITLVAPEGT-IT 179

Query: 174 PMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV 232
           P G +P  + F V+G F +   E D    L+NI+DA  L R PA   TG RL L +  + 
Sbjct: 180 PAGMLPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLPAP--TGVRLRLTDMQRA 237

Query: 233 DSLSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLM 289
             ++ Q    L      +DW  +    F AV++EK MM ++L+LI+AVAAFN+++SL + 
Sbjct: 238 PEVAHQLARSLSGDLYIRDWTQQNKTWFSAVQIEKRMMFIILTLIIAVAAFNLVSSLVMT 297

Query: 290 VMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV 349
           V  KQ ++AIL+T G  P  IM +F+VQG + G IG   G ALG L+A  +  L+P+I  
Sbjct: 298 VTNKQADIAILRTLGAQPGSIMKIFVVQGVTIGFIGTATGVALGCLIAWSIPWLVPMIEH 357

Query: 350 L----------LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           L             + LP  + P  V  I ++A  ++ L+TLYPSWR A  +PAEALRYE
Sbjct: 358 LLGVQFLPPSVYFISELPSELIPADVARIGIIAFLMSALATLYPSWRGAKVRPAEALRYE 417



>gi|46163958|ref|ZP_00136329.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 414

 Score =  309 bits (792), Expect = 9e-83
 Identities = 154/415 (37%), Positives = 246/415 (59%), Gaps = 17/415 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+  FIGLRY R +  + +  F+S  S IG+ LGV+A++ VLSVMNGF++E++  IL
Sbjct: 1   MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++P A +S+     + Q +   A++   V   AP      +L    ++   ++ GIDP 
Sbjct: 61  GMVPHATISATQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDPQ 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           ++  ++    ++V     DL+PG++ ++LGE  A +  VN GD++ ++VP A+   P G 
Sbjct: 121 EERKVSIIGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSA-PGGI 179

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
            P  + F ++  F   +E+D    L++I DA +L+R   G +   RL L +  +   ++ 
Sbjct: 180 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 239

Query: 238 QK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
           +    L +G +  DW   +G LF A++MEK M+GLLL LI+AVAAFNII +L ++V +K+
Sbjct: 240 KVVKELGQGFRSSDWTRTQGSLFNAMKMEKTMIGLLLLLIIAVAAFNIIATLIMVVADKR 299

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------ 348
            ++AIL+T G TPRQIM +FMVQG   G+IG ++G  LG   A  +  ++  I       
Sbjct: 300 TDIAILRTLGATPRQIMAIFMVQGTVIGVIGTVIGGVLGVFAALNITGMIDRIERLVGHK 359

Query: 349 ----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                +     LP  ++ L V++I   A+ ++ L+TLYPSWRAA TQPAE+LRYE
Sbjct: 360 VFSSDVYFINYLPSDLQVLDVVLICSAALLMSFLATLYPSWRAARTQPAESLRYE 414



>gi|28869314|ref|NP_791933.1|   lipoprotein releasing system transmembrane protein LolE
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28852555|gb|AAO55628.1|   lipoprotein releasing system transmembrane protein LolE
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 427

 Score =  309 bits (792), Expect = 1e-82
 Identities = 156/415 (37%), Positives = 242/415 (58%), Gaps = 17/415 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+ LFIG+RY R +    F  F+S  S IG+ LGV+A++ VLSVMNGF+RE+ + IL
Sbjct: 14  MFRPLPLFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 73

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++P A+++      + + L E A+K   V    P T  + +L    S+    + G+DPA
Sbjct: 74  GMVPHAVIAGAKPVDDWKPLAEAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDPA 133

Query: 121 QK---DPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            +     +T ++      DL+PG++ V+LG+  A +  +  GD++ ++VP  S   P G 
Sbjct: 134 LEHEVSIVTQHITRGSLADLKPGEFGVVLGDLTARRFRLTIGDKLTLIVPEVSSA-PGGI 192

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
            P  +   V+G F   +E+DG   L+NI DA+++ R+    + G RL L +  K   +S 
Sbjct: 193 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPDQVQGVRLALKDLYKAPQVST 252

Query: 238 QK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                L EG    DW   +G LF A++MEK M+GLLL +IVAVAAFNII +L ++V +K 
Sbjct: 253 AIASGLGEGYHADDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVNDKG 312

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------ 348
            ++AIL+T G TPRQIM +FMVQG   GI+G ++G  LG + A  +++L+  I       
Sbjct: 313 ADIAILRTIGATPRQIMAIFMVQGTVIGIVGTLIGGVLGIIAALNVSSLVGWIERVSGQH 372

Query: 349 ----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                +   + LP  ++   V++I      ++ L+T+YP+WRAA  +PA ALRYE
Sbjct: 373 IFSSDVYFISNLPSELQGGDVLLICSAGFILSFLATVYPAWRAAQIEPAHALRYE 427



>gi|53611016|ref|ZP_00342213.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Azotobacter vinelandii]
          Length = 416

 Score =  309 bits (791), Expect = 1e-82
 Identities = 152/417 (36%), Positives = 240/417 (57%), Gaps = 19/417 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+++FIGLRY   +  + F  F+S  S IG+ LGV+ ++ VLSVMNGF+ E++  +L
Sbjct: 1   MFRPLSVFIGLRYTGAKRRNHFVSFISLTSMIGLALGVLVMIVVLSVMNGFDHEMRTRVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++P A + S     + + L   A     V  VAP T    +L     V   ++  +DPA
Sbjct: 61  GMVPHATIESPVPIDDWRSLAAQARTHPQVVAVAPFTQVQGLLTHDGQVQKVLINAVDPA 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            +  ++    +        L+PG + +++G++ A++LGV  GD++  + P     TP G 
Sbjct: 121 LEPHVSIIGDFFRQGGLAALQPGGFGILIGDKAAAKLGVGIGDRVTFIAPEV-AVTPAGM 179

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD--- 233
            P  + F V G F     E+DGY  + +++D  RL R+ +G + G RL   +  +     
Sbjct: 180 FPRMKRFTVQGIFHVGAGELDGYVAMAHLDDIGRLQRWKSGQVQGLRLRFADLFQAPRTA 239

Query: 234 -SLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
            +++++        +DW    G L+QA+RMEKNM+GLLL LIVAVAAFNII++L ++V +
Sbjct: 240 WAIAERLKGGDFYARDWTRSHGNLYQAIRMEKNMIGLLLLLIVAVAAFNIISTLVMVVTD 299

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL-- 350
           K+G++AIL+T G TP QIM  FMVQG   G+IG ++G ALG L A  + + +  +  L  
Sbjct: 300 KKGDIAILRTLGATPAQIMATFMVQGTVIGVIGTLIGGALGILAALNIGSWIAALEGLLG 359

Query: 351 --------LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                        LP  +    V+++   A++++ L+TLYP+WRAA T+PAEALRYE
Sbjct: 360 HKFLSADVYFIDYLPSQLMGEDVLLVCGAALSLSFLATLYPAWRAARTRPAEALRYE 416



>gi|28869312|ref|NP_791931.1|   lipoprotein releasing system transmembrane protein LolC
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28852553|gb|AAO55626.1|   lipoprotein releasing system transmembrane protein LolC
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 416

 Score =  308 bits (789), Expect = 2e-82
 Identities = 154/417 (36%), Positives = 240/417 (57%), Gaps = 19/417 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+ +FIG RY R +  + F  F+S  S IG+ LGV+ ++ VLSVMNGF+ E++  +L
Sbjct: 1   MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++P A + S     + + L     +   V  VAP T    +L     V   ++ GI+PA
Sbjct: 61  GMVPHATIESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGINPA 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           ++  ++    ++   +   L  G + +++G++ A++LGV  GD++  + P  +  TP G 
Sbjct: 121 EERKVSIIDHFIQQGQLDSLSAGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVT-VTPAGM 179

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD--- 233
            P  + F V G F     E+DG+  L N++D +RL R+    + G RL  D+        
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPDQVQGLRLKFDDLFAAPRTS 239

Query: 234 -SLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
             ++Q+        +DW    G L+QA+RMEK M+GLLL LIVAVAAFNII++L ++V +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVND 299

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL-- 350
           K+G++AIL+T G TPRQIM +FMVQG   G++G ++GAALG L A  ++  + ++  L  
Sbjct: 300 KKGDIAILRTLGATPRQIMAIFMVQGTVIGVVGTLIGAALGILAALNVSAAISMLEGLIG 359

Query: 351 --------LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                        LP  +    V  +   A+ ++ L+TLYP+WRAA TQPAEALRYE
Sbjct: 360 HKFLNADVYFIDYLPSQLMAQDVFQVCGAALVLSFLATLYPAWRAARTQPAEALRYE 416



>gi|17428130|emb|CAD14819.1|   PROBABLE LIPOPROTEIN RELEASING SYSTEM TRANSMEMBRANE [Ralstonia
           solanacearum]
 gi|17545836|ref|NP_519238.1|   PROBABLE LIPOPROTEIN RELEASING SYSTEM TRANSMEMBRANE [Ralstonia
           solanacearum GMI1000]
          Length = 416

 Score =  307 bits (787), Expect = 4e-82
 Identities = 143/419 (34%), Positives = 226/419 (53%), Gaps = 23/419 (5%)

Query: 1   MYQPVALFIGLRYMRGRAA---DRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M  P    IG RY R       + F  F+S +S +GI LGV AL+ VLSVMNGF++E+++
Sbjct: 1   MKFPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  NILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGI 117
            +L ++    + +     + Q+    A++   V   AP      ++    +V   ++ G+
Sbjct: 61  RMLSVLSHIEIMAPGSLPDWQRTANEAMQNKEVVGAAPYVGAQAMITRDDAVRGVLLRGV 120

Query: 118 DPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTP 174
            PA +  ++    + K     DL PG++ + LG ++A  LGV +GD++ ++ P  +  TP
Sbjct: 121 SPADEPKVSDIAKDFKSGTIDDLRPGEFGIALGAEMARGLGVRQGDKVTLVAPQGT-ITP 179

Query: 175 MGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD 233
            G +P  + F VIGTF +   E D    L+N+EDA RL R      TG RL L +  +  
Sbjct: 180 AGVLPRLKQFTVIGTFESGHYEFDSSLALINMEDAERLFRLTGP--TGVRLKLVDMQRAP 237

Query: 234 SLSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMV 290
            +++     L      +DW  +    F AV+ EK MM ++L+LI+AVAAFN++++L + V
Sbjct: 238 QVAEALSRTLTGELYIRDWSRQNKNWFAAVQTEKKMMFIILTLIIAVAAFNLVSTLVMTV 297

Query: 291 MEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL 350
            +KQ ++AIL+T G  P  IM +F+VQG + G IG +LG   G L+A  ++ ++P I  L
Sbjct: 298 TDKQADIAILRTMGAQPGSIMKIFIVQGVAIGFIGTLLGVLFGTLIAYNIDVIVPAIEHL 357

Query: 351 LDGAALPVAIEPL----------QVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                LP  I  +           +  I L++  +A ++TLYPSW A+   PAEALRYE
Sbjct: 358 FGVQFLPKDIYFISELPSDPRVNDIATIGLISFVLASVATLYPSWHASRVNPAEALRYE 416



>gi|26988878|ref|NP_744303.1|   lipoprotein releasing system, permease protein [Pseudomonas putida
           KT2440]
 gi|24983686|gb|AAN67767.1|   lipoprotein releasing system, permease protein [Pseudomonas putida
           KT2440]
          Length = 416

 Score =  305 bits (781), Expect = 2e-81
 Identities = 162/417 (38%), Positives = 244/417 (58%), Gaps = 19/417 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+  FIG RY R +  + F  F+S  S IG+ LGV+ ++ VLSVMNGF+ E++  +L
Sbjct: 1   MFRPLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++P A L S     + Q L +   +   V  VAP T    +L     V   ++ GIDPA
Sbjct: 61  GMIPHATLESGQPIADWQALAQQVKQNPQVVAVAPFTQMQGLLTHDGKVQKVLLNGIDPA 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           ++  ++    +++  +   L PG++ +++G++ A++LGV  GD++  + P  S  TP G 
Sbjct: 121 REREVSIIDNFVLQGRLDQLAPGEWGIMIGDKAAAKLGVAIGDKLTFVAPEVS-VTPAGM 179

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD--- 233
            P  + F V+GTF     E+DGY  L NI D SRL R+    + G RL  D+  +     
Sbjct: 180 FPRMKRFTVVGTFHVGAGEIDGYLGLTNISDLSRLHRWKPDQVQGLRLKFDDLFQAPRVA 239

Query: 234 -SLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
            S++QQ   +    +DW    G L+QA+RMEK M+GLLL LIVAVAAFNII++L ++V +
Sbjct: 240 WSIAQQLGDQEFYSRDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVND 299

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG---- 348
           K+G++AIL+T G TP QIM++FMVQG   G+IG ++GA +G   A  ++  +  I     
Sbjct: 300 KRGDIAILRTLGATPGQIMLIFMVQGTVIGVIGTLIGAVVGIFAALNVSAAIAGIETLIG 359

Query: 349 ------VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +     LP  I    V ++   A+ ++  +TLYP+WRAA TQPAEALRYE
Sbjct: 360 HKFLNADVYFIDYLPSQILAQDVYMVCGAALVLSFFATLYPAWRAARTQPAEALRYE 416



>gi|46321384|ref|ZP_00221761.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Burkholderia cepacia R1808]
          Length = 417

 Score =  304 bits (779), Expect = 3e-81
 Identities = 145/420 (34%), Positives = 229/420 (54%), Gaps = 24/420 (5%)

Query: 1   MYQPVALFIGLRYMRGRAA---DRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M  P    IG RY R       + F  F++ +S +GI LGV AL+ VLSVMNGF++E+++
Sbjct: 1   MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  NILGLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
            +L ++    + S  GS+ + Q   + A +   V   AP      +L    +V+  ++ G
Sbjct: 61  RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVIGAAPYVDAQALLTRQDAVSGVMLRG 120

Query: 117 IDPAQKDPLTP---YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
           ++P+ +  ++     +   +   L PG++ ++LG+ LA  LGV  GD++ ++ P  +  T
Sbjct: 121 VEPSLEPQVSDIGKDMKAGRLDALVPGQFGIVLGDALAGNLGVTVGDKVTLVAPEGT-IT 179

Query: 174 PMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV 232
           P G +P  + F V+G F +   E D    +++I DA  L R  A   TG RL L +  K 
Sbjct: 180 PAGMMPRLKQFTVVGVFESGHYEYDSTLAMIDIRDAEALFRMSAP--TGVRLRLSDMQKA 237

Query: 233 DSLSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLM 289
             ++ +    L      +DW  +    F AV++EK MM ++L+LI+AVAAFN+++SL + 
Sbjct: 238 PQVAIELSHTLSGSLYIRDWTQQNKTWFSAVQIEKRMMFIILTLIIAVAAFNLVSSLVMT 297

Query: 290 VMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV 349
           V  KQ ++AIL+T G  P  IM +F+VQG + G +G   G ALG L+A  +  L+P+I  
Sbjct: 298 VTNKQADIAILRTLGAQPGSIMKIFVVQGVTIGFVGTASGVALGCLIAWSIPWLIPMIEH 357

Query: 350 LLDGAALPVAIEP----------LQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           L     LP ++              VI I L+A  ++ ++TLYPSWR A  +PAEALRYE
Sbjct: 358 LFGVQFLPPSVYFISELPSELVAGDVIKIGLIAFVLSAVATLYPSWRGAKVKPAEALRYE 417



>gi|37526704|ref|NP_930048.1|   Lipoprotein releasing system transmembrane protein lolC
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36786136|emb|CAE15188.1|   Lipoprotein releasing system transmembrane protein lolC
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 400

 Score =  304 bits (779), Expect = 3e-81
 Identities = 294/400 (73%), Positives = 337/400 (84%), Gaps = 1/400 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+Q V+LFIGLRYMRGRAAD+FGRFVSWLSTIGITLGV AL+TVLSVMNGFER L+ +IL
Sbjct: 1   MFQSVSLFIGLRYMRGRAADKFGRFVSWLSTIGITLGVAALITVLSVMNGFERSLETSIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPE-TAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           GLMPQA+++S +GSL+P+  P      L  V+R+ P+  GDVVLQSAR+V VGVMLGI  
Sbjct: 61  GLMPQAVVTSVNGSLDPKAHPASELAALKQVDRMTPLVMGDVVLQSARNVGVGVMLGIAF 120

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
            + +PLT YL    +  LEPG YN ILGE+LA +LGV RGD+IR+MVP ASQ TPMGRIP
Sbjct: 121 DEYEPLTEYLTGAYRHQLEPGSYNAILGEKLAGELGVKRGDRIRLMVPGASQLTPMGRIP 180

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           SQRLF VIGTFA+NSEVDG ++LVN +DA+RLMRYP G+ITGWRL+L EPL VDSLS Q 
Sbjct: 181 SQRLFTVIGTFASNSEVDGTQILVNQQDAARLMRYPPGHITGWRLYLSEPLAVDSLSLQT 240

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
           +PEG  W+DWR+RKGE FQAVRMEKNMMGLLLSLI+AVAAFNIITSLGL+VMEKQGEVAI
Sbjct: 241 MPEGLLWKDWRERKGEFFQAVRMEKNMMGLLLSLIIAVAAFNIITSLGLLVMEKQGEVAI 300

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
           LQTQGL  RQ+M +FM+QGA AGIIG +LG  LG LL+SQLNNLMP+IG+L  G  LPVA
Sbjct: 301 LQTQGLVRRQVMAIFMIQGAGAGIIGTLLGTGLGVLLSSQLNNLMPLIGLLTSGVELPVA 360

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           IEPLQV  IA+ AMAIALLSTLYPSWRAAA QPAEALRYE
Sbjct: 361 IEPLQVATIAISAMAIALLSTLYPSWRAAAIQPAEALRYE 400



>gi|46312127|ref|ZP_00212726.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Burkholderia cepacia
           R18194]
          Length = 417

 Score =  304 bits (778), Expect = 4e-81
 Identities = 148/420 (35%), Positives = 229/420 (54%), Gaps = 24/420 (5%)

Query: 1   MYQPVALFIGLRYMRGRAA---DRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M  P    IG RY R       + F  F++ +S +GI LGV AL+ VLSVMNGF++E+++
Sbjct: 1   MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  NILGLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
            +L ++    + S  GS+ + Q   + A +   V   AP      +L    +V+  ++ G
Sbjct: 61  RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVIGAAPYVDAQALLTRQDAVSGVMLRG 120

Query: 117 IDPAQKDPLTP---YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
           ++P  +  ++     +   +   L PG++ ++LG+ LA  LGV  GD++ ++ P  S  T
Sbjct: 121 VEPTLEPQVSDIGKDMKAGQLGALVPGQFGIVLGDALAGNLGVTVGDKVTLVAPEGS-IT 179

Query: 174 PMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV 232
           P G +P  + F V+G F +   E D    ++NI DA  L R  A   TG RL L +  K 
Sbjct: 180 PAGMMPRLKQFTVVGVFESGHYEYDSTLAMINIRDAEALFRMSAP--TGVRLRLKDMQKA 237

Query: 233 DSLSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLM 289
             ++ +    L      +DW  +    F AV++EK MM ++L+LI+AVAAFN+++SL + 
Sbjct: 238 PDVAVELSHTLSGSLYIRDWTQQNKTWFSAVQIEKRMMFIILTLIIAVAAFNLVSSLVMT 297

Query: 290 VMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV 349
           V  KQ ++AIL+T G  P  IM +F+VQG + G +G   G ALG L+A  +  L+P+I  
Sbjct: 298 VTNKQADIAILRTLGAQPGSIMKIFVVQGVTIGFVGTASGVALGCLIAWSIPWLIPMIEH 357

Query: 350 LLDGAALPVAIEP----------LQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           L     LP ++              VI I L+A A++ ++TLYPSWR A  +PAEALRYE
Sbjct: 358 LFGVQFLPPSVYFISELPSELVASDVIRIGLIAFALSAIATLYPSWRGAKVKPAEALRYE 417



>gi|23469022|ref|ZP_00124357.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas syringae pv.
           syringae B728a]
          Length = 414

 Score =  303 bits (777), Expect = 6e-81
 Identities = 153/415 (36%), Positives = 244/415 (58%), Gaps = 17/415 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+ +FIG+RY R +    F  F+S  S IG+ LGV+A++ VLSVMNGF+RE+ + IL
Sbjct: 1   MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++P A+++      + + L + A+K   V    P T  + +L    S+    + G+DPA
Sbjct: 61  GMVPHAVIAGSTPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDPA 120

Query: 121 QK---DPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            +     +T ++      DL+PG++ V+LG+  A +  ++ GD++ ++VP  S   P G 
Sbjct: 121 LEHEVSIVTQHITRGNLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSA-PGGI 179

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
            P  +   V+G F   +E+DG   L+NI DA+++ R+    + G RL L +  K   +S 
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239

Query: 238 QK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                L EG +  DW   +G LF A++MEK M+GLLL +IVAVAAFNII +L ++V +K 
Sbjct: 240 AIAAGLGEGYRADDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVNDKG 299

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------ 348
            ++AIL+T G TPRQIM +F+VQG   GI+G ++G  LG + A  +++L+  +       
Sbjct: 300 ADIAILRTIGATPRQIMAIFVVQGTVIGIVGTLIGGILGIIAALNVSSLVGWVERVSGQH 359

Query: 349 ----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                +   + LP  ++   V++I      ++ L+T+YP+WRAA  QPA ALRYE
Sbjct: 360 IFSSDVYFISNLPSELQAGDVLLICSAGFILSFLATIYPAWRAAQIQPAHALRYE 414



>gi|46132427|ref|ZP_00170902.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Ralstonia eutropha JMP134]
          Length = 416

 Score =  303 bits (776), Expect = 6e-81
 Identities = 145/419 (34%), Positives = 226/419 (53%), Gaps = 23/419 (5%)

Query: 1   MYQPVALFIGLRYMRGRAA---DRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M  P    IG RY R       + F  F+S +S +GI LGV AL+ VLSVMNGF++E+++
Sbjct: 1   MKFPYEWQIGWRYTRASKRASRNTFISFISMISMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  NILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGI 117
            +L ++    +       + Q+    A++   V   AP      +L    +V   ++ G+
Sbjct: 61  RMLSVLSHIEVIGPSALPDWQRTAAEAMRNKEVIGAAPYVAAQAMLTREDAVRGVLLRGV 120

Query: 118 DPAQKDPLTP---YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTP 174
           DPA++  ++             L+PG++ + LG +LA+ +GV  GD+I ++ P  +  TP
Sbjct: 121 DPAEEPKVSDIGKQFKAGHMESLQPGEFGIALGNELANAMGVQVGDKITLLAPQGT-ITP 179

Query: 175 MGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD 233
            G +P  + F V+G F++   E D    LVNI DA  L R      TG RL L +  +  
Sbjct: 180 AGVLPRLKQFTVVGVFSSGHFEFDSALALVNIRDAETLFRMTGP--TGVRLKLADMQRAP 237

Query: 234 SLSQQKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMV 290
            ++ +           +DW  +    F AV+ EK MM ++L+LI+AVAAFN++++L + V
Sbjct: 238 QVANELAGTMSGELYLRDWSKQNRNWFAAVQTEKRMMFIILTLIIAVAAFNLVSTLVMTV 297

Query: 291 MEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL 350
            +KQ ++AIL+T G  P  IM +F+VQG + G IG +LG A G L+A+ ++ ++P I  L
Sbjct: 298 TDKQADIAILRTMGAQPGSIMKIFIVQGVAIGFIGTLLGVAGGTLIATNIDVIVPFIERL 357

Query: 351 LDGAALPVAIEPL----------QVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           L    LP  I  +           +  I +++  +A L+TLYPSWRAA   PAEALRYE
Sbjct: 358 LHVQFLPRDIYFISELPSDPRVNDIATIGIISFVLATLATLYPSWRAARVNPAEALRYE 416



>gi|37680547|ref|NP_935156.1|   putative ABC transporter integral membrane subunit [Vibrio
           vulnificus YJ016]
 gi|37199295|dbj|BAC95127.1|   putative ABC transporter integral membrane subunit [Vibrio
           vulnificus YJ016]
          Length = 401

 Score =  303 bits (776), Expect = 8e-81
 Identities = 213/401 (53%), Positives = 295/401 (73%), Gaps = 2/401 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+ PV++FIGLRY+RGR+ DRF RFVS++ST GIT+GVM+LVTVLSVMNGFE +L+  IL
Sbjct: 1   MFHPVSIFIGLRYLRGRSGDRFSRFVSYMSTAGITVGVMSLVTVLSVMNGFEAQLKERIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++PQA++S + G       PE    L    +  P+   + V+QS   ++VG ++GI+P+
Sbjct: 61  GVLPQAVVSMDGGKTPHTTPPEFVRALSPHYKPTPLVRSEAVIQSPSQLSVGYLIGIEPS 120

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
             DP+  +L+  + + LE GKY V LG  LA  L V+ GD++R+MV SASQFTP+GRIPS
Sbjct: 121 ADDPIENHLIAGRLSQLEAGKYQVFLGHSLARSLNVSMGDKVRLMVTSASQFTPLGRIPS 180

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
           QR F V G F   S++DG  M+ +IEDA RL+R P+  I+GWRL+ D+P +V   +   L
Sbjct: 181 QRNFTVAGMFNTGSDIDGQLMVTHIEDAGRLVRLPSKTISGWRLYFDDPFQVTEAANTPL 240

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
           P+G +W DWR ++GELFQAV+MEKNMMGL+L LIVAVAAFNII++L ++VMEKQ EVAIL
Sbjct: 241 PDGWQWSDWRAQRGELFQAVKMEKNMMGLMLGLIVAVAAFNIISALIMVVMEKQSEVAIL 300

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV--LLDGAALPV 358
           +TQG+    IM +FMVQGAS+GIIG++ G A+G LL+  LN ++   GV     G +LPV
Sbjct: 301 KTQGMNSFGIMAIFMVQGASSGIIGSLFGGAVGVLLSQNLNTILETAGVALFTFGGSLPV 360

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            I+P Q++ + ++A+ ++LL+TLYPS+RA++ +PAEALRYE
Sbjct: 361 LIQPFQIVAVVVLAVLLSLLATLYPSYRASSVKPAEALRYE 401



>gi|53719887|ref|YP_108873.1|   putative lipoprotein releasing system transmembrane protein
           [Burkholderia pseudomallei K96243]
 gi|53723791|ref|YP_103316.1|   lipoprotein releasing system transmembrane protein, putative
           [Burkholderia mallei ATCC 23344]
 gi|52427214|gb|AAU47807.1|   lipoprotein releasing system transmembrane protein, putative
           [Burkholderia mallei ATCC 23344]
 gi|52210301|emb|CAH36280.1|   putative lipoprotein releasing system transmembrane protein
           [Burkholderia pseudomallei K96243]
          Length = 417

 Score =  302 bits (773), Expect = 2e-80
 Identities = 148/420 (35%), Positives = 231/420 (55%), Gaps = 24/420 (5%)

Query: 1   MYQPVALFIGLRYMRGRAA---DRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M  P    IG RY R       + F  F++ +S +GI LGV AL+ VLSVMNGF++E+++
Sbjct: 1   MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  NILGLMPQAILSSEHGSLNPQQLPETAVKLD-GVNRVAPITTGDVVLQSARSVAVGVMLG 116
            +L ++    + S  GS+   QL     +L+  V   AP      +L    +V+  ++ G
Sbjct: 61  RMLSVLAHVEIFSPTGSMPDWQLTAKEARLNRSVIGAAPYVDAQALLTRQDAVSGVMLRG 120

Query: 117 IDPAQKDPLTP---YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
           ++P+ +  ++     +     T L PG++ ++LG  LA  LGV  GD++ ++ P  +  T
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGT-IT 179

Query: 174 PMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV 232
           P G +P  + F V+G F +   E D    +++I+DA  L R PA   TG RL L +  K 
Sbjct: 180 PAGMMPRLKQFTVVGIFESGHYEYDSTLAMIDIQDAQALFRLPAP--TGVRLRLTDMQKA 237

Query: 233 DSLSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLM 289
             ++++    L      +DW  +    F AV++EK MM ++L+LI+AVAAFN+++SL + 
Sbjct: 238 PQVARELAHTLSGDLYIRDWTQQNKTWFSAVQIEKRMMFIILTLIIAVAAFNLVSSLVMT 297

Query: 290 VMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV 349
           V  KQ ++AIL+T G  P  IM +F+VQG + G +G   G ALG L+A  +  L+P+I  
Sbjct: 298 VTNKQADIAILRTLGAQPGSIMKIFVVQGVTIGFVGTATGVALGCLIAWSIPWLIPMIEH 357

Query: 350 LLDGAALPVAIEP----------LQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 LP ++              VI I ++A A++ L+TLYPSWR A  +PAEALRYE
Sbjct: 358 AFGVQFLPPSVYFISELPSELVAGDVIKIGVIAFALSALATLYPSWRGAKVRPAEALRYE 417



>gi|59713645|ref|YP_206420.1|   lipoprotein releasing system transmembrane protein LolE [Vibrio
           fischeri ES114]
 gi|59481893|gb|AAW87532.1|   lipoprotein releasing system transmembrane protein LolE [Vibrio
           fischeri ES114]
          Length = 402

 Score =  302 bits (773), Expect = 2e-80
 Identities = 213/402 (52%), Positives = 303/402 (75%), Gaps = 3/402 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+ PV++FIGLRY+RGR+ DRF RF+S++ST GIT+GV++LVTVLSVMNGFE +L++ IL
Sbjct: 1   MFHPVSVFIGLRYLRGRSGDRFSRFISYMSTAGITIGVLSLVTVLSVMNGFEGQLKDRIL 60

Query: 61  GLMPQAILSSEHGSLNP-QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G++PQA++SS    + P     E    L  V +V P+  G+ ++QSAR ++ G+++GI+P
Sbjct: 61  GVLPQAVISSTDNQITPLDDEREYVASLPHVTQVTPVVRGEAIIQSARGLSAGMLVGIEP 120

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
            + DP+   L++     L  G+Y + LG +LA +L V  GD +R+MV +ASQ+TP+GRIP
Sbjct: 121 NEYDPIAYELISGNVRQLAAGEYGIFLGSKLARELSVRYGDTVRIMVTNASQYTPLGRIP 180

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           SQR F V+G F   S+VDG  M+ NI+D +RLM+   GNITGWRL+ ++P +V  L++  
Sbjct: 181 SQRNFKVVGVFNTGSDVDGQLMVANIQDTARLMKLKKGNITGWRLFFEDPFQVTELAKMP 240

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
           L     W DWRD++GELFQAV+MEKNMMGL+L LIVA+AAFNII++L ++VMEKQ EVAI
Sbjct: 241 LEHEMTWSDWRDQRGELFQAVKMEKNMMGLMLGLIVAIAAFNIISALIMVVMEKQAEVAI 300

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLD--GAALP 357
           L+TQG+T  Q++++FMVQGAS+G+IGAI+G  LGAL AS +N ++  +G+ L   G +LP
Sbjct: 301 LKTQGMTSNQVLVIFMVQGASSGVIGAIVGGTLGALFASNINVILSTLGLSLFTVGGSLP 360

Query: 358 VAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +EPLQV V+ ++A+ ++LL+T++PS+RAA  QPAEALRYE
Sbjct: 361 AEVEPLQVCVVIILAILLSLLATVFPSYRAAVVQPAEALRYE 402



>gi|50120753|ref|YP_049920.1|   lipoprotein releasing system transmembrane protein [Erwinia
           carotovora subsp. atroseptica SCRI1043]
 gi|49611279|emb|CAG74726.1|   lipoprotein releasing system transmembrane protein [Erwinia
           carotovora subsp. atroseptica SCRI1043]
          Length = 400

 Score =  301 bits (770), Expect = 3e-80
 Identities = 319/400 (79%), Positives = 358/400 (89%), Gaps = 1/400 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRA+DRFGRFVSWLS IGITLGVMALVTVLSVMNGFEREL+ NIL
Sbjct: 1   MYQPVALFIGLRYMRGRASDRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELEGNIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPET-AVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G+MPQA++S+  GSLNP  +P +    L+GV RVAP+TTGDVVLQSARSVAVGVMLGIDP
Sbjct: 61  GVMPQAVISTPQGSLNPVLIPASSLDSLEGVTRVAPLTTGDVVLQSARSVAVGVMLGIDP 120

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
            +K+PL+ YLVNVKQ  L+PG+Y  ILGE+LA QLGVN GDQ+R+MV SASQ TPMGRIP
Sbjct: 121 DEKEPLSRYLVNVKQQQLQPGQYQAILGEKLAEQLGVNTGDQVRMMVTSASQLTPMGRIP 180

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           SQR+F V GTFAANSEVD Y++LVN +DASRLMRYPA +ITGWRLWL++PL VD+LS Q 
Sbjct: 181 SQRIFTVAGTFAANSEVDSYQLLVNQQDASRLMRYPANHITGWRLWLEKPLSVDTLSTQT 240

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
           LPEG+ W+DWR+RKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGL+VMEKQGEVAI
Sbjct: 241 LPEGTVWKDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLLVMEKQGEVAI 300

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
           LQTQGLT RQ+M VFMVQG SAGI+GA+LGA LGALLASQLN LMP++GVLLDGAALPV 
Sbjct: 301 LQTQGLTQRQVMAVFMVQGGSAGIVGALLGALLGALLASQLNTLMPVLGVLLDGAALPVD 360

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           I+P+QV+ IA+ AM IALLSTLYPSWRAA  QPAEALRYE
Sbjct: 361 IDPMQVVTIAISAMVIALLSTLYPSWRAATVQPAEALRYE 400



>gi|53730437|ref|ZP_00348792.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Dechloromonas aromatica
           RCB]
          Length = 415

 Score =  300 bits (768), Expect = 6e-80
 Identities = 154/417 (36%), Positives = 233/417 (55%), Gaps = 20/417 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P  L IGLRY R +  + F  F+S +S +GI LGV AL+ VLSVMNGF++EL+  IL
Sbjct: 1   MALPYELLIGLRYTRAKRRNHFISFISLISMLGIGLGVAALIVVLSVMNGFQKELRTRIL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G+     ++   G L N Q + E A+K   V   AP      +     +V   ++ GI P
Sbjct: 61  GVASHIQITGISGELPNWQAVAEQAMKHPEVRASAPFVQSQGMFTVDGTVKGTIVRGILP 120

Query: 120 AQKDPLTPYLV---NVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+D +  +     +    DL PG++ V+LG  LA  L V  GD++ ++ P  +  TP G
Sbjct: 121 DQEDRVADFRKTIQSGSLDDLRPGEFGVVLGADLARSLRVFTGDKVTLIAPQGT-VTPAG 179

Query: 177 RIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F V+G F     E D    L+N+EDA +L +     ++G RL +D+  +   +
Sbjct: 180 VVPRLKSFKVVGIFEVGMYEYDSGLALINLEDAQKLYQM-EDRVSGVRLKVDDLFQAPRI 238

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           +++    +   +   DW       F+AV++EKNMM ++LSLIVAVAAFN++++L + V +
Sbjct: 239 ARELVRYIDADAYLNDWTKSHANFFRAVQIEKNMMFIILSLIVAVAAFNLVSTLVMAVTD 298

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV--- 349
           KQ ++AIL+T G  P  IM +F++QGA  G IG  LG   G LLA  ++ ++P I     
Sbjct: 299 KQADIAILRTLGARPLSIMGIFVIQGALVGFIGLGLGIVGGVLLALNIDVVVPFIEKVLG 358

Query: 350 -------LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +   + LP  ++   V  + L+A  +ALL+TLYPSW+A+   PAEALRYE
Sbjct: 359 VHFLSKEVYYISDLPSELQWSDVWGVTLIAFVLALLATLYPSWKASRVNPAEALRYE 415



>gi|50085711|ref|YP_047221.1|   transport protein of outer membrane lipoproteins (ABC superfamily,
           membrane) [Acinetobacter sp. ADP1]
 gi|49531687|emb|CAG69399.1|   transport protein of outer membrane lipoproteins (ABC superfamily,
           membrane) [Acinetobacter sp. ADP1]
 gi|11345437|gb|AAG34708.1|   putative integral membrane protein [Acinetobacter sp. BD413]
          Length = 411

 Score =  300 bits (768), Expect = 6e-80
 Identities = 156/413 (37%), Positives = 245/413 (59%), Gaps = 16/413 (3%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P++L+IGLRY R R ++ F  F++ +S IG+TLGV  L+TVLSVMNGF+REL+N +L
Sbjct: 1   MFKPISLYIGLRYTRARRSNHFISFIALVSMIGLTLGVAVLITVLSVMNGFDRELKNRVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++PQA +SS     N  +L +       V  VAP T    +L +   VA  ++ GIDP 
Sbjct: 61  GMVPQATISSTQILTNWPELAKKVEGHKHVVGVAPFTQLQGMLTAQGQVAGIMVSGIDPQ 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            +  ++    ++V     +L+ G++ ++LG+Q+   LG+   D + +++P A+  +P G 
Sbjct: 121 YEKKVSIIQNHMVAGSIDNLKKGEFGIVLGKQMTDALGLGLNDNVTLVLPEATP-SPAGV 179

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           +P  + F ++G F+  +EVD     + + DAS L+R P G   G RL LD+      ++ 
Sbjct: 180 VPRFKRFKIVGIFSIGAEVDSMMGYIALNDASTLLRLPDG-AQGIRLKLDDIFAAPQVAD 238

Query: 238 QK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                LP      +W    G LF A++MEK M+ LLL LIV VAAFNI++SL ++V +K+
Sbjct: 239 DIVRTLPPNFYASNWTYTHGNLFSAIQMEKAMVSLLLFLIVLVAAFNIVSSLVMVVTDKK 298

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------ 348
            ++AIL+T G +P  I  +FMVQG   G+IG + GA LG + AS ++N++  +       
Sbjct: 299 SDIAILRTLGASPATITKIFMVQGTVIGVIGTVAGAVLGVIFASSVSNIIDWVNTALGLH 358

Query: 349 --VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                    LP  +    V++I  V++ ++ L+T+YP+ RAA  QPAEALRYE
Sbjct: 359 LFDAYFINYLPSYLRWQDVVLIVSVSLLLSFLATIYPALRAAKIQPAEALRYE 411



>gi|48770765|ref|ZP_00275108.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Ralstonia metallidurans
           CH34]
          Length = 416

 Score =  297 bits (761), Expect = 4e-79
 Identities = 142/419 (33%), Positives = 224/419 (53%), Gaps = 23/419 (5%)

Query: 1   MYQPVALFIGLRYMRGRAA---DRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M  P    IG RY R       + F  F+S +S +GI LGV AL+ VLSVMNGF++E+++
Sbjct: 1   MNFPYEWQIGWRYTRASKRASRNTFISFISMISMMGIALGVAALIVVLSVMNGFQKEVRD 60

Query: 58  NILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGI 117
            +L ++    +       + Q+    A++   V   AP      ++     V   ++ G+
Sbjct: 61  RMLSVLSHIEVIGAAPLTDWQKTAAEALRNKEVVGAAPYVAAQAMMTREDVVRGVLLRGV 120

Query: 118 DPAQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTP 174
           DPA++  ++             L PG + + LG +LA+ LGV  GD++ ++VP  +  TP
Sbjct: 121 DPAEEPKVSDIANQFRAGSMNALAPGGFGIALGSELANALGVRVGDKVMLVVPQGT-ITP 179

Query: 175 MGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD 233
            G +P  + F V G F++   E D    L+NI DA  L R      TG RL L +  +  
Sbjct: 180 AGMLPRLKQFTVAGVFSSGHYEFDSALALINIGDAETLFRQSGP--TGVRLKLQDMQRAP 237

Query: 234 SLSQQKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMV 290
            ++Q+           +DW  +    F AV+ EK MM ++L+LI+AVAAFN++++L + V
Sbjct: 238 QVAQELAGTMSGDLYLRDWSKQNRNWFAAVQTEKRMMFIILTLIIAVAAFNLVSTLVMTV 297

Query: 291 MEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL 350
            +KQ ++AIL+T G  PR IM +F+VQG + G IG +LG   G L+A+ ++ ++P I  +
Sbjct: 298 TDKQADIAILRTMGAQPRSIMKIFIVQGVAIGFIGTLLGVLGGTLIATNIDVIVPFIERI 357

Query: 351 LDGAALPVAIEPL----------QVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           L    LP  I  +           +  I +++  +A L+T+YPSWRA+   PAEALRYE
Sbjct: 358 LHVQFLPKDIYFISELPSDPRMNDIATIGIISFVLASLATIYPSWRASRVNPAEALRYE 416



>gi|34104273|gb|AAQ60632.1|   lipoprotein releasing system trasmembrane protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34498419|ref|NP_902634.1|   lipoprotein releasing system trasmembrane protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 412

 Score =  295 bits (757), Expect = 1e-78
 Identities = 156/414 (37%), Positives = 239/414 (57%), Gaps = 19/414 (4%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
            P   FIGLRY+R +  + F  F+S +S +GI LGV AL+ VLSVMNGF++E++  IL +
Sbjct: 1   MPFEAFIGLRYLRAKRRNGFISFISLISIVGIALGVAALIIVLSVMNGFQKEIRGRILSV 60

Query: 63  MPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
                +S   G L+  +       K   V   AP  +   +  +  +V  G++ GIDPA 
Sbjct: 61  ASHLEVSGYDGRLSGWRDAQAMLAKQPHVQAAAPFVSSQGLFVAYGNVRGGLVRGIDPAL 120

Query: 122 KDPL---TPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           ++ +     ++V  K  DL+PG + + LG +LA QLGV  GD++ +M P  +  TP G +
Sbjct: 121 ENKVVDVGRHMVAGKLEDLKPGGFGMALGVELARQLGVGVGDKVTLMTPQGN-ITPAGMV 179

Query: 179 PSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  + F V+G F  +  E D    +VN+ DA  L R     ++G RL LD+P+    L  
Sbjct: 180 PRSKQFTVVGIFKVDMFEFDASLAMVNLRDAQVLERM-GDAVSGVRLRLDDPMLAPQLKA 238

Query: 238 QKLP--EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
           +  P        DW D     F+AV++EK MM ++L+LIVAVAAFN++++L ++V +KQ 
Sbjct: 239 ELRPRLPQLLVTDWTDTNANYFRAVQIEKRMMTIILTLIVAVAAFNLVSTLVMVVTDKQA 298

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------- 348
           ++AIL+T G +P  IM +F++QG+ AG++G + G A G  +A  L+ ++P+I        
Sbjct: 299 DIAILRTLGASPGSIMKIFVIQGSVAGVLGTLAGVASGVAIALNLDVIVPVIERIIGTKI 358

Query: 349 ---VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
               +     LP  ++   V  I ++++ +AL +TLYPSWRAA TQPAEALRYE
Sbjct: 359 LSSDVYMIDYLPSDVQWGDVSTITIISLLLALFATLYPSWRAARTQPAEALRYE 412



>gi|53611014|ref|ZP_00342211.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Azotobacter vinelandii]
          Length = 414

 Score =  295 bits (756), Expect = 1e-78
 Identities = 152/415 (36%), Positives = 247/415 (59%), Gaps = 17/415 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+A++IG RY R +  + +  F+S  S +G+ LGV+A++ VLSVMNGF++E+ + IL
Sbjct: 1   MFRPLAVYIGARYTRAKRRNHYISFISLTSMLGLALGVLAMIVVLSVMNGFQKEMSSRIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++P A +       + + L  TA+    V  VAP+T  D +L    ++    + GIDP 
Sbjct: 61  GMVPHAAIVGAQPLDDWRSLAGTALANPQVRAVAPLTELDGMLSYKGTMQPIQVQGIDPF 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           ++  ++    +L   + TDL PG++  I+GE  A +  +  GD++ ++VP  +  +    
Sbjct: 121 EEPKVSIIADHLQQGRLTDLAPGEFGTIIGEITARRFALQVGDKLTLIVPELNGASGS-V 179

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
            P  +  +V+G F   +E+DG   L+++ DA+ LMR+  G + G RL L +  +   ++ 
Sbjct: 180 TPRMQRLSVVGIFKIGAELDGSLALIHVADAAHLMRWQPGQVQGVRLALKDLYQAPKVAG 239

Query: 238 QKLPEG---SKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
               E     +  DW   +G LF A++MEK M+GLLL LIVAVAAFNI+ +L ++V +K 
Sbjct: 240 GIAGELGAAYRAVDWTQTQGSLFSAMQMEKTMIGLLLLLIVAVAAFNIVATLIMVVADKG 299

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------ 348
            ++AIL+T G TP QIM +FMVQG+  G  G ++GA LG ++A  +++L+  +       
Sbjct: 300 ADIAILRTLGATPGQIMAIFMVQGSVIGAFGILIGAVLGMIVALNVSDLIGWLESVSGRQ 359

Query: 349 ----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                +   + LP  ++ L V ++   A+ ++ L+TLYPSWRAA TQPAEALRYE
Sbjct: 360 ILSSDIYFVSYLPSDLQMLDVALVCTAALVLSFLATLYPSWRAARTQPAEALRYE 414



>gi|47573590|ref|ZP_00243628.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rubrivivax gelatinosus PM1]
          Length = 418

 Score =  295 bits (755), Expect = 2e-78
 Identities = 149/421 (35%), Positives = 236/421 (56%), Gaps = 25/421 (5%)

Query: 1   MYQPVALFIGLRYMRGRA---ADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M+ P  L IG RY R       + F  F+S +S +GI LGV AL+ VLSVMNGF++E+++
Sbjct: 1   MHWPYELTIGWRYTRAGRSGRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60

Query: 58  NILGLMPQAILSSEHGSL--NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            +L ++    +    G+   + +     A     V   AP      ++     +   V+ 
Sbjct: 61  RMLSVIAHVEIFEAGGNALPDWRATAAAARGNPEVLGAAPFIATQALIARGEDMRGAVVR 120

Query: 116 GIDPAQKDPLTP---YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           GIDPA++  +TP      +     L+PG + ++LG +LA  LGV  GD + ++ P+  Q 
Sbjct: 121 GIDPAEEANVTPLAAQSRDGAFAGLKPGAWGIVLGGELARTLGVKVGDPVTLVTPNG-QV 179

Query: 173 TPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK 231
           TP G +P  +   V+GTF A   E D    L++I+DA+RL R      TG +L L +  +
Sbjct: 180 TPAGVVPRLKQMTVVGTFNAGHYEYDSGLALMHIDDAARLFRVDGP--TGVQLRLRDQQQ 237

Query: 232 VDSL---SQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGL 288
              +     ++L      +DW       F AV++EK MM ++L+LIVAVAAFN++++L +
Sbjct: 238 ARRVGFELAEQLGPTVSVRDWTRTNRNWFDAVQLEKRMMFIILTLIVAVAAFNLVSTLVM 297

Query: 289 MVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG 348
            V +KQ ++AIL+T G +PR IM +FMVQGA+AG+IG   G  LG L++  ++ ++P + 
Sbjct: 298 TVTDKQADIAILRTLGASPRSIMGIFMVQGAAAGVIGTCSGLTLGLLVSLNIDVIVPALE 357

Query: 349 VLLDGAALPVAIEP----------LQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRY 398
            L + + LP +I              ++ I LV++ +A ++T+YPSWRA+  QPA+ALRY
Sbjct: 358 RLFNASFLPGSIYLISRMPSDPQSADIVPIGLVSLLLAFVATIYPSWRASRVQPAQALRY 417

Query: 399 E 399
           E
Sbjct: 418 E 418



>gi|22125679|ref|NP_669102.1|   hypothetical protein y1785 [Yersinia pestis KIM]
 gi|21958593|gb|AAM85353.1|   hypothetical protein [Yersinia pestis KIM]
 gi|16121894|ref|NP_405207.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis CO92]
 gi|15979664|emb|CAC90448.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis CO92]
 gi|25321147|pir||AE0198   lipoprotein releasing system, transmembrane protein [imported] -
           Yersinia pestis (strain CO92)
          Length = 400

 Score =  295 bits (755), Expect = 2e-78
 Identities = 314/400 (78%), Positives = 357/400 (89%), Gaps = 1/400 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRA+DRFGRFVSWLSTIGITLGVMAL+TVLSVMNGFER LQ+ IL
Sbjct: 1   MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPE-TAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           GLMPQA++++  GSL+P ++P  T   L GV+ + P+TT DVVLQSAR++A GVMLG+DP
Sbjct: 61  GLMPQALITTPQGSLDPNKIPASTLKSLSGVSDIVPLTTADVVLQSARNLAAGVMLGVDP 120

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
            Q +PL  YLVNV    L PG YN+ILGE+LA QLGV RG+ +R+MVPSASQFTPMGRIP
Sbjct: 121 QQHEPLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMGRIP 180

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           SQR+FN+IGTFAANSEVDGY++LVN +DASRLMRYP GNITGWRL+L +PL VDSLSQQ 
Sbjct: 181 SQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLSQQS 240

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
           LPEG+ W+DWRDRKGELFQAVRMEKNMMGLLLSLI+AVAAFNIITSLGL+VMEKQGEVAI
Sbjct: 241 LPEGTVWKDWRDRKGELFQAVRMEKNMMGLLLSLIIAVAAFNIITSLGLLVMEKQGEVAI 300

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
           LQTQGL+ RQIM+VFMVQGA+AG+IGA+LGA LG LLASQLN L+PI+GVL+DGA LPV 
Sbjct: 301 LQTQGLSRRQIMLVFMVQGATAGVIGALLGAGLGVLLASQLNTLIPILGVLIDGATLPVE 360

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           I+PLQV VIAL+AM IALLSTLYPSWRAAA QPAEALRYE
Sbjct: 361 IDPLQVTVIALLAMVIALLSTLYPSWRAAAAQPAEALRYE 400



>gi|51596764|ref|YP_070955.1|   ABC transporter/lipoprotein releasing system, permease subunit lolC
           [Yersinia pseudotuberculosis IP 32953]
 gi|51590046|emb|CAH21680.1|   ABC transporter/lipoprotein releasing system, permease subunit lolC
           [Yersinia pseudotuberculosis IP 32953]
          Length = 400

 Score =  295 bits (755), Expect = 2e-78
 Identities = 313/400 (78%), Positives = 356/400 (89%), Gaps = 1/400 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRA+DRFGRFVSWLSTIGITLGVMAL+TVLSVMNGFER LQ+ IL
Sbjct: 1   MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPE-TAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           GLMPQA++++  GSL+P ++P  T   L GV+ + P+TT DVVLQSAR++A GVMLG+DP
Sbjct: 61  GLMPQALITTPQGSLDPNKIPASTLKSLSGVSDIVPLTTADVVLQSARNLAAGVMLGVDP 120

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
            Q +PL  YLVNV    L PG YN+ILGE+LA QLGV RG+ +R+MVPSASQFTPMGRIP
Sbjct: 121 QQHEPLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMGRIP 180

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           SQR+FN+IGTFAANSEVDGY++LVN +DASRLMRYP GNITGWRL+L +PL VDSLSQQ 
Sbjct: 181 SQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLSQQS 240

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
           LPEG+ W+DWRDRKGELFQAVRMEKNMMGLLLSLI+AVAAFNIITSLGL+VMEKQGEVAI
Sbjct: 241 LPEGTVWKDWRDRKGELFQAVRMEKNMMGLLLSLIIAVAAFNIITSLGLLVMEKQGEVAI 300

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
           LQTQGL+ RQIM+VFMVQGA+AG+IGA+LG  LG LLASQLN L+PI+GVL+DGA LPV 
Sbjct: 301 LQTQGLSRRQIMLVFMVQGATAGVIGALLGVGLGVLLASQLNTLIPILGVLIDGATLPVE 360

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           I+PLQV VIAL+AM IALLSTLYPSWRAAA QPAEALRYE
Sbjct: 361 IDPLQVTVIALLAMVIALLSTLYPSWRAAAAQPAEALRYE 400



>gi|52853542|ref|ZP_00145774.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Psychrobacter sp. 273-4]
          Length = 411

 Score =  293 bits (751), Expect = 5e-78
 Identities = 155/413 (37%), Positives = 239/413 (57%), Gaps = 16/413 (3%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+ALFIGLRY R   ++ F  F+S +S IG+TLGV  L+TVLSVMNGF+REL+  IL
Sbjct: 1   MFRPLALFIGLRYTRAERSNGFISFISLISMIGLTLGVAVLITVLSVMNGFDRELKTRIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++PQA ++S     + +QL +   +   V  VAP      +L S   VA  ++ G+DP 
Sbjct: 61  GMVPQATVTSTEIIGDWKQLADKIKEDPEVVAVAPFIQLQGMLTSNGQVAGIMVTGVDPE 120

Query: 121 QKD---PLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            +     +  ++V      L+ G++ ++LGE +   LG+  GD++ +++P AS  +P G 
Sbjct: 121 YEKNVSIINEHMVEGNIDTLKNGEFGIVLGEGMVQSLGLQLGDKVTLVLPEASP-SPAGV 179

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK---VDS 234
           IP  + F + G F+ + EVD     + + DA++L+R P G   G R+ L++         
Sbjct: 180 IPRFKRFTLTGIFSISPEVDSLMAFIPMGDAAKLLRLPEG-AQGIRMKLNDIFTAPMAAQ 238

Query: 235 LSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
            +    PE     DW    G LF A++MEK M+GLLL LI+ VAAFNI++SL ++V +K+
Sbjct: 239 KAAAIAPEQLYPSDWTQTHGNLFGAIQMEKAMVGLLLFLIILVAAFNIVSSLVMLVTDKK 298

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL---- 350
            ++AIL+T G +PR I  VFMVQG   G IG I G  LG + A  +++++  I       
Sbjct: 299 ADIAILKTFGASPRLITQVFMVQGVVIGFIGTIAGTILGVIFALTVSDILGFINQSFDLN 358

Query: 351 ----LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                    LP  +  + V++I   +  ++ L+T+YP+ RAA  QPA+ LRYE
Sbjct: 359 LFDAYFVNYLPSQLRLVDVVLITSASFVLSFLATVYPARRAAKIQPAQTLRYE 411



>gi|26988880|ref|NP_744305.1|   lipoprotein releasing system, permease protein [Pseudomonas putida
           KT2440]
 gi|24983688|gb|AAN67769.1|   lipoprotein releasing system, permease protein [Pseudomonas putida
           KT2440]
          Length = 413

 Score =  293 bits (750), Expect = 7e-78
 Identities = 143/412 (34%), Positives = 243/412 (58%), Gaps = 17/412 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+ +FIG RY R +  + F  F+S  S IG++LGV+A++ VLSVMNGF+RE+ + IL
Sbjct: 1   MFRPLPIFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           GL+P A +       +  ++ + A+K   V  VAPIT  + +L    ++    + GIDPA
Sbjct: 61  GLVPHAAILGVQPVDDWHKVADAAMKNPAVMAVAPITEMEGMLSYKGAMQPIQVGGIDPA 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           ++  ++    ++V  +   L+PG++ V++GE  A +  +N GD++ ++VP  S+  P G 
Sbjct: 121 EEGKVSIVGQHIVQGRLQGLQPGEFGVVIGELTARRFRLNTGDKLTLIVPEISKE-PGGI 179

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
            P  +   V+G F   +E+DG +  +++ DA+ + R+  G + G RL L +      +S+
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSQAYIHVADAAEMQRWAPGQVQGVRLKLHDLYAAPQVSK 239

Query: 238 QK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                L +  +  DW   +G LF A++MEK M+GLLL +I+AVAAFNII +L ++V +K 
Sbjct: 240 AIAAGLGDAYRADDWSHTQGSLFSAMKMEKTMIGLLLMMIIAVAAFNIIATLVMVVNDKG 299

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------ 348
            ++AIL+T G TP QIM  FMVQG+  GI+G ++G  LG + A  ++ ++  +       
Sbjct: 300 PDIAILRTLGATPAQIMGTFMVQGSLIGIVGTLIGGVLGVIAAFNVSQIVGWLERVSGQH 359

Query: 349 ----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                +   ++LP  ++   V +I    + ++ L+T+YP++RA+  QPA  L
Sbjct: 360 IFTSDVYFVSSLPSQLQWGDVAIICTAGLVMSFLATIYPAYRASQVQPAIGL 411



>gi|9656415|gb|AAF95032.1|   conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
           str. N16961]
 gi|15641886|ref|NP_231518.1|   hypothetical protein VC1884 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|11279731|pir||B82147   conserved hypothetical protein VC1884 [imported] - Vibrio cholerae
           (strain N16961 serogroup O1)
          Length = 406

 Score =  292 bits (747), Expect = 2e-77
 Identities = 212/402 (52%), Positives = 301/402 (74%), Gaps = 3/402 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+ P++ FIGLRY+RGR+ DRF RFVS++ST GIT+GVM+LVTVLSVMNGFE +L++ IL
Sbjct: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64

Query: 61  GLMPQAILSSEHGSLNPQQLP-ETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G++PQA+++   G       P +    L       P+   D V+QSA  +A G+++GI+P
Sbjct: 65  GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEP 124

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
            Q DP+  +L+  + T L+ G+Y + LG  LA  L V  GD++R+MV  ASQFTP+GR+P
Sbjct: 125 QQNDPIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRLP 184

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           SQR F V G F   S+VDG  M+ ++ DA++L+RY A  I+GWRL+ D+P  V  L++Q 
Sbjct: 185 SQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLAEQP 244

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
           LP+  +W DWR+++GELFQAVRMEKNMMGL+L LIV VAAFNII++L ++VMEKQ EVAI
Sbjct: 245 LPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEKQAEVAI 304

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLD--GAALP 357
           L+TQG+  + ++ +FMVQGAS+G+IGA++G  LG LLA+ LN+LM  +GV L   G +LP
Sbjct: 305 LKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGVALFSVGGSLP 364

Query: 358 VAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           VAI+PLQ++++ ++A+ ++LL+TL+P++RA++ QPAEALRYE
Sbjct: 365 VAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406



>gi|48730015|ref|ZP_00263764.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas fluorescens
           PfO-1]
          Length = 414

 Score =  290 bits (744), Expect = 3e-77
 Identities = 149/414 (35%), Positives = 237/414 (57%), Gaps = 17/414 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+++FIG RY R +  +RF  F+S  S IG+ LGV+A++ VLSVMNGF+RE+ + IL
Sbjct: 1   MFRPLSIFIGTRYTRAKRRNRFVSFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G++P A +       + Q +   A+K   V    P T  + +L     +    + G+DPA
Sbjct: 61  GMVPHATIVGVKPIDDWQPVAAAAMKNPEVTAAVPFTEMEGMLSYKGMMQPIQISGVDPA 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           Q+  ++    ++V  +   L+PG++ V+LGE  A +  +N GD+I ++VP  S   P G 
Sbjct: 121 QEGKVSIVAQHIVQGRLDALKPGEFGVVLGEITARRFRLNVGDKITLIVPEVSTA-PGGI 179

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
            P  +  NV+G F   +E+DG   L+++ DA+ +  +    +   RL + +      +S 
Sbjct: 180 TPRMQRLNVVGVFKVGAELDGSMGLIHVSDAATMQHWEPNQVQSVRLAVKDLYAAPKVSS 239

Query: 238 QK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                L    K  DW   +G LF A++MEK M+GLLL +IVAVAAFNII +L ++V +K 
Sbjct: 240 DIASGLGADFKADDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVNDKG 299

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------ 348
            ++AIL+T G TPRQIM +FMVQG   GI+G I+G  LG + A  ++ ++  +       
Sbjct: 300 ADIAILRTIGATPRQIMAIFMVQGTVIGIVGTIIGGVLGVIAALNVSEMVGWVERVTGQH 359

Query: 349 ----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRY 398
                +   + LP  ++   V++I      ++ L+T+YP+WRAA  +PA ALRY
Sbjct: 360 IFSSDVYFVSNLPSELQGGDVLLICSAGFILSFLATVYPAWRAAKIEPAHALRY 413



>gi|30249056|ref|NP_841126.1|   DUF214 [Nitrosomonas europaea ATCC 19718]
 gi|30138673|emb|CAD84968.1|   DUF214 [Nitrosomonas europaea ATCC 19718]
          Length = 415

 Score =  289 bits (741), Expect = 8e-77
 Identities = 145/414 (35%), Positives = 235/414 (56%), Gaps = 19/414 (4%)

Query: 4   PVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLM 63
                IGLRY R +  + F  F+S +S +G+TLG+ AL+TV+SVMNGF +E++  ILG+ 
Sbjct: 3   SYEFLIGLRYTRAKRRNHFISFISLISLLGMTLGMTALITVMSVMNGFHKEVRARILGVA 62

Query: 64  PQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQK 122
             A +SS  GSL + +Q+ E A++   +   AP      +L     V   ++ GI PA +
Sbjct: 63  SHAQISSYQGSLYDWEQIREAAIQNPQIAAAAPYIDAQGMLSHDNMVRGVMVRGILPADE 122

Query: 123 DPLTPY---LVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
           + +  +   +V      L PG++ +I+G++LA  L    G++I ++ P   Q TP G +P
Sbjct: 123 NRVADFAGKMVEGSLDRLAPGEFGIIIGQELARNLNAFPGNKIVLISPQG-QITPAGILP 181

Query: 180 SQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ- 237
             + F V G F     E D    L+++ DA +L R     ++G RL L +  K   + Q 
Sbjct: 182 RLKQFTVTGIFDVGHFEYDSGLALIHLADAQKLYRMAPNQVSGIRLKLHDMFKAPQVIQD 241

Query: 238 --QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
             + LP    + DW  +    F+A+++EK M+ L+L+LI+AVAAFNI+++L + V +KQ 
Sbjct: 242 LARVLPADLYFTDWTQQHANYFRAIQIEKRMLSLILALIIAVAAFNIVSTLVMAVTDKQS 301

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL----- 350
           ++AIL+T G +   IM +F++QGA  GI+G +LG   G LLA  + +++  I  L     
Sbjct: 302 DIAILRTLGASSGSIMKIFIIQGALIGILGTLLGLLGGVLLAYNVGDVIAFIEHLLSTQF 361

Query: 351 -----LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                   + +P   +   ++ +A+V++ + LL+TLYPS+RA+   PAEALRYE
Sbjct: 362 LSQEVYYISKIPSDPQLADIVTVAVVSLILTLLATLYPSYRASKVNPAEALRYE 415



>gi|59801184|ref|YP_207896.1|   LolC [Neisseria gonorrhoeae FA 1090]
 gi|59718079|gb|AAW89484.1|   putative lipoprotein releasing system transmembrane protein
           [Neisseria gonorrhoeae FA 1090]
          Length = 415

 Score =  289 bits (740), Expect = 1e-76
 Identities = 143/416 (34%), Positives = 227/416 (54%), Gaps = 21/416 (5%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
             +  +IGLRY+R +  + F  F++ +S  GI LGV AL+ VLSVMNGF++E++  +L +
Sbjct: 2   FSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLLNV 61

Query: 63  MPQAILSSEHGS-LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
            P A +     +  + + L   A    G+   AP  +   +L +A  +    + GI P++
Sbjct: 62  APHAEIGYIDNTDTDWRNLLRFAENRKGILAAAPYVSNQALLANAGEIRGVQIRGILPSE 121

Query: 122 KDPL---TPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           +  +      +   K  DL PG++++ILG  LA  LG   GD++ V+ P  +  TP G +
Sbjct: 122 ERKVVEYGDKMPAGKFEDLIPGEFDIILGIGLAEALGAEVGDKVTVITPEGN-VTPAGIV 180

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  + F V+G       EVD    + +I+DA  L R     + G RL L +P    +L+ 
Sbjct: 181 PRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDK-EVAGLRLKLADPQNAPALTA 239

Query: 238 QKLPEGSK----WQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
             +PE  +     +DW       F+AV +EK MM ++L+LI+AVAAFN+++SL + V EK
Sbjct: 240 TLIPEAQRDTVWVRDWTYSNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK 299

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG----- 348
           Q ++AIL+T GL+P  +M +FMVQGA +G  G + G   G L    +  ++         
Sbjct: 300 QADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLAGVVCGVLWGWNVGRVVAFFENLLGV 359

Query: 349 -----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 +     LP  ++   V +IA +++ ++ ++TLYPSWRA+ TQPAEALRYE
Sbjct: 360 HLINSQVYFIDYLPSDVDMGDVALIACISLGLSFVATLYPSWRASKTQPAEALRYE 415



>gi|39935992|ref|NP_948268.1|   possible ABC type permease; lipoprotein releasing factor
           [Rhodopseudomonas palustris CGA009]
 gi|39649846|emb|CAE28368.1|   possible ABC type permease; lipoprotein releasing factor
           [Rhodopseudomonas palustris CGA009]
          Length = 426

 Score =  288 bits (738), Expect = 2e-76
 Identities = 124/415 (29%), Positives = 210/415 (50%), Gaps = 19/415 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           + P    I  RY+R R  + F   ++  S +GI LGV  L+ V++VMNGF +EL + ILG
Sbjct: 14  FAPFEWLISGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73

Query: 62  LMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           L    ++      L + + + +    + G+   AP+  G  +  S  + +   + GI   
Sbjct: 74  LNGHLLVQPLESPLTDWKDVADRLSGVQGIKLAAPVVDGQALASSPFNASGVFVRGIRAD 133

Query: 121 QKDPLTPYLVNVKQTDL--EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
             + L+    ++KQ  L        V +G +LA QL ++ GD I ++ P     TPMG  
Sbjct: 134 DLNRLSSIANHLKQGTLEGFDDSQGVAIGRRLADQLSLHAGDSITLVAPRG-AVTPMGTT 192

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  + + V   F    SE D   + + +++A       A ++T   ++ D P ++D   +
Sbjct: 193 PRIKPYKVAAVFEIGMSEYDSTFVFMPLKEAQAYFNR-ANDVTAIEVYTDNPDRIDVFRK 251

Query: 238 QKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                        DWR R    F A+++E+N+M L+L+LIV VAA NII+ L ++V +K 
Sbjct: 252 AVTEAAGRPVFLVDWRQRNSTFFNALQVERNVMFLILTLIVLVAALNIISGLIMLVKDKG 311

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV----- 349
            ++AIL+T G +   IM VF++ GA+ G++G + G  +G L+   + ++   +       
Sbjct: 312 ADIAILRTMGASQGSIMRVFLITGAAIGVVGTLTGFFVGVLVCMNIESIRQFLSWVTNTE 371

Query: 350 -----LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                L   + LP  I+  +   + ++A+ ++ L+TLYPSWRAA   P +ALRYE
Sbjct: 372 LFSPELYFLSKLPAEIDFAETSAVVIMALTLSFLATLYPSWRAARLDPVDALRYE 426



>gi|7380062|emb|CAB84643.1|   putative integral membrane protein [Neisseria meningitidis Z2491]
 gi|15794315|ref|NP_284137.1|   integral membrane protein [Neisseria meningitidis Z2491]
 gi|11279733|pir||D81909   probable integral membrane protein NMA1403 [imported] - Neisseria
           meningitidis (strain Z2491 serogroup A)
 gi|9977668|sp|P57061|LOLC_NEIMA   Lipoprotein releasing system transmembrane protein lolC
          Length = 415

 Score =  288 bits (738), Expect = 2e-76
 Identities = 141/416 (33%), Positives = 227/416 (54%), Gaps = 21/416 (5%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
             +  +IGLRY+R +  + F  F++ +S  GI LGV AL+ VLSVMNGF++E++  +L +
Sbjct: 2   FSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLLNV 61

Query: 63  MPQAILSSEHGS-LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
            P A +     +  + + L        G+   AP  +   +L +A  +    + GI P++
Sbjct: 62  APHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQIRGILPSE 121

Query: 122 KDPL---TPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           +  +      +   K  DL PG++++ILG  LA  LG   G+++ V+ P  +  TP G +
Sbjct: 122 ERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGN-VTPAGVV 180

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  + F V+G       EVD    + +I+DA  L R     + G RL L +P    +L+ 
Sbjct: 181 PRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDK-EVAGLRLKLADPQNAPALTA 239

Query: 238 QKLPEGSK----WQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           + +PE  +     +DW       F+AV +EK MM ++L+LI+AVAAFN+++SL + V EK
Sbjct: 240 KLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK 299

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG----- 348
           Q ++AIL+T GL+P  +M +FMVQGA +G  G + G   G LL   +  ++         
Sbjct: 300 QADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLAGVVCGVLLGWNVGRVVAFFENLLGV 359

Query: 349 -----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 +     LP  ++   V +IA +++ ++ ++TLYPS RA+ TQPAEALRYE
Sbjct: 360 HLINSQVYFIDYLPSDVDMGDVALIACISLGLSFVATLYPSRRASKTQPAEALRYE 415



>gi|56707553|ref|YP_169449.1|   lipoprotein releasing system, subunit C,putative membrane protein
           [Francisella tularensis subsp. tularensis Schu 4]
 gi|54112849|gb|AAV29058.1|   NT02FT1680 [synthetic construct]
 gi|56604045|emb|CAG45037.1|   lipoprotein releasing system, subunit C,putative membrane protein
           [Francisella tularensis subsp. tularensis SCHU S4]
          Length = 420

 Score =  287 bits (735), Expect = 4e-76
 Identities = 140/422 (33%), Positives = 235/422 (55%), Gaps = 25/422 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++ + LFIGLRY+R +  +RF   +S +S +GI+LGV  L+TV+SVMNGF++++++ IL
Sbjct: 1   MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 60

Query: 61  GLMPQAILSSEHGS-LNPQQLPETAVK-LDGVNRVAPITTGDVVLQSARSVAV---GVML 115
            ++P   +    G   +   L +   K    V  VAPI     +L +    +      + 
Sbjct: 61  MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSGSSTTAFVQIQ 120

Query: 116 GIDPAQKDPLTP---YLVNVKQTDLEPGK-YNVILGEQLASQLGVNRGDQIRVMVPSASQ 171
           GI+P  +  + P   ++V+ K + L+  + YN++LG  LA  LGV  GD++ ++VP  S 
Sbjct: 121 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADNLGVKVGDKVTLIVPKIS- 179

Query: 172 FTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK 231
            TP G IP  + F V G F+ + + D Y  ++NI+DA ++      +++  +L +     
Sbjct: 180 LTPAGMIPRIKQFRVSGIFSVSYQYDAYYAMINIKDAQKVF-ETGNSVSSLQLSVKNIYD 238

Query: 232 VDSLSQQK----LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLG 287
              +  +     +P     +DW D     F A++MEK MM  +L LI+ VA FN+++SL 
Sbjct: 239 APLVKDKLNDGAIPPYYFTRDWTDENKSFFDALKMEKTMMFFILLLIITVAVFNLLSSLV 298

Query: 288 LMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII 347
           ++V +K+ ++AIL+T G++ RQI+ VF+ QG   G+IG ++G  LG LL++    ++  I
Sbjct: 299 MVVTDKRSDIAILRTMGMSSRQIITVFIYQGFIIGLIGTVIGVLLGILLSTYATEIVNFI 358

Query: 348 ----------GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALR 397
                       +     +P  +    VI + LV+M ++ L+TLYP+W A+  QP EALR
Sbjct: 359 QNLTGKQFLSASVYLINYIPSELMWSDVIKVTLVSMFLSFLATLYPAWSASKVQPVEALR 418

Query: 398 YE 399
           YE
Sbjct: 419 YE 420



>gi|7226474|gb|AAF41616.1|   conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|11279734|pir||D81107   conserved hypothetical protein NMB1235 [imported] - Neisseria
           meningitidis (strain MC58 serogroup B)
 gi|9977671|sp|P57062|LOLC_NEIMB   Lipoprotein releasing system transmembrane protein lolC
 gi|15677107|ref|NP_274259.1|   hypothetical protein NMB1235 [Neisseria meningitidis MC58]
          Length = 415

 Score =  285 bits (731), Expect = 1e-75
 Identities = 142/416 (34%), Positives = 226/416 (54%), Gaps = 21/416 (5%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
             +  +IGLRY+R +  + F  F++ +S  GI LGV AL+ VLSVMNGF++E++  +L +
Sbjct: 2   FSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLLNV 61

Query: 63  MPQAILSSEHGS-LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
            P A +     +  + + L        G+   AP  +   +L +A  +    M GI P++
Sbjct: 62  APHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILPSE 121

Query: 122 KDPL---TPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           +  +      +   K  DL PG++++ILG  LA  LG   G+++ V+ P  +  TP G +
Sbjct: 122 ERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGN-VTPAGVV 180

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  + F V+G       EVD    + +I+DA  L R     + G RL L +P    +L+ 
Sbjct: 181 PRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDK-EVAGLRLKLADPQNAPALTA 239

Query: 238 QKLPEGSK----WQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
             +PE  +     +DW       F+AV +EK MM ++L+LI+AVAAFN+++SL + V EK
Sbjct: 240 TLIPEAQRDAVWVRDWTYSNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK 299

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG----- 348
           Q ++AIL+T GL+P  +M +FMVQGA +G  G + G   G LL   +  ++         
Sbjct: 300 QADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLAGVVCGVLLGWNVGRVVAFFENLLGV 359

Query: 349 -----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 +     LP  ++   V +IA +++ ++ ++TLYPS RA+ TQPAEALRYE
Sbjct: 360 HLINSQVYFIDYLPSDVDMGDVALIACISLGLSFVATLYPSRRASKTQPAEALRYE 415



>gi|53756984|gb|AAU91275.1|   lipoprotein ABC transporter, permease protein LolE [Methylococcus
           capsulatus str. Bath]
 gi|53803223|ref|YP_115028.1|   lipoprotein ABC transporter, permease protein LolE [Methylococcus
           capsulatus str. Bath]
          Length = 415

 Score =  285 bits (729), Expect = 2e-75
 Identities = 154/417 (36%), Positives = 239/417 (57%), Gaps = 20/417 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+ L+IGLRY R +   RF  F++  S +GI LGV AL+TVLSVMNGFE EL+  IL
Sbjct: 1   MFKPLVLYIGLRYTRAKRRTRFISFITLTSVLGIALGVTALITVLSVMNGFEAELRERIL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G+   A +S   G+L + + L     +   +   AP   G  +L S R  +  ++ GI P
Sbjct: 61  GMTSHASISGPGGTLGDWRVLEPALSEDKRILGWAPYIEGQAMLSSERRASGAMLRGILP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
             +  ++    ++   K  DL PG++ +ILG +LA+ LGV+ GD++ V+ P  +  TP G
Sbjct: 121 EYEPRVSDVANHMQLGKLGDLAPGQFGIILGAELAAYLGVSSGDKVTVITPQVTA-TPAG 179

Query: 177 RIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F VIGTF     E D    L+ +EDA+RL+    G I+G RL LD+      +
Sbjct: 180 ILPRLKRFTVIGTFQVGMFEYDRNLALIQLEDAARLLHM-EGEISGLRLKLDDLFNAHRI 238

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           ++     LP      DW       F+A++ EK +M ++L LIVAVAAFNI+++L ++V +
Sbjct: 239 ARDLGPKLPGDYYVTDWTQAHTNFFRAIKTEKRVMFMILLLIVAVAAFNIVSTLVMVVTD 298

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG---- 348
           K+ ++AIL+TQG+TP  +M +FMV G   G +G ++G   G LLA  ++ ++  I     
Sbjct: 299 KRADIAILRTQGMTPASVMGIFMVLGTVIGAVGTVIGGLGGVLLALNVSEIVHWIESQLS 358

Query: 349 ------VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +   + LP  +    V  I  +A  ++LL+T+YP+W+A+  +PAE LRYE
Sbjct: 359 MKFLSADVYYISDLPSKLNWTDVFQITGMAFLLSLLATIYPAWQASRVRPAEELRYE 415



>gi|46580780|ref|YP_011588.1|   lipoprotein releasing system, permease protein [Desulfovibrio
           vulgaris subsp. vulgaris str. Hildenborough]
 gi|46450200|gb|AAS96848.1|   lipoprotein releasing system, permease protein [Desulfovibrio
           vulgaris subsp. vulgaris str. Hildenborough]
          Length = 411

 Score =  285 bits (729), Expect = 2e-75
 Identities = 125/412 (30%), Positives = 205/412 (49%), Gaps = 16/412 (3%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
               LF+  RY+  R    F   +S +S IG+ LGV +L+ VL VMNGF  +L++ ILG 
Sbjct: 1   MSFELFVAGRYLFARRKQAFISVISAMSIIGVGLGVASLIVVLGVMNGFTTDLRDKILGA 60

Query: 63  MPQAILSSEHGSLNPQ--QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
               I+ S   +      +L      + GV    P    + +L +   V   V+ GIDP 
Sbjct: 61  NAHVIVMSSKPAAMRDVGELMGRVQDVRGVKGATPFIYSETMLSTPHGVKGLVLRGIDPQ 120

Query: 121 QKDPLTPYLVNVKQTDL------EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTP 174
               +   L  + +  L        G + +I+G++LA++LG+  G ++ ++ P   Q T 
Sbjct: 121 TAPGVLSILSRMTRGGLRDLPAGPDGAHGIIIGQELANRLGITTGSRVNLLSPDG-QKTT 179

Query: 175 MGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD 233
            G  P  R F V G F     E D     V ++ A  ++  P G ++G  + +D+  K D
Sbjct: 180 TGFAPRIRPFRVAGIFTTGMYEYDSSLGFVTLDAARDILGLPEGQVSGIEVVVDDVYKAD 239

Query: 234 SLSQQKLPEG----SKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLM 289
            + +  L          ++W +    LF A+++EK  M ++L+LIV V +F+I+T+L ++
Sbjct: 240 VIGEDVLKASGGYPYYVRNWMEMNANLFAALKLEKTAMFVILALIVLVGSFSIVTTLVML 299

Query: 290 VMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN--NLMPII 347
           VMEK  ++AIL + G T   +  +FM+QG   G IG  LG  LG  ++  L     + + 
Sbjct: 300 VMEKTRDIAILMSMGATRSMVRRIFMLQGTIIGAIGTALGYVLGLSVSWALQRYQFIKLP 359

Query: 348 GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +     LPV ++   +  +   AM +  L+T+YP+ +AAA +P EALRYE
Sbjct: 360 QGVYSIDHLPVLLQWSDLAAVGGAAMLLCFLATIYPARQAAALEPVEALRYE 411



>gi|56478739|ref|YP_160328.1|   hypothetical protein ebA5819 [Azoarcus sp. EbN1]
 gi|56314782|emb|CAI09427.1|   conserved hypothetical protein [Azoarcus sp. EbN1]
          Length = 417

 Score =  284 bits (726), Expect = 4e-75
 Identities = 143/417 (34%), Positives = 223/417 (53%), Gaps = 24/417 (5%)

Query: 5   VALFIGLRYMRGRAA----DRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
             + +GLRY R R      +RF  F+S +S +G  LG+ AL+ VLSVMNGF+ EL+  IL
Sbjct: 3   YEILVGLRYTRSRKRAQGRNRFISFISLVSMLGTALGIAALIVVLSVMNGFQEELRTRIL 62

Query: 61  GLMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G+     +S   G L+  QQ+ + A +   V   AP      +L   ++V   ++ G+ P
Sbjct: 63  GVASHVQVSGFDGELDAWQQVADQAARHPDVVATAPYIQEQGMLSFDQAVRGTLVRGVLP 122

Query: 120 AQKDPLTPY---LVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
             +D +  +   + +     L+PG++ ++LG  LA  L    GD++ ++ P     TP  
Sbjct: 123 GAEDGVADFVRFMRSGSFDALQPGRFGIVLGRDLAFALQAQVGDKVTLIAPQG-LVTPAA 181

Query: 177 RIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F V+G F A   E D    L+++ DA  L R     ++G RL LD+      +
Sbjct: 182 VLPRVKQFEVVGIFEAGMFEYDSGLALIHLRDAQALYRMDE-RVSGVRLKLDDLFAAPRV 240

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           +++    +       DW       F+AV +EK MM ++L LIVAVAAFNI+++L + V E
Sbjct: 241 ARELPGLIEGAVAVSDWTRSHANFFRAVALEKTMMTIILFLIVAVAAFNIVSTLVMAVQE 300

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV--- 349
           K  ++AIL+T G +P  IM +F++QGA  G++G   G A G LLA  L+ ++P +     
Sbjct: 301 KYADIAILRTLGASPASIMAIFVLQGAIIGLVGLAAGVAGGLLLAHNLDVVIPALEQITG 360

Query: 350 -------LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +   + LP  + P  VI I  ++  + L++TLYPSWRA+   PAEALRYE
Sbjct: 361 ATLWNKEIYYISELPSKVLPADVITIVSLSFVLTLVATLYPSWRASRVNPAEALRYE 417



>gi|15602425|ref|NP_245497.1|   hypothetical protein PM0560 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720826|gb|AAK02644.1|   unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 396

 Score =  282 bits (723), Expect = 9e-75
 Identities = 174/400 (43%), Positives = 250/400 (62%), Gaps = 5/400 (1%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M   V LFI LRY R ++ADRFGR V+ L++IGI LGVMAL+ VLSVMNG E+  + ++L
Sbjct: 1   MKFSVPLFIALRYWRAKSADRFGRLVTNLASIGIVLGVMALIIVLSVMNGLEQHQKKHVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             +P AI+      +      E       V +  PI    V+LQ+A  V+ G ++G+  +
Sbjct: 61  ANIPHAIVMPVTQRITLTD--EMIALPPFVQKAVPINQTQVILQTATGVSAGQVIGVQQS 118

Query: 121 QKDPLTPYLVNVKQTD-LEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
             DPL   +++      L PG +N+++G QLA +L ++ GD++R+M+   SQ+TP GR+P
Sbjct: 119 ADDPLLMDMLSPDFEQILPPGAFNLVIGAQLAQKLQLHIGDKVRLMMTENSQYTPFGRVP 178

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
            QRLF V   + +  E   YE+  ++ D  RLMR       G+RL+L +P ++  L Q  
Sbjct: 179 VQRLFTVSDIYYSGDEASSYEVFAHLSDIGRLMRIQPELAQGYRLFLQDPFQITELPQYF 238

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
             +  +  DWR +KGE FQAVRMEKNMMGLL+SLI+ VA  NI+TSL LMV++KQGE+AI
Sbjct: 239 AEQSWQLYDWRQQKGEFFQAVRMEKNMMGLLISLIIVVAVSNIVTSLSLMVVDKQGEIAI 298

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
           LQTQGL  RQ+  +F+ QG   G +G ++GA LG L+   L+ L+           LP A
Sbjct: 299 LQTQGLNKRQVRSIFIYQGCLVGFVGTVIGAILGVLVTLNLDRLVGWFN--SADIYLPTA 356

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            +PLQ ++I   ++ ++L+ST+YP++RAA   PAEALRYE
Sbjct: 357 FDPLQFMIILFFSLLLSLISTIYPAYRAAQIDPAEALRYE 396



>gi|27379987|ref|NP_771516.1|   probable ABC transporter permease protein [Bradyrhizobium japonicum
           USDA 110]
 gi|27353141|dbj|BAC50141.1|   bll4876 [Bradyrhizobium japonicum USDA 110]
          Length = 426

 Score =  282 bits (723), Expect = 9e-75
 Identities = 119/415 (28%), Positives = 213/415 (51%), Gaps = 19/415 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           + P    +  RY+R R  + F   ++  S +GI LGV  L+ V++VMNGF +EL + ILG
Sbjct: 14  FAPFEWMLSARYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73

Query: 62  LMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           L    ++      L + + + +   ++ G+   AP+  G  +  S  + +  ++ GI   
Sbjct: 74  LNGHILVQPLESPLTDWKDVADRISQVQGIRLAAPVVDGQALASSPWNASGVLVRGIRSD 133

Query: 121 QKDPLTPYLVNVKQTDL--EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
             + LT    N+KQ  L        V +G +LA QL ++ GD I ++ P     TPMG  
Sbjct: 134 DLNNLTSIAKNIKQGSLEGFDDGQGVAIGRRLADQLSLHAGDSITLVAPKG-AVTPMGTT 192

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  + + ++  F    SE D   + + + +A       + ++T   ++   P ++ + ++
Sbjct: 193 PRIKPYKIVAVFEIGMSEYDLGFVFMPLAEAQAYFNR-SNDVTSIEVFTTNPDRIVAFNK 251

Query: 238 QKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                        DWR R    F A+++E+N+M L+L++IV VAA NI++ L ++V +K 
Sbjct: 252 AVTEAAARPVFLVDWRQRNSTFFNALQVERNVMFLILTMIVLVAALNIVSGLIMLVKDKG 311

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV----- 349
            ++AIL+T G +   IM +F++ GAS G++G ++G  +G ++   + ++   +       
Sbjct: 312 SDIAILRTMGASQGSIMRIFLITGASIGVVGTLVGFFVGLVICLNIESIRQFLSWLTSTE 371

Query: 350 -----LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                L   + LP  I+  +   + ++A+ ++ L+TLYPSWRAA   P EALRYE
Sbjct: 372 LFSPELYFLSKLPAEIDVGETTAVVIMALTLSFLATLYPSWRAARLDPVEALRYE 426



>gi|39997368|ref|NP_953319.1|   ABC transporter, permease protein [Geobacter sulfurreducens PCA]
 gi|39984259|gb|AAR35646.1|   ABC transporter, permease protein [Geobacter sulfurreducens PCA]
          Length = 423

 Score =  282 bits (723), Expect = 1e-74
 Identities = 131/425 (30%), Positives = 219/425 (51%), Gaps = 30/425 (7%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
            P  LFIGLRY++ +    F   ++++ST G+ LGV+AL+ VL+VM GFE +L+  ILG 
Sbjct: 1   MPYELFIGLRYLKAKRKSTFISIITFISTAGVALGVLALIVVLAVMTGFEEDLKEKILGT 60

Query: 63  MPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
               ++    G + +   + E    + GV  V P     V+L S  +V+  V+ G+DPA 
Sbjct: 61  NAHIVVLKSSGGIEDYHAMMERLSAVKGVKAVTPFIYSQVMLSSGGNVSGVVLRGVDPAT 120

Query: 122 KDPLTPYLVNVKQTDLE-------------PGKYNVILGEQLASQLGVNRGDQIRVMVPS 168
              +T    ++    L              P +  +I+G++LA  L +  GD + V+ P 
Sbjct: 121 DPQVTNLSRSLVDGKLTDLTTVPAPLASAEPVRPGIIIGKELARSLNLYVGDTLNVISPL 180

Query: 169 ASQFTPMGRIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLD 227
            +  TP+G +P  + F V+G F     E D     V + +A   +      +TG +L + 
Sbjct: 181 GN-ITPLGMVPKMKQFRVVGLFNTGMFEYDSTLAYVGLGEAQEFLSM-GKAVTGIQLRVA 238

Query: 228 EPLKVDSLSQQKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIIT 284
           +      + ++   +       +DW      +  A++ EK +M ++L+LIV VAAF I +
Sbjct: 239 DVYHTGEMVREINRDLGFPYYARDWMQMNKNILFALKTEKMVMFIILTLIVLVAAFGIAS 298

Query: 285 SLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM 344
           +L ++VMEK  ++AIL++ G T R IM +F+++G   GI G  +G   G L+A  L  ++
Sbjct: 299 TLFMVVMEKTKDIAILKSMGATGRSIMKIFVLEGLIIGISGTAIGVIGGLLVALNLEPIV 358

Query: 345 PIIG----------VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAE 394
            +I            +      P  + P  V++I++ A+ I+L++TLYPSW+A+   PAE
Sbjct: 359 GVIQRVTGFELFSKDVYYLDHFPSQVVPSDVLLISVTAVIISLVATLYPSWQASRLPPAE 418

Query: 395 ALRYE 399
           ALRYE
Sbjct: 419 ALRYE 423



>gi|46133408|ref|ZP_00203154.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           R2866]
          Length = 416

 Score =  281 bits (720), Expect = 2e-74
 Identities = 109/411 (26%), Positives = 204/411 (49%), Gaps = 21/411 (5%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
             FI  RY RG+  +     ++  S IGI LGV  L+  LS MNGFEREL   IL ++P 
Sbjct: 4   PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63

Query: 66  AILSSEHGSLN-----PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             + S H + +      Q L +   +   +  ++P  +   ++++   + V  + G++  
Sbjct: 64  IEIFSAHQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENGSKLKVVQVKGVEKQ 123

Query: 121 QKDPLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
            +D ++     V  +  +    +  ++LG  +A +L V  GD I +++   +      + 
Sbjct: 124 AEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ- 182

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P++    V      + ++D    L+ +  A   + Y    ITG  L LD+P  V +L   
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242

Query: 239 KL---PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
            L   P+    Q+W  + G +++ +++ + +M + + L++ V+ FNI+++L + V +KQG
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQLIRTVMYIAMVLVIGVSCFNIVSTLIMAVKDKQG 302

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII-------- 347
           ++AI++T G     I  +F+  G  AG+ G ++G  LG +LA  L   +  I        
Sbjct: 303 DIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKL 362

Query: 348 --GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             G +     LP  +    V+++ + A+A++L+++LYP+ RAA  QPA+ L
Sbjct: 363 LSGDVYFVDFLPSELHWSDVLMVLIAALALSLIASLYPASRAAKLQPAQVL 413



>gi|16273448|ref|NP_439697.1|   hypothetical protein HI1548 [Haemophilus influenzae Rd KW20]
 gi|1574393|gb|AAC23198.1|   conserved hypothetical transmembrane protein [Haemophilus
           influenzae Rd KW20]
 gi|1074836|pir||H64035   probable permease HI1548 - Haemophilus influenzae (strain Rd KW20)
 gi|1175890|sp|P44250|LOLE_HAEIN   Lipoprotein releasing system transmembrane protein lolC
          Length = 416

 Score =  280 bits (716), Expect = 7e-74
 Identities = 110/411 (26%), Positives = 203/411 (49%), Gaps = 21/411 (5%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
             FI  RY RG+  +     ++  S IGI LGV  L+  LS MNGFEREL   IL ++P 
Sbjct: 4   PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63

Query: 66  AILSSEHGSLN-----PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           A + S   +        Q L +   +   +  ++P  +   ++++   + V  + G++  
Sbjct: 64  AEILSAPNATEPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENGSKLKVVQVKGVEKQ 123

Query: 121 QKDPLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
            +D ++     V  +  +    +  ++LG  +A +L V  GD I +++   +      + 
Sbjct: 124 AEDKVSSIGNFVQEQGWNKFEKEGGLVLGSGIAKELDVKVGDWITLLISQQNGDEQFAQ- 182

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P++    V      + ++D    L+ +  A   + Y    ITG  L LD+P    +L   
Sbjct: 183 PTREPVQVTSILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSARNLDLS 242

Query: 239 KL---PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
            L   P+    Q+W  + G +++ +++ + +M + + L++ VA FNI+++L + V +KQG
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQLIRTVMYIAMVLVIGVACFNIVSTLIMAVKDKQG 302

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII-------- 347
           ++AI++T G     I  +F+  G  AG+ G ++G  LG +LA  L   +  I        
Sbjct: 303 DIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKL 362

Query: 348 --GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             G +     LP  +  L V+++ + A+A++L+++LYP+ RAA  QPA+ L
Sbjct: 363 LSGDVYFVDFLPSELHWLDVLMVLVAALALSLMASLYPASRAAKLQPAQVL 413



>gi|17983113|gb|AAL52320.1|   LIPOPROTEIN RELEASING SYSTEM TRANSMEMBRANE PROTEIN LOLE [Brucella
           melitensis 16M]
 gi|17987422|ref|NP_540056.1|   LIPOPROTEIN RELEASING SYSTEM TRANSMEMBRANE PROTEIN LOLE [Brucella
           melitensis 16M]
 gi|25321161|pir||AE3394   lipoprotein releasing system transmembrane protein lolE [imported]
           - Brucella melitensis (strain 16M)
          Length = 422

 Score =  279 bits (715), Expect = 8e-74
 Identities = 118/416 (28%), Positives = 203/416 (48%), Gaps = 20/416 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      I  RY+R R  + F   ++  S  GI LGV  L+ V++VMNGF  EL   ILG
Sbjct: 9   FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 68

Query: 62  LMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSA-RSVAVGVMLGIDP 119
           +    I+      L+    L +    + G+    P+  G  ++Q    +    ++ G+  
Sbjct: 69  INGHLIMQPIDRPLDDYADLIKRVNAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 128

Query: 120 AQKDPLTPYLVNVKQTDL--EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
              D L     N++Q  L        V +G ++A  LG++ GD +RV+ P     TP G 
Sbjct: 129 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGD-VTPFGV 187

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
            P  + + ++  F    SE D   +++ + +A        G +    +++D P KVD++ 
Sbjct: 188 NPRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFN-QEGKVQSLEIFVDNPDKVDAMR 246

Query: 237 QQKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
                         DWR R    F A+ +E+N+M ++L+LIV VAA NII+ L ++V +K
Sbjct: 247 APVEEAAARQLSLVDWRQRNQTFFSALEVERNVMFMILTLIVLVAALNIISGLIMLVKDK 306

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV---- 349
             ++AIL+T G T   +M +F++ GA+ G+ G + G  LG ++   +  L          
Sbjct: 307 GHDIAILRTMGATRGAVMRIFLMTGAAIGVTGTVAGVILGVVVCLNVERLREFFSWLSGT 366

Query: 350 ------LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 L   + LP  ++P + + + ++A+ ++ ++T++P+WRAA   P EALRYE
Sbjct: 367 TLFNPELYFLSQLPAKMDPGETLSVIVMALVLSFIATIFPAWRAAKLDPVEALRYE 422



>gi|54298182|ref|YP_124551.1|   hypothetical protein lpp2239 [Legionella pneumophila str. Paris]
 gi|53751967|emb|CAH13391.1|   hypothetical protein [Legionella pneumophila str. Paris]
          Length = 415

 Score =  279 bits (715), Expect = 8e-74
 Identities = 146/416 (35%), Positives = 233/416 (56%), Gaps = 18/416 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MY+P+ALFIGLRY R R  + F  F+S  S +GI +GVM L+TVLSVMNGF++E+     
Sbjct: 1   MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G+ P+  ++     L +  ++ +    + G+  +AP      +L     V   V+ GI P
Sbjct: 61  GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 120

Query: 120 AQKDPLTPYLVNVKQTDLEP-GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
            ++  +T     +   +++    + +ILG+ LA  LGV  GD++ +M+P A+  TP G I
Sbjct: 121 EKEQSVTHLNKKLLAGNMDNLKHFGIILGKGLADSLGVMIGDKVTIMIPQAT-VTPAGMI 179

Query: 179 PSQRLFNVIGTFA--ANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           P  + F V+G F+       D     +NIEDA +LM+    +++G ++ ++   K   LS
Sbjct: 180 PRFKRFTVVGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPELS 239

Query: 237 ---QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
                 L EG +  +W  + G  F+AV+MEK MM ++L LI+AVAAFN+++SL ++V +K
Sbjct: 240 YELSDLLGEGYQVGNWTQQFGAFFEAVKMEKTMMFMILLLIIAVAAFNLVSSLVMVVNDK 299

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------ 347
           Q E+AIL+T G TP  I+ VF+VQG   G++G ILG   G +LA+    ++  +      
Sbjct: 300 QAEIAILRTIGATPSTILWVFIVQGMMVGLVGTILGLLGGLVLANNATEIVNALQSFFQV 359

Query: 348 ----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 +     LP  I    +  +  +A+ ++  +T+YP+WRA+ T  AEAL YE
Sbjct: 360 KVLSSSIYFVDYLPSKIMFRDLWQVCAMALLMSFAATIYPAWRASKTVIAEALHYE 415



>gi|23347634|gb|AAN29752.1|   ABC transporter, permease protein [Brucella suis 1330]
 gi|23501710|ref|NP_697837.1|   ABC transporter, permease protein [Brucella suis 1330]
          Length = 422

 Score =  279 bits (714), Expect = 9e-74
 Identities = 118/416 (28%), Positives = 203/416 (48%), Gaps = 20/416 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      I  RY+R R  + F   ++  S  GI LGV  L+ V++VMNGF  EL   ILG
Sbjct: 9   FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 68

Query: 62  LMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSA-RSVAVGVMLGIDP 119
           +    I+      L+    L +    + G+    P+  G  ++Q    +    ++ G+  
Sbjct: 69  INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 128

Query: 120 AQKDPLTPYLVNVKQTDL--EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
              D L     N++Q  L        V +G ++A  LG++ GD +RV+ P     TP G 
Sbjct: 129 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGD-VTPFGV 187

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
            P  + + ++  F    SE D   +++ + +A        G +    +++D P KVD++ 
Sbjct: 188 NPRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFN-QEGKVQSLEIFVDNPDKVDAMR 246

Query: 237 QQKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
                         DWR R    F A+ +E+N+M ++L+LIV VAA NII+ L ++V +K
Sbjct: 247 APVEEAAARQLSLVDWRQRNQTFFSALEVERNVMFMILTLIVLVAALNIISGLIMLVKDK 306

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV---- 349
             ++AIL+T G T   +M +F++ GA+ G+ G + G  LG ++   +  L          
Sbjct: 307 GHDIAILRTMGATRGAVMRIFLMTGAAIGVTGTVAGVILGVVVCLNVERLREFFSWLSGT 366

Query: 350 ------LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 L   + LP  ++P + + + ++A+ ++ ++T++P+WRAA   P EALRYE
Sbjct: 367 TLFNPELYFLSQLPAKMDPGETLSVIVMALVLSFIATIFPAWRAAKLDPVEALRYE 422



>gi|48845381|ref|ZP_00299663.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Geobacter metallireducens
           GS-15]
          Length = 423

 Score =  279 bits (714), Expect = 1e-73
 Identities = 130/425 (30%), Positives = 218/425 (51%), Gaps = 30/425 (7%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
               LFIGLRY++ +    F   ++++ST G+ LGVMAL+ VL+VM GFE +L+  ILG 
Sbjct: 1   MSYELFIGLRYLKAKRKSTFISIITFISTAGVALGVMALIVVLAVMTGFEEDLKEKILGT 60

Query: 63  MPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
               ++    G++ +   + E   K+ GV    P     V+L +  +V+  V+ GID   
Sbjct: 61  NAHVVVLKSSGTMEDYPAIMERLKKMKGVVAATPFIYSQVMLSTGSNVSGVVLRGIDVKT 120

Query: 122 KDPLTPYLVNVKQTDL-------------EPGKYNVILGEQLASQLGVNRGDQIRVMVPS 168
              +T    ++ +  L             EP K  +I+G +LA  L +  GD + V+ P 
Sbjct: 121 DPLVTNLYRSLVEGKLGDLERSPLPLATPEPPKPGIIIGRELARSLNIYPGDTVNVISPL 180

Query: 169 ASQFTPMGRIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLD 227
            +  TP+G +P  + F V+G F     E D     V + +A   +       TG +L + 
Sbjct: 181 GN-ITPLGMVPKMKQFRVVGLFNTGMFEYDSTLAYVGLSEAQEFLSL-GHAATGIQLRVQ 238

Query: 228 EPLKVDSLSQQKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIIT 284
           +  +   L ++   E       +DW      +  A++ EK +M ++L+LIV VAAF I +
Sbjct: 239 DVYRTGELVRKIDRELGFPFHARDWMQMNKNILFALKTEKMVMFVILTLIVLVAAFGIAS 298

Query: 285 SLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM 344
           +L ++V+EK  ++AIL++ G T R IM +F+++G   GI G ++G   G L+A  L  ++
Sbjct: 299 TLFMVVLEKTKDIAILKSMGATGRSIMKIFVLEGLIIGISGTVIGVIGGLLVAYNLEPIV 358

Query: 345 PIIG----------VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAE 394
            ++            +      P  +    V++I++ A+ I+L++TLYPSW+A+   PAE
Sbjct: 359 GVVQKVTGFELFSKDVYYLDHFPSRVVLSDVVLISVTAVLISLVATLYPSWQASKLPPAE 418

Query: 395 ALRYE 399
           ALRYE
Sbjct: 419 ALRYE 423



>gi|54295131|ref|YP_127546.1|   hypothetical protein lpl2211 [Legionella pneumophila str. Lens]
 gi|53754963|emb|CAH16451.1|   hypothetical protein [Legionella pneumophila str. Lens]
          Length = 415

 Score =  279 bits (714), Expect = 1e-73
 Identities = 146/416 (35%), Positives = 233/416 (56%), Gaps = 18/416 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MY+P+ALFIGLRY R R  + F  F+S  S +GI +GVM L+TVLSVMNGF++E+     
Sbjct: 1   MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G+ P+  ++     L +  ++ +    + G+  +AP      +L     V   V+ GI P
Sbjct: 61  GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 120

Query: 120 AQKDPLTPYLVNVKQTDLEP-GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
            +++ +T     +   +++    + +ILG+ LA  LGV  GD++ +M+P A+  TP G I
Sbjct: 121 EKEESVTHLNKKLLAGNMDNLKHFGIILGKGLADSLGVMIGDKVTIMIPQAT-VTPAGMI 179

Query: 179 PSQRLFNVIGTFA--ANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           P  + F V G F+       D     +NIEDA +LM+    +++G ++ ++   K   LS
Sbjct: 180 PRFKRFTVAGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPELS 239

Query: 237 ---QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
                 L EG +  +W  + G  F+AV+MEK MM ++L LI+AVAAFN+++SL ++V +K
Sbjct: 240 YELSDLLGEGYQVGNWTQQFGAFFEAVKMEKTMMFMILLLIIAVAAFNLVSSLVMVVNDK 299

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------ 347
           Q E+AIL+T G TP  I+ VF+VQG   G++G ILG   G +LA+    ++  +      
Sbjct: 300 QAEIAILRTIGATPSTILWVFIVQGMMVGLVGTILGLLGGLVLANNATEIVNALQSFFQV 359

Query: 348 ----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 +     LP  I    +  +  +A+ ++  +T+YP+WRA+ T  AEAL YE
Sbjct: 360 KVLSSSIYFVDYLPSKIMFRDLWQVCAMALLMSFAATIYPAWRASKTVIAEALHYE 415



>gi|48764624|ref|ZP_00269175.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rhodospirillum rubrum]
          Length = 417

 Score =  279 bits (714), Expect = 1e-73
 Identities = 118/416 (28%), Positives = 204/416 (49%), Gaps = 19/416 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      +  RY+R R  + F   ++  S  GI LGV  L+ V++VMNGF  +L   I G
Sbjct: 3   FNAFERMMAGRYLRARRKEGFVSVIAGFSLAGIGLGVATLIIVMAVMNGFREDLMGRIFG 62

Query: 62  LMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           L     +  ++  + +  +  +    + GV  V P   G V+L        G++ G+ P 
Sbjct: 63  LNGHLTVLGQYDVMMDYDRATDIIRGIPGVRAVTPTVEGQVMLTDNGRSVGGLVRGVRPE 122

Query: 121 QKDPLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
                      V     D   G+ ++++G +LA   G+  GD++ ++ P   + T MG +
Sbjct: 123 DLRQRPMLANAVIAGSLDDLRGQDSIMIGNRLAENFGLRVGDKLTLVSPKG-KVTAMGTV 181

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  R + V   F+   SE D   + + +E A    + P   +    + +D P +V  ++ 
Sbjct: 182 PRVRAYTVRVIFSIGMSEYDSSFVFLPLEAAQTYFQVPTEGVNHLEVVVDHPDRVGEVAG 241

Query: 238 QKLPE----GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
                    G + +DWR      F A+++E+N+M L+L+LI+ VAAFNII+ L ++V +K
Sbjct: 242 TIASTNGLGGIRLRDWRQTNATFFNALQVERNVMFLILTLIIVVAAFNIISGLIMLVKDK 301

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV---- 349
             ++AIL+T G +   IM +F + GA+ G+ G + G  LG L    +  +   +      
Sbjct: 302 GRDIAILRTMGASRGAIMRIFFLAGAAVGVTGTLAGLLLGVLFCQNIEAIRQGLQSLLGV 361

Query: 350 ------LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 +   A +P  ++P +V+ + L+A+ ++  +TLYP+WRAA T P EALR E
Sbjct: 362 ELFNAEIYFLATMPATMDPHEVMNVVLMALGLSFAATLYPAWRAARTDPVEALRNE 417



>gi|52842498|ref|YP_096297.1|   lipoprotein ABC transporter [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629609|gb|AAU28350.1|   lipoprotein ABC transporter [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 451

 Score =  279 bits (713), Expect = 1e-73
 Identities = 146/416 (35%), Positives = 232/416 (55%), Gaps = 18/416 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MY+P+ALFIGLRY R R  + F  F+S  S +GI +GVM L+TVLSVMNGF++E+     
Sbjct: 37  MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 96

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G+ P+  ++     L +  ++ +    + G+  +AP      +L     V   V+ GI P
Sbjct: 97  GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 156

Query: 120 AQKDPLTPYLVNVKQTDLEP-GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
            ++  +T     +   ++     + +ILG+ LA  LGV  GD++ +M+P A+  TP G I
Sbjct: 157 EKEQSVTHLNKKLLAGNMSNLKHFGIILGKGLADSLGVMIGDKVTIMIPQAT-VTPAGMI 215

Query: 179 PSQRLFNVIGTFA--ANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           P  + F V+G F+       D     +NIEDA +LM+    +++G ++ ++   K   LS
Sbjct: 216 PRFKRFTVVGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPELS 275

Query: 237 ---QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
                 L EG +  +W  + G  F+AV+MEK MM ++L LI+AVAAFN+++SL ++V +K
Sbjct: 276 YELSDLLGEGYQVGNWTQQFGAFFEAVKMEKTMMFMILLLIIAVAAFNLVSSLVMVVNDK 335

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------ 347
           Q E+AIL+T G TP  I+ VF+VQG   G++G ILG   G +LA+    ++  +      
Sbjct: 336 QAEIAILRTIGATPSTILWVFIVQGMMVGLVGTILGLLGGLVLANNATEIVNALQSFFQV 395

Query: 348 ----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 +     LP  I    +  +  +A+ ++  +T+YP+WRA+ T  AEAL YE
Sbjct: 396 KVLSSSIYFVDYLPSKIMFRDLWQVCAMALLMSFAATIYPAWRASKTVIAEALHYE 451



>gi|53729138|ref|ZP_00348325.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 416

 Score =  279 bits (713), Expect = 2e-73
 Identities = 113/411 (27%), Positives = 204/411 (49%), Gaps = 21/411 (5%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
             FI  RY RG+  +R    +S  S++GI LGV  L+  LS MNGFEREL   +L ++P 
Sbjct: 4   PFFISWRYQRGKQKNRLVSLISLFSSVGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63

Query: 66  AILSSEHGSLNP-----QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           A L S +G+ N      ++L   A     V   +P  +   ++++   + +  + G+DP 
Sbjct: 64  AELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123

Query: 121 QKDPLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           ++D ++   + +  +Q      +  +ILG  +A  L V  GD++ +++P  ++   + + 
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVAAGDEVTLLLPQPTEDGKLAQ- 182

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P +    V G      ++D    L+ IE A  L+ Y     +G  L L EP KV  L   
Sbjct: 183 PLRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKEPFKVQELQMP 242

Query: 239 KLP---EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
           +L    +      W ++ G ++  +++ + +M + + L++ VA FNII++L + V +KQG
Sbjct: 243 ELANFNQPLYLNTWIEKFGYMYNDIQLVRTVMYIAMVLVIGVACFNIISTLIMAVKDKQG 302

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL----- 350
           ++AI++T G     I  +F+  G  +G+ GA+ G  LG +L+  L  ++  I        
Sbjct: 303 DIAIMRTLGANNGFIKRIFLWYGLLSGMKGALAGIILGVILSLNLTAMIKAIEGFFGIKL 362

Query: 351 -----LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                     LP  +    V  + +  + ++L ++LYP+ RAA  +PA+ L
Sbjct: 363 LSDGVYFVDFLPSELHWQDVAYVLIATIVLSLFASLYPATRAAKLEPAKVL 413



>gi|53732822|ref|ZP_00349581.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           R2846]
          Length = 416

 Score =  278 bits (712), Expect = 2e-73
 Identities = 107/411 (26%), Positives = 202/411 (49%), Gaps = 21/411 (5%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
             FI  RY RG+  +     ++  S IGI LGV  L+  LS MNGFEREL   IL ++P 
Sbjct: 4   PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63

Query: 66  AILSSEHGSLN-----PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             + S   + +      Q L +   +   +  ++P  +   ++++   + V  + G++  
Sbjct: 64  IEIFSAPQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENGSKLKVVQVKGVEKQ 123

Query: 121 QKDPLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
            +D ++     V  +  +    +  ++LG  +A +L V  GD I +++   +      + 
Sbjct: 124 AEDKVSSIGNFVQEQGWNKFGKEGGLVLGSGIAKELDVKVGDWITLLISQQNGDEQFAQ- 182

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P++    +      + ++D    L+ +  A   + Y    ITG  L LD+P  V +L   
Sbjct: 183 PTREPVQITAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242

Query: 239 KL---PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
            L   P+    Q+W  + G +++ +++ + +M + + L++ VA FNI+++L + V +KQG
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQLIRTVMYIAMVLVIGVACFNIVSTLIMAVKDKQG 302

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL----- 350
           ++AI++T G     I  +F+  G  AG+ G ++G  LG +LA  L   +  I  +     
Sbjct: 303 DIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGIVLGIILALNLTTFIQCIEWIIGKKL 362

Query: 351 -----LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                     LP  +  L V+++ + A+A++L+++ YP+ RAA  QPA+ L
Sbjct: 363 LSGDVYFVDFLPSELHWLDVLMVLIAALALSLMASFYPASRAAKLQPAQVL 413



>gi|9656413|gb|AAF95030.1|   conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
           str. N16961]
 gi|15641884|ref|NP_231516.1|   hypothetical protein VC1882 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|11279730|pir||H82146   conserved hypothetical protein VC1882 [imported] - Vibrio cholerae
           (strain N16961 serogroup O1)
          Length = 414

 Score =  278 bits (712), Expect = 2e-73
 Identities = 122/413 (29%), Positives = 219/413 (53%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+  +ALFIG R+ R +  ++   F+S  STIGI +GV  ++  LS MNGFERELQ  +L
Sbjct: 1   MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60

Query: 61  GLMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P        G +     L   A +   +   AP      + +S   +    + G+DP
Sbjct: 61  SVIPHGEFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            ++  ++    ++      D  PG+  VILG+ +A +LGV  GD I +M+PSA+    + 
Sbjct: 121 QREQAVSRLSQFITAQAWQDFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSANSGDKV- 179

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +    V G  A N ++D    L+ +EDA       +G +TG  + + + L+   + 
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSG-VTGISVKVADVLQATQIV 238

Query: 237 QQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           +     L E      W+ + G L++ +++ + +M L++ L++ VA+FNI+++L + V ++
Sbjct: 239 RDVGNQLNEYVYLHSWQQKYGFLYRDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVKDR 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM--------- 344
            GE+AIL+T G T   I  +F+ QG  +G++G+++G+ LG ++A  L  L+         
Sbjct: 299 AGEIAILRTMGATDGLIKRIFVWQGVFSGVLGSVVGSVLGMVVAFNLTPLIKGLEHLIGH 358

Query: 345 -PIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             + G +     LP  +E   V++++  A+ ++LL+T YP+ RA+   PA+ L
Sbjct: 359 QFLSGDIYFVDFLPSQVEWADVVLVSGTAIVLSLLATWYPARRASRLNPAQVL 411



>gi|15892999|ref|NP_360713.1|   hypothetical protein RC1076 [Rickettsia conorii str. Malish 7]
 gi|15620197|gb|AAL03614.1|   unknown [Rickettsia conorii str. Malish 7]
 gi|25321145|pir||D97834   hypothetical protein RC1076 [imported] - Rickettsia conorii
           (strain Malish 7)
          Length = 452

 Score =  278 bits (711), Expect = 3e-73
 Identities = 122/412 (29%), Positives = 206/412 (50%), Gaps = 18/412 (4%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
               I  RY R +  ++F   +S  S +G+ +GV AL+ V+SVMNGF  EL  NI+GL  
Sbjct: 42  FIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGLNG 101

Query: 65  QAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKD 123
             +++ + GS++  +++    +K D V  V  I  G  +     + +  ++ G+      
Sbjct: 102 DIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAYGQALALGKSNNSGVLVKGMKLKDLS 161

Query: 124 PLTPYL--VNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
                   VN    D   GK  + LGEQLAS LGV  GD+IR++ P+ S  T  G +P  
Sbjct: 162 VRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGDKIRLISPNNSVSTTFGSMPRS 221

Query: 182 RLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK- 239
           + F VI  F +   + D   +L+ +  A   +     +I    +   +P K  + S +  
Sbjct: 222 KEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSL-GNDINLIEINSLDPDKALTYSHKIQ 280

Query: 240 --LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
             L       +W+    +   A+ +E+  M  +LSLI+ VAAFNII+SL ++V +K  ++
Sbjct: 281 LLLGPTLYVFNWQTLNSQFLSALAVERTAMFTILSLIITVAAFNIISSLFMLVKDKTSDI 340

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG--------- 348
           AIL+T G + +QIM++F+  G   G++G  LG  LG   +  +  +   +          
Sbjct: 341 AILRTMGASTKQIMLIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLERITGTKIFE 400

Query: 349 -VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +    +LP  +    +I+I  +++ +  L+T+YPS+RA+   P +ALRYE
Sbjct: 401 AAIYFLYSLPSKVRAEDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 452



>gi|56460624|ref|YP_155905.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Idiomarina loihiensis L2TR]
 gi|56179634|gb|AAV82356.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Idiomarina loihiensis L2TR]
          Length = 409

 Score =  277 bits (710), Expect = 3e-73
 Identities = 157/408 (38%), Positives = 245/408 (60%), Gaps = 10/408 (2%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+QPV LFIGLRY R R    F  F++  +  GI LGVMALV V+SVMNGFE +L+  IL
Sbjct: 1   MFQPVVLFIGLRYSRARQGSAFTAFINRFAFAGIALGVMALVVVMSVMNGFEGQLKERIL 60

Query: 61  GLMPQAILSSEHGSL---NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGI 117
           G +PQ  L+    +    N ++  E   +L+ +    P      +LQ +  ++V  + GI
Sbjct: 61  GAVPQVTLTDADSTTELTNWRKTQEQLPELEAIKGSMPYVQTQGILQFSEKMSVANIQGI 120

Query: 118 DPAQKDP---LTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTP 174
            P   +    L   +V      L PG Y++I+G++LA + G+  GD IR++      +TP
Sbjct: 121 YPDAGEVPLSLEDKMVVGDWLSLTPGSYHLIIGQRLAQKQGITVGDNIRIIAAQGGVYTP 180

Query: 175 MGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDS 234
            G +PSQR F V G F+  SEVD   +  +  D +RL+R P G ++G +L+LD+  K   
Sbjct: 181 FGLVPSQRRFVVTGFFSMGSEVDESVVFAHGSDLARLIRLPEGKVSGLQLFLDDAFKAPQ 240

Query: 235 LSQQKL-PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           +++           DWR   G+LF+AV MEK MM L+L+LI+AVAAFN +++L +++ +K
Sbjct: 241 VAESLRNKTQLTTSDWRQNYGQLFEAVGMEKRMMWLMLALIIAVAAFNTLSALIMVINDK 300

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDG 353
           + ++AILQT GL+  +I  VF++QG   G++G+++G  LG +L+  LN+++ + G  +  
Sbjct: 301 RHDIAILQTLGLSNGRIRTVFLLQGLYNGVLGSLIGVILGLILSWYLNDILALFGAQIFA 360

Query: 354 AA---LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRY 398
            +   LP+ I   QVI+  + A+ + L++TLYP+ +AA  QP+EALRY
Sbjct: 361 GSDEGLPIIINVSQVIITVVAAITLTLVATLYPASQAAHVQPSEALRY 408



>gi|48730017|ref|ZP_00263766.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas fluorescens
           PfO-1]
          Length = 386

 Score =  277 bits (709), Expect = 4e-73
 Identities = 139/387 (35%), Positives = 221/387 (57%), Gaps = 19/387 (4%)

Query: 31  TIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGV 90
            IG+ LGV+ ++ VLSVMNGF+ E++  +LG++P A + S     +   L     +   V
Sbjct: 1   MIGLALGVVVMIVVLSVMNGFDHEMRTRVLGMVPHATIESGEAINDWPSLAAKVKQNPQV 60

Query: 91  NRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLT---PYLVNVKQTDLEPGKYNVILG 147
             VAP T    +L +   V+  ++  IDPA +  ++    ++   K  DL PG + +++G
Sbjct: 61  AAVAPFTQMQGLLTNNGQVSKVLLNAIDPALERNVSIIDNFMKQGKLDDLTPGSFGIVIG 120

Query: 148 EQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIE 206
           ++ A++LGV  GD+I  + P  S  TP G  P  + F V+G F     E+DGY  + N++
Sbjct: 121 DKAATKLGVGIGDKITFVAPEVS-VTPAGMFPRMKRFTVVGIFHVGAGELDGYLGVTNLQ 179

Query: 207 DASRLMRYPAGNITGWRLWLDEPLKVDS----LSQQKLPEGSKWQDWRDRKGELFQAVRM 262
           D +++ R+    + G RL  D+  +       ++Q+   +    +DW    G L+QA+RM
Sbjct: 180 DLAKMHRWKPDQVQGLRLKFDDLFQAPREAWNIAQRLGEDRYYARDWTRTHGNLYQAIRM 239

Query: 263 EKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAG 322
           EK M+GLLL LIVAVAAFNII++L ++V +K+G++AIL+T G TP  IM  FMVQG   G
Sbjct: 240 EKAMIGLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTLGATPGTIMRTFMVQGTVIG 299

Query: 323 IIGAILGAALGALLASQLNNLMPIIGV----------LLDGAALPVAIEPLQVIVIALVA 372
           ++G  +GA +G   A  ++  +  +            +     LP  ++   V+++   A
Sbjct: 300 VVGTAIGAVVGIFAALNVSAAISALEGVIGHKFLNADVYFIDYLPSQVQSQDVVMVCAAA 359

Query: 373 MAIALLSTLYPSWRAAATQPAEALRYE 399
           + ++ L+TLYP+WRAA TQPAEALRYE
Sbjct: 360 LVLSFLATLYPAWRAARTQPAEALRYE 386



>gi|24373810|ref|NP_717853.1|   lipoprotein releasing system transmembrane protein LolE [Shewanella
           oneidensis MR-1]
 gi|24348205|gb|AAN55297.1|   lipoprotein releasing system transmembrane protein LolE [Shewanella
           oneidensis MR-1]
          Length = 410

 Score =  277 bits (709), Expect = 4e-73
 Identities = 160/410 (39%), Positives = 238/410 (58%), Gaps = 11/410 (2%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M     L++G RY R R A+ F  F++  +  GI LGV AL+ V SVMNG E +L+  IL
Sbjct: 1   MDLRFPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           G +PQ  + ++    +     E    L GV  V P  +   ++QSA ++    + G+ P 
Sbjct: 61  GAVPQLTVYTKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPE 120

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
             + L+    +  +   ++L  G+Y VILG +LA QL V+ GD +R++      ++P+G 
Sbjct: 121 LAEKLSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGP 180

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           +PSQR F V   F   S+VD     V+ +DA RLMR P+  I   RL+L++P    +L++
Sbjct: 181 VPSQRKFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAK 240

Query: 238 QK------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVM 291
                       +   DWRD  G LF AV+MEKNMM L+LSLIVAVAAFNI+++L +MV+
Sbjct: 241 DVQQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVV 300

Query: 292 EKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLL 351
           +K  +VA+L+TQGL    +M +F+VQG    ++G  LG  +G L+   LN LM  +G+ +
Sbjct: 301 DKTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNLNGLMATLGISI 360

Query: 352 DGA--ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            GA   LPV +   Q+ +I +  + + L++TLYP+ RAA  QPA ALRYE
Sbjct: 361 LGAGQMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATALRYE 410



>gi|54032009|ref|ZP_00364141.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Polaromonas sp. JS666]
          Length = 418

 Score =  276 bits (707), Expect = 6e-73
 Identities = 143/421 (33%), Positives = 233/421 (55%), Gaps = 25/421 (5%)

Query: 1   MYQPVALFIGLRYMRGRA---ADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M  P  L +G RY R       + F  F+S +S +GI LGV AL+ VLSVMNGF++E+++
Sbjct: 1   MQIPYELILGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60

Query: 58  NILGLMPQAILSSEHGSL--NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            +LG++    + + +G+   +PQ+          V   A       +L     +   ++ 
Sbjct: 61  RMLGVISHIEVFAPNGAALPDPQKTLAEIKANPQVVGAATFIAAQALLARGEDMKGTLVR 120

Query: 116 GIDPAQKDPLTPYLVNVKQTDLE---PGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           GIDPA +  +T   V +K T       G + V+LG +LA  +GV  GD + ++ PS  Q 
Sbjct: 121 GIDPALEGQVTDLAVQLKDTAFPKLVSGGFGVVLGGELARSMGVREGDTVTLIAPSG-QV 179

Query: 173 TPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK 231
           TP G +P  +   V+GTF +   E D   ++++ +DA+R+ R      TG R+ L +  +
Sbjct: 180 TPAGVVPRLKQMTVVGTFDSGHFEYDSALVMLHQDDAARIFRLEGP--TGIRIKLKDLHQ 237

Query: 232 VDSLSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGL 288
              ++ +    L      +DW  +    F AV++EK MM ++L+LIVAVAAFN++++L +
Sbjct: 238 AREVALELSRSLTGDLLIRDWTRQNKTWFAAVQLEKRMMFIILTLIVAVAAFNLVSTLVM 297

Query: 289 MVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG 348
            V +K+ ++AIL+T G +P+ IM +FMVQGA  G+IG   G  LG  +A  ++ ++P + 
Sbjct: 298 TVTDKRADIAILRTLGASPQSIMKIFMVQGALVGVIGTFSGLLLGLGIALNIDVIVPALE 357

Query: 349 VLLDGAALPVAIEP----------LQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRY 398
            LL+ + LP  I              ++ I ++++ +A L+T+YPSWRA+   PAEALRY
Sbjct: 358 RLLNASFLPKDIYLISRMPSEPQYADIMPIVVISLVLAFLATIYPSWRASQVNPAEALRY 417

Query: 399 E 399
           E
Sbjct: 418 E 418



>gi|28897753|ref|NP_797358.1|   hypothetical protein VP0979 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28805966|dbj|BAC59242.1|   conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 414

 Score =  276 bits (707), Expect = 7e-73
 Identities = 116/413 (28%), Positives = 210/413 (50%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+  +AL IG R+ R +  ++   F+S  STIGI +GV  ++  LS MNGFERELQ+ +L
Sbjct: 1   MFSSLALMIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P   L   +G L N  +    A++ + V   AP      + +    +    + G+DP
Sbjct: 61  SVIPHGELEGVNGPLQNYTKTMNQALQHEHVVAAAPYVRFTGLAEKGSKLKAIEVRGVDP 120

Query: 120 AQKDPLTPY---LVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
           A +  ++     +      +   G+  VILG  +A++L V  GD + +M+P  +  T   
Sbjct: 121 AYEQAVSSMSDFIDPEAWQNFYSGQQQVILGRGVANELKVQVGDYVTLMIPQ-TGGTNKV 179

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +    V G    N ++D    LV + DA + +R     +TG  L  D+ L   S+ 
Sbjct: 180 QAPKRVRVKVAGFLTLNGQIDHSLALVPLADAQQYVRL-GDGVTGISLKTDDVLDAPSIV 238

Query: 237 QQKLPEG---SKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           ++           + W+ + G L++ +++ + +M L++ L++ VA FNI+++L + V ++
Sbjct: 239 REVGNLVNVYVYLKSWQQQFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDR 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM--------- 344
             E+AIL+T G     I  +F+ QG  +G+ G+++G+ +G L+A  L  ++         
Sbjct: 299 AAEIAILRTMGAKDGLIKRIFVWQGVFSGVFGSLVGSLVGVLVALNLTPIIKGLEGLIGH 358

Query: 345 -PIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             + G +     LP  +    V +++  A+ ++LL+T YP+ RAA   PA  L
Sbjct: 359 QFLSGDIYFVDFLPSQLHWPDVALVSTTAIVLSLLATWYPASRAAKLNPAAVL 411



>gi|15837678|ref|NP_298366.1|   hypothetical protein XF1076 [Xylella fastidiosa 9a5c]
 gi|9106026|gb|AAF83886.1|   conserved hypothetical protein [Xylella fastidiosa 9a5c]
 gi|11279729|pir||A82726   conserved hypothetical protein XF1076 [imported] - Xylella
           fastidiosa (strain 9a5c)
 gi|10720069|sp|Q9PEF2|LOLC_XYLFA   Lipoprotein releasing system transmembrane protein lolC
          Length = 413

 Score =  275 bits (704), Expect = 1e-72
 Identities = 147/417 (35%), Positives = 238/417 (57%), Gaps = 22/417 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+ P+++ IGLRY+R +  + F  F+S  S +GI LGV  L+T L+VM+GF++E+++ +L
Sbjct: 1   MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            +   A +S++   + + Q     A+    V   AP    + +LQ        +M GI P
Sbjct: 61  QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQ-GERHQPAMMRGIVP 119

Query: 120 AQKDPLTPYLVN---VKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+D ++             L+PG+YN++LG++LA  LGV+ GD + V++   +Q TP+G
Sbjct: 120 NQEDKVSVLAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQ-TQTTPVG 178

Query: 177 RIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F V G F     E+D    +VN+ED  ++MR     +TG RL L +      +
Sbjct: 179 TMPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKVMRMDG--VTGVRLKLHDMDHAWDV 236

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           ++     L       DW      L+ +++MEK +MG+LLSLI+A+ AFN+++S  ++V +
Sbjct: 237 ARDLAVRLNGPYLVSDWTRENANLYSSLKMEKTVMGILLSLIIAMGAFNLVSSQVMLVTD 296

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII----- 347
           KQ ++AIL+T GL+P  +M VFMVQG+  GIIG + G   G +L   L  ++ +I     
Sbjct: 297 KQADIAILRTLGLSPAGVMRVFMVQGSLIGIIGTLSGVIGGVVLTWNLERILKLIESTFN 356

Query: 348 -----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +     LP  ++   V+VI L+A+ ++ ++TLYP+WRAA  QPAEALRYE
Sbjct: 357 ITLLPEDVYYITGLPTDMQFPDVVVITLMALVMSFIATLYPAWRAARIQPAEALRYE 413



>gi|53732829|ref|ZP_00349585.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           R2846]
          Length = 393

 Score =  275 bits (704), Expect = 1e-72
 Identities = 183/401 (45%), Positives = 252/401 (62%), Gaps = 10/401 (2%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L+I LRY R ++ADRFGR V+ L+++GI LGVMAL+ VLSVMNG E   +  +L
Sbjct: 1   MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDG-VNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
             +P AI+S E          +T   L   V +  PI T +V+ Q+A+ V+ G ++GI  
Sbjct: 61  SSIPHAIVSEEQPI----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQS 116

Query: 120 AQKDPLTPYLVNVKQTD-LEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
              DPL       K  + L  G++ +++G+QLA +LGVN GD+IR+M+   SQ+TP GR+
Sbjct: 117 FSDDPLVESFDQTKFNEILPRGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFGRV 176

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P QRLF V   +    E  GYE   NI D  RLMR       G+RL+L++P ++  L Q 
Sbjct: 177 PMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITELPQH 236

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              +  K  DWR +KGE FQAVRMEKNMMGLL+SLI+ VA  NI+TSL LMV++KQGE+A
Sbjct: 237 FSTQ--KITDWRVQKGEFFQAVRMEKNMMGLLISLIIVVAISNIVTSLSLMVVDKQGEIA 294

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           ILQTQGLT  Q+  VF+ QG   G +G +LGA LG L    L  ++  +     G  LP 
Sbjct: 295 ILQTQGLTKSQVRSVFIYQGLLVGFVGTLLGAILGVLATLNLTEIVSAVNPQ--GVFLPT 352

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            +  +Q+I +   ++ ++LLSTLYP++RAA  +PA ALRYE
Sbjct: 353 ELSFVQMIFVIGFSLLLSLLSTLYPAYRAAKVEPAAALRYE 393



>gi|46189140|ref|ZP_00205925.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Pseudomonas syringae pv.
           syringae B728a]
          Length = 386

 Score =  275 bits (703), Expect = 2e-72
 Identities = 143/387 (36%), Positives = 219/387 (56%), Gaps = 19/387 (4%)

Query: 31  TIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGV 90
            IG+ LGV+ ++ VLSVMNGF+ E++  +LG++P A + S     + + L     +   V
Sbjct: 1   MIGLALGVVVMIVVLSVMNGFDHEMRTRVLGMVPHATIESADPITDWRGLAAKVQENPQV 60

Query: 91  NRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLT---PYLVNVKQTDLEPGKYNVILG 147
             VAP T    +L     V   ++ GIDP ++  ++    ++   +   L PG + +++G
Sbjct: 61  LAVAPFTQMQGLLTHDGKVQKVLLNGIDPLEERKVSIIDHFIKQGQLDSLSPGSFGIMIG 120

Query: 148 EQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIE 206
           ++ A++LGV  GD++  + P  +  TP G  P  + F V G F     E+DG+  L N++
Sbjct: 121 DKAAAKLGVGIGDKLTFVAPEVT-VTPAGMFPRMKRFEVTGIFHVGAGEIDGFLGLTNLD 179

Query: 207 DASRLMRYPAGNITGWRLWLDEPLKVD----SLSQQKLPEGSKWQDWRDRKGELFQAVRM 262
           D  RL R+    + G RL  D+          ++Q+        +DW    G L+QA+RM
Sbjct: 180 DLGRLHRWKPNQVQGLRLKFDDLFAAPRTSWEIAQKLGENNFYSRDWTRTHGNLYQAIRM 239

Query: 263 EKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAG 322
           EK M+GLLL LIVAVAAFNII++L ++V +K+G++AIL+T G TPRQIM +FMVQG   G
Sbjct: 240 EKAMIGLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTLGATPRQIMAIFMVQGTVIG 299

Query: 323 IIGAILGAALGALLASQLNNLMPIIGVL----------LDGAALPVAIEPLQVIVIALVA 372
           ++G ++GAALG L A  ++  +  +  L               LP  +    V  +   A
Sbjct: 300 VVGTLIGAALGILAALNVSAAIAALEGLIGHKFLNADVYFIDYLPSQLMAQDVFQVCGAA 359

Query: 373 MAIALLSTLYPSWRAAATQPAEALRYE 399
           + ++ L+TLYP+WRAA TQPAEALRYE
Sbjct: 360 LVLSFLATLYPAWRAARTQPAEALRYE 386



>gi|16273455|ref|NP_439704.1|   hypothetical protein HI1555 [Haemophilus influenzae Rd KW20]
 gi|1574399|gb|AAC23204.1|   conserved hypothetical transmembrane protein [Haemophilus
           influenzae Rd KW20]
 gi|1074838|pir||A64036   hypothetical protein HI1555 - Haemophilus influenzae (strain Rd
           KW20)
 gi|1175892|sp|P44252|LOLC_HAEIN   Lipoprotein releasing system transmembrane protein lolC
          Length = 393

 Score =  275 bits (703), Expect = 2e-72
 Identities = 183/401 (45%), Positives = 253/401 (63%), Gaps = 10/401 (2%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L+I LRY R ++ADRFGR V+ L+++GI LGVMAL+ VLSVMNG E   +  +L
Sbjct: 1   MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDG-VNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
             +P AI+S E          +T   L   V +  PI T +V+ Q+A+ V+ G ++GI  
Sbjct: 61  SSIPHAIVSEEQPI----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQS 116

Query: 120 AQKDPLTPYLVNVKQTD-LEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
              DPL       K  + L  G++ +++G+QLA +LGVN GD+IR+M+   SQ+TP GR+
Sbjct: 117 FSDDPLVESFDQTKFNEILPRGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFGRV 176

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P QRLF V   +    E  GYE   NI D  RLMR       G+RL+L++P ++  L Q 
Sbjct: 177 PMQRLFTVSDIYYGYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITELPQH 236

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              +  K  DWR +KGE FQAVRMEKNMMGLL+SLI+ VA  NI+TSL LMV++KQGE+A
Sbjct: 237 FPTQ--KITDWRVQKGEFFQAVRMEKNMMGLLISLIIVVAISNIVTSLSLMVVDKQGEIA 294

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           ILQTQGLT  Q+  VF+ QG   G +G +LGA LG L    L +++  +     G  LP 
Sbjct: 295 ILQTQGLTKSQVRSVFIYQGLLVGFVGTLLGAILGVLATLNLTDIVSAVNPQ--GVFLPT 352

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            +  +Q+I +   ++ ++LLSTLYP++RAA  +PA ALRYE
Sbjct: 353 ELSFVQMIFVIGFSLLLSLLSTLYPAYRAAKVEPAAALRYE 393



>gi|13471386|ref|NP_102952.1|   hypothetical protein mll1342 [Mesorhizobium loti MAFF303099]
 gi|14022128|dbj|BAB48738.1|   mll1342 [Mesorhizobium loti MAFF303099]
          Length = 428

 Score =  274 bits (702), Expect = 3e-72
 Identities = 116/417 (27%), Positives = 201/417 (48%), Gaps = 23/417 (5%)

Query: 4   PVALF---IGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           P + F   +  RY+R R  +     ++ +S +GI LGV  L+ V++VMNGF  EL   IL
Sbjct: 14  PFSFFERTVAWRYLRSRRKETVISVIASISFLGIMLGVATLIVVMAVMNGFRAELLTRIL 73

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSA-RSVAVGVMLGID 118
           G+    I+      L +  Q+      + GV    P+  G V+ Q         ++ GI 
Sbjct: 74  GVNGHLIVQPLDSPLEDYAQVAGRINGVPGVKYAIPLIDGQVLAQGNVGGGTGALVRGIR 133

Query: 119 PAQKDPLTPYLVNVKQTDLEPGKY--NVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
                 +     N+KQ  L        V +G+++A  LG+  GD I ++ P     TP+G
Sbjct: 134 GEDLGKIAIVANNIKQGSLASFDSGEGVAIGKRMAQNLGLTLGDTITLISPDGD-VTPIG 192

Query: 177 RIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
             P  + + +   F    SE D   + +   +A               +++D P  VD+L
Sbjct: 193 TTPRMKGYKIAAIFEVGMSEYDTSIVYMPFSEAQLYFNMDG-RAQTIEIYVDNPDNVDAL 251

Query: 236 SQQKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
             +            DWR R    F A+++E+N+M ++L+LIV VAA NII+ L ++V +
Sbjct: 252 KPKVEEAAQRPIDMVDWRQRNETFFSALQVERNVMFMILTLIVLVAALNIISGLIMLVKD 311

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL-- 350
           K  ++AIL+T G +   I+ +F++ GA+ G+ G + G  LG ++ + + ++      +  
Sbjct: 312 KGHDIAILRTMGASRGAILRIFLMTGAAIGVTGTLAGVLLGVVICTNIESIRQFFSWMTG 371

Query: 351 --------LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                      + LP  ++P +   + ++A+ ++ L+T++P+WRAA   P EALRYE
Sbjct: 372 KVLFNPELYFLSQLPAKMDPRETTYVIIMALGLSFLATVFPAWRAARLDPVEALRYE 428



>gi|42631611|ref|ZP_00157149.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           R2866]
          Length = 393

 Score =  274 bits (702), Expect = 3e-72
 Identities = 183/401 (45%), Positives = 252/401 (62%), Gaps = 10/401 (2%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L+I LRY R ++ADRFGR V+ L+++GI LGVMAL+ VLSVMNG E   +  +L
Sbjct: 1   MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDG-VNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
             +P AI+S E          +T   L   V +  PI T +V+ Q+A+ V+ G ++GI  
Sbjct: 61  SSIPHAIVSEEQPI----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQS 116

Query: 120 AQKDPLTPYLVNVKQTD-LEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
              DPL       K  + L  G++ +++G+QLA +LGVN GD+IR+M+   SQ+TP GR+
Sbjct: 117 FSDDPLVESFDQTKFNEILPRGEFKLVIGDQLAQKLGVNIGDKIRLMITDNSQYTPFGRV 176

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P QRLF V   +    E  GYE   NI D  RLMR       G+RL+L++P ++  L Q 
Sbjct: 177 PMQRLFTVSDIYYGYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITELPQH 236

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              +  K  DWR +KGE FQAVRMEKNMMGLL+SLI+ VA  NI+TSL LMV++KQGE+A
Sbjct: 237 FSTQ--KITDWRVQKGEFFQAVRMEKNMMGLLISLIIVVAISNIVTSLSLMVVDKQGEIA 294

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           ILQTQGLT  Q+  VF+ QG   G +G +LGA LG L    L  ++  +     G  LP 
Sbjct: 295 ILQTQGLTKSQVRSVFIYQGLLVGFVGTLLGAILGVLATLNLTEIVSAVN--PQGVFLPT 352

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            +  +Q+I +   ++ ++LLSTLYP++RAA  +PA ALRYE
Sbjct: 353 ELSFVQMIFVIGFSLLLSLLSTLYPAYRAAKVEPAAALRYE 393



>gi|48832907|ref|ZP_00289933.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Magnetococcus sp. MC-1]
          Length = 413

 Score =  274 bits (701), Expect = 3e-72
 Identities = 140/415 (33%), Positives = 218/415 (52%), Gaps = 18/415 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+      +GLRY+R + + RF   ++ LS  GI LGV AL+ VL+VM GF+ ELQ  IL
Sbjct: 1   MFSSFEWRVGLRYLRAKRSQRFISAITALSVAGIALGVAALIVVLAVMTGFQGELQRQIL 60

Query: 61  GLMPQAILSSEHGSLNP-QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G++   ++ S  GS+   + +         V   AP    + ++ +        + G+DP
Sbjct: 61  GVVSHVVVQSYGGSMEDVEGVLRKVQSRPNVTGAAPFVLANALIYNGGQAYGIALRGVDP 120

Query: 120 AQKDPLTPYLVNVKQTDLEP-GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
            ++  ++   VN+ + D+     + V+LGE LA  LGV   D+I +MVP  +  TP G +
Sbjct: 121 EREKGVSNLHVNMVRGDVAAMAGFGVVLGESLARNLGVGLNDRITLMVPKGN-VTPAGTV 179

Query: 179 PSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  + F V G F +   E D     ++I DA +L+R    ++TG  +    P     + Q
Sbjct: 180 PRVKRFRVAGIFDSGMHEYDTNLAYIHINDAQKLLRL-GESVTGIEVKTPHPDLAMGVRQ 238

Query: 238 QKLPEG---SKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
               +       +DW       F A+++EK  M ++LSL+V VAAFNII+SL ++VMEK 
Sbjct: 239 DLEKQLSGHFWIRDWMQMNRNFFNAIKLEKATMFVILSLVVLVAAFNIISSLIMVVMEKG 298

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------- 347
            ++AIL+T G     IM +F++ G   G+ G + G ALG +LA  L   +  I       
Sbjct: 299 KDIAILKTMGARSHSIMAIFLINGGIIGVGGTLAGLALGLVLAENLERTIGWIERTFGLQ 358

Query: 348 ---GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              G +     LP  + P  +  I +++++I+LLSTLYP+WRA+   P EALRYE
Sbjct: 359 ILHGDVYFIDKLPAQVLPSDLFWITVISLSISLLSTLYPAWRASRVDPVEALRYE 413



>gi|23012408|ref|ZP_00052501.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 414

 Score =  273 bits (699), Expect = 5e-72
 Identities = 127/414 (30%), Positives = 204/414 (49%), Gaps = 18/414 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      +  RY+R R  + F   ++  S  GI LGV  L+ V++VMNGF  EL   ILG
Sbjct: 3   FNSFERMVAFRYLRARRKEGFISVIAGFSLAGIGLGVATLIVVMAVMNGFRHELLGRILG 62

Query: 62  LMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           +     +      L+    L E+  KL GV +V P   G V   SA      ++ G+   
Sbjct: 63  INGHIGVYGSGAPLSGYDPLAESIRKLPGVTKVIPTAEGQVFATSAGGGTGAIVRGVRAE 122

Query: 121 QKDPLTPYLVNVKQT-DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
                  +    +       G   V++G++LA +LGV  GD + ++ P  +  T  G +P
Sbjct: 123 DLLTRPVFQKKYRGNPADFAGDDAVVIGKRLAEKLGVRIGDSVSLISPKGN-VTAFGTVP 181

Query: 180 SQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
             R + V+GTF     E D   + + +E A    R P   +T   ++L+ P  V    + 
Sbjct: 182 RMRGYRVVGTFDVGMFEYDSGFVFMPLEAAQTYFRLPQ-LVTQIEVFLENPDMVPETRKA 240

Query: 239 K---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
                   +   DW+      F A+++E+N+M L+L+LI+ VAAFNII+SL ++V +K  
Sbjct: 241 IWDLTGSSATIYDWQQANANFFNAIQVERNVMFLILTLIILVAAFNIISSLIMLVKDKGR 300

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV------ 349
           ++AIL+T G T   I+ +F + GAS G++G + G  LG   A+ + N+   I        
Sbjct: 301 DIAILRTMGATRGMILRIFFLAGASVGVVGTVAGTLLGVAFATNIENIRQFIQSIIGREL 360

Query: 350 ----LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
               +     LP  +E  +V+ + L+A+ ++  +T+YP+WRAA   P EALRYE
Sbjct: 361 FAAEIYFLTQLPARVETREVVTVVLMALGLSFAATIYPAWRAAKLDPVEALRYE 414



>gi|22996851|ref|ZP_00041094.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Xylella fastidiosa Ann-1]
          Length = 413

 Score =  272 bits (697), Expect = 1e-71
 Identities = 147/417 (35%), Positives = 237/417 (56%), Gaps = 22/417 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+ P+++ IGLRY+R +  + F  F+S  S +GI LGV  L+T L+VM+GF++E+++ +L
Sbjct: 1   MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            +   A +S++   + + Q     A+    V   AP    + +LQ        +M GI P
Sbjct: 61  QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQ-GERHQPAMMRGIVP 119

Query: 120 AQKDPLTPYLVN---VKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  ++             L+PG+YN++LG++LA  LGV+ GD + V++   +Q TP+G
Sbjct: 120 NQETKVSVLAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQ-TQTTPVG 178

Query: 177 RIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F V G F     E+D    +VN+ED  ++MR     +TG RL L +      +
Sbjct: 179 TMPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKIMRMDG--VTGVRLKLHDMDHAWDV 236

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           +      L       DW      L+ +++MEK +MG+LLSLI+A+ AFN+++S  ++V +
Sbjct: 237 ASDLAVRLNGPYLVSDWTRENANLYSSLKMEKTVMGILLSLIIAMGAFNLVSSQVMLVTD 296

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII----- 347
           KQ ++AIL+T GL+P  +M VFMVQG+  GIIG + G   G +L   L  ++ +I     
Sbjct: 297 KQADIAILRTLGLSPAGVMRVFMVQGSLIGIIGTLSGVIGGVVLTWNLERILKLIESTFN 356

Query: 348 -----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +     LP  ++   V+VI L+A+A++ ++TLYP+WRAA  QPAEALRYE
Sbjct: 357 ITLLPEDVYYITGLPTDMQFPDVVVITLMALAMSFIATLYPAWRAARIQPAEALRYE 413



>gi|28198273|ref|NP_778587.1|   lipoprotein releasing system transmembrane protein [Xylella
           fastidiosa Temecula1]
 gi|28056343|gb|AAO28236.1|   lipoprotein releasing system transmembrane protein [Xylella
           fastidiosa Temecula1]
 gi|32129712|sp|Q87EF5|LOLC_XYLFT   Lipoprotein releasing system transmembrane protein lolC
          Length = 413

 Score =  272 bits (696), Expect = 1e-71
 Identities = 147/417 (35%), Positives = 237/417 (56%), Gaps = 22/417 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+ P+++ IGLRY+R +  + F  F+S  S +GI LGV  L+T L+VM+GF++E+++ +L
Sbjct: 1   MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            +   A +S++   + + Q     A+    V   AP    + +LQ        +M GI P
Sbjct: 61  QMSAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQ-GERHQPAMMRGIVP 119

Query: 120 AQKDPLTPYLVN---VKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  ++             L+PG+YN++LG++LA  LGV+ GD + V++   +Q TP+G
Sbjct: 120 NQETKVSVLAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQ-TQTTPVG 178

Query: 177 RIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F V G F     E+D    +VN+ED  ++MR     +TG RL L +      +
Sbjct: 179 TMPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKIMRMDG--VTGVRLKLHDMDHAWDV 236

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           +      L       DW      L+ +++MEK +MG+LLSLI+A+ AFN+++S  ++V +
Sbjct: 237 ASDLAVRLNGPYLVSDWTRENANLYSSLKMEKTVMGILLSLIIAMGAFNLVSSQVMLVTD 296

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII----- 347
           KQ ++AIL+T GL+P  +M VFMVQG+  GIIG + G   G +L   L  ++ +I     
Sbjct: 297 KQADIAILRTLGLSPAGVMRVFMVQGSLIGIIGTLSGVIGGVVLTWNLERILKLIESTFN 356

Query: 348 -----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +     LP  ++   V+VI L+A+A++ ++TLYP+WRAA  QPAEALRYE
Sbjct: 357 ITLLPEDVYYITGLPTDMQFPDVVVITLMALAMSFIATLYPAWRAARIQPAEALRYE 413



>gi|58038567|ref|YP_190531.1|   Lipoprotein releasing system transmembrane protein [Gluconobacter
           oxydans 621H]
 gi|58000981|gb|AAW59875.1|   Lipoprotein releasing system transmembrane protein [Gluconobacter
           oxydans 621H]
          Length = 416

 Score =  272 bits (696), Expect = 1e-71
 Identities = 122/417 (29%), Positives = 205/417 (49%), Gaps = 19/417 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+      +  RY+R R  +RF   ++  S IGI LGV  L+ V+SVMNGF+ +L   IL
Sbjct: 1   MFGRFERMVAGRYLRARRGERFASIIAIFSLIGIALGVATLIIVMSVMNGFKADLMGRIL 60

Query: 61  GLMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           GL     +      +   +       ++ GV  V P+  G V++++ R  +   M G+  
Sbjct: 61  GLHGDLTVYGYGRPIEAYENDVAAIRQVPGVKSVIPMAQGTVLVEAGRFSSGAEMQGVSQ 120

Query: 120 AQKDPLTPYLVNVKQTDLEP--GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
                 T     +    L    G   V +G  +A + G+  G  I ++ P   Q TP G 
Sbjct: 121 QSLRDWTALSSGIIAGSLNDFTGDNAVAIGTTMADRAGLTIGSPITLLSPDG-QATPFGT 179

Query: 178 IPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV---- 232
           +P  + ++V   F AN  + +   +L+ +  A + +      ++  ++   +P  V    
Sbjct: 180 MPRVKTYHVAVIFDANWNDYNSSIVLMPLPAAQKFLMLGPSAVSLIQVSTADPSNVQPTR 239

Query: 233 DSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
            +++ +      +  DW         AV +E+N+M L+L+LI+ VAAFN+I+SL +MV +
Sbjct: 240 KAIAARLEDPRLRVLDWTQSANGFLDAVTVEQNVMFLILTLIILVAAFNVISSLIMMVKD 299

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL-- 350
           K  ++A+L+T G +   IM +F++ GAS GI+G + G+ALG   A  +  +   +  L  
Sbjct: 300 KTRDIAVLRTLGASRGAIMRIFLMCGASVGIVGTVAGSALGIAFALNIERIRQWLQSLTG 359

Query: 351 --------LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                        LP  +   QV  +  +++ ++LL+TLYPSWRAA T P EALR+E
Sbjct: 360 TNLFNPEVYFLERLPAKLVWSQVWEVIGMSLVLSLLATLYPSWRAARTDPIEALRHE 416



>gi|46312832|ref|ZP_00213425.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Burkholderia cepacia
           R18194]
          Length = 417

 Score =  272 bits (695), Expect = 2e-71
 Identities = 143/420 (34%), Positives = 218/420 (51%), Gaps = 24/420 (5%)

Query: 1   MYQPVALFIGLRYMRGRAAD---RFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQN 57
           M  P    IGLRY RG        F  F++  +  GI LGV AL+ VLSVMNGF  E+++
Sbjct: 1   MKLPFEWQIGLRYARGGRRSAGDGFVSFIAGAAMAGIALGVAALIVVLSVMNGFRTEVRD 60

Query: 58  NILGLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
            +L ++    + S  G++ + +     +++   V  VAP      +L +A SV    + G
Sbjct: 61  RMLSVLAHVEIFSPTGAMPDWRLTAHESLQNPAVRAVAPYVDAQALLTNAGSVTGVALRG 120

Query: 117 IDPAQKDPLTPYLVN---VKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
           IDP  +  ++         +   L PG+  ++LG  LA  L V  GD+I    P  ++  
Sbjct: 121 IDPVLEPRVSEIARKLKTGRLDALVPGEMGIVLGSALADALHVKIGDRITFFAP-GNRAR 179

Query: 174 PMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV 232
               +P  R FNV+GTF +   + D     +++ DA  L    A   TG RL LD+  + 
Sbjct: 180 IGDALPQFRQFNVVGTFESGHYQYDSALAYIHLRDAQTLFNVRAP--TGIRLRLDDLQRA 237

Query: 233 DSLSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLM 289
             ++ +    L      +DW  +    F+A R++K M+ L+L LIVAVAAFN+++SL + 
Sbjct: 238 PDVALELSRTLSGDLYIRDWTRQNRTWFEAERLQKRMLSLILMLIVAVAAFNLVSSLVMT 297

Query: 290 VMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV 349
           V +KQG++AIL+T G  P  IM +F +QG + G+ G + G ALG  +A  +  ++P I  
Sbjct: 298 VTQKQGDIAILRTLGAPPGSIMKIFAIQGMTIGLAGTLAGVALGCAIAVSIPWVLPAIEQ 357

Query: 350 L----------LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           L             ++LP  +    VI IA  A  ++ ++TLYPSWRAA  +PAEALR E
Sbjct: 358 LLGIRFLTPSVYFLSSLPSKLAATDVIEIAAAAFLMSCVATLYPSWRAARVRPAEALRDE 417



>gi|53732302|ref|ZP_00349453.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rickettsia rickettsii]
          Length = 451

 Score =  272 bits (695), Expect = 2e-71
 Identities = 120/412 (29%), Positives = 205/412 (49%), Gaps = 19/412 (4%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
               I  RY R +  ++F   +S  S +G+ +GV AL+ V+SVMNGF  EL  NI+GL  
Sbjct: 42  FIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGLNG 101

Query: 65  QAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKD 123
             +++ + GS++  +++    +K D +  V  I  G  +     + +  ++ G+      
Sbjct: 102 DIVINRQGGSIDNYEEIKAKLLKQDYIKHVTFIAHGQALALGKSNNSGVLVKGMKLKDLS 161

Query: 124 PLTPYL--VNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
                   VN    D   GK  + LGEQLAS LGV  GD+IR++ P++   T  G +P  
Sbjct: 162 VRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGDKIRLISPNSVSTT-FGSMPRS 220

Query: 182 RLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL---SQ 237
           + F VI  F +   + D   +L+ +  A   +     +I    +   +P K  +     Q
Sbjct: 221 KEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSL-GNDINLIEINSLDPDKALTYSHKIQ 279

Query: 238 QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
             L       +W+    +   A+ +E+  M  +LSLI+ VAAFNII+SL ++V +K  ++
Sbjct: 280 SLLGPTLYVFNWQTLNSQFLSALAVERTAMFTILSLIITVAAFNIISSLFMLVKDKTSDI 339

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG--------- 348
           AIL+T G + +QIM++F+  G   G++G  LG  LG   +  +  +   +          
Sbjct: 340 AILRTMGASTKQIMLIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLERITGTKIFE 399

Query: 349 -VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +    +LP  +    +I+I  +++ +  L+T+YPS+RA+   P +ALRYE
Sbjct: 400 AAIYFLYSLPSKVRAEDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 451



>gi|22995331|ref|ZP_00039809.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Xylella fastidiosa Dixon]
          Length = 413

 Score =  272 bits (695), Expect = 2e-71
 Identities = 147/417 (35%), Positives = 237/417 (56%), Gaps = 22/417 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+ P+++ IGLRY+R +  + F  F+S  S +GI LGV  L+T L+VM+GF++E+++ +L
Sbjct: 1   MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            +   A +S++   + + Q     A+    V   AP    + +LQ        +M GI P
Sbjct: 61  QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQ-GERHQPAMMRGIVP 119

Query: 120 AQKDPLTPYLVN---VKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  ++             L+PG+YN++LG++LA  LGV+ GD + V++   +Q TP+G
Sbjct: 120 NQEAKVSVLAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQ-TQTTPVG 178

Query: 177 RIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F V G F     E+D    +VN+ED  ++MR     +TG RL L +      +
Sbjct: 179 TMPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKIMRMDG--VTGVRLKLHDMDHAWDV 236

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           +      L       DW      L+ +++MEK +MG+LLSLI+A+ AFN+++S  ++V +
Sbjct: 237 ASDLAVRLNGPYLVSDWTRENANLYSSLKMEKTVMGILLSLIIAMGAFNLVSSQVMLVTD 296

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII----- 347
           KQ ++AIL+T GL+P  +M VFMVQG+  GIIG + G   G +L   L  ++ +I     
Sbjct: 297 KQADIAILRTLGLSPAGVMRVFMVQGSLIGIIGTLSGVIGGVVLTWNLERILKLIESTFN 356

Query: 348 -----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +     LP  ++   V+VI L+A+A++ ++TLYP+WRAA  QPAEALRYE
Sbjct: 357 ITLLPEDVYYITGLPTDMQFPDVVVITLMALAMSFIATLYPAWRAARIQPAEALRYE 413



>gi|28262692|gb|EAA26196.1|   unknown [Rickettsia sibirica 246]
 gi|34581307|ref|ZP_00142787.1|   hypothetical protein [Rickettsia sibirica 246]
          Length = 424

 Score =  272 bits (695), Expect = 2e-71
 Identities = 122/412 (29%), Positives = 205/412 (49%), Gaps = 18/412 (4%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
               I  RY R +  ++F   +S  S +G+ +GV AL+ V+SVMNGF  EL  NI+GL  
Sbjct: 14  FIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGLNG 73

Query: 65  QAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKD 123
             +++ + GS++  +++    +K D V  V  I  G  +     + +  ++ G+      
Sbjct: 74  DIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAHGQALALGKSNNSGVLVKGMKLKDLS 133

Query: 124 PLTPYL--VNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
                   VN    D   GK  + LGEQLAS LGV  GD+IR++ P+ S  T  G +P  
Sbjct: 134 VRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGDKIRLISPNNSVSTTFGSMPRS 193

Query: 182 RLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL---SQ 237
           + F VI  F +   + D   +L+ +  A   +     +I    +   +P K  +     Q
Sbjct: 194 KEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSL-GNDINLIEINSLDPDKALTYSHKIQ 252

Query: 238 QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
             L       +W+    +   A+ +E+  M  +LSLI+ VAAFNII+SL ++V +K  ++
Sbjct: 253 SLLGPTLYVFNWQTLNSQFLSALAVERTAMFTILSLIITVAAFNIISSLFMLVKDKTSDI 312

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG--------- 348
           AIL+T G + +QIM++F+  G   G++G  LG  LG   +  +  +   +          
Sbjct: 313 AILRTMGASTKQIMLIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLERITGTKIFE 372

Query: 349 -VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +    +LP  +    +I+I  +++ +  L+T+YPS+RA+   P +ALRYE
Sbjct: 373 AAIYFLYSLPSKVRAEDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 424



>gi|49474194|ref|YP_032236.1|   Lipoprotein releasing system transmembrane protein lolC [Bartonella
           quintana str. Toulouse]
 gi|49239698|emb|CAF26073.1|   Lipoprotein releasing system transmembrane protein lolC [Bartonella
           quintana str. Toulouse]
          Length = 422

 Score =  272 bits (695), Expect = 2e-71
 Identities = 121/416 (29%), Positives = 202/416 (48%), Gaps = 20/416 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      I  RYM           +S +S IGI LGV ALV V++VMNGF  EL N ILG
Sbjct: 9   FSSYEWMIAFRYMIPNKKHVVASVISIISLIGIMLGVFALVVVMAVMNGFRTELLNRILG 68

Query: 62  LMPQAILSS-EHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSA-RSVAVGVMLGIDP 119
           +    I+ +   G  + + L  +   +DGV    P+  G  ++Q   +  +  ++ G+  
Sbjct: 69  MNGHLIVQTINSGFSDYKTLIPSLESVDGVKFALPVIEGQALVQGDLQGGSGALVRGMRK 128

Query: 120 AQKDPLTPYLVNVKQTDLEPGKY--NVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
              + L     N+K   L        V++G  LA +L +  G  +R++ P     TP G 
Sbjct: 129 QDLEKLKTVSQNIKLGSLAQFDKEEGVVIGSGLAEKLRLTVGSDLRIITPDGDA-TPFGV 187

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
            P  + + VI  F    SE D   + + + +A          +    L+L++P  VD + 
Sbjct: 188 TPRVKAYKVIAIFEVGMSEYDSIFVFMPLYEAQMFFNL-GDKVQSLELFLNDPDAVDQIK 246

Query: 237 ---QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
              ++ + +     DWR R    F A+++E+N+M  +LSLIV VAA NI++ L ++V +K
Sbjct: 247 PIVEKAIDQQVYLIDWRMRNQAFFSALQIERNVMFFILSLIVLVAALNIVSGLIMLVKDK 306

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------ 347
             ++AIL+T G     I+ +F+V G   G++G +LG   G +    +N++   +      
Sbjct: 307 SHDIAILRTMGAQKSTILRIFIVTGMMIGLVGTLLGLIFGVIATVNINHIQDFVSWLFNV 366

Query: 348 ----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 L     LP  ++  Q +++A +A+ ++ L+ L P+WRAA   P +ALRYE
Sbjct: 367 DVFNPQLYFLTKLPAQLDWRQTVMVAGMALFLSFLAALIPAWRAAKLDPVQALRYE 422



>gi|52425242|ref|YP_088379.1|   hypothetical protein MS1187 [Mannheimia succiniciproducens MBEL55E]
 gi|52307294|gb|AAU37794.1|   unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 397

 Score =  272 bits (695), Expect = 2e-71
 Identities = 183/401 (45%), Positives = 265/401 (66%), Gaps = 6/401 (1%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  PV+L+I LRY R ++ADRF R V+ L++ GI LGVMAL+ VLSVMNG E+  +  +L
Sbjct: 1   MNFPVSLYIALRYWRAKSADRFARLVTNLASSGIVLGVMALIIVLSVMNGLEKHQKQQVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID-P 119
             +P A+L  + G L+ Q         D V +  PI + +V+LQ+A+ V+ G ++G+  P
Sbjct: 61  SGIPHAVLMPQEGYLDLQ--AAQPSMPDFVRQAVPINSTNVILQTAQGVSAGHIIGVQKP 118

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
           +    L           L  G++ +++G +LA +L +N GD++R+M+   SQ+TP GR+P
Sbjct: 119 SDDLILDYLTQQQLSELLPAGEFKILIGNRLADKLRLNIGDKVRLMITENSQYTPFGRVP 178

Query: 180 SQRLFNVIGT-FAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           +QRLF V    F+ NSEV GYE+  N+ D  RLMR     + G+RL+LD+P ++ +L Q 
Sbjct: 179 TQRLFTVSDIYFSDNSEVSGYEIFANLSDIGRLMRIRPEQVQGYRLFLDDPFQITALPQF 238

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              +  K +DWR +KGE FQAVRMEKNMMGLL+SLI+ VA  NIITSL LMV++KQGE+A
Sbjct: 239 FSADKWKLEDWRSQKGEFFQAVRMEKNMMGLLISLIIIVAISNIITSLSLMVVDKQGEIA 298

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           ILQTQGL  RQ+  +F++QG   G++G I+G  LG L+   L +++ + G    G  LP 
Sbjct: 299 ILQTQGLNKRQVRRIFILQGFLVGLVGTIIGTILGVLITLNLADIIELFGQR--GIFLPT 356

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           ++E  Q+IVI   ++ ++LLST+YP++RAA  +PAEALRYE
Sbjct: 357 SLELGQIIVIVAFSLLLSLLSTIYPAYRAAKVEPAEALRYE 397



>gi|50120755|ref|YP_049922.1|   lipoprotein releasing system transmembrane protein [Erwinia
           carotovora subsp. atroseptica SCRI1043]
 gi|49611281|emb|CAG74728.1|   lipoprotein releasing system transmembrane protein [Erwinia
           carotovora subsp. atroseptica SCRI1043]
          Length = 415

 Score =  271 bits (693), Expect = 3e-71
 Identities = 112/412 (27%), Positives = 209/412 (50%), Gaps = 19/412 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           + P++L IGLR+ RGR        +S +ST+GI LGV  L+  LS MNGFEREL N IL 
Sbjct: 3   FPPLSLQIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLILGLSAMNGFERELNNRILA 62

Query: 62  LMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           ++P   +   +   +  Q    T  ++ GV   AP      +L+S   +    + G+DP 
Sbjct: 63  VVPHGEIEPVNQPFDGWQDFLPTIEQVPGVAAAAPYINFTGLLESGAKLQAIQVKGVDPQ 122

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           Q+  L+    Y++N       PG+  VI+G+ +A  L V +GD + VM+P++     + +
Sbjct: 123 QETHLSALPNYVLNDAWQRFRPGEQQVIIGQGVAKTLNVAQGDWVTVMIPNSDPEMKLMQ 182

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
            P +   +V G    + ++D    L+ + DA + +     ++TG  +  ++    + L +
Sbjct: 183 -PKRIRLHVSGILQLSGQLDHSLALIPLADAQQYLDM-GQSVTGIAIKANDVFSANKLVR 240

Query: 238 QKLPEG---SKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                       + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K 
Sbjct: 241 DAGKATNLYVHIRSWIGTYGYMYRDIQMVRTIMYLAMILVIGVACFNIVSTLVMAVKDKS 300

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------- 347
            ++A+L+T G +   I  +F+  G  AG++G+++GA +G +   QL  ++  I       
Sbjct: 301 SDIAVLRTLGASDGLIRAIFIWYGLLAGLLGSVIGAVVGVIATLQLTPMIRGIEALIGHK 360

Query: 348 ---GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
              G +     LP  +  + V ++   ++ ++L+++ YP+ RA+   PA  L
Sbjct: 361 LLSGDIYFIDFLPSELHLMDVFIVLGTSLVLSLIASWYPARRASRIDPARVL 412



>gi|45441566|ref|NP_993105.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis biovar Medievalis str. 91001]
 gi|45436427|gb|AAS61982.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis biovar Medievalis str. 91001]
          Length = 399

 Score =  270 bits (692), Expect = 4e-71
 Identities = 287/370 (77%), Positives = 329/370 (88%), Gaps = 1/370 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MYQPVALFIGLRYMRGRA+DRFGRFVSWLSTIGITLGVMAL+TVLSVMNGFER LQ+ IL
Sbjct: 1   MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPE-TAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           GLMPQA++++  GSL+P ++P  T   L GV+ + P+TT DVVLQSAR++A GVMLG+DP
Sbjct: 61  GLMPQALITTPQGSLDPNKIPASTLKSLSGVSDIVPLTTADVVLQSARNLAAGVMLGVDP 120

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
            Q +PL  YLVNV    L PG YN+ILGE+LA QLGV RG+ +R+MVPSASQFTPMGRIP
Sbjct: 121 QQHEPLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMGRIP 180

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           SQR+FN+IGTFAANSEVDGY++LVN +DASRLMRYP GNITGWRL+L +PL VDSLSQQ 
Sbjct: 181 SQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLSQQS 240

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
           LPEG+ W+DWRDRKGELFQAVRMEKNMMGLLLSLI+AVAAFNIITSLGL+VMEKQGEVAI
Sbjct: 241 LPEGTVWKDWRDRKGELFQAVRMEKNMMGLLLSLIIAVAAFNIITSLGLLVMEKQGEVAI 300

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
           LQTQGL+ RQIM+VFMVQGA+AG+IGA+LGA LG LLASQLN L+PI+GVL+DGA LPV 
Sbjct: 301 LQTQGLSRRQIMLVFMVQGATAGVIGALLGAGLGVLLASQLNTLIPILGVLIDGATLPVE 360

Query: 360 IEPLQVIVIA 369
           I+PLQV VIA
Sbjct: 361 IDPLQVTVIA 370



>gi|21231570|ref|NP_637487.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|21113256|gb|AAM41411.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 416

 Score =  270 bits (690), Expect = 6e-71
 Identities = 146/417 (35%), Positives = 243/417 (58%), Gaps = 22/417 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+ + IGLRY+R +  + F  F+S  S +GI LGV  L+T L+VM+GF++E+++ +L
Sbjct: 4   MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 63

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            +   A +S+E   + + +   E A     +   AP    + +LQ  R     ++ G+ P
Sbjct: 64  QMAAHATVSAEGAPMQDWRHAVEVASADPRIAGAAPYIETESLLQGPRK-QPAIVRGVIP 122

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
           +++  ++     +       L PG YN+++G++LA  LGV+ GD I V++   +Q TP+G
Sbjct: 123 SEEAKVSVLAKKMQQGSVDSLTPGSYNIVIGKELALWLGVDVGDSIVVLLSD-TQATPLG 181

Query: 177 RIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F V G F A   E+D    +VN+ED +R++R     +TG RL L +  +  ++
Sbjct: 182 AMPRLKRFTVSGIFEAGYNEIDRGLAVVNMEDLARVLRMDG--VTGVRLRLHDMDQAFTV 239

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           ++     L    +  DW      L+ +++MEK +MG+LLSLIVA+ AFN+++S  ++V +
Sbjct: 240 ARDLALKLRGPYRVSDWTQENANLYHSLKMEKTVMGILLSLIVAMGAFNLVSSQVMLVTD 299

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII----- 347
           KQ ++AIL+T GL+P  +M VFMVQG+  G +G I+G   G +L   L  ++  I     
Sbjct: 300 KQADIAILRTLGLSPGGVMQVFMVQGSLIGFMGTIMGVIGGIVLTLNLERILGAIEAVFS 359

Query: 348 -----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +     LP  ++   V+VI +VA+ ++ L+TLYP+WRA+ TQPAEALRYE
Sbjct: 360 VKLLPEDVYYITGLPTDMQTQDVVVITVVALVMSFLATLYPAWRASRTQPAEALRYE 416



>gi|54309555|ref|YP_130575.1|   putative ABC transporter, integral membrane protein [Photobacterium
           profundum SS9]
 gi|46913991|emb|CAG20773.1|   putative ABC transporter, integral membrane protein [Photobacterium
           profundum]
          Length = 414

 Score =  270 bits (690), Expect = 7e-71
 Identities = 120/413 (29%), Positives = 220/413 (53%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P++L+IG R+ R +  +R   F+S  S +GI +GV  ++  LS MNGFERELQN IL
Sbjct: 1   MFRPLSLYIGSRFSRAKQRNRMVSFISISSILGIAVGVAVIIIGLSAMNGFERELQNRIL 60

Query: 61  GLMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P   L +    L   Q + ET  K   V   AP  +   +L+   ++    + G++P
Sbjct: 61  AVIPHGELEAVKVPLTEWQPILETVKKHPRVTGAAPYVSFTALLEKGSNLKAVAVRGVNP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            ++  ++    Y+ +        G   +ILG+ +A +L +  GD I  M+P+A     + 
Sbjct: 121 EEEIQVSALPQYVKDNAWQRFSAGNKQIILGQGVAQKLQIGVGDWITAMIPNADSEKKL- 179

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           R P +    V G  A   ++D    ++ + DA + +    G ++G  L +D  L   S+ 
Sbjct: 180 RSPHRIRLQVSGLLALGGQIDHNFAIIPLADAQQYLSMGEG-VSGISLNVDNVLDAQSIV 238

Query: 237 QQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           ++    LP     + W  + G L++ ++M + +M L++ L++ VA FNII++L + V ++
Sbjct: 239 REVGFTLPVYVYLKSWTQKYGYLYRDIQMVRTIMYLVMVLVIGVACFNIISTLMMSVKDR 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM--------- 344
             ++AIL+T G T   +  +F+  G  +G++G+++G+ +G+ +A  L +L+         
Sbjct: 299 APDIAILRTMGATDGLVKSIFIWHGLLSGVVGSLVGSIIGSFVAVNLTSLVKGLETLIGH 358

Query: 345 -PIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             + G +     LP  +    V+V+A+ A+ ++LL+T YP+ RA+A QPA  L
Sbjct: 359 QFLSGDIYFVDFLPTELAINDVVVVAITAILLSLLATWYPARRASALQPALVL 411



>gi|27361560|gb|AAO10468.1|   Conserved hypothetical protein [Vibrio vulnificus CMCP6]
 gi|27365413|ref|NP_760941.1|   hypothetical protein VV12080 [Vibrio vulnificus CMCP6]
          Length = 373

 Score =  269 bits (688), Expect = 1e-70
 Identities = 193/373 (51%), Positives = 270/373 (72%), Gaps = 2/373 (0%)

Query: 29  LSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLD 88
           +ST GIT+GVM+LVTVLSVMNGFE +L+  ILG++PQA++S + G       P+    L 
Sbjct: 1   MSTAGITVGVMSLVTVLSVMNGFEAQLKERILGVLPQAVVSMDGGKTPHTTPPDFVRALS 60

Query: 89  GVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGE 148
              +  P+   + V+QS   ++VG ++GI+P+  DP+  +L+  + + LE GKY V LG 
Sbjct: 61  PHYQPTPLVRSEAVIQSPSQLSVGYLIGIEPSADDPIENHLIAGRLSQLEAGKYQVFLGH 120

Query: 149 QLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDA 208
            LA  L V+ GD++R+MV SASQFTP+GRIPSQR F V G F   S++DG  M+ +IEDA
Sbjct: 121 FLARSLNVSMGDKVRLMVTSASQFTPLGRIPSQRNFTVAGMFNTGSDIDGQLMVTHIEDA 180

Query: 209 SRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMG 268
            RL+R P+  I+GWRL+ D+P +V   +   LP+G +W DWR ++GELFQAV+MEKNMMG
Sbjct: 181 GRLLRLPSKTISGWRLYFDDPFQVTEAANTPLPDGWQWSDWRAQRGELFQAVKMEKNMMG 240

Query: 269 LLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAIL 328
           L+L LIVAVAAFNII++L ++VMEKQ EVAIL+TQG+    IM +FMVQGAS+GIIG++ 
Sbjct: 241 LMLGLIVAVAAFNIISALIMVVMEKQSEVAILKTQGMNSFGIMAIFMVQGASSGIIGSLF 300

Query: 329 GAALGALLASQLNNLMPIIGV--LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWR 386
           G A+G LL+  LN ++   GV     G +LPV I+P Q++ + ++A+ ++LL+TLYPS+R
Sbjct: 301 GGAVGVLLSQNLNTILETAGVALFTFGGSLPVLIQPFQIVAVVVLAVLLSLLATLYPSYR 360

Query: 387 AAATQPAEALRYE 399
           A++ +PAEALRYE
Sbjct: 361 ASSVKPAEALRYE 373



>gi|52007738|ref|ZP_00335115.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Thiobacillus denitrificans
           ATCC 25259]
          Length = 385

 Score =  269 bits (687), Expect = 2e-70
 Identities = 142/387 (36%), Positives = 217/387 (56%), Gaps = 20/387 (5%)

Query: 31  TIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSL-NPQQLPETAVKLDG 89
             GI LGVMAL+ VLSVMNGF+ EL+  ILG+     +S     L + + +   A +   
Sbjct: 1   MGGIALGVMALIVVLSVMNGFQEELRARILGVAAHLEISGPGDRLADWRSVLAQAQRNKD 60

Query: 90  VNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPL---TPYLVNVKQTDLEPGKYNVIL 146
           V   AP      +L +   V   ++ GI P  ++ +   + ++   + TDL+PG++ +IL
Sbjct: 61  VVSGAPYVNAQGMLANGDMVRGAIIRGIVPGMENAVADFSRHMKAGRLTDLKPGEFGIIL 120

Query: 147 GEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANS-EVDGYEMLVNI 205
           G +LA  L V  GD++ ++ P  +  TP G +P  + F V G F A   E D    L+++
Sbjct: 121 GGELARALNVFPGDKLVLLTPQGN-ITPAGVMPRVKQFTVTGIFEAGMFEYDSGLALIHL 179

Query: 206 EDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK---LPEGSKWQDWRDRKGELFQAVRM 262
           +DA +L+R    +++G RL LDE  +   ++++    L       DW       F+AV +
Sbjct: 180 QDAQKLLRL-GQDVSGVRLKLDELFRAPFVTRELAQTLTGDYYLTDWTQSHANFFRAVAI 238

Query: 263 EKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAG 322
           EK MM L+L LIVAVAAFNI+++L + V +KQ ++AIL+T G  P  +M +F+VQGA  G
Sbjct: 239 EKRMMFLILLLIVAVAAFNIVSTLVMAVTDKQSDIAILRTLGARPGSVMAIFIVQGAFIG 298

Query: 323 IIGAILGAALGALLASQLNNLMPIIG----------VLLDGAALPVAIEPLQVIVIALVA 372
           ++GA +G   G  LA  L  ++PII            +     LP  ++  +V +I  V+
Sbjct: 299 VLGAAIGVTGGVFLALNLETVVPIIERMAGMDLFPADVYYINELPSKLDWSEVTLIGGVS 358

Query: 373 MAIALLSTLYPSWRAAATQPAEALRYE 399
           + I+LL+TLYPSWRA+   PAEALRYE
Sbjct: 359 LLISLLATLYPSWRASRINPAEALRYE 385



>gi|49475641|ref|YP_033682.1|   Lipoprotein releasing system transmembrane protein lolC [Bartonella
           henselae str. Houston-1]
 gi|49238448|emb|CAF27676.1|   Lipoprotein releasing system transmembrane protein lolC [Bartonella
           henselae str. Houston-1]
          Length = 422

 Score =  268 bits (686), Expect = 2e-70
 Identities = 125/416 (30%), Positives = 204/416 (49%), Gaps = 20/416 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      I  RYM           +S +S +GI LGV ALV V++VMNGF  EL N ILG
Sbjct: 9   FSSYEWMIAFRYMIPNKKHVVASVISIISLVGIMLGVFALVVVMAVMNGFRTELLNRILG 68

Query: 62  LMPQAILSS-EHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSA-RSVAVGVMLGIDP 119
           +    I+ +   G  +   L  +   ++GV    P+  G  ++Q   +  +  ++ G+  
Sbjct: 69  MNGHLIIQTINSGFSDYNNLIPSIESVNGVKFALPVIEGQALVQGELQGGSGALVRGMRK 128

Query: 120 AQKDPLTPYLVNVKQTDLEPGKY--NVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
              + L     N+K   L        V +G  LA +LG+  G  +R++ P   + TP G 
Sbjct: 129 QDLEKLKTVSENIKLGSLAQFDQEEGVAIGISLAEKLGLTIGSDLRIITPDGDE-TPFGV 187

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
            P  + + V+  F    SE D   + + + +A          I    L+L++P  VD + 
Sbjct: 188 TPRVKAYKVVAIFEVGMSEYDSIFVFMPLHEAQAFFNL-GNKIQSLELFLNDPDSVDRIK 246

Query: 237 ---QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
              ++ + +     DWR R    F A+++E+N+M  +LSLIV VAA NII+ L ++V +K
Sbjct: 247 PILEKLIDQQVYLIDWRTRNQAFFSALQIERNVMFFILSLIVLVAALNIISGLIMLVKDK 306

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------ 347
             ++AIL+T G     I+ +F+V G   G+IG +LG   G +  + +N++   I      
Sbjct: 307 SHDIAILRTMGAQQSAILRIFIVTGMMIGLIGTLLGLIFGVIATANINHIQDFISWLFNV 366

Query: 348 ----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 L     LP  IE  Q +++A++A+ ++ L+ L P+WRAA   P +ALRYE
Sbjct: 367 DVFNPQLYFLTKLPAKIEWGQTVMVAVMALFLSFLAALIPAWRAAKLDPVQALRYE 422



>gi|56677757|gb|AAV94423.1|   lipoprotein releasing system transmembrane protein LolE
           [Silicibacter pomeroyi DSS-3]
 gi|56696020|ref|YP_166374.1|   lipoprotein releasing system transmembrane protein LolE
           [Silicibacter pomeroyi DSS-3]
          Length = 447

 Score =  266 bits (681), Expect = 8e-70
 Identities = 117/423 (27%), Positives = 201/423 (47%), Gaps = 27/423 (6%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           + P    I  RY+R R A+     ++W+S IGITL V AL+  L+V +GF  +    ILG
Sbjct: 27  FAPFEWKIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSDFVGTILG 86

Query: 62  LMPQAILSSE----------HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAV 111
                 + +               N  ++     ++ GV R AP+  G V+  +    A 
Sbjct: 87  ANAHVTVYNPGEYRENGQIDRTIPNYAEMAARVAEVAGVTRAAPLVKGQVMAAAQNRNAG 146

Query: 112 GVMLGIDPAQKDPLT-PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSAS 170
             + GI       L      +    DL      + LG  +A +LGV  GD+I+++ P+  
Sbjct: 147 VEVFGIATGDLAALPGITNSDRSYGDLSRFDQGIALGSGVARELGVTVGDRIKLISPNG- 205

Query: 171 QFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEP 229
             TPMG  P    + V+  F+A   ++D   + +   +A        G      + + EP
Sbjct: 206 ARTPMGTSPRVNAYEVVYVFSAGRYDIDRTRVYMPFGEAQAYFNR-EGVADEIEVMVSEP 264

Query: 230 LKVDSLSQQKL---PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSL 286
            ++D +    L    +G++   W+D  G   +A+ +E N+M ++LS++V +A  NI++ L
Sbjct: 265 ERLDRVLIPILSAAGDGAQVWTWQDASGGFLRALEVEDNVMFIILSILVLIATMNIVSGL 324

Query: 287 GLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPI 346
            ++V  K  ++ IL+T GL+   I+ VF + GA  GI+G ++G ALG L A  ++ +   
Sbjct: 325 IMLVKNKGRDIGILRTIGLSEGSILRVFFICGAFTGILGTLMGVALGCLFAIYIDPIFSF 384

Query: 347 IGVLLDG----------AALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           +  ++ G           ALP  +    V+  A +++ ++ + T +P+ RAA   P EAL
Sbjct: 385 VNFVMGGGVWDPAIRGIYALPAELRLGDVLKAAGLSLGLSCIVTYFPARRAARLNPVEAL 444

Query: 397 RYE 399
           RYE
Sbjct: 445 RYE 447



>gi|33592244|ref|NP_879888.1|   lipoprotein releasing system transmembrane protein [Bordetella
           pertussis Tohama I]
 gi|33571889|emb|CAE41405.1|   lipoprotein releasing system transmembrane protein [Bordetella
           pertussis Tohama I]
          Length = 410

 Score =  266 bits (680), Expect = 9e-70
 Identities = 138/406 (33%), Positives = 218/406 (53%), Gaps = 25/406 (6%)

Query: 15  RGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGS 74
           R    DRF  F++  S  GI LGV AL+ VLSVMNGF++E+++ +L ++P   L     +
Sbjct: 7   RRGCRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAA 66

Query: 75  LN-----PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTP-- 127
                   +Q  + A     V   AP      +L   +++    + GIDPA +  ++   
Sbjct: 67  PERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIP 126

Query: 128 -YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNV 186
             +V+ K +DL  G +  +LG  LA  LGV  GD + ++ P  S  +P G  P  R F V
Sbjct: 127 RQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGS-ISPAGFAPRMRQFTV 185

Query: 187 IGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK---LPE 242
           +G F++   E D   + ++ EDA+++ R       G RL + +  +   ++ +    LP 
Sbjct: 186 VGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTA--GVRLRVADMQRAPEVAAELTKVLPP 243

Query: 243 GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQT 302
                DW       F AV+ EK MM L+L+LIVAVAAFN+++SL + V +KQ ++AIL+T
Sbjct: 244 YVMAADWSRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRT 303

Query: 303 QGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL----------LD 352
            G  P ++  +F+VQGA  G++G +LG A G  +A  ++ ++P I  L            
Sbjct: 304 LGAGPGEVARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYF 363

Query: 353 GAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRY 398
            +ALP   +   +I I L ++ ++LL+TLYPSWRA+  QPA+ LR+
Sbjct: 364 ISALPSDPQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRH 409



>gi|45915776|ref|ZP_00197222.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Mesorhizobium sp. BNC1]
          Length = 427

 Score =  265 bits (679), Expect = 1e-69
 Identities = 116/416 (27%), Positives = 198/416 (47%), Gaps = 20/416 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      +  RY+R R  +     ++ +S +GI LGV  L+ V++VMNGF  EL   ILG
Sbjct: 14  FSYFERLVAWRYLRSRRKETVVSVIALISFLGIMLGVATLIVVMAVMNGFRGELLTRILG 73

Query: 62  LMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSV-AVGVMLGIDP 119
           +    I+      L +   +     ++ GV    PI  G V+        +  ++ G+  
Sbjct: 74  VNGHIIVQPVDSPLSDYDAVAGRIAQVPGVRDAMPIVEGQVLASGRSGAGSGALVRGVRA 133

Query: 120 AQKDPLTPYLVNVKQTDLEPGK--YNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
                +     N++   L        V +G ++A  LG+  GD I ++ P     TP G 
Sbjct: 134 EDLTKIDLVAKNIRVGSLVDFAAGQGVAIGSRMAQSLGLAVGDSITLVAPEGD-VTPFGT 192

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL- 235
            P  + + V   F    SE D   + + +E+A        G +    ++ D P  V +L 
Sbjct: 193 TPRVKSYPVTAVFEIGMSEYDASIIYMPLEEAQLFFNV-EGLVQFIEVFADHPDNVGTLR 251

Query: 236 --SQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
              ++         DWR R    F A+++E+N+M ++L++IV VAA NII+ + ++V +K
Sbjct: 252 PLVEEAAMRPVSISDWRQRNQVFFSALQVERNVMFMILTMIVLVAALNIISGMIMLVKDK 311

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL--- 350
             ++AIL+T G T   IM +F++ GAS G+ G   G  LG++L   + ++      L   
Sbjct: 312 SHDIAILRTMGATSGSIMRIFLMAGASIGVAGTFAGLVLGSMLCLNVESIREFFTWLSGT 371

Query: 351 -------LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                     + LP  +E  + I + L+A+ ++ L+TL+P+WRA+   P +ALRYE
Sbjct: 372 VIFDPEVYFLSQLPADMESGETISVVLMALILSFLATLFPAWRASRLDPVDALRYE 427



>gi|29654316|ref|NP_820008.1|   lipoprotein ABC transporter, permease protein, putative [Coxiella
           burnetii RSA 493]
 gi|29541583|gb|AAO90522.1|   lipoprotein ABC transporter, permease protein, putative [Coxiella
           burnetii RSA 493]
          Length = 414

 Score =  265 bits (678), Expect = 2e-69
 Identities = 144/418 (34%), Positives = 238/418 (56%), Gaps = 23/418 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M +P+AL++GLRY R +  + F  F+S +S +GI LGV  L+TVLSVMNGF+ E++ +  
Sbjct: 1   MIRPLALYVGLRYTRAKRRNHFISFISLVSMLGIALGVAVLITVLSVMNGFDYEIRTHFF 60

Query: 61  GLMPQAIL-SSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            L PQ  + + ++      +L +T      V   AP  TG  +L +   V+   +LG+ P
Sbjct: 61  ALAPQVTVMTGQNIEKTWPELQKTIASNPEVVASAPFVTGMGLLSNEGIVSGATVLGVVP 120

Query: 120 AQKDPLTPYL---VNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
           +Q+  ++      V  K + L PG YN+ILG +LA QLG++ GD++ +  P  +  TP+G
Sbjct: 121 SQEKKVSQLDGKLVGGKLSSLNPGSYNIILGRKLADQLGLSIGDKVSLFTPQTT-TTPLG 179

Query: 177 RIPSQRLFNVIGTF--AANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDS 234
             P  R F + G F   +    D     +N++D  RL    A   +G  + +    +  S
Sbjct: 180 IFPQFRRFTISGIFSTKSGFGFDAGIAYINMQDGFRLFSQGA---SGLHIKIKNLYQAQS 236

Query: 235 LSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVM 291
           ++QQ    LP      +W ++ G  F+A+ MEK +M ++L LIV VA FN++++L ++V 
Sbjct: 237 VTQQLQKLLPGEFIVTNWTEQFGSFFKAIAMEKTIMFVILLLIVGVAIFNLVSTLVMVVN 296

Query: 292 EKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII---- 347
           +K+ ++AIL+T G +PR IM +F++QGA  GI+G ++G   G +LA     ++  I    
Sbjct: 297 DKRADIAILRTLGASPRTIMSIFVIQGAIVGIVGTLIGVIGGVILAVNATAIVNGIQQIF 356

Query: 348 ------GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                   +     LP  ++ L V+ ++L+A A++L++T+YP++ A  T+PAEALRYE
Sbjct: 357 HVQFLKSSIYFVNFLPSRLQWLDVLNVSLIAFALSLIATIYPAFIAFRTEPAEALRYE 414



>gi|15074219|emb|CAC45866.1|   HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti]
 gi|15965040|ref|NP_385393.1|   HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti 1021]
          Length = 408

 Score =  264 bits (674), Expect = 4e-69
 Identities = 123/410 (30%), Positives = 200/410 (48%), Gaps = 20/410 (4%)

Query: 8   FIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI 67
            +  RY+R R  + F   ++  S IGI LGV  L+ V++VMNGF  EL + ILG+    I
Sbjct: 1   MVAWRYLRSRRKEAFISVIAGFSFIGIMLGVGTLIIVMAVMNGFRTELISRILGMNGHMI 60

Query: 68  LSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQS-ARSVAVGVMLGIDPAQKDPL 125
           +    G L N   L      + GV    PI  G V+ Q    +    ++ GI       L
Sbjct: 61  VQPLDGPLTNYADLATRFSAVPGVTMAIPIVEGQVLAQGLGDASTGALVRGIRADDLTKL 120

Query: 126 TPYLVNVKQTDL--EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRL 183
                +++  DL        V +G ++A QLG+  G  I +  P+    TPMG  P  + 
Sbjct: 121 KSISEHIQSGDLVGFASGSGVAIGSRMAEQLGIRVGGTITLTSPNGD-VTPMGMNPRVKA 179

Query: 184 FNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPE 242
           + V   F    SE D   + + +E+A        G +    ++ + P  VD L +     
Sbjct: 180 YTVSAIFEMGMSEYDATIIFMPLEEAQLYFN-AEGLVQSIEIFAEHPDAVDELRKPVEDA 238

Query: 243 ---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
                   DWR+R    F A+ +E+N+M ++L+LIV VAA NII+ L ++V +K  ++AI
Sbjct: 239 AGRQIFITDWRERNRTFFSALEVERNVMFMILTLIVLVAALNIISGLIMLVKDKGSDIAI 298

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV---------- 349
           L+T G T   +M +F + GA+ G+ G I G ALG ++   + ++                
Sbjct: 299 LRTMGATSGSVMRIFFMTGAAIGVTGTIAGVALGVVVCLNIESIRQFFSWVSGATLFDPE 358

Query: 350 LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           L   + LP  +   + + + ++A+A++ L+T++P+WRA+   P +ALRYE
Sbjct: 359 LYFLSQLPADMNADETVTVVVMALALSFLATIFPAWRASRLDPVQALRYE 408



>gi|17935189|ref|NP_531979.1|   ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|17739696|gb|AAL42295.1|   ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15156341|gb|AAK87083.1|   AGR_C_2376p [Agrobacterium tumefaciens str. C58]
 gi|25321157|pir||B97516   hypothetical protein AGR_C_2376 [imported] - Agrobacterium
           tumefaciens (strain C58, Cereon)
 gi|25321159|pir||AI2734   ABC transporter, membrane spanning protein Atu1289 [imported] -
           Agrobacterium tumefaciens (strain C58, Dupont)
 gi|15888617|ref|NP_354298.1|   hypothetical protein AGR_C_2376 [Agrobacterium tumefaciens str.
           C58]
          Length = 435

 Score =  264 bits (674), Expect = 4e-69
 Identities = 122/416 (29%), Positives = 204/416 (49%), Gaps = 20/416 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      +  RY+R R  + F   ++  S +GI LGV  L+ V++VMNGF  EL + ILG
Sbjct: 22  FSAFERMVAWRYLRSRRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELISRILG 81

Query: 62  LMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVG-VMLGIDP 119
           +    I+       N   +L +    + GV    P+  G  +         G ++ G+  
Sbjct: 82  INGHMIVQPIDQPFNNYDELAKKFSAVPGVTMALPLVEGQTLASGRGGAGSGALVRGVRQ 141

Query: 120 AQKDPLTPYLVNVKQTDL--EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
              D +     N+K  DL        V++G +LASQLGV  GD I ++ P     TPMG 
Sbjct: 142 EDIDKIKEVATNIKTGDLVGFMAGDGVLVGSRLASQLGVTAGDDITLISPEGD-VTPMGI 200

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL- 235
            P  + + + G F    SE D   + + + +A        G +    L++  P  VD + 
Sbjct: 201 NPRVKSYKISGVFEIGMSEYDASMIYMPLSEAQLYFN-ANGIVQSIELYVSRPDDVDGIR 259

Query: 236 --SQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
              +Q         DWR R    F A+++E+N+M ++L+LIV VAA NII+ L ++V +K
Sbjct: 260 PLVEQAAERQIYITDWRQRNQTFFSALQVERNVMFMILTLIVLVAALNIISGLIMLVKDK 319

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL---------- 343
             ++AIL+T G +   +M +F + GA+ G +G   G ALG L+   + ++          
Sbjct: 320 GSDIAILRTMGASSGAVMRIFFMTGAAIGTVGTFAGVALGVLVCLNVESIRQFFSWVSGT 379

Query: 344 MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           +     L   + LP  ++  + I + ++A+ ++ L+T++P+WRA+   P +ALRYE
Sbjct: 380 VLFDPQLYFLSQLPAEMDLSETITVVIMALTLSFLATIFPAWRASKLDPVQALRYE 435



>gi|21108306|gb|AAM36938.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|21242820|ref|NP_642402.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 413

 Score =  263 bits (673), Expect = 6e-69
 Identities = 147/417 (35%), Positives = 243/417 (58%), Gaps = 22/417 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+ + IGLRY+R +  + F  F+S  S +GI LGV  L+T L+VM+GF++E+++ +L
Sbjct: 1   MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            +   A +S+E   + + Q   E A+    V   AP    + +LQ  R     ++ G+ P
Sbjct: 61  QMAAHATVSAEGAPMRDWQHAVEVAMSDSRVAGAAPYIETESLLQGPRK-QPAIVRGVIP 119

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
           A++  ++     +       L PG YN+++G++LA  LGV+ GD I V++   +Q TP+G
Sbjct: 120 AEEGKVSVLAKKMQQGSVDSLTPGSYNIVIGKELALWLGVDVGDSIVVLLSD-TQATPLG 178

Query: 177 RIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F V G F A   E+D    +VN++D +R++R     +TG RL L +  +   +
Sbjct: 179 AMPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRMDG--VTGVRLRLHDMDQAWPV 236

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           ++     L    +  DW      L+ +++MEK +MG+LLSLIVA+ AFN+++S  ++V +
Sbjct: 237 ARDLAVRLHGPYRVSDWTQENANLYHSLKMEKTVMGILLSLIVAMGAFNLVSSQVMLVTD 296

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII----- 347
           KQ ++AIL+T GL+P  +M VFMVQG+  G +G  +G   G +L   L  ++ +I     
Sbjct: 297 KQADIAILRTLGLSPAGVMQVFMVQGSLIGFMGTFMGVIGGIVLTLNLERILGVIETIFS 356

Query: 348 -----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  +     LP  ++   V+VI +VA+ ++ L+TLYP+WRA+ TQPAEALRYE
Sbjct: 357 VKLLPEDVYYITGLPTDMQTQDVVVITVVALVMSFLATLYPAWRASRTQPAEALRYE 413



>gi|59713647|ref|YP_206422.1|   Lipoprotein releasing system transmembrane protein LolE [Vibrio
           fischeri ES114]
 gi|59481895|gb|AAW87534.1|   Lipoprotein releasing system transmembrane protein LolE [Vibrio
           fischeri ES114]
          Length = 414

 Score =  263 bits (672), Expect = 7e-69
 Identities = 117/413 (28%), Positives = 211/413 (51%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+ P++LFIG R+ R +  ++   F+S  ST+GI +GV  ++  LS MNGFERELQN +L
Sbjct: 1   MFSPLSLFIGSRFARAKQRNKMVSFISISSTLGIAIGVAVIIIGLSAMNGFERELQNRVL 60

Query: 61  GLMPQAILSSEH-GSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P A L        + Q +   A K   V   AP      +L+    +    + G++P
Sbjct: 61  SVIPHAELEGVKKPVTDWQSMMIQAKKHPKVTGAAPYVRFTALLERGSKLKAVEVRGVEP 120

Query: 120 AQKD---PLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
             ++    L  Y+        E  K +VILG+ +A  L V  GD I  M+P  +    + 
Sbjct: 121 LLENSVSKLPEYIDKAAWNAFEANKQSVILGKGVADTLNVKVGDWITAMIPDENADRQL- 179

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           R P ++   V+G  +   +VD    +V ++DA + +     ++TG  L +   L    + 
Sbjct: 180 RSPKRQRLQVVGLLSLGGQVDHGLAIVPLKDAQQYINL-GDSVTGVSLQVSSVLNAQDIV 238

Query: 237 QQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           ++    L E    + W  + G L++ +++ +++M L++ L++ VA FNI+++L + V ++
Sbjct: 239 REVGGTLSEYVYLRSWIQKYGYLYRDIQLVRSIMYLVMVLVIGVACFNIVSTLMMAVKDR 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM--------- 344
            G++AIL+T G     I  +F+ QG  +G+ G+I G+ LG+++A  L  ++         
Sbjct: 299 AGDIAILRTMGANDGLIKRIFVCQGIFSGVTGSIAGSVLGSVVALNLTPMIKALESLIGH 358

Query: 345 -PIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             + G +     LP  +    V ++   A+ ++ ++T YP+ RA+  QPA  L
Sbjct: 359 QFLSGDIYFVDFLPSQLVWSDVAIVTCTAILLSSIATWYPARRASRLQPAAVL 411



>gi|23467309|ref|ZP_00122892.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus somnus 129PT]
          Length = 396

 Score =  261 bits (668), Expect = 2e-68
 Identities = 175/400 (43%), Positives = 250/400 (62%), Gaps = 5/400 (1%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++LFI LRY R ++AD FG+ V+ L+T+GI LGVMAL+ VLSVMNG E+  +  +L
Sbjct: 1   MTFPISLFIALRYWRAKSADHFGQLVTTLATVGIILGVMALIIVLSVMNGLEKYQKQQVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             +P +IL  ++ S+            D V +V PI T  VV Q+A+ V+ G +LG+   
Sbjct: 61  SNIPHSILMPKNNSIYLTASQPDMP--DFVQKVVPINTTSVVFQTAQGVSAGQILGVQKF 118

Query: 121 QKDPLTPYLVNVKQTDLEP-GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
             DPL         + L P G++ +I+G +LA +L V  GD++RVMV   SQ+TP GR+P
Sbjct: 119 SDDPLLSEFSENHFSQLLPIGEFKLIIGWKLAQKLNVQIGDKVRVMVTENSQYTPFGRVP 178

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
            QRLF +   +++ SE   Y +  N+ D  RLMR     + G+RL+L +P  +  L +  
Sbjct: 179 VQRLFTISDIYSSFSEQASYAVFANLADIGRLMRIKPEQVQGYRLFLQDPFFISELPKFF 238

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
             E  K  DWR +KGE FQAVRMEKNMM LL+SLI+ VA  NI+TSL LMV++KQGE+AI
Sbjct: 239 PTEQWKIVDWRSQKGEFFQAVRMEKNMMSLLISLIIVVAVSNIVTSLSLMVVDKQGEIAI 298

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
           LQTQGL   Q+  +F++QG   G  GA+LG  LG ++A  L  ++  I     G  LP  
Sbjct: 299 LQTQGLRKGQVRNIFILQGFFVGASGAVLGGGLGVVVAMNLAKIIQWIN--PQGIFLPTE 356

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           I   Q+ +I   ++ ++L+ST+YP++RA+  +PA+ALRYE
Sbjct: 357 INVYQIALILFFSLTLSLISTIYPAYRASKIEPAQALRYE 396



>gi|32030057|ref|ZP_00132977.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus somnus 2336]
          Length = 396

 Score =  261 bits (668), Expect = 2e-68
 Identities = 174/404 (43%), Positives = 249/404 (61%), Gaps = 13/404 (3%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++LFI LRY R ++AD FG+ V+ L+T+GI LGVMAL+ VLSVMNG E+  +  +L
Sbjct: 1   MTFPISLFIALRYWRAKSADHFGQLVTTLATVGIILGVMALIIVLSVMNGLEKYQKQQVL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDG----VNRVAPITTGDVVLQSARSVAVGVMLG 116
             +P +IL  ++ S+                  V +V PI T  VV Q+A+ V+ G +LG
Sbjct: 61  SNIPHSILMPKNNSI------YLIASQPDMPDFVQKVVPINTTSVVFQTAQGVSAGQILG 114

Query: 117 IDPAQKDPLTPYLVNVKQTDLEP-GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPM 175
           +     DPL         + L P G++ +I+G +LA +L V  GD++RVMV   SQ+TP 
Sbjct: 115 VQKFSDDPLLSEFSENHFSQLLPIGEFKLIIGWKLAQKLNVQIGDKVRVMVTENSQYTPF 174

Query: 176 GRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
           GR+P QRLF +   +++ SE   Y +  N+ D  RLMR     + G+RL+L +P  +  L
Sbjct: 175 GRVPVQRLFTISDIYSSFSEQASYAVFANLADIGRLMRIKPEQVQGYRLFLQDPFFISEL 234

Query: 236 SQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
            +    E  K  DWR +KGE FQAVRMEKNMM LL+SLI+ VA  NI+TSL LMV++KQG
Sbjct: 235 PKFFPTEQWKIVDWRSQKGEFFQAVRMEKNMMSLLISLIIVVAVSNIVTSLSLMVVDKQG 294

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAA 355
           E+AILQTQGL   Q+  +F++QG   G  GA+LG  LG ++A  L  ++  I     G  
Sbjct: 295 EIAILQTQGLRKGQVRNIFILQGFFVGASGAVLGGGLGVVVAMNLAKIIQWINPQ--GIF 352

Query: 356 LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           LP  I   Q+ +I   ++ ++L+ST+YP++RA+  +PA+ALRYE
Sbjct: 353 LPTEINVYQIALILFFSLTLSLISTIYPAYRASKIEPAQALRYE 396



>gi|48849475|ref|ZP_00303718.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 413

 Score =  261 bits (668), Expect = 2e-68
 Identities = 121/412 (29%), Positives = 195/412 (47%), Gaps = 17/412 (4%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
            P    I  RYM     + F   V+ +S + + LGV ALV V+SVMNGF  EL + I+GL
Sbjct: 4   SPFEWTIAKRYMLPGRGEAFIALVAGISLVAVMLGVAALVIVMSVMNGFRAELLDKIVGL 63

Query: 63  MPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
              AI+ +  G L+  Q + +   +   V   +P+    ++      V   ++ G     
Sbjct: 64  NGHAIIQAYGGRLDNWQDILKRVQQTPDVTHASPLIEQPLLASFNGRVEAILVRGNTAED 123

Query: 122 KDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
              L    V+     L PG  NV LG +LA  LG   GD I ++ P     TP G +P +
Sbjct: 124 IKRLEDKRVDGVIGSLRPGSGNVALGSRLAENLGARVGDSITIINPQGRS-TPFGTVPRE 182

Query: 182 RLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS---Q 237
             + V   F     + D   +++ I DA  L+      I    +       V       +
Sbjct: 183 IAYTVSAIFEVGVYDYDQAYVVMPISDAQTLL-LTGDTIGMIEVTTTNADTVMDTLGPLK 241

Query: 238 QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
           ++L   +   DW+     LF+A+ +E+  M ++LS+IV VA FNI++SL ++V  K  ++
Sbjct: 242 KELEGQAVVTDWKTINASLFEALAVERVAMFIVLSIIVLVAVFNILSSLIMLVRAKTRDI 301

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLL------ 351
           AIL+T G T + ++ +F+  G   G +G + G ALG +       ++  I  L       
Sbjct: 302 AILRTMGATRKSLLKIFVTIGFVIGALGTLSGLALGFVFLFFRQPIVNAIQYLTGQNLWD 361

Query: 352 ----DGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                   LP   +P+++  I L+A+  + L+TLYP+ +AA+T P + LRYE
Sbjct: 362 PSIRFLTELPSRSDPVEITTICLMALLFSFLATLYPALKAASTDPVQVLRYE 413



>gi|51473878|ref|YP_067635.1|   hypothetical protein RT0694 [Rickettsia typhi str. Wilmington]
 gi|51460190|gb|AAU04153.1|   conserved hypothetical protein [Rickettsia typhi str. Wilmington]
          Length = 415

 Score =  260 bits (665), Expect = 5e-68
 Identities = 120/412 (29%), Positives = 208/412 (50%), Gaps = 19/412 (4%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
            +  I LRY R +  ++F   +S  S +G+ +GV AL+ V+SVMNGF  EL  NI+GL  
Sbjct: 6   FSFNIALRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHLELTKNIIGLNG 65

Query: 65  QAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKD 123
             I++ + G+++  +++  T +K + +  V  I  G  +     + +  ++ GI      
Sbjct: 66  DIIINRQGGNIDNYEEIKTTLLKQNYIKHVTYIAHGQALALGKSNNSGVLIKGIKLNDLS 125

Query: 124 PLT--PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
                   VN    D   GK  + LGEQLAS LGV  G+++R++ P+ S  T  G IP  
Sbjct: 126 LRNGIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGEKLRLISPN-SVSTAFGSIPRS 184

Query: 182 RLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL---SQ 237
           + F +I  F +   + D   +L+ +  A   +     +I    +   +P +        Q
Sbjct: 185 KEFEIIAIFNSGMYDYDLTTILMPLTAAQNFLSL-GNDINSIEINSLDPDQAIQYSYKIQ 243

Query: 238 QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
             L       +W+    +   A+ +E+  M  +LSLI+ VAAFNII+SL ++V +K  ++
Sbjct: 244 SLLGPNLYVFNWQTLNSQFLSALSVERTAMFTILSLIITVAAFNIISSLFMLVKDKTSDI 303

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV-------- 349
           AIL+T G + +QIM++F+  G   G++G  LG  LG   +  +  +   +          
Sbjct: 304 AILRTMGASTKQIMIIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLEHITGTKIFE 363

Query: 350 --LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +    +LP  +    +I+I  +++ +  L+T+YPS+RA+  +P +ALRYE
Sbjct: 364 AAIYFLYSLPSKVRTDDIILITSLSIILCFLATIYPSYRASKLKPVDALRYE 415



>gi|15602427|ref|NP_245499.1|   hypothetical protein PM0562 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720828|gb|AAK02646.1|   unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 417

 Score =  260 bits (665), Expect = 5e-68
 Identities = 107/414 (25%), Positives = 207/414 (50%), Gaps = 22/414 (5%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
             FI  RY R +  +R    +S  S+IGI LGV  L+  LS MNGFEREL   IL ++P 
Sbjct: 4   PFFISWRYQRSKQKNRLVSLISAFSSIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63

Query: 66  AILSSEHG------SLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
             + +             Q L +T  + + ++ ++P  T   ++++   + V  + G++ 
Sbjct: 64  VEIMAYPNEKGTSSIKPWQPLVKTLAQHEQIDGISPYVTFTALVENGTKLKVVQVKGVEK 123

Query: 120 AQKDPLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           + +D ++     V  +   +   +  +ILG  +A  L V  GD + +++   ++   + +
Sbjct: 124 SAQDQVSALGQFVLDEGWKVFEQQSGLILGYGIARDLDVVAGDWVSLLISPPNEQNQLAQ 183

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS- 236
            P +    V G      ++D    L+ +  A  L+      + G  L + +P +V +L+ 
Sbjct: 184 -PIRHRIQVSGILRLEGQLDHSYALLPLTQAQTLLGISTDEVHGVELKVKQPFQVQTLTF 242

Query: 237 --QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
              Q  P+    Q W  + G +++ +++ +++M + + L++ VA FNII++L + V +KQ
Sbjct: 243 PMLQDYPQALYAQHWIHKFGYMYRDIQLIRSVMYIAMVLVIGVACFNIISTLIMAVKDKQ 302

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------ 348
           G++AI++T G   R I  +F+  G  AG+ G ++G  LG +LA  L +++  +       
Sbjct: 303 GDIAIMRTLGANNRFIKQIFIWYGLQAGMKGCLIGIFLGIILALNLTSIIQGVEYLLGRK 362

Query: 349 ----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRY 398
                +     LP  +    ++++   A+ ++LL++LYP+ RAA  QPA+ L +
Sbjct: 363 LLSDGIYFVDFLPSELHWQDILLVFCSALILSLLASLYPANRAAKLQPAQVLSH 416



>gi|52699287|ref|ZP_00340695.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rickettsia akari str.
           Hartford]
          Length = 415

 Score =  259 bits (663), Expect = 8e-68
 Identities = 120/412 (29%), Positives = 203/412 (49%), Gaps = 19/412 (4%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
               I  RY R +  ++F   +S  S +G+ +GV AL+ V+SVMNGF  EL  NI+GL  
Sbjct: 6   FIFNIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGLNG 65

Query: 65  QAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKD 123
             +++ +  S++  +++    +K D V  V  I  G  +     + +  ++ G+      
Sbjct: 66  DIVINRQGASIDNYEEIKTKLLKQDYVKHVTFIAHGQALALGKSNNSGVLVKGMKLKDLS 125

Query: 124 PLTPYLVNVKQTDLEP--GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
                  NV     +   GK  + LGEQLAS LGV  GD+IR++ P  S  T  G +P  
Sbjct: 126 LRNEIFKNVNFGSFDNFYGKNVIALGEQLASNLGVTVGDKIRLISP-HSVSTAFGSMPRS 184

Query: 182 RLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL---SQ 237
           + F VI  F +   + D   +L+ +  A   +     +I    +   +P K  +     Q
Sbjct: 185 KEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSL-GNDINLIEINSLDPDKALTYSYKIQ 243

Query: 238 QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
             L       +W+    +   A+ +E+  M  +LSLI+ VAAFNII+SL ++V +K  ++
Sbjct: 244 SLLGPNLYVFNWQTLNSQFLSALAVERTAMFTILSLIITVAAFNIISSLFMLVKDKTSDI 303

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG--------- 348
           AIL+T G + +QIM++F+  G   G++G  LG  LG   +  +  +   +          
Sbjct: 304 AILRTMGASTKQIMLIFIYNGMFIGLLGTTLGIILGVTFSYNIQTIKNYLERITGTKIFE 363

Query: 349 -VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +    +LP  +    +I+I  +++ +  L+T+YPS+RA+   P +ALRYE
Sbjct: 364 AAIYFLYSLPSKVRTEDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 415



>gi|45441568|ref|NP_993107.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis biovar Medievalis str. 91001]
 gi|22125681|ref|NP_669104.1|   putative kinase [Yersinia pestis KIM]
 gi|45436429|gb|AAS61984.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis biovar Medievalis str. 91001]
 gi|21958595|gb|AAM85355.1|   putative kinase [Yersinia pestis KIM]
 gi|16121896|ref|NP_405209.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis CO92]
 gi|15979666|emb|CAC90450.1|   lipoprotein releasing system, transmembrane protein [Yersinia
           pestis CO92]
 gi|25321148|pir||AG0198   lipoprotein releasing system, transmembrane protein [imported] -
           Yersinia pestis (strain CO92)
          Length = 416

 Score =  259 bits (663), Expect = 9e-68
 Identities = 110/411 (26%), Positives = 210/411 (51%), Gaps = 19/411 (4%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
            P++L IGLR+ RGR        +S +ST+GI LGV  L+  LS MNGFEREL+N IL +
Sbjct: 5   SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 64

Query: 63  MPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
           +P   ++  +   +   Q  +   K+ G+   AP      +++++  +    + G+DP  
Sbjct: 65  VPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENSTQLRAVQVKGVDPEA 124

Query: 122 KDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           +  L+    ++++   +  + G+  +ILG+ LA  LGV +GD + VM+P++     + + 
Sbjct: 125 EQHLSALPSFVLDNAWSHFKAGQQQIILGKGLADTLGVKQGDWLTVMIPNSDPEMKLLQ- 183

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P +    V G F  + ++D    LV + DA + +     ++TG  + +++    + L + 
Sbjct: 184 PKRIRLQVAGIFQLSGQLDHSLALVPLIDAQQYLDM-GDSVTGIAIKVNDVYNANQLVRN 242

Query: 239 KLP---EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
                        W    G +++ ++M + +M L + L++ VA+FNI+++L + V +K  
Sbjct: 243 AGEVSNAYVYISSWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIVSTLVMAVKDKSS 302

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM----------P 345
           ++A+L+T G     I  +F+  G  AG+IG+I GA +G +++ QL  ++           
Sbjct: 303 DIAVLRTLGAKDGLIRAIFIWYGLLAGLIGSISGAVIGVIVSLQLTTIIRGLEKMVGHQF 362

Query: 346 IIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           +   +     LP  +    V  +   A+ ++L+++ YP+ RA+   PA  L
Sbjct: 363 LSSDIYFIDFLPSELRWFDVACVLATALVLSLIASWYPARRASRIDPARVL 413



>gi|16129081|ref|NP_415636.1|   putative kinase [Escherichia coli K12]
 gi|1787362|gb|AAC74202.1|   putative kinase; transport protein of outer membrane lipoproteins
           (ABC superfamily, membrane) [Escherichia coli K12]
 gi|4062690|dbj|BAA35938.1|   Hypothetical protein HI1548 [Escherichia coli K12]
 gi|7449108|pir||C64856   probable permease ycfW - Escherichia coli (strain K-12)
 gi|12230915|sp|P75958|LOLE_ECOLI   Lipoprotein releasing system transmembrane protein lolE
          Length = 414

 Score =  259 bits (663), Expect = 9e-68
 Identities = 108/413 (26%), Positives = 210/413 (50%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  GLMPQAILSSE-HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P   + +      N Q+  +   K+ G+   AP      +++S  ++    + G++P
Sbjct: 61  AVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  L+    ++      + + G+  +I+G+ +A  L V +GD + +M+P+++    + 
Sbjct: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +   +V G    + ++D    ++ + DA + +     +++G  L + +    + L 
Sbjct: 181 Q-PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKLV 238

Query: 237 Q---QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           +   +        + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG----- 348
            G++A+L+T G     I  +F+  G  AG+ G++ G  +G +++ QL  ++  I      
Sbjct: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGH 358

Query: 349 -----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                 +     LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L
Sbjct: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411



>gi|51596762|ref|YP_070953.1|   ABC tranporter/lipoprotein releasing system, permease subunit lolE
           [Yersinia pseudotuberculosis IP 32953]
 gi|51590044|emb|CAH21678.1|   ABC tranporter/lipoprotein releasing system, permease subunit lolE
           [Yersinia pseudotuberculosis IP 32953]
          Length = 415

 Score =  259 bits (662), Expect = 1e-67
 Identities = 109/411 (26%), Positives = 210/411 (51%), Gaps = 19/411 (4%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
            P++L IGLR+ RGR        +S +ST+GI LGV  L+  LS MNGFEREL+N IL +
Sbjct: 4   SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 63

Query: 63  MPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
           +P   ++  +   +   Q  +   K+ G+   AP      +++++  +    + G+DP  
Sbjct: 64  VPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENSTQLRAVQVKGVDPEA 123

Query: 122 KDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           +  L+    ++++   +  + G+  +ILG+ LA  LGV +G+ + VM+P++     + + 
Sbjct: 124 EQHLSALPSFVLDNAWSHFKAGQQQIILGKGLADTLGVKQGNWLTVMIPNSDPEMKLLQ- 182

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P +    V G F  + ++D    LV + DA + +     ++TG  + +++    + L + 
Sbjct: 183 PKRIRLQVAGIFQLSGQLDHSLALVPLIDAQQYLDM-GDSVTGIAIKVNDVYNANQLVRN 241

Query: 239 KLP---EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
                        W    G +++ ++M + +M L + L++ VA+FNI+++L + V +K  
Sbjct: 242 AGEVSNAYVYISSWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIVSTLVMAVKDKSS 301

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM----------P 345
           ++A+L+T G     I  +F+  G  AG+IG+I GA +G +++ QL  ++           
Sbjct: 302 DIAVLRTLGAKDGLIRAIFIWYGLLAGLIGSISGAVIGVIVSLQLTTIIRGLEKMVGHQF 361

Query: 346 IIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           +   +     LP  +    V  +   A+ ++L+++ YP+ RA+   PA  L
Sbjct: 362 LSSDIYFIDFLPSELHWFDVACVLATALVLSLIASWYPARRASRIDPARVL 412



>gi|33601281|ref|NP_888841.1|   lipoprotein releasing system transmembrane protein [Bordetella
           bronchiseptica RB50]
 gi|33575716|emb|CAE32794.1|   lipoprotein releasing system transmembrane protein [Bordetella
           bronchiseptica RB50]
          Length = 410

 Score =  259 bits (661), Expect = 1e-67
 Identities = 135/399 (33%), Positives = 215/399 (53%), Gaps = 25/399 (6%)

Query: 22  FGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLN----- 76
           F  F++  S  GI LGV AL+ VLSVMNGF++E+++ +L ++P   L     +       
Sbjct: 14  FISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQ 73

Query: 77  PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTP---YLVNVK 133
            +Q  + A     V   AP      +L   +++    + GIDPA +  ++     +V+ K
Sbjct: 74  WRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIPRQMVSGK 133

Query: 134 QTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAAN 193
            +DL  G +  +LG  LA  LGV  GD + ++ P  S  +P G  P  R F V+G F++ 
Sbjct: 134 LSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGS-ISPAGFAPRMRQFTVVGIFSSG 192

Query: 194 -SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK---LPEGSKWQDW 249
             E D   + ++ EDA+++ R       G RL + +  +   ++ +    LP      DW
Sbjct: 193 HYEYDSTLVFIDDEDAAKVFRESGTA--GVRLRVADMQRAPEVAAELTKVLPPYVMAADW 250

Query: 250 RDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQ 309
                  F AV+ EK MM L+L+LIVAVAAFN+++SL + V +KQ ++AIL+T G  P +
Sbjct: 251 SRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGE 310

Query: 310 IMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL----------LDGAALPVA 359
           +  +F+VQGA  G++G +LG A G  +A  ++ ++P I  L             +ALP  
Sbjct: 311 VARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSD 370

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRY 398
            +   +I I L ++ ++LL+TLYPSWRA+  QPA+ LR+
Sbjct: 371 PQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRH 409



>gi|22959283|ref|ZP_00006937.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Rhodobacter sphaeroides
           2.4.1]
          Length = 428

 Score =  259 bits (661), Expect = 1e-67
 Identities = 119/423 (28%), Positives = 201/423 (47%), Gaps = 27/423 (6%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      I  RY+R R A+     ++W+S +GITL V AL+  LSV  GF  E  + ILG
Sbjct: 8   FAAFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLSVRAGFRAEFVDTILG 67

Query: 62  LMPQAILSSE----------HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAV 111
                 + S            G  +   +      + GV R AP+  G V+  +  + + 
Sbjct: 68  ANAHVTVYSAGRITETGQLIRGFEDYDPVAARVAAVPGVLRAAPVVKGQVMATANGASSG 127

Query: 112 GVMLGIDPAQKDPLTPYLVNVKQ-TDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSAS 170
             + G+  A    +    +  +   D+E     + LG  +A +LGV+ GD++R++ P   
Sbjct: 128 VEVFGMRQADLATIPRIGIGAEHVGDIERFDEGIALGSGVAQELGVSVGDRVRLISPDGV 187

Query: 171 QFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEP 229
           + T  G  P    + V+  F A   ++D   + + + +A        G      + +++P
Sbjct: 188 K-TAFGTSPRVSAYEVVYVFTAGRYDIDRTRVYMPLAEAQSYFNR-EGLADEIEVMVEDP 245

Query: 230 LKVDSLS---QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSL 286
             VD+++    Q   EGS    WRD  G   +A+ +E N+M ++LS++V +A+ NI++ L
Sbjct: 246 EAVDAMAPALMQAAGEGSMLWTWRDSAGSFLRALTIEDNVMFVILSILVLIASMNIVSGL 305

Query: 287 GLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPI 346
            ++V  K  ++ IL+T GLT   I+ VF + GAS G+IG   G ALG L    ++ +  +
Sbjct: 306 IMLVKNKGRDIGILRTMGLTEGSILRVFFLCGASTGLIGTAAGVALGCLFTIYIDPIFSL 365

Query: 347 IGVLLDG----------AALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           +  L  G           ALP  ++   V+    +++ ++   TL P+ RAA   P EAL
Sbjct: 366 VNYLSGGGVWDPSIRGIYALPAKLQWADVLSAVALSLGLSFFVTLIPARRAARMNPVEAL 425

Query: 397 RYE 399
           RYE
Sbjct: 426 RYE 428



>gi|33596665|ref|NP_884308.1|   lipoprotein releasing system transmembrane protein [Bordetella
           parapertussis 12822]
 gi|33573366|emb|CAE37350.1|   lipoprotein releasing system transmembrane protein [Bordetella
           parapertussis]
          Length = 410

 Score =  259 bits (661), Expect = 1e-67
 Identities = 135/399 (33%), Positives = 215/399 (53%), Gaps = 25/399 (6%)

Query: 22  FGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLN----- 76
           F  F++  S  GI LGV AL+ VLSVMNGF++E+++ +L ++P   L     +       
Sbjct: 14  FISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQ 73

Query: 77  PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTP---YLVNVK 133
            +Q  + A     V   AP      +L   +++    + GIDPA +  ++     +V+ K
Sbjct: 74  WRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSNIPRQMVSGK 133

Query: 134 QTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAAN 193
            +DL  G +  +LG  LA  LGV  GD + ++ P  S  +P G  P  R F V+G F++ 
Sbjct: 134 LSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGS-ISPAGFAPRMRQFTVVGIFSSG 192

Query: 194 -SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK---LPEGSKWQDW 249
             E D   + ++ EDA+++ R       G RL + +  +   ++ +    LP      DW
Sbjct: 193 HYEYDSTLVFIDDEDAAKVFRESGTA--GVRLRVADMQRAPEVAAELTKVLPPYVMAADW 250

Query: 250 RDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQ 309
                  F AV+ EK MM L+L+LIVAVAAFN+++SL + V +KQ ++AIL+T G  P +
Sbjct: 251 SRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGE 310

Query: 310 IMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL----------LDGAALPVA 359
           +  +F+VQGA  G++G +LG A G  +A  ++ ++P I  L             +ALP  
Sbjct: 311 VARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSD 370

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRY 398
            +   +I I L ++ ++LL+TLYPSWRA+  QPA+ LR+
Sbjct: 371 PQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRH 409



>gi|16126173|ref|NP_420737.1|   hypothetical protein CC1930 [Caulobacter crescentus CB15]
 gi|13423385|gb|AAK23905.1|   conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|25321135|pir||E87488   conserved hypothetical protein CC1930 [imported] - Caulobacter
           crescentus
          Length = 426

 Score =  259 bits (661), Expect = 2e-67
 Identities = 112/419 (26%), Positives = 195/419 (46%), Gaps = 23/419 (5%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
           +      +  RY+  +  +     +S +S   + L V AL+TV+SVMNGF  EL   ILG
Sbjct: 10  FSRWERSVARRYLFAKRKNGGVALISVISFSAVMLAVFALITVMSVMNGFRAELLGRILG 69

Query: 62  LMPQAILSSEHGSLNPQQ-LPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
                   S   +   +  +        GV + AP+     ++     V   ++ G+  +
Sbjct: 70  FNGHLYAQSPLINGPDRDTIIRRIKAAPGVIQAAPMVEAQAMVIGPTQVTGAIVRGVTTS 129

Query: 121 QKDPLTP---YLVNVKQTDLEPGKYN---VILGEQLASQLGVNRGDQIRVMVPSASQFTP 174
               ++     + N        G+Y    V++GE++A  LGV  GD I ++ PS    T 
Sbjct: 130 DLRHMSLISGNIKNGSMEGFGQGEYGGDIVLIGERMAQTLGVQPGDPITIISPSG-PATA 188

Query: 175 MGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD 233
            G    ++ + V G F+   S+ D   + + +E A          +    + +++P K  
Sbjct: 189 FGSSTREKNYIVGGVFSVGMSQFDEAFIYMPLEQAQLFFGRDT-TVDYVEIKVEDPDKAK 247

Query: 234 SLSQQKL---PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMV 290
            L Q        G+   DW D+    F A+++E+ +M L+L  IVA+A  NII+SL ++V
Sbjct: 248 ELKQAVEIASGPGALVNDWMDKNHSYFTALQVERKVMRLILFCIVAIATLNIISSLVMLV 307

Query: 291 MEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGV- 349
             K  ++AIL+T G +   ++ +F++ GAS G+ G + G ALG L  + +  +   +   
Sbjct: 308 KNKGKDIAILRTMGASQGAVLRIFLMAGASIGVAGTLCGLALGVLFCAYITPIQNFVEWA 367

Query: 350 ---------LLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                    +   + +P  I+  +V  I L + A+++L+TL P+ RA+   P EALRYE
Sbjct: 368 TGTSVFNADVYMLSHIPAKIDWREVGGIVLASAAMSILATLPPALRASRLDPVEALRYE 426



>gi|53729136|ref|ZP_00134109.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 390

 Score =  258 bits (659), Expect = 2e-67
 Identities = 173/393 (44%), Positives = 255/393 (64%), Gaps = 8/393 (2%)

Query: 7   LFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQA 66
           LFI  RY R ++ADRFGR V+ L++ GI LGVMALV VLSVMNG E   + N+L  +P A
Sbjct: 6   LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65

Query: 67  ILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLT 126
           I+  + G  +  Q           ++   I   +V++QS + +  G +LG++    DP+ 
Sbjct: 66  IVLPQEGHFDKNQSLSLPA---FASKSVAINKANVIIQSQQGINAGQLLGVENESDDPML 122

Query: 127 PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNV 186
                  +T L  G++NV++G +LA++L +  G++IR+M+   SQ+TPMGR+P QRLFNV
Sbjct: 123 IG--EDVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPMGRVPVQRLFNV 180

Query: 187 IGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPEGSKW 246
           +G + +N+E   Y +  N+ D  RL+R     + G RL+L +P +V  L+Q       K 
Sbjct: 181 VGIYHSNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELNQHFDANNYKI 240

Query: 247 QDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLT 306
            DWR++KGE FQAVRMEKNMMGLL+SLI+ VA  NI+TSL LMV++KQ E+AILQTQGLT
Sbjct: 241 SDWREQKGEFFQAVRMEKNMMGLLISLIIIVAISNIVTSLSLMVVDKQAEIAILQTQGLT 300

Query: 307 PRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVI 366
            RQ+  +F+ QGA  G+IG+ILG  +G ++   L+ ++ ++        LP  I P+QV 
Sbjct: 301 KRQVTQIFIFQGAIVGVIGSILGGIIGTVITLNLDEIVALLN---PNIHLPTLISPMQVA 357

Query: 367 VIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            I ++++ ++L+ TLYP++RAA  +PA+ALRYE
Sbjct: 358 TIIVISIVLSLVCTLYPAYRAAKIEPAQALRYE 390



>gi|24112523|ref|NP_707033.1|   putative kinase [Shigella flexneri 2a str. 301]
 gi|24051415|gb|AAN42740.1|   putative kinase [Shigella flexneri 2a str. 301]
 gi|30062651|ref|NP_836822.1|   putative kinase [Shigella flexneri 2a str. 2457T]
 gi|30040899|gb|AAP16629.1|   putative kinase [Shigella flexneri 2a str. 2457T]
          Length = 414

 Score =  257 bits (658), Expect = 3e-67
 Identities = 107/413 (25%), Positives = 211/413 (51%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  GLMPQAILSSEHGS-LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P   + + +    N Q+  +   K+ G+   AP      +++S  ++    + G++P
Sbjct: 61  AVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  L+    ++      + + G+  +I+G+ +A  L V +GD + +M+P+++    + 
Sbjct: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +   ++ G    + ++D    ++ + DA + +     +++G  L + +    + L 
Sbjct: 181 Q-PKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKLV 238

Query: 237 Q---QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           +   +        + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG----- 348
            G++A+L+T G     I  +F+  G  AG+ G++ G  +G +++ QL  ++  I      
Sbjct: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVVIGVVVSLQLTPIIEWIEKLIGH 358

Query: 349 -----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                 +     LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L
Sbjct: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411



>gi|15604541|ref|NP_221059.1|   hypothetical protein RP699 [Rickettsia prowazekii str. Madrid E]
 gi|3861235|emb|CAA15135.1|   unknown [Rickettsia prowazekii]
 gi|7449109|pir||E71676   hypothetical protein RP699 - Rickettsia prowazekii
          Length = 415

 Score =  257 bits (657), Expect = 4e-67
 Identities = 117/412 (28%), Positives = 207/412 (50%), Gaps = 19/412 (4%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
            +  I  RY R +  ++F   ++  S +G+ +GV AL+ V+SVMNGF  EL  NI+GL  
Sbjct: 6   FSFNIAFRYFRAKKNEKFVSIIAAFSLVGVMIGVAALIVVMSVMNGFHLELTKNIIGLNG 65

Query: 65  QAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKD 123
             +++ +  +++  +++  T +K D V  V  I  G  +     + +  ++ GI      
Sbjct: 66  DIVINRQGDNIDNYEEIKTTLLKQDYVKHVTYIAHGQALALGKSNNSGVLVKGIKLNDLS 125

Query: 124 PLT--PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
                   VN    D   GK  + LGEQLAS LGV  G+++R++ P+ S  T  G IP  
Sbjct: 126 LRNGIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGEKLRLISPN-SVSTAFGSIPRS 184

Query: 182 RLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL---SQ 237
           + F +I  F +   + D   +L+ +  A   +     +I    +   +P +  +     Q
Sbjct: 185 KEFQIIAIFNSGMYDYDLTTILMPLTAAQNFLSL-GNDINSIEINSLDPDQAITYSYKIQ 243

Query: 238 QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
             L       +W+    +   A+ +E+  M  +LSLI+ VAAFNII++L ++V +K  ++
Sbjct: 244 SLLGPNLYVFNWKTLNSQFLSALAVERTAMFTILSLIITVAAFNIISNLFMLVKDKTSDI 303

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG--------- 348
           AIL+T G + +QIM++F+  G   G++G  LG  LG   +  +  +   +          
Sbjct: 304 AILRTMGASTKQIMVIFIYNGMFIGLLGTTLGVILGVTFSYNIQTIKNYLERITGIKIFE 363

Query: 349 -VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +    +LP  ++   +I+I  +++ +  L+T+YPS+RA+   P +ALRYE
Sbjct: 364 AAIYFLYSLPSKVKTDDIILITSLSIILCFLATIYPSYRASKLNPVDALRYE 415



>gi|52425240|ref|YP_088377.1|   hypothetical protein MS1185 [Mannheimia succiniciproducens MBEL55E]
 gi|52307292|gb|AAU37792.1|   unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 413

 Score =  257 bits (657), Expect = 4e-67
 Identities = 103/408 (25%), Positives = 203/408 (49%), Gaps = 18/408 (4%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
             FI  RY R +  +R    ++  S+IGI LGV  L+  LS MNGFEREL N IL ++P 
Sbjct: 4   PFFISWRYQRTKQKNRLVSLIALFSSIGIALGVAVLILGLSAMNGFERELNNRILAVVPH 63

Query: 66  AILSSEHG--SLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKD 123
           + +++       + Q L    +    +  V+P  +   ++++   + V  + G+D    D
Sbjct: 64  SDITAYQDGRINDRQDLERRLMANSDIKAVSPYVSFTALVENGAKLKVVQVHGVDHKMLD 123

Query: 124 PLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
            ++     V          +  ++LG  +A  L V+ GD + +++   +    + + P++
Sbjct: 124 NVSSLGKFVLNNGWQQFAERGGLVLGSGIARDLDVSEGDWVTLLISQNTDGDQLSQ-PAR 182

Query: 182 RLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL- 240
               V G    + ++D    L+ +  A   + +    I+G  + + +P KV  L+   L 
Sbjct: 183 ERVQVTGILRLDGQLDHSYALIPLATAQEFLGFAKNEISGIEMKVADPFKVQQLNFANLN 242

Query: 241 --PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
             P+    Q W ++ G +++ +++ + +M + + L++ VA FNI+++L + V +K G++A
Sbjct: 243 DYPQMLNLQTWINKFGYMYRDIQLIRTVMYIAMVLVIGVACFNIVSTLIMAVKDKAGDIA 302

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG---------- 348
           I++T G     I  +F+  G  AG+ G ++G  LG +L+  L +++  +           
Sbjct: 303 IMRTLGANNGFIKRIFIWYGLQAGMKGCLIGIILGVILSLNLTSIIKAVESLLGHKLLSD 362

Query: 349 VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            +     LP  +    V+++ + A+ ++LL++LYP+ RAA  QPA+ L
Sbjct: 363 GIYFVDFLPSELHWQDVLLVLVAALMLSLLASLYPANRAAKLQPAQVL 410



>gi|12514668|gb|AAG55864.1|   putative kinase [Escherichia coli O157:H7 EDL933]
 gi|13360960|dbj|BAB34919.1|   putative kinase [Escherichia coli O157:H7]
 gi|25321143|pir||D85675   probable kinase ycfW [imported] - Escherichia coli (strain O157:H7,
           substrain EDL933)
 gi|25321134|pir||H90815   probable kinase [imported] - Escherichia coli (strain O157:H7,
           substrain RIMD 0509952)
 gi|15830750|ref|NP_309523.1|   putative kinase [Escherichia coli O157:H7]
 gi|15801235|ref|NP_287252.1|   putative kinase [Escherichia coli O157:H7 EDL933]
          Length = 414

 Score =  257 bits (657), Expect = 4e-67
 Identities = 107/413 (25%), Positives = 210/413 (50%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  GLMPQAILSSE-HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P   + +      N Q+  +   K+ G+   AP      +++S  ++    + G++P
Sbjct: 61  AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  L+    ++      + + G+  +I+G+ +A  L V +GD + +M+P+++    + 
Sbjct: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +   +V G    + ++D    ++ + DA + +     +++G  L + +    + L 
Sbjct: 181 Q-PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKLV 238

Query: 237 Q---QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           +   +        + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM--------- 344
            G++A+L+T G     I  +F+  G  AG+ G++ G  +G +++ QL  ++         
Sbjct: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIERIEKLIGH 358

Query: 345 -PIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             +   +     LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L
Sbjct: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411



>gi|26247262|ref|NP_753302.1|   Lipoprotein releasing system transmembrane protein lolE
           [Escherichia coli CFT073]
 gi|26107663|gb|AAN79862.1|   Lipoprotein releasing system transmembrane protein lolE
           [Escherichia coli CFT073]
          Length = 414

 Score =  257 bits (657), Expect = 4e-67
 Identities = 106/413 (25%), Positives = 210/413 (50%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  GLMPQAILSSE-HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P   + +      N Q+  +   K+ G+   AP      +++S  ++    + G++P
Sbjct: 61  AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  L+    ++      + + G+  +I+G+ +A  L V +GD + +M+P+++    + 
Sbjct: 121 QQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +   ++ G    + ++D    ++ + DA + +     +++G  L + +    + L 
Sbjct: 181 Q-PKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDM-GSSVSGIALKMTDVFNANKLV 238

Query: 237 Q---QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           +   +        + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDK 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG----- 348
            G++A+L+T G     I  +F+  G  AG+ G++ G  +G +++ +L  ++  I      
Sbjct: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVVIGVVVSLKLTPIIEWIEKLIGH 358

Query: 349 -----VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                 +     LP  +  L V  + + A+ ++LL++ YP+ RA+   PA  L
Sbjct: 359 QFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411



>gi|56460622|ref|YP_155903.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Idiomarina loihiensis L2TR]
 gi|56179632|gb|AAV82354.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Idiomarina loihiensis L2TR]
          Length = 411

 Score =  257 bits (657), Expect = 4e-67
 Identities = 115/408 (28%), Positives = 211/408 (51%), Gaps = 19/408 (4%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
           +A  I  R+ +G A   F  F+S  STIGI LG   L+  LS+MNGF + LQ  +L ++P
Sbjct: 3   LAWLIARRFRKGTAKQGFLSFISASSTIGIALGCAVLIAALSMMNGFNQVLQERLLAVVP 62

Query: 65  QAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKD 123
           Q   S+  G+L + Q++ E A +   V   AP     V++Q+  +     + G+   Q+ 
Sbjct: 63  QVEYSAVEGALEDWQEVAEIARQHPEVIAAAPGINSTVMVQTQSTFHGIQVRGVSAEQEQ 122

Query: 124 PLT--PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
            ++     V+ +       +  ++LG  LA +L +  GD + ++ P  S+     R P +
Sbjct: 123 NVSALSDYVSSEDWQRWQQEGGLLLGAGLADKLNLAVGDSVSLLTPEKSERGF--RSPER 180

Query: 182 RLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK-- 239
               V G F    ++D     V+++ A   + + +  ++  RL L +     +++++   
Sbjct: 181 VRLEVTGLFKFGGQIDYQNAYVSLQTAKNELSFASD-VSSVRLRLKDVFSAPAVAREIGN 239

Query: 240 -LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
            LPE     DW    G L++ + + + ++ L+L L++AVA FNI+++L + V +K+ ++A
Sbjct: 240 QLPELVYLDDWTRSHGHLYRDIELVRWVVYLVLILVMAVACFNIVSTLIMTVAKKRSQIA 299

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII----------G 348
           +L+T G+  + ++  F++QG   G+ G ++G A G LLA  L ++M  +           
Sbjct: 300 MLKTLGMKDKSLLQSFVLQGLMNGLYGVVIGCACGILLAQFLPDIMLTLESWFHFKVLSN 359

Query: 349 VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            +     +P       VI++A VA+ ++LL+T+YP+WRA   +PA AL
Sbjct: 360 DIYFVGEVPSEWAWGDVILVASVALLMSLLATIYPAWRAVKVEPARAL 407



>gi|37526702|ref|NP_930046.1|   Lipoprotein releasing system transmembrane protein lolE
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36786134|emb|CAE15186.1|   Lipoprotein releasing system transmembrane protein lolE
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 415

 Score =  257 bits (656), Expect = 6e-67
 Identities = 119/412 (28%), Positives = 201/412 (48%), Gaps = 19/412 (4%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
             P++L   LR+ RGR        +S +ST+GI LGV  L+  LS MNGFEREL+N IL 
Sbjct: 3   NLPLSLVTALRFSRGRRRGGMVSLISVISTLGIMLGVAVLIIGLSAMNGFERELRNRILS 62

Query: 62  LMPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           ++P   + + H      Q   E      GV   +P  T   +++   S+    + G+D A
Sbjct: 63  VVPHGEIYTVHQPFEQWQPALERVKNTTGVVAASPYITFTGLMEKGASLHAVQVRGVDLA 122

Query: 121 QKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            +  ++    ++ +    + + G   VILG+ +A+ L V +GD + VM+P+      + +
Sbjct: 123 TESQVSSLPQFVQDNVWQNFQAGHQQVILGQGVANALKVKQGDWLTVMIPNNDPEMKLLQ 182

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
            P +    V G F  +  +D    LV + DA + + Y  G ITG  + +D+    D   +
Sbjct: 183 -PKRIRLQVSGIFQLSGLLDHSLALVPLADAQQYLDYGQG-ITGIAIKVDDVFAADQRVR 240

Query: 238 QKLP---EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                  E      W    G ++  ++M +++M L + L++ VA FNI+++L + V +K 
Sbjct: 241 SAGEASQEYVYISSWIRNYGYMYHDIQMVRSIMYLAMILVIGVACFNIVSTLIMAVKDKS 300

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM---------- 344
            ++AIL+T G   RQI  VF+  G   G+ G+I GA  G L +  L  L+          
Sbjct: 301 SDIAILRTLGAKDRQIRAVFLWYGLLTGMTGSIAGAVAGVLASLNLTALIHGLEKLIGHQ 360

Query: 345 PIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            + G +     LP  +  + V+ +   A+ ++LL++ YP+ RA+   PA  L
Sbjct: 361 FLSGDVYFIDFLPSELHGMDVLYVLATALILSLLASWYPARRASRLDPARIL 412



>gi|24373812|ref|NP_717855.1|   lipoprotein releasing system transmembrane protein LolC, putative
           [Shewanella oneidensis MR-1]
 gi|24348207|gb|AAN55299.1|   lipoprotein releasing system transmembrane protein LolC, putative
           [Shewanella oneidensis MR-1]
          Length = 416

 Score =  256 bits (654), Expect = 9e-67
 Identities = 122/414 (29%), Positives = 212/414 (51%), Gaps = 19/414 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P+AL IG R+ R R ++ F  F+S+ ST GI LGV  L+ VLS MNGFEREL+  +L
Sbjct: 1   MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEQRLL 60

Query: 61  GLMPQA-ILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G++ QA ++       + + + +TA++++G+   AP      ++Q         ++GIDP
Sbjct: 61  GVISQADVVGVNEPIADWRAVEQTALQIEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT-PM 175
            Q+  ++    ++       L     +++LGE L  +LG+  GD + + V          
Sbjct: 121 EQEAKVSTLSQFMSPETWQSLSEDDNHIVLGESLLKKLGLEVGDTLALYVQDLDPEHAGS 180

Query: 176 GRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            R      F V G +    E++     + +  A+ ++    G +TG R+ + +  +  + 
Sbjct: 181 LRAAKSHRFVVSGVYRLGGELELTTAYIPMRYAANILNLHQG-VTGVRISVTQVFEAPAK 239

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
            ++    L +     DW   +G L+Q +++ + +M L+L L++ VA FNI+++L + V +
Sbjct: 240 IRELGYALNQSVYISDWTRTQGHLYQDIQLVRTIMYLVLVLVIGVACFNIVSTLVMAVRD 299

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL-- 350
           K  E+AIL T GL+   +M +FMVQGA  G++G  LG  +G   A  L+ +   I  L  
Sbjct: 300 KASEIAILMTMGLSRLSVMGIFMVQGALNGLVGCALGGVIGIATAINLSAIARDIEQLLG 359

Query: 351 --------LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                        LP  +    V ++   A  ++L++TLYP+W+A+   PA+AL
Sbjct: 360 IQLLSADVYFVDFLPSELHMADVSLVIATAFVMSLIATLYPAWKASRIGPAQAL 413



>gi|58581928|ref|YP_200944.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|58426522|gb|AAW75559.1|   lipoprotein releasing system transmembrane protein [Xanthomonas
           oryzae pv. oryzae KACC10331]
          Length = 416

 Score =  256 bits (654), Expect = 1e-66
 Identities = 146/417 (35%), Positives = 243/417 (58%), Gaps = 22/417 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M++P+ + IGLRY+R +  + F  F+S  S +GI LGV  L+T L+VM+GF++E+++ +L
Sbjct: 4   MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 63

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            +   A +S+E   + + Q   E A+    V   AP    + +LQ  R     ++ G+ P
Sbjct: 64  QMAAHATVSAEGAPMRDWQHAVEVAMSDPRVAGAAPYIETESLLQGPRK-QPAIVRGVIP 122

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
           A++  ++     +       L PG YN+++G++LA  LGV+ GD + V++   +Q TP+G
Sbjct: 123 AEEGKVSVLAKKMQQGSVDSLTPGSYNIVIGKELALWLGVDVGDSVVVLLSD-TQATPLG 181

Query: 177 RIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
            +P  + F V G F A   E+D    +VN++D +R++R     +TG RL L +  +   +
Sbjct: 182 AMPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRMDG--VTGVRLRLHDMDQAWPV 239

Query: 236 SQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           ++     L    +  DW      L+ +++MEK +MG+LLSLIVA+ AFN+++S  ++V +
Sbjct: 240 ARDLAVKLHGPYRVSDWTQENANLYHSLKMEKTVMGILLSLIVAMGAFNLVSSQVMLVTD 299

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL-- 350
           KQ ++AIL+T GL+P  +M VFMVQG+  G +G  +G   G +L   L  ++ +I  +  
Sbjct: 300 KQADIAILRTLGLSPGGVMQVFMVQGSLIGFMGTFMGVIGGIVLTLNLERILGVIEAIFS 359

Query: 351 --------LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                        LP  ++   V+VI +VA+ ++ L+TLYP+WRA+ TQPAEALRYE
Sbjct: 360 VKLLPEDVYYITGLPTDMQTQDVVVITVVALVMSFLATLYPAWRASRTQPAEALRYE 416



>gi|32030059|ref|ZP_00132979.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus somnus 2336]
 gi|23467307|ref|ZP_00122890.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus somnus 129PT]
          Length = 416

 Score =  255 bits (653), Expect = 1e-66
 Identities = 111/411 (27%), Positives = 207/411 (50%), Gaps = 21/411 (5%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
             FI  RY   R+ ++    ++  STIGI LGV  L+  LS MNGFEREL   IL ++P 
Sbjct: 4   PFFISWRYQYSRSKNKLVSLIALFSTIGIALGVAVLIVGLSAMNGFERELNQRILSVVPH 63

Query: 66  AILSSEHGSLN-----PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           + + S     N      Q++     +   V   +P      ++++   + V  + GI+  
Sbjct: 64  SEIISYQEQGNVKIESRQKITALLQQDPNVLAQSPFVEFTALIENGTKLKVAQVRGIEQV 123

Query: 121 QKDPLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
            +D ++     V             ++LG  +A +LGV+  D + +++  A+    + + 
Sbjct: 124 TQDQVSNLSKFVLNDGWQQFQKNGGLVLGYGIAKELGVSENDWVTLLISFANSDNQLSQ- 182

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P +    V G    + ++D    L+++  A  L+ Y    ITG  L + +P  V +++ +
Sbjct: 183 PLRYRIQVTGILRLDGQLDHSYALMSLSQAQVLLDYTPDEITGVELKVQDPFAVRNMTYE 242

Query: 239 KL---PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
            L   P+  + QDW  + G ++  +++ + +M + + L++ VA FNI+++L + V +KQ 
Sbjct: 243 YLYDYPQRLQVQDWIGKFGYMYNDIQLIRTVMYIAMVLVIGVACFNIVSTLIMAVKDKQA 302

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG------- 348
           ++AI++T G   R I  +F+  G  +G+ G ++G ALG +L+  L +L+  I        
Sbjct: 303 DIAIMRTLGANNRFIKQIFVWYGLQSGMKGCLVGIALGVILSLNLTDLIQFIEFLLDKKL 362

Query: 349 ---VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
               +     LP  +    V+++ +VA+ ++LL++LYP+ RAA  QPA+ L
Sbjct: 363 LSDGIYFIDFLPSELHWQDVLMVLVVALMLSLLASLYPASRAAKLQPAQVL 413



>gi|61100924|ref|ZP_00376381.1|   ABC-type transport system [Erythrobacter litoralis HTCC2594]
 gi|60736853|gb|EAL75111.1|   ABC-type transport system [Erythrobacter litoralis HTCC2594]
          Length = 415

 Score =  254 bits (650), Expect = 3e-66
 Identities = 111/412 (26%), Positives = 198/412 (48%), Gaps = 17/412 (4%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
            P    I  RY+     + F   V+ +S   + L V  LV V+SVMNGF  EL + I+G+
Sbjct: 6   SPFEWTIAKRYLLPGRGEAFIALVAGISVGVVMLSVAMLVIVMSVMNGFRAELLDKIVGV 65

Query: 63  MPQAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
              AI+ +  G L+  + + E      GV   +P+    +++     V    + G     
Sbjct: 66  NGHAIVQAYGGRLDNWESILEEVRDTPGVTEASPLIEQPLLVTFNGRVEAVFVRGNTQED 125

Query: 122 KDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQ 181
              L+  +V      L+P    V +G +LA  +G   GD + ++ P+    TP G +P Q
Sbjct: 126 IAELSDKVVLGNLQRLQPEASVVAIGARLAENIGARVGDVVTIINPAGRS-TPFGTVPRQ 184

Query: 182 RLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL---SQ 237
             + V   F     + D   M++ I DA  L+      I    +  ++   V  +    +
Sbjct: 185 VGYEVAAIFEVGLYDYDQAFMVMPIPDAQTLL-LTGDTIGMIEVKTEDADNVAEIMAPVE 243

Query: 238 QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
            KL   ++ + W+     +F+A+++E+  M   LS +V VAAFNI++SL ++V  K  ++
Sbjct: 244 AKLSGIAQVRTWQQINSSIFEALQVERVAMFFALSFMVLVAAFNILSSLVMLVRAKTRDI 303

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLL------ 351
           AI++T G T + ++ +F+  G + G IG   G  LG ++      ++ +I  +       
Sbjct: 304 AIMRTMGATRKSLLKIFVTTGFTVGAIGTFAGLLLGTIVLYFREPIVDVIAFVTGQELWD 363

Query: 352 ----DGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 + LP   +P+++I I ++A+ ++ L+TLYP+ +A+ T P + LRYE
Sbjct: 364 PEVRFLSTLPAKADPVEIIGIVVLALVLSFLATLYPALKASGTDPVQVLRYE 415



>gi|57238817|ref|YP_179953.1|   putative lipoprotein releasing system transmembrane protein LolE
           [Ehrlichia ruminantium str. Welgevonden]
 gi|58417372|emb|CAI26576.1|   Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
           ruminantium str. Welgevonden]
 gi|57160896|emb|CAH57801.1|   putative lipoprotein releasing system transmembrane protein LolE
           [Ehrlichia ruminantium str. Welgevonden]
 gi|58578746|ref|YP_196958.1|   Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 411

 Score =  254 bits (649), Expect = 4e-66
 Identities = 113/413 (27%), Positives = 208/413 (50%), Gaps = 16/413 (3%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M     L + LRY++   +      ++ LS IGITLGV  L+ V+SVMNGF  +L N I+
Sbjct: 1   MLFKFELMLALRYLQSNRSQFLCSMITMLSFIGITLGVATLIIVMSVMNGFGEKLLNCIV 60

Query: 61  GLMPQAILSSEHGS--LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
           G+  Q  +   +     N   + +    + GV    PIT    + +S +SV+  ++ GI 
Sbjct: 61  GVNGQVAIYFNNNEKDTNYHDVAKLIKDIPGVIDAIPITENQAMAKSEQSVSGIIVRGIS 120

Query: 119 PAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
                       N+ + ++      +++G +LA  L VN GD+I ++    S  T +G I
Sbjct: 121 KQDLLRKNIIADNIVRGNISDLDNGIVIGIKLAEILNVNYGDKITILSSD-SIPTVIGSI 179

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  + + VI  F     E D   + + +  +  L  Y    +    + +D+  +   + +
Sbjct: 180 PRMKSYKVIAVFDLGMYEYDSTLVYMPLHSSQLLFHY-GNRVHNIEVSIDDINRSSEILK 238

Query: 238 QKL-PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGE 296
                   K +DW+ ++G  F A+++E N+M  +L+LI+ VA FNII+SL ++V +K+G 
Sbjct: 239 LIEDKTSMKGEDWKMQQGSYFNALKVESNVMFFILTLIIIVATFNIISSLSILVQDKKGA 298

Query: 297 VAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL------ 350
           +AI++T G+T   I+ +F + G   G+IG ++G  LG + +  +N +  I+  +      
Sbjct: 299 IAIMRTLGVTRGSILRIFCMCGFFIGLIGTLVGCILGVVFSLNINGIKNILESISHNNIF 358

Query: 351 ----LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                    LP  +    ++ I+L+++ ++L++ + P+ +AA   PA+ LR+E
Sbjct: 359 DPIVYFFDTLPSILLVKDIVKISLLSLFLSLVAAILPARKAACQDPADILRHE 411



>gi|58416418|emb|CAI27531.1|   Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
           ruminantium str. Gardel]
 gi|58616806|ref|YP_196005.1|   Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
           ruminantium str. Gardel]
          Length = 411

 Score =  254 bits (648), Expect = 5e-66
 Identities = 112/413 (27%), Positives = 207/413 (50%), Gaps = 16/413 (3%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M     L + LRY++   +      ++ LS IGITLGV  L+ V+SVMNGF  +L N I+
Sbjct: 1   MLFKFELMLALRYLQSNRSQFLCSMITMLSFIGITLGVATLIIVMSVMNGFGEKLLNCIV 60

Query: 61  GLMPQAILSSEHGS--LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
           G+  Q  +   +     N   + +    + GV    PIT    + +S +SV+  ++ GI 
Sbjct: 61  GVNGQVAIYFNNNEKDTNYHDVAKLIKDIPGVIDAIPITENQAMAKSEQSVSGIIVRGIS 120

Query: 119 PAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
                       N+ + ++      +++G +LA  L VN GD+I ++    S  T +G I
Sbjct: 121 KQDLLRKNIIADNIVRGNISDLDNGIVIGIKLAEILNVNYGDKITILSSD-SIPTVIGSI 179

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P  + + VI  F     E D   + + +  +     Y    +    + +D+  +   + +
Sbjct: 180 PRMKSYKVIAVFDLGMYEYDSTLVYMPLHSSQLFFHY-GNRVHNIEVSIDDINRSSEILK 238

Query: 238 QKL-PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGE 296
                   K +DW+ ++G  F A+++E N+M  +L+LI+ VA FNII+SL ++V +K+G 
Sbjct: 239 LIEDKTSMKGEDWKMQQGSYFNALKVESNVMFFILTLIIIVATFNIISSLSILVQDKKGA 298

Query: 297 VAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL------ 350
           +AI++T G+T   I+ +F + G   G+IG ++G  LG + +  +N +  I+  +      
Sbjct: 299 IAIMRTLGVTRGSILRIFCMCGFFIGLIGTLVGCILGVVFSLNINGIKNILESISHNNIF 358

Query: 351 ----LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                    LP  +    ++ I+L+++ ++L++ + P+ +AA   PA+ LR+E
Sbjct: 359 DPIVYFFDTLPSILLVKDIVKISLLSLFLSLVAAILPARKAACQDPADILRHE 411



>gi|37680545|ref|NP_935154.1|   putative ABC transporter, integral membrane protein [Vibrio
           vulnificus YJ016]
 gi|37199293|dbj|BAC95125.1|   putative ABC transporter, integral membrane protein [Vibrio
           vulnificus YJ016]
          Length = 414

 Score =  252 bits (644), Expect = 1e-65
 Identities = 111/413 (26%), Positives = 216/413 (52%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+  +AL IG R+ + +  ++   F+S  STIGI +GV  ++  LS MNGFERELQ+ +L
Sbjct: 1   MFSSLALLIGRRFSQAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P A L      + N Q +   AV    V   AP      +++    +    + G++P
Sbjct: 61  SVIPHAELEGVRAPVENWQSVMTQAVANPKVVAAAPYVKFTGLVERGNKLKAVEVRGVEP 120

Query: 120 AQKDPLTPY---LVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
             +  ++     +     +   PG+  VI+G  +A++LGV+ GD + +++P   + T + 
Sbjct: 121 DFEQAVSTMSQFIDQQAWSQFLPGQNQVIVGRGVANELGVDVGDYVTLLIPQTGESTKV- 179

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +    V G    N ++D   +L+ + DA +      G +TG  L  ++ L   ++ 
Sbjct: 180 QAPKRVRVKVTGMLTLNGQIDHNLVLLPMADAQQYNHLGEG-VTGIALKTNDVLNAQAIV 238

Query: 237 QQKLPEG---SKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           ++   +       + W+ + G L++ +++ + +M L++ L++ VA FNI+++L + V ++
Sbjct: 239 REVGRQIDVYVYLRSWQQQFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDR 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM--------- 344
             E+AIL+T G     I  +F+ QG  +G++G++LG+ +G L+A  L  L+         
Sbjct: 299 ASEIAILRTMGAGDGLIKRIFVWQGVFSGVLGSVLGSVVGVLVALNLTTLIKGLERVIGH 358

Query: 345 -PIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             + G +     LP  +    V++++  A+ +++++T YP+ RAA  +PA  L
Sbjct: 359 QFLSGDIYFVDFLPSQLRLDDVLLVSGTAIVLSIVATWYPAARAAKLKPAAVL 411



>gi|52008723|ref|ZP_00336092.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Silicibacter sp. TM1040]
          Length = 415

 Score =  252 bits (643), Expect = 2e-65
 Identities = 113/417 (27%), Positives = 191/417 (45%), Gaps = 27/417 (6%)

Query: 8   FIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI 67
            I  RY+R R ++     ++W+S IGITL V AL+  L+V +GF  E    ILG    A 
Sbjct: 1   MIAWRYLRARRSEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSEFVGTILGANAHAT 60

Query: 68  LSSE----------HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGI 117
           + +               +   L E   ++ GV + AP+  G V+       A   + GI
Sbjct: 61  VYAHGTVTAAGTLDRRITDYAALAEAVGQVPGVLQAAPLIKGQVMASRGDRNAGVQVYGI 120

Query: 118 DPAQKDPLT-PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
                  +      +V   DL      + LG  +A  LG+  GD+++++ P+  + T  G
Sbjct: 121 HAEDLAKIPGVAQSDVAYGDLGRFDDGIALGSGVARTLGLGIGDKVKLISPNGVK-TAFG 179

Query: 177 RIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
             P    + V+  F A   ++D     +   +A        G      + + +P  VD  
Sbjct: 180 TSPRVNAYEVVYVFTAGRYDIDNTRAYLPFAEAQSYFNR-EGVADEIEVMVADPEAVDQY 238

Query: 236 SQQKL---PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
               L    +G     WRD  G   +A+ +E N+M ++LS++V +A  NI++ L ++V  
Sbjct: 239 VLPLLQAAGQGYGVWSWRDSSGGFLRALEVEDNVMFVILSILVLIATMNIVSGLIMLVKN 298

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLD 352
           K  ++ IL+T GL+   +M VF + G+  G+IG +LG  LG L A  ++ +   +  ++ 
Sbjct: 299 KGRDIGILRTIGLSEGSVMRVFFICGSITGVIGTVLGVILGCLFAIYIDPIFSFVNYVMG 358

Query: 353 G----------AALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           G           ALP  +    VI    +++ ++ + T++P+ RAA   P EALRYE
Sbjct: 359 GGVWDPSIRGIYALPAELRAGDVISAVSLSLGLSFVVTIFPARRAARLNPVEALRYE 415



>gi|48862035|ref|ZP_00315933.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Microbulbifer degradans
           2-40]
          Length = 381

 Score =  251 bits (642), Expect = 2e-65
 Identities = 130/381 (34%), Positives = 211/381 (55%), Gaps = 18/381 (4%)

Query: 34  ITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRV 93
           + LGV A++ VLSVMNGF+REL+  IL ++P   L++E      + L E       +   
Sbjct: 1   MALGVFAIIVVLSVMNGFDRELKERILRVVPHGFLTTEKPLTQWRALSEQIQHQPHLLAS 60

Query: 94  APITTGDVVLQSARSVAVGVMLGIDPAQKDPLT---PYLVNVKQTDLEPGKYNVILGEQL 150
           AP   G  ++     V    + GIDP  +  ++    +++    +DL+ G+Y ++LG  +
Sbjct: 61  APYIDGTGLVSYGGGVRPVEIQGIDPDYERNISLVDDFMLVGALSDLQAGEYQIVLGNLI 120

Query: 151 ASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASR 210
           A  LG+  GD + V +P  S  TP G  P  + F +IG F   ++VD    L++I+DA +
Sbjct: 121 ARNLGLAIGDTVAVTLPQVS-ITPAGVFPRSKRFTLIGVFEVGAQVDQSLALIHIDDAKK 179

Query: 211 LMRYPAGNITGWRLWLDEPLKVDSLSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMM 267
           L R    ++ G  L  D+     +   +    L EG   +DW   +G LFQAV+MEK ++
Sbjct: 180 LFRM-GDSVAGLHLKYDDIYSAPAEISKLKASLGEGYTTKDWSQTQGSLFQAVKMEKTVV 238

Query: 268 GLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAI 327
            ++LS+I+AVAAFNI+TSL +MV+EK+ ++A+L+T GLT   I+ +FMVQG + G++G  
Sbjct: 239 AIMLSIIIAVAAFNIVTSLIMMVVEKRSDIAVLRTLGLTRFGIIQIFMVQGITMGVVGIA 298

Query: 328 LGAALGALLASQLNNLMP----------IIGVLLDGAALPVAIEPLQVIVIALVAMAIAL 377
            GA  G  +A  L  ++               +   + LP        I +  +A+ +++
Sbjct: 299 FGALFGMGVAIYLPQMIAGLEGATGWQLFDPAVYFVSFLPSQWRAEDTIFVCSMAILMSI 358

Query: 378 LSTLYPSWRAAATQPAEALRY 398
           ++T+YP+WRA+  +PAEALRY
Sbjct: 359 VATIYPAWRASKIEPAEALRY 379



>gi|27361562|gb|AAO10470.1|   Conserved hypothetical protein [Vibrio vulnificus CMCP6]
 gi|27365415|ref|NP_760943.1|   hypothetical protein VV12082 [Vibrio vulnificus CMCP6]
          Length = 414

 Score =  251 bits (642), Expect = 2e-65
 Identities = 111/413 (26%), Positives = 216/413 (52%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+  +AL IG R+ + +  ++   F+S  STIGI +GV  ++  LS MNGFERELQ+ +L
Sbjct: 1   MFSSLALLIGRRFSQAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60

Query: 61  GLMPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P A L      + N Q +   AV    V   AP      +++    +    + G++P
Sbjct: 61  SVIPHAELEGVRAPVENWQSVMTQAVANPKVVAAAPYVKFTGLVERGNKLKAVEVRGVEP 120

Query: 120 AQKDPLTPY---LVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
             +  ++     +     +   PG+  VI+G  +A++LGV+ GD + +++P   + T + 
Sbjct: 121 DFEQAVSTMSQFIDQQAWSQFLPGQNQVIVGRGVANELGVDVGDYVTLLIPQTGESTKV- 179

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +    V G    N ++D   +L+ + DA +      G +TG  L  ++ L   ++ 
Sbjct: 180 QAPKRVRVKVTGMLTLNGQIDHNLVLLPMADAQQYNHLGEG-VTGIALKTNDVLNAQAIV 238

Query: 237 QQKLPEG---SKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           ++   +       + W+ + G L++ +++ + +M L++ L++ VA FNI+++L + V ++
Sbjct: 239 REVGRQIDVYVYLRSWQQQFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDR 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLM--------- 344
             E+AIL+T G     I  +F+ QG  +G++G++LG+ +G L+A  L  L+         
Sbjct: 299 ASEIAILRTMGAGDGLIKRIFVWQGVFSGVLGSVLGSVVGVLVALNLTTLIKGLERVIGH 358

Query: 345 -PIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             + G +     LP  +    V++++  A+ +++++T YP+ RAA  +PA  L
Sbjct: 359 QFLSGDIYFVDFLPSQLRVDDVLLVSGTAIVLSIVATWYPAARAAKLKPAAVL 411



>gi|51245480|ref|YP_065364.1|   similar to lipoprotein releasing system transmembrane protein
           (LolC) [Desulfotalea psychrophila LSv54]
 gi|50876517|emb|CAG36357.1|   related to lipoprotein releasing system transmembrane protein
           (LolC) [Desulfotalea psychrophila LSv54]
          Length = 410

 Score =  249 bits (635), Expect = 1e-64
 Identities = 125/408 (30%), Positives = 200/408 (49%), Gaps = 18/408 (4%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
              FI LRY+R +   RF   +S +S  GIT+GV+AL+ V++V +GF   L++ ILG+  
Sbjct: 4   YEWFISLRYLRAKHKQRFISLISLISIAGITVGVIALIVVMAVYSGFTTSLRDQILGVNA 63

Query: 65  QAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSA-RSVAVGVMLGIDPAQK 122
             I+  + G + +   + +  + L  V    P      +L S     +  V+ GIDP   
Sbjct: 64  HIIVQQQGGKMYDYLNVRKEIIALPNVRGATPYLYAQTLLSSPRGGGSGVVLRGIDPTTA 123

Query: 123 ---DPLTPYLVNVKQTDLEPGK---YNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
                L   ++  K  +L        N+I+G+ LA  L V +GD++R++ PS    TPMG
Sbjct: 124 VGVLGLPEQMIAGKVDNLTDKTTRVPNIIIGKNLAKNLRVGQGDKVRLISPSG-PLTPMG 182

Query: 177 RIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRL-----WLDEPL 230
            IP      V G F     E D     ++I +    +        G  +      LD   
Sbjct: 183 VIPKITTCQVSGIFETGMYEYDSTLAYMSIANTQNFLA-SGDLAHGIEVTVDHNKLDSAD 241

Query: 231 KVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMV 290
           ++ +  ++ L      +DW      LF A ++EK  M + ++LI+ VAA NI+++L ++V
Sbjct: 242 QIAATIRKSLGSLYVVRDWMQMNQNLFAAFKLEKIGMFICMALIILVAALNIVSALIMVV 301

Query: 291 MEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN--NLMPIIG 348
           MEK  ++AIL++ G T   IM +F  QG     +G  LG A G  L   L+    + +  
Sbjct: 302 MEKTKDIAILKSMGATSSSIMRIFFFQGLVIAFLGTGLGVAGGLGLCQLLSRYKFIELPA 361

Query: 349 VLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            +     LP+ + P  VI++A  ++ I LL+TLYPSW+AA  +P E L
Sbjct: 362 NVYPMTTLPIQVIPSDVIIVAACSIIITLLATLYPSWKAAQVRPGEVL 409



>gi|29142135|ref|NP_805477.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 gi|16760094|ref|NP_455711.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29137764|gb|AAO69326.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi Ty2]
 gi|16502388|emb|CAD08343.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|25321155|pir||AD0645   ABC transporter integral membrane chain STY1259 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
          Length = 414

 Score =  248 bits (633), Expect = 2e-64
 Identities = 114/413 (27%), Positives = 217/413 (52%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  GLMPQAILSSEHGS-LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P   + + +    N ++      K+ G+   AP      +++S  ++    + G+DP
Sbjct: 61  AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  L+    ++ N      + G+  +I+G+ +A  L V +GD + +M+P+A+    + 
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +   +VIG    + ++D    ++ +EDA + +     +++G  L + +    + L 
Sbjct: 181 Q-PKRVRLHVIGILQLSGQLDHSFAMIPLEDAQQYLDM-GSSVSGIALKVHDVFNANKLV 238

Query: 237 Q---QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           +   +        + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMILVIGVACFNIVSTLVMAVKDK 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------ 347
            G++A+L+T G     I  +F+  G  AG++G+++G A+G +++ QL  ++  I      
Sbjct: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLIGVAIGVVVSLQLTAIINGIEKEIGH 358

Query: 348 ----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
               G +     LP  +  L V+ + + A+ ++LL++ YP+ RA+   PA  L
Sbjct: 359 QFLSGDIYFIDFLPSELHWLDVVYVLVTALLLSLLASWYPARRASNIDPARVL 411



>gi|56413795|ref|YP_150870.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
 gi|56128052|gb|AAV77558.1|   ABC transporter integral membrane subunit [Salmonella enterica
           subsp. enterica serovar Paratypi A str. ATCC 9150]
          Length = 414

 Score =  247 bits (631), Expect = 5e-64
 Identities = 114/413 (27%), Positives = 216/413 (52%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  GLMPQAILSSEHGS-LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P   + + +    N ++      K+ G+   AP      +++S  ++    + G+DP
Sbjct: 61  AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  L+    ++ N      + G+  +I+G+ +A  L V +GD + +M+P+A+    + 
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +   +VIG    + ++D    ++ +EDA + +      ++G  L + +    + L 
Sbjct: 181 Q-PKRVRLHVIGILQLSGQLDHSFAMIPLEDAQQYLDM-GSRVSGIALKVHDVFNANKLV 238

Query: 237 Q---QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           +   +        + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMILVIGVACFNIVSTLVMAVKDK 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------ 347
            G++A+L+T G     I  +F+  G  AG++G+++G A+G +++ QL  ++  I      
Sbjct: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLIGVAIGVVVSLQLTAIINGIEKAIGH 358

Query: 348 ----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
               G +     LP  +  L V+ + + A+ ++LL++ YP+ RA+   PA  L
Sbjct: 359 QFLSGDIYFIDFLPSELHWLDVVYVLVTALLLSLLASWYPARRASNIDPARVL 411



>gi|62127372|gb|AAX65075.1|   ABC transporter, integral membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|16419737|gb|AAL20148.1|   integral membrane protein ABC transporter [Salmonella typhimurium
           LT2]
 gi|16764574|ref|NP_460189.1|   integral membrane protein [Salmonella typhimurium LT2]
          Length = 414

 Score =  247 bits (631), Expect = 5e-64
 Identities = 114/413 (27%), Positives = 217/413 (52%), Gaps = 19/413 (4%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P++L IGLR+ RGR        +S +STIGI LGV  L+  LS MNGFEREL N IL
Sbjct: 1   MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60

Query: 61  GLMPQAILSSEHGS-LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            ++P   + + +    N ++      K+ G+   AP      +++S  ++    + G+DP
Sbjct: 61  AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120

Query: 120 AQKDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
            Q+  L+    ++ N      + G+  +I+G+ +A  L V +GD + +M+P+A+    + 
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
           + P +   +VIG    + ++D    ++ +EDA + +     +++G  L + +    + L 
Sbjct: 181 Q-PKRVRLHVIGILQLSGQLDHSFAMIPLEDAQQYLDM-GSSVSGIALKVHDVFNANKLV 238

Query: 237 Q---QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
           +   +        + W    G +++ ++M + +M L + L++ VA FNI+++L + V +K
Sbjct: 239 RDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMILVIGVACFNIVSTLVMAVKDK 298

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII------ 347
            G++A+L+T G     I  +F+  G  AG++G+++G A+G +++ QL  ++  I      
Sbjct: 299 SGDIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLIGVAIGVVVSLQLTAIINGIEKAIGH 358

Query: 348 ----GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
               G +     LP  +  L V+ + + A+ ++LL++ YP+ RA+   PA  L
Sbjct: 359 QFLSGDIYFIDFLPSELHWLDVVYVLVTALLLSLLASWYPARRASNIDPARVL 411



>gi|40063595|gb|AAR38384.1|   ABC transporter, permease protein [uncultured bacterium 582]
          Length = 415

 Score =  247 bits (630), Expect = 6e-64
 Identities = 110/417 (26%), Positives = 190/417 (45%), Gaps = 27/417 (6%)

Query: 8   FIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI 67
            I  RY+R + A+     ++W+S IGITL V AL+  LSV +GF  E  + ILG    A 
Sbjct: 1   MIAWRYLRSKRAEGGVSVMTWISLIGITLAVFALIATLSVRSGFRAEFVDTILGANAHAT 60

Query: 68  L----------SSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGI 117
           +            +        +     ++ GV+RVAP+  G V+       A   + GI
Sbjct: 61  VYQGATVNENGQMDRSISEYDTIAARLRQVPGVSRVAPLIKGQVMATRLGRNAGVEVFGI 120

Query: 118 DPAQKDPLTPYLVNVKQ-TDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
                  L           D+   +  V +G  +A +LGV  GD+I++M P   + T  G
Sbjct: 121 SFENLLTLPRIARPESYAGDINRFQSGVAIGSGVARELGVIVGDKIKLMSPDGVK-TAFG 179

Query: 177 RIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL 235
             P  + + V   F A   ++D   + +    A        G    + + + +P  VD L
Sbjct: 180 TSPRIKSYVVGYIFTAGRYDIDRTRIYMPFAAAQSFFN-SEGTADEFEVMVADPEAVDVL 238

Query: 236 S---QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
               Q    + +    WR       +A+ +E N+M +++S++V +AA NI++ L ++V  
Sbjct: 239 LPALQAAAGDNALVWTWRQASSSFLKALTIEDNVMFIIMSILVLIAAMNIVSGLIMLVKN 298

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLD 352
           K  ++ IL+T GL+   +M +F + GAS G++G + G  LG      ++ +   +  L  
Sbjct: 299 KGRDIGILRTMGLSEGSVMRIFFICGASTGLLGTLCGVLLGVAFTLYIDTIFSAVNYLAG 358

Query: 353 G----------AALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           G            +P  ++   VI    ++++++ + T++P+ RAA   P EALRYE
Sbjct: 359 GGVWDPSIRGLYNVPAKLQLGDVITAIGLSLSLSFVVTIFPARRAARLNPVEALRYE 415



>gi|33148228|gb|AAP95748.1|   lipoprotein releasing system transmembrane protein [Haemophilus
           ducreyi 35000HP]
 gi|33152006|ref|NP_873359.1|   lipoprotein releasing system transmembrane protein [Haemophilus
           ducreyi 35000HP]
          Length = 390

 Score =  246 bits (629), Expect = 8e-64
 Identities = 177/394 (44%), Positives = 257/394 (65%), Gaps = 8/394 (2%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           +LFI +RY R ++ADRFGR V+ L+++GI LGVMAL+TVLSVMNG E   + N+L  +P 
Sbjct: 5   SLFIAVRYWRSKSADRFGRLVTNLASLGIILGVMALITVLSVMNGLENMQKRNLLSALPH 64

Query: 66  AILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPL 125
           AI+S  +G     Q  +       V +   I   +V++QS +++  G ++G++ A  DPL
Sbjct: 65  AIVSPVNGYFEKTQTLDLPA---FVTQSVAINQTNVIIQSQQAINAGQLIGVEQASDDPL 121

Query: 126 TPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFN 185
                   +  L  G++NV++G +LA +L ++ G++IR+M+   SQ+TPMGR+P QRLF 
Sbjct: 122 LTDHD--IEHLLPSGRFNVLIGSRLAHKLNIHPGEKIRLMITENSQYTPMGRVPVQRLFT 179

Query: 186 VIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPEGSK 245
           V G + A+ E   Y +  N+ D  RL+R     + G RL+L +P  V  L+    P   K
Sbjct: 180 VAGLYFADHESSEYTLFANLADVGRLLRIDPEQLQGKRLYLQDPFMVTELATFFSPTQYK 239

Query: 246 WQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGL 305
             DWR++KGE FQAVRMEKNMM LL+SLI+ VA  NI+TSL LMV++KQ E+AILQTQGL
Sbjct: 240 ISDWREQKGEFFQAVRMEKNMMSLLISLIILVAISNIVTSLSLMVVDKQAEIAILQTQGL 299

Query: 306 TPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQV 365
           T RQ+M +F+ QGA  G+IG+I+G  +G +L   LN L+ +         LP+ I PLQ+
Sbjct: 300 TKRQVMHIFIFQGAIVGVIGSIIGGIIGVILTLNLNTLVGLFN---PTIHLPILIAPLQI 356

Query: 366 IVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           ++I L ++ ++LL TLYP++RA   +PA+ALRYE
Sbjct: 357 LIIVLSSVLLSLLCTLYPAYRATKIEPAQALRYE 390



>gi|33148230|gb|AAP95750.1|   lipoprotein releasing system transmembrane protein [Haemophilus
           ducreyi 35000HP]
 gi|33152008|ref|NP_873361.1|   lipoprotein releasing system transmembrane protein [Haemophilus
           ducreyi 35000HP]
          Length = 416

 Score =  242 bits (618), Expect = 2e-62
 Identities = 117/411 (28%), Positives = 202/411 (49%), Gaps = 21/411 (5%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
             FI  RY RG+  +R    +S  S+IGI LGV  L+  LS MNGFEREL   +L ++P 
Sbjct: 4   PFFISWRYQRGKQKNRLISLISLFSSIGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63

Query: 66  AILSSEHGSLNP-----QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
           A L   +   N      ++L E A +   V  +AP  +   ++++ R + +  + GID  
Sbjct: 64  AELRVFNEVENSPIYAGEKLAELAKRNQDVIALAPFVSFTGLIENGRQLKIAQVRGIDAT 123

Query: 121 QKDPLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           ++D ++     V  +Q      +  +ILG  +A  L V  GD + +++P  S    + + 
Sbjct: 124 KQDQVSSLSQYVASQQWQAFQQQGGLILGAGIAKALNVTVGDDVTLLLPQTSGENKLAQ- 182

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           P +    + G      ++D    L+ +  A +L+ Y     TG +L L +P     L   
Sbjct: 183 PLRFNLPISGILRLEGQLDHSYALLPLAKAQQLLDYQPTEYTGIQLALKQPFNAQRLQLP 242

Query: 239 KL---PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
           +L    +      W D+ G ++  +++ + +M + + L++ VA FNII++L +MV +KQG
Sbjct: 243 ELAEFEQPLYLATWIDKFGYMYNDIQLIRTVMYIAMVLVIGVACFNIISTLIMMVKDKQG 302

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL----- 350
           ++AIL+T G   R I  VF+  G  +G+ GA+ G  LG LL+ +L  ++  +        
Sbjct: 303 DIAILRTLGANSRFIKQVFLWYGLLSGMKGALFGLVLGVLLSLKLTAIIQTLEHFLGTKL 362

Query: 351 -----LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                     LP  +    V  +    + ++L+++LYP+ RAA   PA+ L
Sbjct: 363 LSDGVYFIDFLPSELHWQDVCCVLFATVILSLVASLYPATRAAKLAPAKVL 413



>gi|56542929|gb|AAV89083.1|   ABC-type transport system [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56551355|ref|YP_162194.1|   ABC-type transport system [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 416

 Score =  242 bits (617), Expect = 2e-62
 Identities = 121/415 (29%), Positives = 204/415 (49%), Gaps = 20/415 (4%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
                 I  RY+     + F   V+ +S   +TLGV AL+ V+SVMNGF  EL + I+G+
Sbjct: 4   SAYERIIARRYLLPGKGEAFIFLVASISLFAVTLGVAALIIVMSVMNGFRAELFDKIVGI 63

Query: 63  MPQAILSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGI---D 118
              A++   +G L N + + E   K  GV    P+    ++   A  V   ++ G+   D
Sbjct: 64  NGHAVIQGYNGELANWRPILEATRKTPGVTSAIPLIEQPLMATHAGRVEGVLLRGMALND 123

Query: 119 PAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
               + +   +      +L+ G  NVI+G +LA QLG++ GD I ++ P+  Q TP G +
Sbjct: 124 VNNNNLIRSNIREGHLNELKAGSNNVIIGIRLAEQLGIHAGDDISLISPAG-QTTPFGTV 182

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P    + V   F     + D   +++ + DA  L+      +    +  +   +V  +  
Sbjct: 183 PRIVSYRVAAIFEVGVYDYDKAFVIMPLSDAQTLL-MMNDTVGIIEIKTNNADRVGQILD 241

Query: 238 QKLPEGSKW---QDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                 +     QDWR+    LFQA+ +E+ +M  +L+LI+ VAAFNI++SL ++V  K 
Sbjct: 242 PLKDRVANVGVLQDWRNMNASLFQALSVERVVMFWILALIILVAAFNILSSLIMLVRAKN 301

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLD-- 352
            ++AIL+T G +   ++ +FM  G + G +G + G  L  ++      L+  I       
Sbjct: 302 RDIAILRTMGASRIAMLKIFMAVGLAIGSLGTLAGVILAFVILYFRQPLVNAIQYFSGQN 361

Query: 353 --------GAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                      LP  ++P++VI I  +++  + L TLYP+W+AA+T P E LRYE
Sbjct: 362 LWDPSIRIITELPARVDPIEVIGIIALSIGSSFLFTLYPAWKAASTDPVEVLRYE 416



>gi|46204233|ref|ZP_00050294.2|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 386

 Score =  241 bits (615), Expect = 3e-62
 Identities = 112/387 (28%), Positives = 183/387 (47%), Gaps = 15/387 (3%)

Query: 25  FVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHG-SLNPQQLPET 83
            V+  S +GI +GV  L+ VLSVMNGF  EL++ I+GL      +       +   L + 
Sbjct: 1   MVALFSVLGIAVGVATLIIVLSVMNGFRSELRSKIIGLNGHVFAAPIDKLFTDYVDLSDR 60

Query: 84  AVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDL--EPGK 141
             K+ GV  V P+  G     S    +  ++ G+  A    +      +K   L      
Sbjct: 61  LEKVAGVRAVVPMVQGQAFASSPYGGSGVLVRGVRAADLPKIPAVSSAIKSGTLEGFDDG 120

Query: 142 YNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYE 200
             V LG++LA  LG+  GDQ+ +  P     TP G  P  + + V   F    ++ D   
Sbjct: 121 QGVALGKRLADSLGLQAGDQVTLSTPKG-ASTPFGTAPRTKAYTVKAIFEIGVTDFDSTM 179

Query: 201 MLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL---PEGSKWQDWRDRKGELF 257
             + + ++          ++   ++LD+   V  + +             DWR      F
Sbjct: 180 AFMPLSESQAFFNRDGD-VSVIEIYLDDADTVGEMREPLEMAAERPVLLTDWRQTNRTFF 238

Query: 258 QAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQ 317
            A+ +E+N+M L+L+LIV VA  NII+ L L+V +K  ++AIL+T G TP  IM VF++ 
Sbjct: 239 GALEVERNVMFLILNLIVIVATLNIISGLILLVRDKSSDIAILRTMGATPGTIMRVFLIN 298

Query: 318 GASAGIIGAILGAALGALLASQLNNLM------PIIGVLLDGAALPVAIEPLQVIVIALV 371
           GA  G++G  +G   G L    +  +            +   A +P  +   +V++I + 
Sbjct: 299 GALIGLVGTAIGLIGGVLFTLNIKPIQRTLFPGAWDPTVRFLAEIPAEMNTSEVVIIVIT 358

Query: 372 AMAIALLSTLYPSWRAAATQPAEALRY 398
           ++ ++L++TLYPSWRAA   P +ALRY
Sbjct: 359 SILLSLVATLYPSWRAARLDPVQALRY 385



>gi|42521026|ref|NP_966941.1|   hypothetical protein WD1229 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410767|gb|AAS14875.1|   conserved hypothetical protein [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 409

 Score =  240 bits (613), Expect = 6e-62
 Identities = 114/412 (27%), Positives = 209/412 (50%), Gaps = 16/412 (3%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M     + +   Y+R R   RF   ++  S IGI LGV  L+ V+SVMNGF  +L ++IL
Sbjct: 1   MSIAFEITMAACYLRAR-NARFCSIMTLFSIIGIALGVATLIVVMSVMNGFRAKLLDSIL 59

Query: 61  GLMPQAILS-SEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           G+     +    + + +   + ++  ++ G+ +  P+T   V++ +   +A  V+ G+  
Sbjct: 60  GIDGHINVYFDRNINSDYYAVSKSIERIPGILKATPMTNDQVIIVANGKIAGSVVRGVST 119

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
                 T    NV   D++     +I+G +LA  L ++ GD+I  +         +G +P
Sbjct: 120 KDLLDSTAVTNNVIIGDVKKFNEGIIIGARLAEVLNIDYGDEITFISSEE-FDALLGEMP 178

Query: 180 SQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
             + + VI  F     E D   + + ++ A     Y   +I    + +D+  + D L+  
Sbjct: 179 RMKKYKVIAIFDMGMFEYDNTLIYMPLKSAQAFFSYK-NSIKNIEVLVDDVTRADKLADA 237

Query: 239 KLPE-GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
              E G + + W+ ++   F A++ E+N+M L+L+LI+ VAAFNII++L ++V EK+  +
Sbjct: 238 IEKEIGMEAESWQSQQSHYFSALKTERNVMFLILTLIIVVAAFNIISNLMMIVQEKKSAI 297

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII---------- 347
           AI++T G T   IM +F   G   G  G  LG  +G + +  + ++   +          
Sbjct: 298 AIMRTFGATSGSIMRIFCACGLLIGFTGTCLGCIIGVVFSLNIESIRVFLENITNVKLFD 357

Query: 348 GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            ++   ++LPV + P  V+ I+ +A+ ++ L+T+ P+ +AAA  PAE LRYE
Sbjct: 358 PMIYFFSSLPVILVPQDVVNISALALLLSFLATIAPALQAAAQDPAEILRYE 409



>gi|34557623|ref|NP_907438.1|   hypothetical protein WS1259 [Wolinella succinogenes DSM 1740]
 gi|34483340|emb|CAE10338.1|   conserved hypothetical protein [Wolinella succinogenes]
          Length = 403

 Score =  240 bits (613), Expect = 6e-62
 Identities = 92/404 (22%), Positives = 192/404 (47%), Gaps = 6/404 (1%)

Query: 1   MYQPVAL--FIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNN 58
           M Q  AL  ++  RY+R   +  F    + L+  G+ +GVM L+  +++MNGF+++ +  
Sbjct: 1   MKQETALIPYLTKRYLRFDKSQPFISIAAILAFAGVAIGVMVLIVAMAIMNGFDKDFERK 60

Query: 59  ILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
           +  +     L  +      ++L +           +P      + +S  ++   V+ G+D
Sbjct: 61  LFTMNYPLTLYPKVSQGISEELLKELESSFPHLLFSPYLRTQAISKSGDAMEGAVVFGVD 120

Query: 119 PAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
             ++  +   +    +     G++++++G +L ++  + R  ++ ++     + T +   
Sbjct: 121 FEREKQINEVIAEALKESEISGRFDILVGSELRNEFFLARDSKLMLIFTQ-LEPTGLSLS 179

Query: 179 PSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
           P+ + F+V G F +  +  D   +  ++E    + +   G   G  ++  EP+K     +
Sbjct: 180 PTMKRFDVKGFFRSGLTAYDKGYIFASLEAIRAIKKKEEGYYDGIHVFAKEPMKEIDSIR 239

Query: 238 QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
            KLP  +    W  + G  F A+++EK  + ++L LI+ +A+ NII+SL + VM ++ E+
Sbjct: 240 AKLPLEAGIVGWWQQNGNFFAALQLEKRALFIVLMLIILIASLNIISSLLMTVMNRRREI 299

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNN--LMPIIGVLLDGAA 355
           A+L T G T  +I   F   G + G+ G  LG  L  +    L+   ++ +   +   + 
Sbjct: 300 ALLLTLGATQSEIKRTFFRLGNTIGLSGIALGVLLAGIALWVLSTFPIISLPADVYGSSK 359

Query: 356 LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           LP+ +  +   +I L +  I LLS+ YP+++A    P   LR E
Sbjct: 360 LPLELSWIDFGMILLGSTLIVLLSSYYPAYQATKIDPLSVLRNE 403



>gi|46308991|ref|ZP_00211183.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Ehrlichia canis str. Jake]
          Length = 403

 Score =  239 bits (611), Expect = 1e-61
 Identities = 105/405 (25%), Positives = 212/405 (52%), Gaps = 15/405 (3%)

Query: 8   FIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI 67
            + LRY++  ++      ++ LS +GITLGV  L+ V+SVMNGF  +L + ++GL     
Sbjct: 1   MLALRYLQSSSSQFLCSMITILSLVGITLGVATLIIVMSVMNGFGEKLLDCVVGLNGHIA 60

Query: 68  LSSEHGSL-NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLT 126
           +  +     +  ++ ++  ++ GV    PIT    +++S+ SV+  ++ GI+    +   
Sbjct: 61  IYCDGNFDYDYHEITKSIKEIPGVKYAVPITENQAMIKSSSSVSGVIVRGIEKQDIERNN 120

Query: 127 PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNV 186
             + N+ + D+      + +G +LA  L V+ GD++ ++    S  T +G IP  + + V
Sbjct: 121 IIVNNIVRGDIAEFNDGIAIGIKLAEVLRVDYGDKLTIISSE-SLSTVIGNIPRMKTYKV 179

Query: 187 IGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPE-GS 244
           +  F     E D   + + +  +     Y    +    + + +  K   + +    +   
Sbjct: 180 VAIFDVGMYEFDSSLVYMPLHASQLFFHYD-NRVKNIEVSIFDGNKSSEMLKLIENKIDM 238

Query: 245 KWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQG 304
           K +DW+ ++G  F A+ +E+N+M  +L+LI+ VA FNII+SL ++V +K+G +AI++T G
Sbjct: 239 KGEDWKMQQGSYFHALEIERNVMFFILTLIIIVATFNIISSLSILVQDKKGAIAIMRTLG 298

Query: 305 LTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPII----------GVLLDGA 354
           +T   I+ +F + G   G+IG +LG  +G + +  +N +  I+           ++    
Sbjct: 299 VTRCGILRIFCMCGVFIGLIGTVLGCVIGIVFSLNINAIKNILEKISNSNIFDPIIYFFD 358

Query: 355 ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            LP  +    V+ I+L+++ ++L++ + P+ +AA   PA+ LR+E
Sbjct: 359 TLPSVLLVEDVVKISLLSLFLSLIAAILPARKAACQDPADILRHE 403



>gi|48862033|ref|ZP_00315931.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Microbulbifer degradans
           2-40]
          Length = 412

 Score =  239 bits (611), Expect = 1e-61
 Identities = 136/416 (32%), Positives = 232/416 (55%), Gaps = 21/416 (5%)

Query: 1   MYQPVALFIGLRYMRG-RAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNI 59
           M   + + IGLRY    R   +   F+S +S  G+ +GV  L+TVLSVMNGF+REL+ NI
Sbjct: 1   MLNLLPIVIGLRYTGAKRKKSQLISFLSGISIAGLVVGVGLLITVLSVMNGFDRELRENI 60

Query: 60  LGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           LGL+PQA+++ + G    Q L +       +   AP      ++   +     V+ G++P
Sbjct: 61  LGLVPQAVINHQEGIAEWQPLVDELTADKDILAAAPYVQTYGLVALGKQAEPVVLYGVEP 120

Query: 120 AQK---DPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
             +     +T ++       +E G+ +++LG+ LA+ L V+ G+++ ++VP A       
Sbjct: 121 EYEVRVSRITDFIAADVLASIEQGEPSILLGKDLAATLNVSVGNKVMMVVPGADGGRAA- 179

Query: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
             P    F V+G   + +E+D    + ++  +  L  +P   +TG RL L+       + 
Sbjct: 180 --PKTGYFKVVGLVDSKTELDATLAITSLTHSLPLTSHP-NAVTGVRLKLNNLFDAPYVV 236

Query: 237 QQKLPE---GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEK 293
            + L E   G    +W    G L+ A++M K+++GLL+SL+VA+AAFN++++L L+V++K
Sbjct: 237 YRHLLELGPGYSGNNWTRTHGNLYHAIKMSKSLVGLLMSLVVAIAAFNVVSTLVLVVVDK 296

Query: 294 QGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDG 353
           QG++AIL+T G++ +QIM +F+ QG + G+IG  LG A+G +L+  + NL+ II  +   
Sbjct: 297 QGDIAILRTLGISTKQIMAIFITQGTAIGLIGTSLGLAVGCVLSLLVQNLVRIIEAVFGV 356

Query: 354 ----------AALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                       LP  I    ++ + + A  +  L+TLYP+W+A+  QPA+ALRYE
Sbjct: 357 QFLKSDVYPLTYLPSEILLQDILAVGITAFVMCFLATLYPAWKASRVQPADALRYE 412



>gi|33519855|ref|NP_878687.1|   ABC transporter integral membrane subunit [Candidatus Blochmannia
           floridanus]
 gi|33504200|emb|CAD83462.1|   ABC transporter integral membrane subunit [Candidatus Blochmannia
           floridanus]
          Length = 405

 Score =  237 bits (606), Expect = 3e-61
 Identities = 158/399 (39%), Positives = 251/399 (62%), Gaps = 6/399 (1%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
           V LF+  RY+ G+  +R  + + W+S+I I L + A++ +LSVMNGFE EL+ N+L L+P
Sbjct: 6   VVLFVASRYIYGKTVNRLNQCIYWVSSIFIMLSMSAMIIILSVMNGFESELKKNLLYLIP 65

Query: 65  QAILSSEHGSLNPQQLPETAVKLD----GVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             +++S  G +N + +P+    L      +  + P+   D++LQS++S+++G+M G+DP 
Sbjct: 66  HVVVTSTQGYINSKNIPDFL-SLPAIKNNITYIKPLIFSDIILQSSKSISLGMMFGVDPN 124

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
             +PL  YL++   + L  GKY +I+G  LA +L VN  DQIR+ VPS    TP+G  P 
Sbjct: 125 HFEPLFDYLIHHNVSQLISGKYYIIIGSALAQKLSVNIHDQIRLTVPSIHYNTPIGCFPI 184

Query: 181 QRLFNVIGTF-AANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
           QRLF ++  + ++N E+D  ++LV+  DA+ L+ YP  NITGWR+W+DEP KV  L Q +
Sbjct: 185 QRLFTILDIYHSSNDEIDSCQVLVHKNDAAVLLNYPPQNITGWRIWIDEPFKVSKLEQWQ 244

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
            P+   W DWR  KG LFQA++MEKN+M  L  L++   + NII  L L++ EK  E+AI
Sbjct: 245 CPKDWIWTDWRKYKGSLFQAIKMEKNVMFFLFILMIVTVSGNIIAFLVLLITEKHKEIAI 304

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
           LQT G    QI+++ ++QG S+G++G I G  LG  LA +LN ++ ++ +  +    P+ 
Sbjct: 305 LQTYGFNRLQIVILLIIQGVSSGVLGIICGVGLGVCLAKKLNQILFLLNIFSENLYFPIE 364

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRY 398
           I  +Q+  I+L+     +L  LYP+W  ++  PA+ LR+
Sbjct: 365 IPFIQIFNISLMICGFIVLIILYPAWYISSIYPAQVLRH 403



>gi|20091320|ref|NP_617395.1|   hypothetical protein MA2489 [Methanosarcina acetivorans C2A]
 gi|19916448|gb|AAM05875.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 389

 Score =  237 bits (604), Expect = 5e-61
 Identities = 87/402 (21%), Positives = 172/402 (42%), Gaps = 27/402 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
             L I LR +  R         ++ + + + L V  +  ++++++GF+ EL  + +   P
Sbjct: 2   YELKIALRQVFSRRRQ------TFFAILAVALAVTVITVMMAMLSGFQDELVTSSIENNP 55

Query: 65  QAILSSEHGSLN----PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             +++ +          +   +   + +GV  V+P   G V L+   +     + G+DP 
Sbjct: 56  HIVINPQDEEEEFIHLYRYTSDLIAEKEGVIAVSPKYLGQVALEYRDNAEGVSLQGVDPM 115

Query: 121 QKDPLTPYLVNVKQTDLE---PGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            ++ +     +V + D       +Y ++LG+QLA  L V+ GD++  + P +        
Sbjct: 116 AEENVMRVSEDVIEGDFMTLVHTRYGILLGDQLAENLEVHVGDRVDAVFPGS-------- 167

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
                 F V+G     +  D       ++        P   ++   + + +P + D ++ 
Sbjct: 168 --QTTSFKVVGLINTGTAEDEVTAYARLDSVQDFFNEPG-VVSTIGVRVVDPYQADIIAG 224

Query: 238 QKLPE-GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGE 296
               E G     W +   E+   +  +   + +   LI  +A F I  +L  +V ++  E
Sbjct: 225 SIERETGLDAVSWIEENAEILNLLETQTVFVNIFYFLIYGIAGFGIANTLITIVAQRTRE 284

Query: 297 VAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG--VLLDGA 354
           + IL+  G + + IM VF+ Q    G IG ILG  LG ++   L +    +   +     
Sbjct: 285 IGILKAMGASQKSIMFVFLFQSMILGAIGLILGTILGYIVTVGLQSYEIEVPQEMYFGLQ 344

Query: 355 ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            LP+ IEPL  +  A  A  I ++S +YP+ +AA   P +A+
Sbjct: 345 TLPLEIEPLNFVYAAFFAFIINIISGIYPARKAAKLDPVKAI 386



>gi|48838239|ref|ZP_00295186.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Methanosarcina barkeri str.
           fusaro]
          Length = 389

 Score =  234 bits (598), Expect = 3e-60
 Identities = 96/401 (23%), Positives = 185/401 (46%), Gaps = 26/401 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
             LFI LR +R R       F + LS   I L VM L    ++M GF  EL +  +  +P
Sbjct: 3   YELFIALRQIRARK------FQTILSVGAIALAVMVLTVSQALMVGFTGELYDTTVDKLP 56

Query: 65  QAILSSEHGSL---NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
           Q  +S + G       + L +   K +GV  V+P  TG    +   +     + G+ P Q
Sbjct: 57  QVSVSPQEGEDYIYLYRTLIDEIGKTEGVTAVSPFLTGKASFKFKTNSLNAELKGVLPLQ 116

Query: 122 KDPLTPYLVNVKQTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           ++ ++    ++ + D       +  V++G +LA +L VN GD + V  P+A+  +     
Sbjct: 117 ENDISAIEADMVEGDFRELEYSRNTVVIGSKLADKLEVNPGDSVDVSFPNANPLS----- 171

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
                  V+G F   S +D      +++ A      P   I G  + L++  +   ++ +
Sbjct: 172 -----LRVVGIFHTGSPLDESLTYTSLDTAQEFYNVP-DVINGLSVRLEDFNRDREVAAK 225

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
               G K + W +   E+ + + +E     ++L LIV +A+F ++++L L V+    ++ 
Sbjct: 226 IEKTGYKAKGWTETNPEILRTIAVESTSNNVVLGLIVVIASFGVVSALNLSVIGATSQIG 285

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL---MPIIGVLLDGAA 355
           +L+  G T   I  +F++Q +  G++GA++G   G +++  L           +    A 
Sbjct: 286 MLRAMGATISSIRTIFVLQSSILGLLGALIGTLTGVVISLGLGQYEMPAASSELYGGMAT 345

Query: 356 LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           +P+ +    ++VI L    + L++ +YP+ +AA   P +A+
Sbjct: 346 IPIIVRTGDILVIILAVFLLNLIAGIYPAQQAAKLDPVKAI 386



>gi|58584740|ref|YP_198313.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58419056|gb|AAW71071.1|   ABC-type transport system, involved in lipoprotein release,
           permease component [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 385

 Score =  233 bits (596), Expect = 4e-60
 Identities = 106/386 (27%), Positives = 195/386 (50%), Gaps = 15/386 (3%)

Query: 27  SWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILS-SEHGSLNPQQLPETAV 85
           +  S IGI LGV  L+ V+SVMNGF   L ++ILG+     +    + + + + + E+  
Sbjct: 2   TLFSIIGIALGVATLIVVMSVMNGFRARLLDSILGIDGHINVYFDRNINSDYRTVLESVK 61

Query: 86  KLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVI 145
           K+ GV +   +T   V++ +   +   V+ G+        T    +V   D+      V+
Sbjct: 62  KIPGVLKATLMTNDQVIITANSRIVGAVVRGVSAKDLLNNTTIKNSVIVGDVRKFDKGVV 121

Query: 146 LGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANS-EVDGYEMLVN 204
           +G +LA  L V  GD+I ++       + +  +P  + + VI  F     E D   + + 
Sbjct: 122 IGARLAEVLDVGYGDKIVLISSEG-FDSLLSEVPRMKEYEVIAIFDMGMFEYDNTLIYMP 180

Query: 205 IEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPE-GSKWQDWRDRKGELFQAVRME 263
           I+ A     Y   +     +++ +  K + L+     E G + + W+ ++   F A+  E
Sbjct: 181 IKSAQAFFHYR-DSARNIEVFVSDLTKANELANIIEKETGMEARSWQLQQSHYFNALETE 239

Query: 264 KNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGI 323
           +N+M L+L+LI+ VAAFNI+++L ++V EK+  +AI++T G T   IM +F + G   G 
Sbjct: 240 RNVMFLILTLIIIVAAFNIVSNLMMIVQEKKSAIAIMRTFGATSGSIMRIFCICGLLIGF 299

Query: 324 IGAILGAALGALLASQLNNLMPII----------GVLLDGAALPVAIEPLQVIVIALVAM 373
            G  LG  +G + +  + N+   +           ++   ++LPV + P  ++ I+ +A+
Sbjct: 300 TGTCLGCIIGVVFSLNIENIRVFLESITNVKLLDPMVYFFSSLPVILVPQDIVNISALAL 359

Query: 374 AIALLSTLYPSWRAAATQPAEALRYE 399
            ++ L+T+ P+ +AAA  PAE LRYE
Sbjct: 360 FLSFLATVAPALQAAAQDPAEILRYE 385



>gi|21226193|ref|NP_632115.1|   ABC transporter permease protein [Methanosarcina mazei Go1]
 gi|20904424|gb|AAM29787.1|   ABC transporter permease protein [Methanosarcina mazei Goe1]
          Length = 392

 Score =  232 bits (593), Expect = 1e-59
 Identities = 91/401 (22%), Positives = 181/401 (45%), Gaps = 26/401 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
             LFI  R +R R       F + LS   I + VM L    ++M GF  EL    +  +P
Sbjct: 6   YELFIAFRQIRARK------FQTLLSVGAIAIAVMVLTVSQALMVGFTGELYKTTVDKLP 59

Query: 65  QAILSSEHGSL---NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
              +S + G         L E    ++GV  V+P  TG    +   +     + G+ P+Q
Sbjct: 60  HVSVSPQEGEDYIYLYGTLMERIGTIEGVTAVSPFLTGQASFRFKDNSLNAELRGVVPSQ 119

Query: 122 KDPLT---PYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           ++ ++     +V     +LE  +  V++G +LA +L VN GD I V  P+A+  +     
Sbjct: 120 ENEISSIEEDIVEGSFRELEFSRNTVVIGSKLAEKLEVNLGDSIAVSFPNANPLS----- 174

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
                  V+G F   S +D      +++ A R    P   + G  + L +  +   ++++
Sbjct: 175 -----LRVVGIFHTRSPLDESLTYTSLDTARRFYDVP-NVVNGVWVRLSDFNRDREVAEE 228

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
               G   + W +    + + + +E+    ++  LI+ +A+F ++++L L V+   G++ 
Sbjct: 229 IEELGYNARGWTETNPAILRTIAIERTSNNVVYGLIIVIASFGVVSTLNLSVIGATGQIG 288

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL---MPIIGVLLDGAA 355
           +L+  G     I  +F++Q    G++GA++G   G L++  +           V    + 
Sbjct: 289 MLRAMGAPVSSIQRIFILQSGILGLLGALVGTFAGVLISLAIGQYEIPSTQADVYAGMSF 348

Query: 356 LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           +P+ +    +++I L    + L++ +YP+ +AA   P +A+
Sbjct: 349 IPIVVRAQDILIIILAVFLLNLITGIYPARQAAKLDPVKAI 389



>gi|57242035|ref|ZP_00369975.1|   conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
 gi|57017227|gb|EAL54008.1|   conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
          Length = 397

 Score =  232 bits (593), Expect = 1e-59
 Identities = 79/400 (19%), Positives = 176/400 (44%), Gaps = 6/400 (1%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
             +  ++  +Y+R      F      L+ +G+ +G+  L+  +++MNGF++E Q     +
Sbjct: 1   MSLTRYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFQKRFFVM 60

Query: 63  MPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQK 122
                +  +  +    +      +       +P  +  V+ +       GV+ G++  ++
Sbjct: 61  NYPITILPKFYAPVDDEFVAELRREFSHLLFSPYLSTQVIAKGDNRFEGGVVFGVNFEEE 120

Query: 123 DPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQR 182
             +   + +    D     Y++++G  LA +  + + D++ ++  + +  +     P+ +
Sbjct: 121 KKINEVVKDA-LKDTNLSSYDILIGGALAEEFRLKKNDKLSLIFSNLNP-SGFSLTPTTK 178

Query: 183 LFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLP 241
            F+V   F +     D   M V  E   +++    G   G  ++ +   +  +  +  L 
Sbjct: 179 RFDVKAKFNSGLIFYDKAYMYVKAETLRKVLGVKEG-YDGVHIYSENAFEDIAKLRTYLG 237

Query: 242 EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQ 301
           +      W ++    F A+ +EK  + ++L LI+ VA  NII+SL ++VM ++ E+A+L 
Sbjct: 238 QDYAAIGWWEQNQNFFSALELEKRALFIVLMLIILVAGLNIISSLLMIVMNRRSEIALLL 297

Query: 302 TQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNN--LMPIIGVLLDGAALPVA 359
             G + ++I   F   G   G  G + G  L  ++   L N  L+ +   +   + LP+ 
Sbjct: 298 ALGASKKEIKKSFFALGMLIGGSGMVCGVILAFVVLWLLGNFDLVSLPADVYGTSKLPLD 357

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           +  L  ++  + A+ I  LS+ YP+ +A      + LR E
Sbjct: 358 LSVLDFVLTLMGALVIIALSSFYPAKKATEVNILDTLRNE 397



>gi|20090527|ref|NP_616602.1|   hypothetical protein MA1674 [Methanosarcina acetivorans C2A]
 gi|19915553|gb|AAM05082.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 389

 Score =  231 bits (590), Expect = 2e-59
 Identities = 82/402 (20%), Positives = 172/402 (42%), Gaps = 27/402 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
             L I LR +  R         +  + + + L V  +  ++++++GF+ EL ++ +   P
Sbjct: 2   YELKIALRQVLSRKKQ------TLFAILAVALAVAVITVMMAMLSGFQDELVSSSIENNP 55

Query: 65  QAILSSEHGSLN----PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             +++ +          +       + +GV  V+P   G V L+   +     + G+DP 
Sbjct: 56  HIVITPQDEKEEFIHLYRHTSALIAEKEGVIAVSPKYLGQVALEYRDNAEGVSLQGVDPV 115

Query: 121 QKDPLTPYLVNVKQTDLE---PGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            ++ +     +V + D       +  ++LG++LA  L V+ GD++  + P +        
Sbjct: 116 AEENVMRVSEDVVEGDFMTLVHTRDGILLGDKLAENLEVHVGDRVDAVFPGS-------- 167

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
                 F VIG     +  D       ++        P   ++   + + +P + ++++ 
Sbjct: 168 --KTTSFKVIGLIHTGTSADEVTAYARLDSVQDFFDEPG-VVSNIGVRVADPYQAEAIAA 224

Query: 238 QKLPE-GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGE 296
               E G     W +   E+   +  +   + +   LI  +A F I  +L  +V ++  E
Sbjct: 225 SIEEETGLDAVSWSEANAEILNLLDTQMVFVNIFYLLIYGIAGFGIANTLITIVAQRTRE 284

Query: 297 VAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG--VLLDGA 354
           + IL+  G + + IM+VF+ Q    G IG +LG  LG ++   L N    +   +     
Sbjct: 285 IGILKAMGASQKSIMVVFLFQSLVLGAIGLVLGIILGYIVTIALQNYEIEVPQEMYFGLQ 344

Query: 355 ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            LP+ ++PL  +  A  A  + ++S +YP+ +AA   P +A+
Sbjct: 345 TLPLEVKPLNFVYAAFFAFIVNIISGIYPARKAAKLDPVKAI 386



>gi|57237769|ref|YP_179017.1|   permease, putative [Campylobacter jejuni RM1221]
 gi|57166573|gb|AAW35352.1|   permease, putative [Campylobacter jejuni RM1221]
          Length = 401

 Score =  231 bits (589), Expect = 3e-59
 Identities = 80/403 (19%), Positives = 180/403 (44%), Gaps = 6/403 (1%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M + V  ++  +Y+R      F      L+ +G+ +G+  L+  +++MNGF++E +    
Sbjct: 1   MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
            +     +  +  +    +  +   K       +P  +  VV++       GV+ G++  
Sbjct: 61  VMNYPITILPKFYAPVNDEFIDELRKTFPNLLFSPYISTQVVVKGDNRFEGGVLFGVNFN 120

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
            +  +   +    + +   G +++++G  L  + G+++ D++ ++  + +  +    IP 
Sbjct: 121 DEKKINEVVAKALKDENLSG-FDILVGSALTDEFGLHKNDKLSLIFSNLNP-SGFSLIPQ 178

Query: 181 QRLFNVIGTFAANSE-VDGYEMLVNIEDASRLMRYPAG-NITGWRLWLDEPLKVDSLSQQ 238
            + F+V   F +     D   M  +++   +++  P   N  G  ++ D   K     + 
Sbjct: 179 TKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPNYDGIHVYSDNAFKDVEKIKS 238

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
            L +      W ++    F A+ +EK  + ++L LI+ VA+ NI++SL ++VM ++ E+A
Sbjct: 239 YLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIILVASLNIVSSLLMIVMNRRSEIA 298

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNN--LMPIIGVLLDGAAL 356
           +L   G +  ++   F   G   G  G I+G  L       L N  ++ +   +   + L
Sbjct: 299 LLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAFFALWLLGNFDIVTLPADVYGTSKL 358

Query: 357 PVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           P+ +  +   +  + A+ I  LS+ YP+ +A      + LR E
Sbjct: 359 PLDLSLMDFSLTIVGALIIIALSSFYPAKKATQINILDTLRNE 401



>gi|20092063|ref|NP_618138.1|   hypothetical protein MA3247 [Methanosarcina acetivorans C2A]
 gi|19917277|gb|AAM06618.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 392

 Score =  230 bits (588), Expect = 5e-59
 Identities = 90/401 (22%), Positives = 176/401 (43%), Gaps = 26/401 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
             LFI LR +R R       F + LS   I L VM L    ++M GF  EL +  +  +P
Sbjct: 6   YELFIALRQIRARK------FQTLLSVGAIALAVMVLTISQALMVGFTEELYDTTVDKLP 59

Query: 65  QAILSSEHGSL---NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
           Q  +S + G         L E    ++ V  V+P  TG    +   +     + G+ P +
Sbjct: 60  QVSVSPQEGEDYIYLYGTLMEEISSIEEVTAVSPFLTGQASFRFKDNSLNAELKGVIPLR 119

Query: 122 KDPLTP---YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           +D ++     +V     +LE     V++G +LA +L VN GD I V  P+A+  +     
Sbjct: 120 EDEISSIEADMVEGNFRELEFSVNTVVIGSKLAEKLEVNVGDSIDVSFPNANPLS----- 174

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
                  V+G F   S +D      +++ A      P   + G  + L +      ++ +
Sbjct: 175 -----LRVVGIFHTGSPLDESLAYTSLDTAQEFYDVP-DVVNGISVRLQDFNMDREVAAE 228

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
               G + + W +    + + + +E     ++  LI+ +A+F ++++L L V+   G++ 
Sbjct: 229 IGKTGYEAKGWTETNPAILRTIAIESTSNNVVYGLIIVIASFGVVSTLNLSVIGATGQIG 288

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL---MPIIGVLLDGAA 355
           +L+  G     I  +F++Q    G++GA+ G   G L++  +           V    + 
Sbjct: 289 MLRAMGAPVSSIQKIFILQSGILGLLGALFGTFAGVLISLAIGGYEIPAASSDVYGGISF 348

Query: 356 LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           +P+ +    +++I      + L++ +YP+ +AA   P +++
Sbjct: 349 IPIVVRAQDIVLIIAAVFLLNLITGVYPARQAAKLDPVKSI 389



>gi|6968378|emb|CAB73198.1|   putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|11279732|pir||D81368   probable integral membrane protein Cj0941c [imported] -
           Campylobacter jejuni (strain NCTC 11168)
 gi|15792270|ref|NP_282093.1|   putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
          Length = 401

 Score =  229 bits (585), Expect = 9e-59
 Identities = 79/403 (19%), Positives = 180/403 (44%), Gaps = 6/403 (1%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M + V  ++  +Y+R      F      L+ +G+ +G+  L+  +++MNGF++E +    
Sbjct: 1   MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
            +     +  +  +    +  +   K       +P  +  VV++       GV+ G++  
Sbjct: 61  VMNYPITILPKFYAPVNDEFIDELRKTFPNLLFSPYLSTQVVVKGDNRFEGGVLFGVNFN 120

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
            +  +   +    + +   G +++++G  L  + G+++ D++ ++  + +  +    +P 
Sbjct: 121 DEKKINEVVAKALKDENLSG-FDILVGSALTDEFGLHKNDKLSLIFSNLNP-SGFSLVPQ 178

Query: 181 QRLFNVIGTFAANSE-VDGYEMLVNIEDASRLMRYPAG-NITGWRLWLDEPLKVDSLSQQ 238
            + F+V   F +     D   M  +++   +++  P   N  G  ++ D   K     + 
Sbjct: 179 TKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGIPKNPNYDGIHVYSDNAFKDVEKIKS 238

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
            L +      W ++    F A+ +EK  + ++L LI+ VA+ NI++SL ++VM ++ E+A
Sbjct: 239 YLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIILVASLNIVSSLLMIVMNRRSEIA 298

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNN--LMPIIGVLLDGAAL 356
           +L   G +  ++   F   G   G  G I+G  L       L N  ++ +   +   + L
Sbjct: 299 LLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAFFALWLLGNFDIVTLPVDVYGTSKL 358

Query: 357 PVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           P+ +  +   +  + A+ I  LS+ YP+ +A      + LR E
Sbjct: 359 PLDLSLMDFSLTIVGALIIIALSSFYPAKKATQINILDTLRNE 401



>gi|48838240|ref|ZP_00295187.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Methanosarcina barkeri str.
           fusaro]
          Length = 398

 Score =  229 bits (585), Expect = 9e-59
 Identities = 84/402 (20%), Positives = 171/402 (42%), Gaps = 27/402 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
             L I LR +  R         ++ + + + L V  +  ++++++GF+ EL  +     P
Sbjct: 11  YELKIALRQVFSRKRQ------TFFAILAVALAVAVITVMMAMLSGFQGELIKSSTENSP 64

Query: 65  QAILSSEHGSL----NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             +++ +          +      ++ +GV  V+P   G   L+   +     + GI+P 
Sbjct: 65  HIVINPQDEKDGFIHLYKSNSALIMEKEGVIAVSPKYLGQAALEYKDNAEAISLQGIEPE 124

Query: 121 QKDPL---TPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            +D +   +  ++      L   ++ ++LG++LA  LGV  GD++  + P +        
Sbjct: 125 AEDKVMRVSKDMIEGSFLSLTHTRHGIVLGDKLAENLGVQPGDRVDAVFPGS-------- 176

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
                 F VIG     +E D       ++        P   ++   + + +P + D ++ 
Sbjct: 177 --KTTSFKVIGLIHTGTEADEVTAYARLDSVQDFFNEPG-VVSTIGVRVSDPYQADIIAS 233

Query: 238 QKLPEG-SKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGE 296
               E       W +   E+   +  +K  + +   LI  +A F I  +L  +V ++  E
Sbjct: 234 SIERETELNAVSWIEANAEILNLLNTQKVFVNVFYILIYGIAGFGIANTLITIVAQRTRE 293

Query: 297 VAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG--VLLDGA 354
           + IL+  G + + IM+VF+ Q    G +G +LG  LG +    L +    +   +     
Sbjct: 294 IGILKAMGASQKSIMIVFLFQSVILGAMGLVLGTILGYIATITLQSYKIAVPQEMYFGLQ 353

Query: 355 ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            LP+ +EPL  +  A  A  I ++S +YP+ +AA   P +A+
Sbjct: 354 TLPLEVEPLNFVYAAFFAFIINIISGIYPARKAAKLDPVKAI 395



>gi|56417192|ref|YP_154266.1|   hypothetical protein AM1183 [Anaplasma marginale str. St. Maries]
 gi|56388424|gb|AAV87011.1|   hypothetical protein AM1183 [Anaplasma marginale str. St. Maries]
          Length = 408

 Score =  227 bits (579), Expect = 5e-58
 Identities = 103/407 (25%), Positives = 195/407 (47%), Gaps = 18/407 (4%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
           +   +  RY++           + LS +GI +GV  L++V SVMNGF  +L ++ILG+  
Sbjct: 8   LEWLLARRYIQSNGGRFLFSTATVLSILGICIGVATLISVTSVMNGFSAKLLSSILGMNG 67

Query: 65  QAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDP 124
              +       +   +      + GV   AP+  G  +L+   ++   V+ G+       
Sbjct: 68  HITIHCNRP--DYPNVIAEIYHVPGVVSAAPVIEGQALLKYENNIMGAVVRGMHMCDIRR 125

Query: 125 LTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLF 184
                V     D+   +  ++LG +LA  +G + GD+I ++ P  S  T  G +P  + +
Sbjct: 126 KLHGYVVRGDVDML--EEGIVLGFRLAESIGADYGDEITIISPETSP-TIFGAVPRTKTY 182

Query: 185 NVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV-DSLSQQKLPE 242
            V G F     E D     + + D+  L  Y A  I    ++L++  K  ++L +     
Sbjct: 183 KVTGIFDVGVYEYDSAFAYIPLRDSQLLFGY-ANRIKYIEVFLEDVTKSSEALVEIARRT 241

Query: 243 GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQT 302
             K +DW+ ++G+ F+A+ +E++ M  +L+LIV VAAFNII+ + ++V +K+G +AI++T
Sbjct: 242 SLKVEDWKVQQGQYFRALELERDAMFFILALIVIVAAFNIISGISVLVRDKRGAIAIMRT 301

Query: 303 QGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL----------LD 352
            G++   +M +F + GA  GI+G   G  LG   ++ + N+                   
Sbjct: 302 MGVSRYAVMRIFCMCGAFIGILGTSFGCVLGVAFSANIENINNFFSSFGHGTLFESIAYF 361

Query: 353 GAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +   +    +  + +++++ +LL+ + P+  AA   P + LRYE
Sbjct: 362 LEGISPEMMFGDIARVVMLSLSASLLAAVPPAIVAARQNPVDILRYE 408



>gi|57240551|ref|ZP_00368500.1|   conserved hypothetical integral membrane protein [Campylobacter
           lari RM2100]
 gi|57018892|gb|EAL55665.1|   conserved hypothetical integral membrane protein [Campylobacter
           lari RM2100]
          Length = 400

 Score =  226 bits (576), Expect = 1e-57
 Identities = 80/403 (19%), Positives = 190/403 (47%), Gaps = 7/403 (1%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M + +  ++  +Y+R      F      L+ +G+++G+  L+  +++MNGF++E +  + 
Sbjct: 1   MQKSIPRYLLFKYLRFDKDQPFIMLSKILAFLGVSIGLCVLLVAMAIMNGFDKEFERKLF 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAV-KLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
            +     +    G+    ++ +    K   +   +P     V+ ++   +  G++ G++ 
Sbjct: 61  TMNYPITILPRFGASVDDKILQELRIKFPNLL-FSPYIATQVIARNDLKLEGGMLFGVNF 119

Query: 120 AQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
             +  +   +      + +   +++++G+ L  + G++  ++I ++  + +  + +  IP
Sbjct: 120 EDEKKINEVIAQA-LENKKLDNFDILVGKGLKDEFGLDYNEKITLIFSNLNA-SGLSLIP 177

Query: 180 SQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
             + F+V   F++     D   M  +++  ++++ YP G+  G  ++ ++P +     + 
Sbjct: 178 QVKRFDVKADFSSGLLAYDKAYMYTDVKALAKILSYPQGSYDGVHVYSNKPFEDIKQIED 237

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
            L        W ++ G  F A+ +EK  + ++L LI+ VA+ NI++SL ++VM ++ E+A
Sbjct: 238 FLGARYASIGWWEQNGNFFAALALEKRALFIVLMLIILVASLNIVSSLLMIVMNRRSEIA 297

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNN--LMPIIGVLLDGAAL 356
           +L + G +  +I   F   G   G  G I G  L A+    L N  ++ +   +   + L
Sbjct: 298 LLLSLGASKLEIKKTFFSLGFLIGGSGIIAGVILAAIALWVLGNFDIISLPSDVYGMSKL 357

Query: 357 PVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           P+ +  +        A+ I  LS+ YP+ +A      + LR E
Sbjct: 358 PLELSLVDFCATLFGAIVIVGLSSYYPAKKATQVDILDTLRNE 400



>gi|21228952|ref|NP_634874.1|   ABC transporter, permease protein [Methanosarcina mazei Go1]
 gi|20907489|gb|AAM32546.1|   ABC transporter, permease protein [Methanosarcina mazei Goe1]
          Length = 405

 Score =  222 bits (566), Expect = 1e-56
 Identities = 84/402 (20%), Positives = 170/402 (42%), Gaps = 27/402 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
             L I LR +  R         +  + + + L V  +  ++++++GF+ EL  + +   P
Sbjct: 18  YELKIALRQILSRKKQ------TLFAILAVALAVAVITVMMAMLSGFQDELVRSSIENNP 71

Query: 65  QAILSSEHGSLN----PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             ++S +          +       K +GV  V+P   G   L+   +     + G++P 
Sbjct: 72  HIVISPQDEGEEFIHLYRYTSALIAKKEGVIAVSPKYLGQAALEYRDNAEGVSLQGVNPE 131

Query: 121 QKDPLTPYLVNVKQTDL---EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            ++ +     +V + DL      KY ++LG++LA  L V+ GD++ V+ P +        
Sbjct: 132 SEENVMRVNKDVIEGDLLTLVHTKYGILLGDRLAENLEVHIGDRVDVVFPGS-------- 183

Query: 178 IPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
                 F V+G     +  D       ++        P   ++   + + +P + + ++ 
Sbjct: 184 --QTTSFKVVGLVHTGTAADETIAYARLDSVQDFFNEPG-VVSTIGVRVADPYQANVIAS 240

Query: 238 QKLPE-GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGE 296
               E G     W +   E+   +  +   + +   LI  +A F I  +L  +V ++  E
Sbjct: 241 SIERETGLNAVSWSEANAEILGLLETQMVFVNIFYLLIYGIAGFGIANTLITIVAQRTRE 300

Query: 297 VAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIG--VLLDGA 354
           + IL+  G + + IM++F+ Q    G IG +LG  LG +    L N    +   +     
Sbjct: 301 IGILKAMGASQKSIMVIFIFQSLVLGAIGLVLGTVLGYITIVALQNYKIEVPQEMYFGLQ 360

Query: 355 ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            LP+ +E L  +  A  A  + +LS +YP+ +A+   P +A+
Sbjct: 361 TLPLEVEALNFVYAAFFAFIVNILSGIYPARKASKLDPVKAI 402



>gi|15611791|ref|NP_223442.1|   hypothetical protein jhp0724 [Helicobacter pylori J99]
 gi|4155280|gb|AAD06298.1|   putative [Helicobacter pylori J99]
 gi|7464818|pir||D71897   hypothetical protein jhp0724 - Helicobacter pylori (strain J99)
          Length = 410

 Score =  220 bits (561), Expect = 6e-56
 Identities = 92/409 (22%), Positives = 188/409 (45%), Gaps = 12/409 (2%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
            + +  F+  RY+R   +  F    + L+  G+ +GVM L+  +++MNG  +E +  +  
Sbjct: 3   NRSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFV 62

Query: 62  LMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
           +     L +       +++ +   K       +P       ++SA S+  GV+ G+D ++
Sbjct: 63  MNYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSPIKSAHSMNGGVVFGVDFSK 122

Query: 122 KDPLTPYL----VNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           +  +   L     N+ + DL    +N+I+G+ L   L ++   +  +      + T +  
Sbjct: 123 ERHINEVLNDALKNINENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTE-LEPTGLTL 181

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLW----LDEPLKV 232
            P  + F + G F +     D   M  +++  S + R P G   G  ++    + +  K+
Sbjct: 182 SPIMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIEKL 241

Query: 233 DSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
            +  +     G   + W  + G  F A+ +EK  + ++L LI+ +A+ NII+SL ++VM 
Sbjct: 242 RNALKTINHHGIGIEGWWQQNGNFFSAMELEKRALFIVLMLIILMASLNIISSLLMVVMN 301

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN--NLMPIIGVL 350
           ++ E+A+L + G + ++I   F   G   G+ G ILG  L  +    L+   ++ +   +
Sbjct: 302 RRKEIALLFSMGSSQKEIQKTFFYLGNIIGLGGVILGVVLAFISMYLLSVFPIISLPADV 361

Query: 351 LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                LP+ +  +   +  + ++ I  LS+ YPS +A+A      LR E
Sbjct: 362 YGINTLPLDLSLMDFTLTLIGSVIIVALSSYYPSKKASAIDALSVLRNE 410



>gi|42522295|ref|NP_967675.1|   Macrolide specific ABC-type transporter, ATP-binding protein
           [Bdellovibrio bacteriovorus HD100]
 gi|39574826|emb|CAE78668.1|   Macrolide specific ABC-type transporter, ATP-binding protein
           [Bdellovibrio bacteriovorus HD100]
          Length = 650

 Score =  218 bits (556), Expect = 2e-55
 Identities = 61/414 (14%), Positives = 143/414 (34%), Gaps = 60/414 (14%)

Query: 22  FGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAIL------------- 68
             +  S LS +GI +GV A+V +L++  G  + ++  +  L    ++             
Sbjct: 261 ANKVRSGLSMLGILIGVAAVVGMLALGTGARQSIEKQLSSLGSNLLVLRAGNVRVGGVMQ 320

Query: 69  -SSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTP 127
            S     ++   +     ++ G+  V+P ++G   +          ++G+ PA +     
Sbjct: 321 ESGVRIRISLDDVSTIKNQISGIKDVSPSSSGRGQITYLNKNWNTQVMGVAPAYEQMRAS 380

Query: 128 YLVNVKQTDLEPGKY---NVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLF 184
             +  +    E  +      ++G  +A +L                         ++  F
Sbjct: 381 TPIFGRFFSEEENQRRTLVAVIGTTVARELF------------GEKSPIGEMIKINKVNF 428

Query: 185 NVIGTFAANS-----EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK 239
            VIG           + D   ++  +    RL       +    + + +   +  +    
Sbjct: 429 RVIGVLPEKGAAGPQDQDDRILVPVVTAMYRLFGR--NYVDSVDIEVRDAADIPEVQDSL 486

Query: 240 LP--------------EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITS 285
                           +     +  D +  L    +    ++  + ++ + V    I+  
Sbjct: 487 QELMNKRHRVPVSSQGDAFNVFNMADIQQALNSTSQTLSMLLASIAAISLVVGGIGIMNI 546

Query: 286 LGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMP 345
           + + V E+  E+ + +  G   R I++ F+ +     + G +LG ALG   +  ++ ++ 
Sbjct: 547 MLVSVTERTKEIGLRKAIGARRRDILLQFLAESIVVSVCGGLLGIALGVGFSLLISKVLG 606

Query: 346 IIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                         +    VI+    +  I ++   YP+ +A+   P EALRYE
Sbjct: 607 ----------WSTVVSAGSVILSFGFSALIGIVFGSYPASKASKLHPIEALRYE 650



>gi|23475819|ref|ZP_00131093.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Desulfovibrio desulfuricans
           G20]
          Length = 576

 Score =  217 bits (553), Expect = 5e-55
 Identities = 92/314 (29%), Positives = 163/314 (51%), Gaps = 11/314 (3%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
             LF+ LRY+  R    F   +S +S +G+ LGV +L+ VL VMNGF  +++  ILG+  
Sbjct: 3   FELFVALRYLFARRKQTFISVISVISVLGVALGVASLIVVLGVMNGFTVDMREKILGVNA 62

Query: 65  QAILSSEHGSLN-PQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKD 123
             I  +  G ++   +L   A  + GV    P    +V+L +   V   V+ G+DP    
Sbjct: 63  HVITLAAGGGISGYPELVRKAETVPGVKGATPFIYSEVMLSTRYGVKGVVLRGVDPVSAP 122

Query: 124 ---PLTPYLVNVKQTDL-EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
               +   +V+    DL   G   +++G++LA +LG+  G ++ ++ PS  + T  G  P
Sbjct: 123 AVLGIAGRMVDGSLADLERSGAPGLVIGKELAKRLGITVGSRVNLLSPSG-EKTSAGFTP 181

Query: 180 SQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS-- 236
               F + G F+    E D     V+++ A  L+  PAG ++G  + +D+  + D+++  
Sbjct: 182 RILSFKIAGIFSTGMFEYDSSLGFVSLDAARDLLGMPAGTVSGLEIVVDDIYRADTVAQA 241

Query: 237 --QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
             Q         ++W +    LF A+++EK  M ++L+LIV V +F+I+T+L ++VMEK 
Sbjct: 242 VTQALGGYPFYSRNWMEMNANLFAALKLEKAAMSIMLTLIVLVGSFSIVTTLVMLVMEKS 301

Query: 295 GEVAILQTQGLTPR 308
            ++AI+ + G T  
Sbjct: 302 RDIAIMMSMGATKS 315



>gi|2313911|gb|AAD07831.1|   conserved hypothetical integral membrane protein [Helicobacter
           pylori 26695]
 gi|7463943|pir||C64618   conserved hypothetical integral membrane protein HP0787 -
           Helicobacter pylori (strain 26695)
 gi|15645406|ref|NP_207580.1|   conserved hypothetical integral membrane protein [Helicobacter
           pylori 26695]
          Length = 410

 Score =  217 bits (552), Expect = 6e-55
 Identities = 94/409 (22%), Positives = 187/409 (45%), Gaps = 12/409 (2%)

Query: 2   YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILG 61
            + +  F+  RY+R   +  F    + L+  G+ +GVM L+  +++MNG  +E +  +  
Sbjct: 3   NRSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFV 62

Query: 62  LMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
           +     L +       +++ +   K       +P      +++SA S+  GV+ G+D ++
Sbjct: 63  MNYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSK 122

Query: 122 K----DPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
           +    + L   L N+ + DL    +N+I+G+ L   L ++   +  +      + T +  
Sbjct: 123 EKRINEVLNDALKNINENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTE-LEPTGLTL 181

Query: 178 IPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
            P  + F + G F +     D   M   ++  S + R P G   G  ++   P+K   + 
Sbjct: 182 SPIMKRFTIKGDFDSGLKSYDMSYMYAGLQAISAIRRLPLGLYDGVHVYSKTPMKDIEIL 241

Query: 237 QQKLPE----GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
           +  L      G   + W  + G  F A+ +EK  + ++L LI+ +A+ NII+SL ++VM 
Sbjct: 242 RNALKTINHHGIGIEGWWQQNGNFFSAMELEKRALFIVLMLIILMASLNIISSLLMVVMN 301

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN--NLMPIIGVL 350
           ++ E+A+L + G + ++I   F   G   G+ G  LG  L  L    L+   ++ +   +
Sbjct: 302 RRKEIALLFSMGSSQKEIQKTFFYLGNIIGLGGVALGVVLAFLSMYLLSVFPIISLPADV 361

Query: 351 LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                LP+ +  +   +  + ++ I  LS+ YPS +A+       LR E
Sbjct: 362 YGINTLPLNLSLMDFTLTLIGSVIIVGLSSYYPSKKASTIDALSVLRNE 410



>gi|10038970|dbj|BAB13005.1|   hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11133481|sp|P57382|LOLC_BUCAI   Lipoprotein releasing system transmembrane protein lolC
 gi|25403589|pir||E84964   hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|15616906|ref|NP_240119.1|   hypothetical protein BU295 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 399

 Score =  216 bits (550), Expect = 1e-54
 Identities = 138/399 (34%), Positives = 235/399 (58%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MY+P++LFI LRY+       F + ++ LS IGI++   +L+ + S++NG E+  + NIL
Sbjct: 1   MYKPISLFIALRYLWNTHLPNFKKIITILSIIGISITTASLIIITSIINGSEKNFEKNIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             +P  I+++++  +   Q PE  +KL+ +  ++ + + ++++QS   +++  ++GID  
Sbjct: 61  SFIPHLIITNKNQCIKKDQFPENILKLNNIKNISDLISKEIIVQSKNDISMAEVIGIDHT 120

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
               +  Y +      L+PG YN+I+G+QLA +L V  GD+++++  S ++    G I  
Sbjct: 121 NYYNIHNYNIKSVLKTLKPGYYNIIIGKQLARKLNVFIGDRLKLIFLSNTKNFFSGEIFK 180

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
           QR F +I  F+   EVD Y++L+N ED+   + Y    +TGWR+WL  PL ++    +K+
Sbjct: 181 QRTFKIINFFSTKKEVDYYQILMNKEDSLNFLNYSKDYVTGWRVWLKNPLSLNVNEIKKI 240

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
                  DW  +KGELF+A+++EK +M L L L++ V+  NI+  L +  +EKQ  VAIL
Sbjct: 241 THPLFLLDWTTQKGELFKAMKIEKYIMFLFLFLVLLVSILNIVVILTICTVEKQNAVAIL 300

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
           QTQGL   +IM++F++ G+S  IIG ILG  +   L  Q + L   I + +D   +P+ +
Sbjct: 301 QTQGLLNCKIMLIFIIFGSSTAIIGNILGTLISLTLIIQNDFLKFFINIFIDETNIPIIV 360

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            P Q+  I +      +LSTLYPSW+A   +P+  L  E
Sbjct: 361 IPYQIFFINITITLFTILSTLYPSWKAIQLKPSRILSNE 399



>gi|24372410|ref|NP_716452.1|   ABC transporter, ATP-binding/permease protein [Shewanella
           oneidensis MR-1]
 gi|24346376|gb|AAN53897.1|   ABC transporter, ATP-binding/permease protein [Shewanella
           oneidensis MR-1]
          Length = 656

 Score =  216 bits (550), Expect = 1e-54
 Identities = 65/401 (16%), Positives = 133/401 (33%), Gaps = 42/401 (10%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI-LSSEHGSLNPQQ--- 79
           R  ++L+ +GI +G+ ++V+V+++  G +RE+  +I  +    I +    G  + +    
Sbjct: 273 RLRTFLTMLGIIIGIASVVSVVALGEGSQREILKSISSMGTNTIDIRPGLGFGDRRSARV 332

Query: 80  ------LPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                        L  V+ V P  +  V ++         + G+ P         L   +
Sbjct: 333 RTLTASDANALKNLPYVDSVTPSISSSVTVRLGNKAVTASVNGVGPEFFRVRGYELAQGQ 392

Query: 134 QTDLEPGK---YNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTF 190
             D +       + ++ +    QL     D    M     Q   +G +P      +IG  
Sbjct: 393 FWDDDSVDALAQDAVIDDNTRKQLF---PDSTGAMGSVIGQVIFLGDLP----VRIIGVT 445

Query: 191 AAN----SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDE--PLKVDS------LSQQ 238
                     D   + V     S  M      + G  + LDE  P           L  +
Sbjct: 446 KPKESAFGNSDALNVWVPYTTVSGRM-VGKKYLDGITVRLDESVPSNAAEQGIITLLKMR 504

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              +     +    +  + +       ++  +  + + V    ++  + + V E+  E+ 
Sbjct: 505 HGTQDFFTINTDTIRQNIEKTTATMTLLISAIAVISLVVGGIGVMNIMLVSVTERTREIG 564

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           +    G     I+  F+++     + G  LG AL  L+                G +  +
Sbjct: 565 VRMAVGARQSDILRQFLIEAVLVCLCGGALGVALAYLIGVVFAQA---------GGSFQM 615

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 ++     +  I +L    P+  AA   P EAL  E
Sbjct: 616 IYSTTSIVAAFACSTLIGVLFGFLPARNAARLDPVEALARE 656



>gi|32261866|gb|AAP76915.1|   conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
 gi|32265817|ref|NP_859849.1|   hypothetical protein HH0318 [Helicobacter hepaticus ATCC 51449]
          Length = 417

 Score =  216 bits (550), Expect = 1e-54
 Identities = 76/417 (18%), Positives = 177/417 (42%), Gaps = 21/417 (5%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
           + +  ++  RY+R      F    + L+  G+ +GVM L   +++MNG  +E +  +  +
Sbjct: 2   KTLIFYLLPRYLRFDKTQPFISITALLAFFGVGIGVMVLCVAMAIMNGMTKEFERKLSIM 61

Query: 63  MPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQK 122
                + S         + +           +P      V +   +++  ++ G+D   +
Sbjct: 62  NYPLSIYSTTYEGVDANILQALKAHFPQFLFSPYLRYQAVGKIGNTMSAAMVFGVDMQAE 121

Query: 123 DPLTPYLVNV-------------KQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSA 169
             +   +                        ++++++G+ +    G+  GD++ +     
Sbjct: 122 SQINAVVKKAFKTSQNSDTEFKKNIESFMQKEFSILIGKSMEENFGLESGDKLDLFFTQ- 180

Query: 170 SQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDE 228
            + +     P  + F++ G F +     D   +  N+    ++     G   G  ++   
Sbjct: 181 LEPSGFSYTPINKRFSIAGFFESGLRAYDEAYVYTNLSALQKIRHLNEGIYDGIHIYTPN 240

Query: 229 PLK----VDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIIT 284
           P++    +      + P  +  + W  + G  F A+ +EK  + ++L LI+ +AA NII+
Sbjct: 241 PMQDIHSISDFLNTQFPYRAGVEGWWQQNGNFFSALELEKRALFIVLMLIIVMAALNIIS 300

Query: 285 SLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNN-- 342
           SL ++VM ++ E+A+L + G + ++I  +F   G + G+ G  LG  L  +    L+   
Sbjct: 301 SLLMVVMNRRKEIALLLSLGASRQEIKSIFFWVGNTIGLSGIALGIILTGIAMYVLDTFP 360

Query: 343 LMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           ++ +   +   + LP+ +  +  ++  + A+ I  LS+ YP+ +A+     + LR E
Sbjct: 361 IISLPADVYGSSKLPLDLSLIDFLLTIIGAIFIVCLSSYYPARKASLVDTLQVLRNE 417



>gi|59801781|ref|YP_208493.1|   putative ABC transporter, ATP-binding protein [Neisseria
           gonorrhoeae FA 1090]
 gi|59718676|gb|AAW90081.1|   putative ABC transporter, ATP-binding protein [Neisseria
           gonorrhoeae FA 1090]
          Length = 644

 Score =  215 bits (547), Expect = 2e-54
 Identities = 59/398 (14%), Positives = 131/398 (32%), Gaps = 47/398 (11%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI-LSSEHGSLNPQ---- 78
           +  S L+ +GI +G+ ++V+V+++ NG ++++  +I  +    I +    G  + +    
Sbjct: 266 KMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKI 325

Query: 79  -----QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                   +   K   V    P+T+    L    +     + G+     D     L   +
Sbjct: 326 KTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGR 385

Query: 134 QTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTF 190
             D          V++ + +  +L  +            S       +  +R   VIG  
Sbjct: 386 LFDENDVKEDAQVVVIDQNVKDKLFAD------------SDPLGKTILFRKRPLTVIGVM 433

Query: 191 A----ANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK--------VDSLSQQ 238
                A    D   +          +     +     + + +            + L  +
Sbjct: 434 KKDENAFGNSDVLMLWSPYTTVMHQI-TGESHTNSITVKIKDNANTRVAEKGLAELLKAR 492

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              E     +    +  +       K ++  +  + + V    ++  + + V E+  E+ 
Sbjct: 493 HGTEDFFMNNSDSIRQMVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIG 552

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           I    G     I+  F+++     IIG ++G  L A ++   N+              P+
Sbjct: 553 IRMAIGARRGNILQQFLIEAVLICIIGGLVGVGLSAAVSLVFNH---------FVTDFPM 603

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            I    VI     +  I +     P+ +AA   P +AL
Sbjct: 604 DISAASVIGAVACSTGIGIAFGFMPANKAAKLNPIDAL 641



>gi|20091321|ref|NP_617396.1|   hypothetical protein MA2490 [Methanosarcina acetivorans C2A]
 gi|19916449|gb|AAM05876.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 392

 Score =  214 bits (546), Expect = 3e-54
 Identities = 92/401 (22%), Positives = 175/401 (43%), Gaps = 26/401 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
             LFI LR +  R         + LS   I L VM L    +VM GF  EL N  +  +P
Sbjct: 6   YELFIALRQIWARK------VQTLLSVGAIALAVMVLTVSQAVMVGFTGELYNTTVNKLP 59

Query: 65  QAILSSEHGSL---NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQ 121
              +S E G       + L E   K++GV  ++P   G    +   +     + G+ P +
Sbjct: 60  HVSVSPEEGEDYIYLYRTLIEDISKIEGVTAISPFLAGKASFRFKTNSLNAELKGVIPLE 119

Query: 122 KDPLTP---YLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           ++ ++     +V     +LE  +  V++G +LA +L VN G+ + V  P+A   +     
Sbjct: 120 ENEISSIESDMVEGDFRELEFSRNTVVIGSKLADKLEVNLGESVDVSFPNAKSLS----- 174

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
                  V+G F   S +D      +++ A      P   I G  + L +  +   ++ +
Sbjct: 175 -----LRVVGIFHTGSSLDESLTYTSLDTAQEFYDVP-DVINGISVRLADFNRDREVAAE 228

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
               G K + W +   E+ + + +E     + L LIV +A+F +I++L L V+    ++ 
Sbjct: 229 IRKTGYKVKGWTESNPEILRTIAIESTSNNVTLGLIVVIASFGVISTLNLSVISATSQIG 288

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL---MPIIGVLLDGAA 355
           +L+  G     I  +F++Q    G++GA+ G   G  ++  +           +      
Sbjct: 289 MLRAMGARVSSIRKIFILQSGILGLLGALGGTLTGVAISLAIGQYEIPGASSELYGGLTT 348

Query: 356 LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           +P+ +    +++I L    + L++ +YP+ +AA   P +A+
Sbjct: 349 IPIVVRIGDILLIILAVFLLNLIAGIYPAQQAAKLDPVKAI 389



>gi|56385102|gb|AAV85982.1|   MacB [Neisseria gonorrhoeae]
          Length = 644

 Score =  214 bits (545), Expect = 4e-54
 Identities = 59/398 (14%), Positives = 131/398 (32%), Gaps = 47/398 (11%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI-LSSEHGSLNPQ---- 78
           +  S L+ +GI +G+ ++V+V+++ NG ++++  +I  +    I +    G  + +    
Sbjct: 266 KMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKI 325

Query: 79  -----QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                   +   K   V    P+T+    L    +     + G+     D     L   +
Sbjct: 326 KTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGR 385

Query: 134 QTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTF 190
             D          V++ + +  +L  +            S       +  +R   VIG  
Sbjct: 386 LFDENDVKEDAQVVVIDQNVKDKLFAD------------SDPLGKTILFRKRPLTVIGVM 433

Query: 191 A----ANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK--------VDSLSQQ 238
                A    D   +          +     +     + + +            + L  +
Sbjct: 434 KKDENAFGNSDVLMLWSPYTTVMHQI-TGESHTNSITVKIKDNANTRVAEKGLAELLKAR 492

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              E     +    +  +       K ++  +  + + V    ++  + + V E+  E+ 
Sbjct: 493 HGTEDFFMNNSDSIRQMVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIG 552

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           I    G     I+  F+++     IIG ++G  L A ++   N+              P+
Sbjct: 553 IRMAIGARRGNILQQFLIEAVLICIIGGLVGVGLSAAVSLVFNH---------FVTDFPM 603

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            I    VI     +  I +     P+ +AA   P +AL
Sbjct: 604 DISAASVIGAVACSTGIGIAFGFMPANKAAKLNPIDAL 641



>gi|58696954|ref|ZP_00372446.1|   ABC transporter, permease protein [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58536811|gb|EAL60037.1|   ABC transporter, permease protein [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 364

 Score =  213 bits (544), Expect = 6e-54
 Identities = 98/366 (26%), Positives = 186/366 (50%), Gaps = 15/366 (4%)

Query: 47  VMNGFERELQNNILGLMPQAILS-SEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQS 105
           +MNGF  +L ++ILG+     +    + + +   + ++  ++ G+ +  P+T   V++ +
Sbjct: 1   MMNGFRAKLLDSILGIDGHINVYFDRNINSDYYAVSKSIERIPGILKATPMTNDQVIIVA 60

Query: 106 ARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVM 165
              +A  V+ G+        T    NV   D++     +I+G +LA  L V+ GD+I  +
Sbjct: 61  NGKIAGSVVRGVSTKDLLDSTAVTNNVIIGDVKKFDEGIIIGARLAEALNVDYGDEITFI 120

Query: 166 VPSASQFTPMGRIPSQRLFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRL 224
                    +G +P  + + VI  F     E D   + + ++ A     Y   +I    +
Sbjct: 121 SSEE-FDALLGEMPRMKKYKVIAIFDMGMFEYDNTLIYMPLKSAQAFFNYK-NSIKNIEV 178

Query: 225 WLDEPLKVDSLSQQKLPE-GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNII 283
            +D+  + D L+     E G + + W+ ++   F A++ E+N+M L+L+LI+ VAAFNII
Sbjct: 179 LVDDVTRADKLADAIEKEIGMEAESWQSQQSHYFSALKTERNVMFLILTLIIVVAAFNII 238

Query: 284 TSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL 343
           ++L ++V EK+  +AI++T G T   IM +F   G   G  G  LG  +G + +  + ++
Sbjct: 239 SNLMMIVQEKKSAIAIMRTFGATSGSIMRIFCACGLLIGFTGTCLGCIIGVVFSLNIESI 298

Query: 344 MPII----------GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPA 393
              +           ++   ++LPV + P  V+ I+ +A+ ++ L+T+ P+ +AAA  PA
Sbjct: 299 RVFLENITNVKLFDPMIYFFSSLPVILVPQDVVNISALALLLSFLATIAPALQAAAQDPA 358

Query: 394 EALRYE 399
           E LRYE
Sbjct: 359 EILRYE 364



>gi|7379451|emb|CAB84013.1|   putative ABC transporter ATP-binding protein [Neisseria
           meningitidis Z2491]
 gi|15793705|ref|NP_283527.1|   ABC transporter ATP-binding protein [Neisseria meningitidis Z2491]
 gi|11278931|pir||C81916   probable ABC transporter ATP-binding protein NMA0729 [imported] -
           Neisseria meningitidis (strain Z2491 serogroup A)
          Length = 644

 Score =  213 bits (542), Expect = 9e-54
 Identities = 59/398 (14%), Positives = 132/398 (33%), Gaps = 47/398 (11%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI-LSSEHGSLNPQ---- 78
           +  S L+ +GI +G+ ++V+V+++ NG ++++  +I  +    I +    G  + +    
Sbjct: 266 KMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRI 325

Query: 79  -----QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                   +   K   V    P+T+    L    +     + G+     D     L   +
Sbjct: 326 KTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGR 385

Query: 134 QTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTF 190
             D          V++ + +  +L  +            S       +  +R   VIG  
Sbjct: 386 LFDENDVKEDAQVVVIDQNVKDKLFAD------------SDPLGKTILFRKRPLTVIGVM 433

Query: 191 A----ANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV--------DSLSQQ 238
                A    D   +          +     +     + + +            D L  +
Sbjct: 434 KKDENAFGNSDVLMLWSPYTTVMHQI-TGESHTNSITVKIKDNANTQVAEKGLTDLLKAR 492

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              E     +    +  +       K ++  +  + + V    ++  + + V E+  E+ 
Sbjct: 493 HGTEDFFMNNSDSIRQIVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIG 552

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           I    G     I+  F+++     +IG ++G  L A ++   N+              P+
Sbjct: 553 IRMAIGARRGNILQQFLIEAVLICVIGGLVGVGLSAAVSLVFNH---------FVTDFPM 603

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            I  + VI     +  I +     P+ +AA   P +AL
Sbjct: 604 DISAMSVIGAVACSTGIGIAFGFMPANKAAKLNPIDAL 641



>gi|7225775|gb|AAF40978.1|   ABC transporter, ATP-binding protein [Neisseria meningitidis MC58]
 gi|11278933|pir||C81187   ABC transporter, ATP-binding protein NMB0549 [imported] - Neisseria
           meningitidis (strain MC58 serogroup B)
 gi|15676455|ref|NP_273594.1|   ABC transporter, ATP-binding protein [Neisseria meningitidis MC58]
          Length = 644

 Score =  212 bits (541), Expect = 1e-53
 Identities = 59/398 (14%), Positives = 132/398 (33%), Gaps = 47/398 (11%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI-LSSEHGSLNPQ---- 78
           +  S L+ +GI +G+ ++V+V+++ NG ++++  +I  +    I +    G  + +    
Sbjct: 266 KMRSLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRI 325

Query: 79  -----QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                   +   K   V    P+T+    L    +     + G+     D     L   +
Sbjct: 326 KTLTIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGR 385

Query: 134 QTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTF 190
             D          V++ + +  +L  +            S       +  +R   VIG  
Sbjct: 386 LFDENDVKEDAQVVVIDQNVKDKLFAD------------SDPLGKTILFRKRPLTVIGVM 433

Query: 191 A----ANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV--------DSLSQQ 238
                A    D   +          +     +     + + +            D L  +
Sbjct: 434 KKDENAFGNSDVLMLWSPYTTVMHQI-TGESHTNSITVKIKDNANTQVAEKGLTDLLKAR 492

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              E     +    +  +       K ++  +  + + V    ++  + + V E+  E+ 
Sbjct: 493 HGTEDFFMNNSDSIRQIVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIG 552

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           I    G     I+  F+++     +IG ++G  L A ++   N+              P+
Sbjct: 553 IRMAIGARRGNILQQFLIEAVLICVIGGLVGVGLSAAVSLVFNH---------FVTDFPM 603

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
            I  + VI     +  I +     P+ +AA   P +AL
Sbjct: 604 DISAMSVIGAVACSTGIGIAFGFMPANKAAKLNPIDAL 641



>gi|28900079|ref|NP_799734.1|   putative ABC transporter, ATP-binding protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|28808362|dbj|BAC61567.1|   putative ABC transporter, ATP-binding protein [Vibrio
           parahaemolyticus RIMD 2210633]
          Length = 654

 Score =  210 bits (536), Expect = 4e-53
 Identities = 56/394 (14%), Positives = 135/394 (34%), Gaps = 39/394 (9%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLNPQ----- 78
           R  ++L+ +GI +G+ ++V+V+++ NG ++++ +NI  +    I          +     
Sbjct: 276 RMRTFLTMLGIIIGIASVVSVVALGNGSQQQILSNISSMGTNTIDVRPGKGFGDRRSGRV 335

Query: 79  -----QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                   ++   L  V+ V P  +  + ++ A   A   + G+           +   +
Sbjct: 336 KTLTADDAKSLESLPFVDSVTPSLSNSLTVRYANQDATASVEGVGEDYFRVRGYEIAKGQ 395

Query: 134 QTDLEPG---KYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTF 190
             D E         ++ +    ++  +R     V+   +     +G    +         
Sbjct: 396 FWDEESVNSLAQEAVIDDNTRKEMFADRNPIGEVIFLGSLPVRIVGVTQKKE-------- 447

Query: 191 AANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL--------PE 242
            A    D  ++ V     S  M      + G  + +DE     ++ Q  +         E
Sbjct: 448 DAFGNSDALKIWVPYTTMSGRM-MGQRYLNGITVRIDENAPSAAVEQSIINLLKMRHGTE 506

Query: 243 GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQT 302
                +    +  + +       ++  +  + + V    ++  + + V E+  E+ +   
Sbjct: 507 DFFTINTDTIRQSIEKTTATMTLLISAIAVISLIVGGIGVMNIMLVSVTERTKEIGVRMA 566

Query: 303 QGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEP 362
            G     I+  F+++     + G I G  L  L+    +           G++  +    
Sbjct: 567 VGARQADILRQFLIEAVLVCLCGGIAGIGLAFLIGFAFST---------SGSSFQMIYSM 617

Query: 363 LQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             +I   + +  I +     P+  AA   P EAL
Sbjct: 618 NSIIWAFICSTLIGIAFGFLPARNAAKLDPIEAL 651



>gi|30249852|ref|NP_841922.1|   DUF214 [Nitrosomonas europaea ATCC 19718]
 gi|30180889|emb|CAD85811.1|   DUF214 [Nitrosomonas europaea ATCC 19718]
          Length = 407

 Score =  210 bits (536), Expect = 5e-53
 Identities = 79/420 (18%), Positives = 151/420 (35%), Gaps = 58/420 (13%)

Query: 16  GRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHG-- 73
              A +  R  + L+ +G+ +GV A+V +LS+  G +  + + I  +    ++       
Sbjct: 10  ATRALQTNRLRTALTMLGMIIGVAAVVLMLSIGQGAQTSINSAIASMGSHLLIVMPGATS 69

Query: 74  -----------SLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQK 122
                           Q      +L  V+  AP+ +G   L    +    V+ G+ P   
Sbjct: 70  SGGLRWGSGSVKTLTVQDAHAIAELPMVDATAPVISGTAQLNYGANNWSTVLTGVTPDYF 129

Query: 123 DPLTPYLVNV---KQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
                 + +     + DL  G    +LG+  A+ L             +      + RI 
Sbjct: 130 SVNNWEMADGEIFTEGDLRSGTRVAVLGQITANSL-----------FGNEDPVGKIVRIA 178

Query: 180 SQRLFNVIGTFAANSEV-----DGYEMLVNIEDASR--LMRYPAGNITGWRLWLDEPLKV 232
           + R F V+G   A  +          + + +  A R  +     G+I    +       +
Sbjct: 179 N-RPFTVVGVLVAKGQSLSGRDQDDNVFIPLTTAQRQIIGNQFPGSINHMTVRAKTADSM 237

Query: 233 DSLSQQK-------------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAA 279
           ++   +              +      ++            R+   M+G + S+ + V  
Sbjct: 238 EAAEAEITRLLRQRHRISAHMENDFTVRNLTALASVASNTARVMAWMLGAVASVSLLVGG 297

Query: 280 FNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQ 339
             I+  + + V E+  E+ I    G   R I+  F+++     I+G I G ALG   A  
Sbjct: 298 IGIMNIMLVSVTERTREIGIRMAIGANQRMILTQFLLESLMICILGGITGIALGIGGAWL 357

Query: 340 LNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            + +          A L + I P  + +    +  I +   LYP+ +AAA +P EALR+E
Sbjct: 358 ASRI----------AELEIVITPGMIALAFSFSSIIGIFFGLYPARKAAALKPVEALRHE 407



>gi|23468969|ref|ZP_00124304.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Pseudomonas syringae pv. syringae B728a]
          Length = 657

 Score =  210 bits (536), Expect = 5e-53
 Identities = 60/418 (14%), Positives = 132/418 (31%), Gaps = 53/418 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A+    R M          F + L+ +GI +GV ++V +L+V  G +R++   +      
Sbjct: 269 AIRAAWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSN 322

Query: 66  AIL--------SSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGI 117
            I          +  G +  +++     +L  V  + P+  G   ++         + G 
Sbjct: 323 IIYLNGKAPNPRAPKGVITLEEVAA-LGELPEVKMIMPVNGGQAGVRYGNLDHSSYVGGN 381

Query: 118 DPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTP 174
           D          +V        D +      ++G ++  +L   + D +            
Sbjct: 382 DTHFPAIFNWPVVEGSYFSEADEQNAAAVAVIGYKVRQKLFGEQSDPV-----------G 430

Query: 175 MGRIPSQRLFNVIGTF-----AANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLW-LD 227
              +     F V+G        +        + +    AS RL                +
Sbjct: 431 QYILIENVPFQVVGVLQEKGATSGDLDSDNRIAIPYSSASIRLFGTQDPEYITIATRDAN 490

Query: 228 EPLKVDSLSQQKL------PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFN 281
              + +   +  L       +  +  +         +       M+G + ++ + V    
Sbjct: 491 NVKQAEQSIRNLLQQLHHGKQDYELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIG 550

Query: 282 IITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN 341
           ++  + + V E+  E+ I    G     I+  F+ +     ++G + G  L   + + L 
Sbjct: 551 VMNIMLMTVRERTREIGIRMATGARQSDILRQFLTEAVMLSVVGGLAGIVLALGMGAAL- 609

Query: 342 NLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                       + + VA     V      A+   ++    P+ +AA   P  AL  E
Sbjct: 610 ----------LLSKVAVAFTLPAVAGAFACALITGVIFGFMPARKAARLDPVAALTSE 657



>gi|26990902|ref|NP_746327.1|   ABC export system, permease/ATP-binding protein, putative
           [Pseudomonas putida KT2440]
 gi|24985917|gb|AAN69791.1|   ABC export system, permease/ATP-binding protein, putative
           [Pseudomonas putida KT2440]
          Length = 654

 Score =  210 bits (534), Expect = 8e-53
 Identities = 58/417 (13%), Positives = 139/417 (33%), Gaps = 51/417 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           +L    R M          F + L+ +GI +GV ++V +L+V  G +R++   +      
Sbjct: 266 SLQAAWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMAAFGSN 319

Query: 66  AILSSEHGSLNPQ-------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
            +  +       +              +L  V  + P+    ++++   +     + G +
Sbjct: 320 ILYLNGSPPTLREPAGRITLDDVAAIGELPQVKHIMPVLGEKMMVRHGNNSQQFYVGGNN 379

Query: 119 PAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPM 175
               +      V        D        ++G+++  +           M+   S     
Sbjct: 380 TFFPEIFNWPAVEGSFFTETDEASSAAVAVIGQKVREK-----------MLAPGSNPIGQ 428

Query: 176 GRIPSQRLFNVIGTF-----AANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLD-E 228
             +     F V+G       ++  +     ++V    A+ RL  +   +          +
Sbjct: 429 YLLIGNVPFQVVGILAGKGASSGDQDSDGRIVVPFSAAAIRLFGHRDPDYIAIAARDSGQ 488

Query: 229 PLKVDSLSQQKLPE------GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNI 282
               ++   + L +        +  +         +       M+G + ++ + V    +
Sbjct: 489 VKDTEAAIDRLLRQRHQGKHDFELTNDAALIQAEARTQNSLSLMLGAIAAISLLVGGIGV 548

Query: 283 ITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNN 342
           +  + + V E+  E+ I    G   R I+  F+ +     ++G + G AL  ++ + L  
Sbjct: 549 MNIMLMTVRERTREIGIRMATGARQRDILRQFLSEAIMLSMVGGLTGIALALVVGASLT- 607

Query: 343 LMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                      A + VA     ++     A+   ++    P+ +AA   P +AL  E
Sbjct: 608 ----------LADIAVAFALPAIVGAFACAVITGVVFGFMPARKAARLDPVKALTSE 654



>gi|15669701|ref|NP_248514.1|   hypothetical protein MJ1507 [Methanocaldococcus jannaschii DSM
           2661]
 gi|1592141|gb|AAB99519.1|   hypothetical protein MJ1507 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2128904|pir||B64488   hypothetical protein MJ1507 - Methanococcus jannaschii
 gi|2496185|sp|Q58902|YF07_METJA   Hypothetical protein MJ1507
          Length = 399

 Score =  210 bits (534), Expect = 9e-53
 Identities = 70/407 (17%), Positives = 156/407 (38%), Gaps = 42/407 (10%)

Query: 15  RGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI------- 67
                 +  R  S L+ IGI +GV+A+V+++S+  G +  +   ++ +    I       
Sbjct: 13  FAFKNIKQKRTQSLLTIIGIVIGVLAMVSLISLGYGVQNYIHEEMMKMGSNKITILPMKQ 72

Query: 68  LSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPL-- 125
                  L  ++  +    + GV+ V     G   ++              P++   +  
Sbjct: 73  FGVPPSHLFTKKEIKAIKNVKGVDTVMYGWYGGCEIEYNGEKKFVSYYYAIPSKLREVYK 132

Query: 126 -TPYLVNVKQTDLEPGKYNVILGEQLASQLG---VNRGDQIRVMVPSASQFTPMGRIPSQ 181
            + Y +   +   +  KY  ++G   A  L    +  GD I++                 
Sbjct: 133 DSGYDIEEGRWLEDNDKYACVIGYGTAHNLFDREIKVGDVIKI---------------KD 177

Query: 182 RLFNVIGTFAA-NSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
           + F V+G      ++ D   +++NI+   +L     G      + + E   ++ +S++  
Sbjct: 178 KKFRVVGILKQIGNQQDDNSIILNIDVGEKLFG-NEGKYNFISVTVKEGEDIEKVSEEIK 236

Query: 241 P--------EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVME 292
                    E             +   + +    +  + ++ + V A  I  ++ + ++E
Sbjct: 237 KALKKSFGDEDFSVLTAEQLAKTVSSVLGVITIFVVGVAAISLLVGAVGISNTMHMSILE 296

Query: 293 KQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLD 352
           ++ ++ IL+  G     I+ +F+V+    G+ G I+G  LG LLA  +  L   +G L  
Sbjct: 297 RRKDIGILKALGAETTDILAIFVVESGFLGLFGGIVGLVLGILLAEVIEALAHKMGYL-- 354

Query: 353 GAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +   I    ++ + + +  + ++S  +P+   A   P E LR E
Sbjct: 355 --MVNAWISWELIVGVLIFSFLVGVISGYFPARSGAKLNPIETLRGE 399



>gi|34762631|ref|ZP_00143624.1|   Lipoprotein releasing system transmembrane protein lolE
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|27887711|gb|EAA24787.1|   Lipoprotein releasing system transmembrane protein lolE
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
          Length = 389

 Score =  210 bits (534), Expect = 9e-53
 Identities = 101/405 (24%), Positives = 184/405 (45%), Gaps = 27/405 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
           +  FI  + M  R         S LS +G+ +G+  L+  L V NG ++ + N+IL L  
Sbjct: 2   IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55

Query: 65  QAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARS----VAVGVMLGIDPA 120
              + S     + +++ +    + GV  V P      +++        VA   ++G D  
Sbjct: 56  HITVYSPENISDYEEISKEIETIKGVKGVVPTIETQGIVKYEGGIEPYVAGVKVVGYDLE 115

Query: 121 QKDPLTPYLVNVKQTDLE-PGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
           +          +    ++   K  V++G +LA   G   GD+I+++    +         
Sbjct: 116 KAVKTMNLDKYIIDGKIDLEDKKGVLIGNELAKATGATVGDKIKLITSEETDL------- 168

Query: 180 SQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS-- 236
                NV+G F +   E D   +L+ +  A   + Y    +    + LD P     L   
Sbjct: 169 ---EMNVVGIFQSGFYEYDINMVLIPLTTAQ-YITYSDSTVGRLSVRLDNPYDAQKLVID 224

Query: 237 -QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
             +KLPE      W ++   L  A+ +EK +M ++ SLI  VA F I  +L  +V EK  
Sbjct: 225 VARKLPETYFIGTWGEQNKALLSALTLEKTIMLVVFSLIAIVAGFLIWITLNTLVREKTK 284

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL-NNLMPIIGVLLDGA 354
           ++ I++  G + + IM++F++QG   GIIG ILG  +  +L   + N  + ++  +    
Sbjct: 285 DIGIMRAMGFSKKNIMLIFLIQGIILGIIGIILGIIVSLILLYYIKNYAVDLVSNIYYLK 344

Query: 355 ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            +P+ I   ++ +I      + L+S+++P++RAA  +  EALRYE
Sbjct: 345 DIPIEISLKEIAIIVGANFIVILISSIFPAYRAARLENVEALRYE 389



>gi|19703916|ref|NP_603478.1|   Lipoprotein releasing system transmembrane protein lolE
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|19714086|gb|AAL94777.1|   Lipoprotein releasing system transmembrane protein lolE
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 389

 Score =  209 bits (532), Expect = 1e-52
 Identities = 100/405 (24%), Positives = 183/405 (45%), Gaps = 27/405 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
           +  FI  + M  R         S LS +G+ +G+  L+  L V NG ++ + N+IL L  
Sbjct: 2   IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55

Query: 65  QAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARS----VAVGVMLGIDPA 120
              + S     + +++ +    + GV  V P      +++        VA   ++G D  
Sbjct: 56  HITVYSPENISDYEEISKDIETIKGVKGVVPTIETQGIVKYEGGIEPYVAGVKVVGYDLE 115

Query: 121 QKDPLTPYLVNVKQTDLE-PGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
           +          +    ++   K  +++G +LA   G   GD+I+++    +         
Sbjct: 116 KAVKTMNLDKYIIDGKIDLEDKKAILIGNELAKATGAKVGDKIKLITSEETDL------- 168

Query: 180 SQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS-- 236
                NV G F +   E D   +L+ +  A   + Y    +    + LD P     L   
Sbjct: 169 ---EMNVAGIFQSGFYEYDINMVLIPLTTAQ-YITYSDNTVGRLSVRLDNPYNAQKLVID 224

Query: 237 -QQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQG 295
             +KLPE      W ++   L  A+ +EK +M ++ SLI  VA F I  +L  +V EK  
Sbjct: 225 VARKLPETFYIGTWGEQNKALLSALTLEKTIMLVVFSLIAIVAGFLIWITLNTLVREKTK 284

Query: 296 EVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL-NNLMPIIGVLLDGA 354
           ++ I++  G + + IM++F++QG   GIIG ILG  +  +L   + N  + ++  +    
Sbjct: 285 DIGIMRAMGFSKKNIMLIFLIQGIILGIIGIILGIIVSLILLYYIKNYAVDLVSNIYYLK 344

Query: 355 ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            +P+ I   ++ +I      + L+S+++P++RAA  +  EALRYE
Sbjct: 345 DIPIEISLKEIAIIVGANFIVILISSIFPAYRAARLENVEALRYE 389



>gi|46311285|ref|ZP_00211894.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Burkholderia cepacia R18194]
          Length = 689

 Score =  208 bits (531), Expect = 2e-52
 Identities = 52/394 (13%), Positives = 135/394 (34%), Gaps = 38/394 (9%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI-LSSEHGSLNPQQLP- 81
           R  + L+ +GI +G+ ++V+++++  G +R + + I  +    I +       + +    
Sbjct: 310 RLRTLLTMLGIIIGITSVVSIVAIGEGAKRYMLDEIGSIGTNTINIYPGTDWGDSRADAI 369

Query: 82  --------ETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                       +   V+   P T+  ++L+        ++ G+                
Sbjct: 370 QTLVPADVAALTEQPYVDSATPETSRTLLLRYRNVDVNALVSGVGDRFFQARGMRFALGV 429

Query: 134 QTDLEPGKYNV---ILGEQLASQLGVNRGDQI-RVMVPSASQFTPMGRIPSQRLFNVIGT 189
             D +  +  V   ++ +    +L     + I  V++        +G    ++       
Sbjct: 430 AFDEDAVRRQVQVAVIDQNTRRKLFGATRNPIGEVILVDNVPCVVIGVTADKK------- 482

Query: 190 FAANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLDEPLKVDS------LSQQKLPE 242
            +A   V    + V    AS RL      +    R+   +P           ++Q+   +
Sbjct: 483 -SAFGSVKSLNVWVPYTTASGRLFGQRYLDSITVRVRDGQPSAAAEKSLEKLMTQRHGRK 541

Query: 243 GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQT 302
                +       + +  +    ++ L+  + + V    ++  + + V E+  E+ I   
Sbjct: 542 DFFTYNMDSVVKTVEKTGQSLTLLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIRMA 601

Query: 303 QGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEP 362
            G     I+  F+V+     ++G  +G AL   L +  +         +  A   +    
Sbjct: 602 VGARQSDILQQFLVEAVLVCLLGGTIGIALSFGLGALFS---------MFVAQWKMVFSA 652

Query: 363 LQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             ++   + +    ++    P+  A+   P +AL
Sbjct: 653 GAIVTAFVCSTLTGVIFGFMPARNASRLDPIDAL 686



>gi|21672562|ref|NP_660629.1|   hypothetical 43.3 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|21623189|gb|AAM67840.1|   hypothetical 43.3 kD protein in mfd-cobB [Buchnera aphidicola str.
           Sg (Schizaphis graminum)]
 gi|25008722|sp|Q8K9N8|LOLC_BUCAP   Lipoprotein releasing system transmembrane protein lolC
          Length = 399

 Score =  208 bits (530), Expect = 3e-52
 Identities = 124/399 (31%), Positives = 234/399 (58%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MY+P+ +FIGLRY+       F + +  LS +GI +G+ + +  +S+MNGF+ + +N+IL
Sbjct: 1   MYKPIYIFIGLRYLWNPYLPNFKKIIIILSILGIGIGISSTIITISIMNGFQNKFKNDIL 60

Query: 61  GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             +P  I+++++ ++N    P+  +KL  V  +    +  V++++   + +G ++GI+  
Sbjct: 61  SFIPHIIITNKNRNINKLNFPKETLKLKNVEEITDFISKKVIIENKNEINIGEIIGINIK 120

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
            +  L  Y +      L   KYN I+G +LA ++ VN  DQI+++V   S+   +    +
Sbjct: 121 NEKNLENYNIKKFLHTLHSRKYNAIIGSELAKKMHVNINDQIKLIVLPISKKKFLQNDLN 180

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
            +LF + G F+ NSE+D Y++L+N ++A   + Y    ITGW++ L +P  ++    +KL
Sbjct: 181 IKLFKITGIFSTNSEIDEYQILINKKNALNFLNYNKNYITGWKIKLKDPFILNIQKIKKL 240

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
            +     DW+ +KGELF+A+++EK +M     LI+ V++FNI+ SL + V++K+  ++I 
Sbjct: 241 NKNFIILDWKTKKGELFKAMKIEKYIMLFFFILILLVSSFNIVISLTMNVLDKKNNISIF 300

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
           Q+QGL+  +IM++F++ G++  I+G   G  +  +L  Q + L  +I +      +P+ I
Sbjct: 301 QSQGLSRYKIMLIFIILGSTISIVGNSFGTIISIILIFQKDFLNFLIKIFFIDIEIPIEI 360

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +Q++ I +  + + +LSTLYP W A  + P+  L  E
Sbjct: 361 SLIQILTINITFIFLTILSTLYPIWYAIKSTPSRILSDE 399



>gi|25166055|dbj|BAC24246.1|   ycfU [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
 gi|32490849|ref|NP_871103.1|   hypothetical protein WGLp100 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
          Length = 401

 Score =  207 bits (528), Expect = 4e-52
 Identities = 132/402 (32%), Positives = 228/402 (56%), Gaps = 4/402 (0%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           MY+PV L+IG+RY+   + +++ +F SW+S + I +G  +L+ + SV+ GFE +L+  +L
Sbjct: 1   MYKPVFLYIGIRYIICNSFNKYNKFTSWISFLSIVIGTSSLILITSVIQGFELDLEKYML 60

Query: 61  GLMPQAILSSEHGSLNPQQLP--ETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
             +P  IL S       +     E       +N+V+   + +V++QS  ++  G + G++
Sbjct: 61  KFIPHVILYSNDNFYEKKNRIKYELNKNCSEINQVSEFISTNVIIQSNYNLNYGNVFGVN 120

Query: 119 PAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
              +D     +   K   L P +Y +ILG +LA  L V +  +IR++    + FT +G +
Sbjct: 121 IEDEDQFLNSIGKKKIEKLLPDQYGIILGYELAKSLNVYKNSKIRMIFIEKNNFTILGPV 180

Query: 179 PSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSL-SQ 237
           P+QR+F VI  F  NSEVD Y++L+N +D  ++M+        WRLWL  PL+++     
Sbjct: 181 PTQRVFTVIDIFHTNSEVDQYQILMNKKDLKKIMKNNFEYKYNWRLWLKHPLEINKSCII 240

Query: 238 QKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
              P    ++DWR+ KG+LF A+ +EKN+M L LSLI+ ++ FNI  S+ + +++K+ E+
Sbjct: 241 SCFPGNYNYKDWREDKGDLFNAINIEKNVMFLFLSLIIILSIFNIFISISIEIIQKKKEI 300

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALP 357
           AIL+T G     I   F++ G+   IIG I+G  LG  ++S LNN++  + ++ D    P
Sbjct: 301 AILKTYGFNKISIFFTFIIYGSLISIIGTIIGTILGVFISSNLNNILFKLNIINDFIFFP 360

Query: 358 VAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             I    +  I L  +   ++S +YPS++A     ++ L+YE
Sbjct: 361 -KINYFYIFKINLFFIIFTIISIIYPSYKAVMINSSKTLKYE 401



>gi|53713160|ref|YP_099152.1|   ABC transporter permease protein [Bacteroides fragilis YCH46]
 gi|60492856|emb|CAH07631.1|   putative permease component of ABC transporter [Bacteroides
           fragilis NCTC 9343]
 gi|60681422|ref|YP_211566.1|   putative permease component of ABC transporter [Bacteroides
           fragilis NCTC 9343]
 gi|52216025|dbj|BAD48618.1|   ABC transporter permease protein [Bacteroides fragilis YCH46]
          Length = 406

 Score =  207 bits (526), Expect = 6e-52
 Identities = 65/433 (15%), Positives = 142/433 (32%), Gaps = 61/433 (14%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M       I LR +            ++L+ +GI +GV +++T+L++  G ++ +Q  I 
Sbjct: 1   MNGTNLFKIALRALNNNK------LRAFLTMLGIIIGVASVITMLAIGQGSKKSIQAQIS 54

Query: 61  GLMPQAILSSEHG--------------SLNPQQLPETAVKLDGVNRVAPITTGDVVLQSA 106
            +    I+                   +L          +   +  V+P  +    L + 
Sbjct: 55  EMGSNMIMIHPGADMRGGVRQDPSAMQTLKLTDYETLRDETSFLAAVSPNVSSSGQLIAG 114

Query: 107 RSVAVGVMLGIDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIR 163
            +     + G+     +     + N +     D++      ++G+ +   L         
Sbjct: 115 NNNYPSSVNGVGTEYLEIRQLSIDNGEMFSEADIQSSAKVCVIGKTIVDNL--------- 165

Query: 164 VMVPSASQFTPMGRIPSQRLFNVIGTFAA------NSEVDGYEMLVNIEDASRLMRYPAG 217
              P            S+  F V+G   +        + D   +        RL+     
Sbjct: 166 --FPDGEDPVGRIVRFSKIPFRVVGVLKSKGYNSMGMDQDDIVLAPYTTVMKRLLAQTYL 223

Query: 218 N-ITGWRLWLDEPLKVDSLSQQKLP----------EGSKWQDWRDRKGELFQAVRMEKNM 266
             I    L  D          + L           +    +  ++    L     +   +
Sbjct: 224 QGIYASALSEDMTDNATEEITELLRRNHKLKEADDDDFTIRSQQELSSMLNSTTDLMTTL 283

Query: 267 MGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGA 326
           +  +  + + V    I+  + + V E+  E+ +  + G     I+  F+++     I G 
Sbjct: 284 LACIAGISLVVGGIGIMNIMYVSVTERTREIGLRMSVGARGVDILSQFLIEAILISITGG 343

Query: 327 ILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWR 386
           ++G  +G   +  + ++          A  P+ I+P  V +   V     +    YP+ +
Sbjct: 344 LIGVIIGCGASWVVKSV----------AHWPIFIQPWSVFLSFAVCTVTGVFFGWYPAKK 393

Query: 387 AAATQPAEALRYE 399
           AA   P EA+RYE
Sbjct: 394 AADLDPIEAIRYE 406



>gi|20089338|ref|NP_615413.1|   hypothetical protein MA0447 [Methanosarcina acetivorans C2A]
 gi|19914229|gb|AAM03893.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 403

 Score =  206 bits (525), Expect = 8e-52
 Identities = 73/401 (18%), Positives = 151/401 (37%), Gaps = 41/401 (10%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAI-LSSEHGSLNPQQLPE 82
           +  S L+ +GI +GV A++  +S+   F +   N +  L    I +      L      +
Sbjct: 19  KMRSTLTVLGIVIGVAAVIANVSLGASFNQHFTNEVSNLGSNFIYIQGMQPKLFYDNQLK 78

Query: 83  TAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKY 142
                 G++ V+P+ +    +         ++ G+  A  D +    +       +  +Y
Sbjct: 79  IVENTPGISGVSPLKSQAAEVTYMSETKSIMVSGVGEAY-DEVANTQIGKGTFINDNDRY 137

Query: 143 NVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEV------ 196
             I+G  +A++     G  + V       F         + F V G              
Sbjct: 138 VAIVGYDIANE---KFGRNLSVRNSIDMTFRVGEDEKITKTFKVKGIIQNPENTMVQAYN 194

Query: 197 DGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ------------------ 238
           D   +L+ I+  + ++     +  G     ++P  +   S +                  
Sbjct: 195 DNEAILIPIDVMNEILG--EKDYGGVFAMAEDPAAIQETSDEVDRRLARSFGISERELDD 252

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
           K        +  +   +         + +  +  + + V +  I+  + + V E+  E+ 
Sbjct: 253 KDSRPYMLVNQAEILEQTDMMAAALSSFLTAVALISLLVGSIGIMNIMLVSVTERTREIG 312

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           +L++ G T   I+ +FMV+    G+ G ILG A+G   A  + +L+           LPV
Sbjct: 313 VLKSLGFTGFDILFLFMVESILLGVFGGILGGAVGIAGAYSVESLLN----------LPV 362

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 +    +VA+A+  +S +YP+ +AA  +P ++LRYE
Sbjct: 363 VFPLSLIFAGFIVAVAVGFVSGVYPARKAAKMKPVDSLRYE 403



>gi|60280008|gb|AAX16350.1|   PA2390 [Pseudomonas aeruginosa]
          Length = 663

 Score =  204 bits (520), Expect = 3e-51
 Identities = 64/416 (15%), Positives = 135/416 (32%), Gaps = 56/416 (13%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A+    R M          F + L+ +GI +GV ++V +L+V  G +R++   +      
Sbjct: 276 AVRAAWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSN 329

Query: 66  AILSSEHGS-------LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
            I  S +         +           L  V +V P+  G++V++         + G +
Sbjct: 330 IIYLSGYSPNPRAPMGIVSSDDVAAIATLPQVKKVMPVNGGELVVRYGNIDYHAYVGGNN 389

Query: 119 PAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPM 175
               + L   +         D +      ++G ++  +L              ++     
Sbjct: 390 TDFPEILNWPVAEGSYFTERDEDAATTVAVIGYKVRKKLF------------GSANPIGR 437

Query: 176 GRIPSQRLFNVIGTF-----AANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLDEP 229
             +     F VIG       ++  +     + +    AS RL            +   + 
Sbjct: 438 YILIENVPFQVIGVLAEKGSSSGDKDADNRIAIPYSAASIRLFGTRNPEY--VIIAAADA 495

Query: 230 LKVDSLSQQK---------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
            +V    +                +  +         +       M+G + ++ + V   
Sbjct: 496 QRVHQAERAIDQLMLRLHRGQRDYELTNNAAMIQAEAKTQNTLSLMLGSIAAISLLVGGI 555

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     I+  F+ + A   ++G + G AL        
Sbjct: 556 GVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVGGLAGIALAL------ 609

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                 IG +L    + VA     ++     A+   L+    P+ +AA   P  AL
Sbjct: 610 -----CIGGVLLLGQVAVAFSLSAIVGAFSCALVTGLVFGFMPARKAAQLDPVAAL 660



>gi|48731879|ref|ZP_00265623.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Pseudomonas fluorescens PfO-1]
          Length = 657

 Score =  204 bits (520), Expect = 4e-51
 Identities = 61/413 (14%), Positives = 135/413 (32%), Gaps = 51/413 (12%)

Query: 10  GLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAIL- 68
             R M          F + L+ +GI +GV ++V +L+V  G +R++   +       I  
Sbjct: 273 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYL 326

Query: 69  ------SSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQK 122
                       +           L  + R+ P+   +  ++      +  + G D    
Sbjct: 327 SGAAPNPRTPPGIVTLDEVAALASLPQITRIMPVNGAEAGVRFGNLDHMSYIGGNDTNFP 386

Query: 123 DPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIP 179
           +     +V        D   G    ++G+++  +L  +  + I               + 
Sbjct: 387 EIFNWPVVEGSYFTEADERNGAAVAVIGKKVRDKLLKDVSNPI-----------GQYILI 435

Query: 180 SQRLFNVIGTF-----AANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLDEPLKVD 233
               F V+G       ++  +     + +    AS RL                  +   
Sbjct: 436 ENVPFQVVGVLAGKGASSGDQDSDNRIAIPYSAASVRLFGTHNPEYVVIAAADARKVHET 495

Query: 234 SLSQQKL-------PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSL 286
            ++ ++L        +  +  +         +       M+G + ++ + V    ++  +
Sbjct: 496 EMAIEQLMLQLHNGKKDFELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIGVMNIM 555

Query: 287 GLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPI 346
            + V E+  E+ I    G   R I+  F+ +     ++G I G  L  L+          
Sbjct: 556 LMTVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGIAGIGLALLV---------- 605

Query: 347 IGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            G +L  + + VA   + +      A+   ++    P+ +AA   P  AL  E
Sbjct: 606 -GGVLILSEVAVAFSLVAIAGAFACALITGVVFGFMPARKAARLDPVTALTSE 657



>gi|60279990|gb|AAX16333.1|   PA2390 [Pseudomonas aeruginosa]
          Length = 663

 Score =  204 bits (519), Expect = 4e-51
 Identities = 64/416 (15%), Positives = 135/416 (32%), Gaps = 56/416 (13%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A+    R M          F + L+ +GI +GV ++V +L+V  G +R++   +      
Sbjct: 276 AVRAAWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSN 329

Query: 66  AILSSEHGS-------LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
            I  S +         +           L  V +V P+  G++V++         + G +
Sbjct: 330 IIYLSGYSPNPRAPMGIVSSDDVAAIATLPQVKKVMPVNGGELVVRYGNIDYHAYVGGNN 389

Query: 119 PAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPM 175
               + L   +         D +      ++G ++  +L              ++     
Sbjct: 390 TDFPEILNWPVAEGSYFTERDEDAATTVAVIGYKVRKKLF------------GSANPIGR 437

Query: 176 GRIPSQRLFNVIGTF-----AANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLDEP 229
             +     F VIG       ++  +     + +    AS RL            +   + 
Sbjct: 438 YILIENVPFQVIGVLAEKGSSSGDKDADNRIAIPYSAASIRLFGTRNPEY--VIIAAADA 495

Query: 230 LKVDSLSQQK---------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
            +V    +                +  +         +       M+G + ++ + V   
Sbjct: 496 QRVHQAERAIDQLMLRLHRGQRDYELTNNAAMIQAEAKTQNTLSLMLGSIAAISLLVGGI 555

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     I+  F+ + A   ++G + G AL        
Sbjct: 556 GVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVGGLAGIALAL------ 609

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                 IG +L    + VA     ++     A+   L+    P+ +AA   P  AL
Sbjct: 610 -----CIGGVLLLGQVAVAFSLSAIVGAFSCALVTGLVFGFMPARKAAQLDPVAAL 660



>gi|60279959|gb|AAX16304.1|   PA2390 [Pseudomonas aeruginosa]
 gi|32042528|ref|ZP_00140111.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 663

 Score =  204 bits (519), Expect = 5e-51
 Identities = 64/416 (15%), Positives = 135/416 (32%), Gaps = 56/416 (13%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A+    R M          F + L+ +GI +GV ++V +L+V  G +R++   +      
Sbjct: 276 AVRAAWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSN 329

Query: 66  AILSSEHGS-------LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
            I  S +         +           L  V +V P+  G++V++         + G +
Sbjct: 330 IIYLSGYSPNPRAPMGIVSSDDVAAIATLPQVKKVMPVNGGELVVRYGNIDYHAYVGGNN 389

Query: 119 PAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPM 175
               + L   +         D +      ++G ++  +L              ++     
Sbjct: 390 TDFPEILNWPVAEGSYFTERDEDAATTVAVIGYKVRKKLF------------GSANPIGR 437

Query: 176 GRIPSQRLFNVIGTF-----AANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLDEP 229
             +     F VIG       ++  +     + +    AS RL            +   + 
Sbjct: 438 YILIENVPFQVIGVLAEKGSSSGDKDADNRIAIPYSAASIRLFGTRNPEY--VIIAAADA 495

Query: 230 LKVDSLSQQK---------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
            +V    +                +  +         +       M+G + ++ + V   
Sbjct: 496 QRVHQAERAIDQLMLRLHRGQRDYELTNNAAMIQAEAKTQNTLSLMLGSIAAISLLVGGI 555

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     I+  F+ + A   ++G + G AL        
Sbjct: 556 GVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVGGLAGIALAL------ 609

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                 IG +L    + VA     ++     A+   L+    P+ +AA   P  AL
Sbjct: 610 -----CIGGVLLLGQVAVAFSLSAIVGAFSCALVTGLVFGFMPARKAAQLDPVAAL 660



>gi|9948431|gb|AAG05778.1|   probable ATP-binding/permease fusion ABC transporter [Pseudomonas
           aeruginosa PAO1]
 gi|11351064|pir||H83346   probable ATP-binding/permease fusion ABC transporter PA2390
           [imported] - Pseudomonas aeruginosa (strain PAO1)
 gi|15597586|ref|NP_251080.1|   probable ATP-binding/permease fusion ABC transporter [Pseudomonas
           aeruginosa PAO1]
          Length = 663

 Score =  204 bits (519), Expect = 5e-51
 Identities = 64/416 (15%), Positives = 135/416 (32%), Gaps = 56/416 (13%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A+    R M          F + L+ +GI +GV ++V +L+V  G +R++   +      
Sbjct: 276 AVRAAWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSN 329

Query: 66  AILSSEHGS-------LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
            I  S +         +           L  V +V P+  G++V++         + G +
Sbjct: 330 IIYLSGYSPNPRAPMGIVSSDDVAAIATLPQVKKVMPVNGGELVVRYGNIDYHAYVGGNN 389

Query: 119 PAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPM 175
               + L   +         D +      ++G ++  +L              ++     
Sbjct: 390 TDFPEILNWPVAEGSYFTERDEDAATTVAVIGYKVRKKLF------------GSANPIGR 437

Query: 176 GRIPSQRLFNVIGTF-----AANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLDEP 229
             +     F VIG       ++  +     + +    AS RL            +   + 
Sbjct: 438 YILIENVPFQVIGVLAEKGSSSGDKDADNRIAIPYSAASIRLFGTRNPEY--VIIAAADA 495

Query: 230 LKVDSLSQQK---------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
            +V    +                +  +         +       M+G + ++ + V   
Sbjct: 496 QRVHQAERAIDQLMLRLHRGQRDYELTNNAAMIQAEAKTQNTLSLMLGSIAAISLLVGGI 555

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     I+  F+ + A   ++G + G AL        
Sbjct: 556 GVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVGGLAGIALAL------ 609

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                 IG +L    + VA     ++     A+   L+    P+ +AA   P  AL
Sbjct: 610 -----CIGGVLLLGQVAVAFSLSAIVGAFSCALVTGLVFGFMPARKAAQLDPVAAL 660



>gi|12513909|gb|AAG55261.1|   putative ATP-binding component of a transport system [Escherichia
           coli O157:H7 EDL933]
 gi|25307485|pir||A85600   hypothetical protein ybjZ [imported] - Escherichia coli  (strain
           O157:H7, substrain EDL933)
 gi|15800637|ref|NP_286651.1|   putative ATP-binding component of a transport system [Escherichia
           coli O157:H7 EDL933]
          Length = 648

 Score =  203 bits (518), Expect = 5e-51
 Identities = 59/419 (14%), Positives = 127/419 (30%), Gaps = 52/419 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +  R +            + L+ +GI +G+ ++V+++ V +  ++ +  +I  +   
Sbjct: 257 ALTMAWRALAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310

Query: 66  AI-LSSEHGSLNPQ---------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I +       +                  K   V    P  + ++ L+           
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370

Query: 116 GIDPAQKDPLTPYLVNVKQTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+     +            + E        V+L      QL            P  +  
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQL-----------FPHKADV 419

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGY----EMLVNIEDASRLMRYPAGNITGWRLWLDE 228
                +       VIG       + G      + +     S  +      +    + + E
Sbjct: 420 VGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRV-MGQSWLNSITVRVKE 478

Query: 229 PLKVDSLSQQK--------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
                   QQ           +     +       + +  R  +  M L+  + + V   
Sbjct: 479 GFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFMTLVAVISLVVGGI 538

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     ++  F+++     ++G  LG  L  L+A  L
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTL 598

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +P            +   PL +++  L +    +L    P+  AA   P +AL  E
Sbjct: 599 QLFLPG---------WEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE 648



>gi|46140814|ref|ZP_00203756.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Dechloromonas aromatica RCB]
          Length = 402

 Score =  203 bits (518), Expect = 6e-51
 Identities = 74/429 (17%), Positives = 148/429 (34%), Gaps = 66/429 (15%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL + LR +R           S+L+ +GI +GV A++T++++ NG  + + + I  L   
Sbjct: 5   ALLLALREIRRN------LLRSFLTVLGIVIGVGAVITMVTLGNGATKMVSDQIASLGSN 58

Query: 66  AILSSEHGSLNP------------QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGV 113
            ++      L P              +     +++G+  VAP+    V L          
Sbjct: 59  LLMVMPGQRLGPGRDSAGAPKFKIADIEAIQQQVNGLKAVAPVVGSPVTLVVGTQNWSST 118

Query: 114 MLGIDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSAS 170
           + G            +   +Q    +   GK   ++G  +  +L                
Sbjct: 119 VSGTTNDYFISGNWKIAAGRQFTDDEERAGKAVCVVGNTVKKELF--------------G 164

Query: 171 QFTPMGRIPSQRLF--NVIGTFAANSEVD-----GYEMLVNIEDASRLMRYPAGNITGWR 223
              P+G     + F   VIG   A  +          +L+ +    R +   + +I    
Sbjct: 165 AGNPVGSSIRVKTFDCEVIGLLVAKGQGGMGQDQDDTVLMPLRTTQRRL-TGSLDIGNVM 223

Query: 224 LWLDEPLKVDSLSQQKLP-------------EGSKWQDWRDRKGELFQAVRMEKNMMGLL 270
           + L +         Q                +     D +     L   +     ++G +
Sbjct: 224 VSLKDGTDATVAIAQLRSLLRERRKLAENADDNFNVMDTKQIAETLSGTIGTMTALLGAV 283

Query: 271 LSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGA 330
            ++ + V    I+  + + V E+  E+ I    G    +++  F+++       G ++G 
Sbjct: 284 AAVSLLVGGIGIMNIMLVSVTERTREIGIRLAIGALENEVLWQFLIEAVVLSACGGLVGV 343

Query: 331 ALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAAT 390
            L  +    L++LM           +P    P   +     + AI ++    P+ RAA  
Sbjct: 344 GLAFVACLGLSSLMH----------IPFMFNPAINLTAFGFSAAIGVIFGYVPARRAAQL 393

Query: 391 QPAEALRYE 399
            P EALR+E
Sbjct: 394 DPIEALRHE 402



>gi|13360424|dbj|BAB34388.1|   putative ATP-binding component of a transport system [Escherichia
           coli O157:H7]
 gi|25307482|pir||E90749   hypothetical protein ECs0965 [imported] - Escherichia coli  (strain
           O157:H7, substrain RIMD 0509952)
 gi|15830219|ref|NP_308992.1|   putative ATP-binding component of a transport system [Escherichia
           coli O157:H7]
          Length = 648

 Score =  203 bits (517), Expect = 8e-51
 Identities = 59/419 (14%), Positives = 127/419 (30%), Gaps = 52/419 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +  R +            + L+ +GI +G+ ++V+++ V +  ++ +  +I  +   
Sbjct: 257 ALTMAWRALAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310

Query: 66  AI-LSSEHGSLNPQ---------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I +       +                  K   V    P  + ++ L+           
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370

Query: 116 GIDPAQKDPLTPYLVNVKQTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+     +            + E        V+L      QL            P  +  
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQL-----------FPHKADV 419

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGY----EMLVNIEDASRLMRYPAGNITGWRLWLDE 228
                +       VIG       + G      + +     S  +      +    + + E
Sbjct: 420 VGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRV-MGQSWLNSITVRVKE 478

Query: 229 PLKVDSLSQQK--------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
                   QQ           +     +       + +  R  +  M L+  + + V   
Sbjct: 479 GFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFMTLVAVISLVVGGI 538

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     ++  F+++     ++G  LG  L  L+A  L
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTL 598

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +P            +   PL +++  L +    +L    P+  AA   P +AL  E
Sbjct: 599 QLFLPG---------WEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE 648



>gi|45358197|ref|NP_987754.1|   hypothetical protein MMP0634 [Methanococcus maripaludis S2]
 gi|44920954|emb|CAF30190.1|   conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 397

 Score =  203 bits (516), Expect = 9e-51
 Identities = 64/409 (15%), Positives = 144/409 (35%), Gaps = 44/409 (10%)

Query: 15  RGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGS 74
                    +  S L+ IGI +G++A+V+++S+  G +  +   I       I       
Sbjct: 9   FAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPSQQ 68

Query: 75  LNP--------QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLT 126
           +           +  +    + GV+ V     G   +          +     +      
Sbjct: 69  ITSIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTYQIFF 128

Query: 127 P----YLVNVKQTDLEPGKYNVILGEQLASQLG---VNRGDQIRVMVPSASQFTPMGRIP 179
                Y +   +   +  KY  ++G  LA       ++ GD+I +               
Sbjct: 129 TEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEI--------------- 173

Query: 180 SQRLFNVIGTFAA-NSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQ 238
           + + + V+G      +  D   +++  E AS +          + + + +   V  +S+ 
Sbjct: 174 NDKKYKVVGILEQIGNPDDDNSIVIPYEAASEVFDVD-DEYNMFMVKIKDGEDVTKVSED 232

Query: 239 KLPE--------GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMV 290
              E                     +     +    +  +  + + V A  I  ++ + +
Sbjct: 233 IEDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSI 292

Query: 291 MEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVL 350
           +E++ ++ IL+  G     I+ +F+V+    G+ G I+G  LG L+A  +  +  I G  
Sbjct: 293 LERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYG 352

Query: 351 LDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           L    +   I    ++ + + +  + +LS  +P+   A   P + LR E
Sbjct: 353 L----IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397



>gi|16128847|ref|NP_415400.1|   macrolide transport protein (ABC superfamily, atp_bind
           (N-terminal), membrane (C-terminal)) [Escherichia coli
           K12]
 gi|1787105|gb|AAC73966.1|   macrolide-specific ABC-type efflux carrier; macrolide transport
           protein (ABC superfamily, atp_bind (N-terminal),
           membrane (C-terminal)) [Escherichia coli K12]
 gi|4062463|dbj|BAA35598.1|   ABC transporter probable ATP-binding subunit homolog [Escherichia
           coli K12]
 gi|7430353|pir||G64826   probable ABC transporter ybjZ - Escherichia coli (strain K-12)
 gi|15487341|dbj|BAB64542.1|   macrolide-specific ABC-type efflux carrier [Escherichia coli]
 gi|2829633|sp|P75831|MACB_ECOLI   Macrolide-specific ABC-type efflux carrier
          Length = 648

 Score =  202 bits (514), Expect = 2e-50
 Identities = 58/419 (13%), Positives = 127/419 (30%), Gaps = 52/419 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +  R +            + L+ +GI +G+ ++V+++ V +  ++ +  +I  +   
Sbjct: 257 ALTMAWRALAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310

Query: 66  AI-LSSEHGSLNPQ---------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I +       +                  K   V    P  + ++ L+           
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370

Query: 116 GIDPAQKDPLTPYLVNVKQTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+     +            + E        V+L      QL            P  +  
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQL-----------FPHKADV 419

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGY----EMLVNIEDASRLMRYPAGNITGWRLWLDE 228
                +       VIG       + G      + +     S  +      +    + + E
Sbjct: 420 VGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRV-MGQSWLNSITVRVKE 478

Query: 229 PLKVDSLSQQK--------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
                   QQ           +     +       + +  R  +  + L+  + + V   
Sbjct: 479 GFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGI 538

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     ++  F+++     ++G  LG  L  L+A  L
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTL 598

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +P            +   PL +++  L +    +L    P+  AA   P +AL  E
Sbjct: 599 QLFLPG---------WEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE 648



>gi|21227053|ref|NP_632975.1|   ABC transporter, permease protein [Methanosarcina mazei Go1]
 gi|20905377|gb|AAM30647.1|   ABC transporter, permease protein [Methanosarcina mazei Goe1]
          Length = 404

 Score =  202 bits (514), Expect = 2e-50
 Identities = 69/405 (17%), Positives = 144/405 (35%), Gaps = 42/405 (10%)

Query: 21  RFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAIL-SSEHGSLNPQQ 79
           R  +  S L+T+GI +GV A++   S+   F +   + +  +    I+  S+  +L    
Sbjct: 16  RSAKLRSALTTLGIVIGVAAVIINASLGASFNQFFTDEVSSVGSNFIIAYSDQPNLFYDS 75

Query: 80  LPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEP 139
             E      G+  V+P  T    +     V    ++G++   ++     +        + 
Sbjct: 76  ELEIIKNTPGILGVSPRKTVSGEINYLSDVKSVSIVGVNGDFQEIQGIKMEEGS-FLTDK 134

Query: 140 GKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAA------- 192
             Y+ +LG  LA +     G  I         F         + F V G           
Sbjct: 135 DIYSAVLGYDLAKE---EFGRSISHRSSVDIAFRQEDGTLVIKKFKVKGILEDSKETIVG 191

Query: 193 NSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLP----------- 241
                   + + I   + +      +   +    +    + S+S+               
Sbjct: 192 GDGSTDMIVYIPISTMNEMTG--EKDYGAFFAMAESSENIGSISKDVDKRLARSFGISER 249

Query: 242 -------EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQ 294
                  +     D  D   E     +     + +L  + + V +  I+  + + V E+ 
Sbjct: 250 DLNNEDAKPYTVFDQADVLEETGALGKALSTFLLVLALISLFVGSIGIMNIMLVTVTERT 309

Query: 295 GEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGA 354
            E+ I+++ G +   I+ +F+++      +G +LG A+G   A  L   +          
Sbjct: 310 REIGIMKSVGYSSSNILSLFLLESIMVSSLGGLLGTAIGGFGAYILEEAL---------- 359

Query: 355 ALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            LP       + +  L+++ + + + LYP+ +AA   P +ALRYE
Sbjct: 360 KLPPVFPFKLIEIGILISVLVGVGAGLYPARKAANMNPVDALRYE 404



>gi|28869362|ref|NP_791981.1|   macrolide ABC efflux protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28852603|gb|AAO55676.1|   macrolide ABC efflux protein [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 656

 Score =  202 bits (514), Expect = 2e-50
 Identities = 65/418 (15%), Positives = 135/418 (32%), Gaps = 53/418 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A+    R M          F + L+ +GI +GV ++V +L+V  G +R++   +      
Sbjct: 268 AIQAAWRVMWVNR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSN 321

Query: 66  AIL--------SSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGI 117
            I          +  G +  +++     +L  V  + P+  G   ++         + G 
Sbjct: 322 IIYLNGKAPNPRAPKGVITLEEVAA-LGELPEVKMIMPVNGGQAGVRFGNVDHSSYVGGN 380

Query: 118 DPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTP 174
           D          +         D +      ++G ++  +L    GD+I  +         
Sbjct: 381 DTHFPAIFNWPVAEGSYFSEADEQGAAAVAVIGYKVRQKLF---GDRIDPI--------G 429

Query: 175 MGRIPSQRLFNVIGTF-----AANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLDE 228
              +     F V+G        +        + +    AS RL                 
Sbjct: 430 QYILIENVPFQVVGVLQEKGATSGDLDSDNRIAIPYSSASIRLFGSQDPEYITIATRDAN 489

Query: 229 PLKVDSLSQQKL-------PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFN 281
            +K    + + L        +  +  +         +       M+G + ++ + V    
Sbjct: 490 NVKQAEAAIRTLLQRLHNGKQDYELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIG 549

Query: 282 IITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN 341
           ++  + + V E+  E+ I    G   R I+  F+ +     ++G + G            
Sbjct: 550 VMNIMLMTVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLAGIV---------- 599

Query: 342 NLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            L   +G  L  + + VA     VI     A+   ++    P+ +AA   P  AL  E
Sbjct: 600 -LALAMGAALLASKVAVAFTLSAVIGAFACALVTGVIFGFMPARKAARLDPVAALTSE 656



>gi|51597040|ref|YP_071231.1|   ABC transporter(efflux), fused permease and ATP-binding domains
           [Yersinia pseudotuberculosis IP 32953]
 gi|51590322|emb|CAH21959.1|   ABC transporter(efflux), fused permease and ATP-binding domains
           [Yersinia pseudotuberculosis IP 32953]
          Length = 678

 Score =  202 bits (514), Expect = 2e-50
 Identities = 53/400 (13%), Positives = 129/400 (32%), Gaps = 44/400 (11%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLM-PQAILSSEHGSLNPQQ--- 79
           R  + L+ +GI +G+ ++V+V+++  G ++++  NI  +      +       + +    
Sbjct: 299 RLRTALTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSAAI 358

Query: 80  ------LPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                   +   +   ++ V P  +  V L+       G + G+           +    
Sbjct: 359 HTLRDTDADVLAQQGYIHSVTPTVSTSVTLRYGNKSVSGTVNGVGEQYFLVRGYTIAQGM 418

Query: 134 QTDLEPGKY---NVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTF 190
                         ++ E    +L            P+         +       VIG  
Sbjct: 419 AFTRTSVNDLMQEAVIDENTRDKL-----------FPNGETPLGKVILLGSLPCRVIGVA 467

Query: 191 ----AANSEVDGYEMLVNIEDA-SRLMRYPAGNITGWRLWLD-EPLKVDS-----LSQQK 239
               +     +   + +    A  R++          R+  D +    +      LSQ+ 
Sbjct: 468 AKKQSGFGSDENLNVWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVIKLLSQRH 527

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
             +     +    +  +         ++ ++  + + V    ++  + + V E+  E+ +
Sbjct: 528 GTQDFFVMNTDSIRQTIQATTSTMTLLVSMIAVISLIVGGIGVMNIMLVSVTERTKEIGV 587

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
               G     IM  F+++     ++G  LG AL   +    +         L  +   + 
Sbjct: 588 RMAVGARASDIMQQFLIEAVLVCLLGGSLGVALSLGIGLLFS---------LFSSNFSMV 638

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                +I   + +  I ++   +P+ RAA   P  AL  E
Sbjct: 639 YSAASIITAFVCSSLIGVIFGFFPAKRAAEMDPIRALERE 678



>gi|15075093|emb|CAC46650.1|   PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN
           [Sinorhizobium meliloti]
 gi|15965824|ref|NP_386177.1|   PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN
           [Sinorhizobium meliloti 1021]
          Length = 647

 Score =  202 bits (514), Expect = 2e-50
 Identities = 69/419 (16%), Positives = 140/419 (33%), Gaps = 58/419 (13%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A+ + LR +R         F + L+ +GI +GV ++V +L++  G +  + + I  +   
Sbjct: 256 AVKMALRALRAN------LFRTILTLLGIVIGVGSVVAMLAIGTGAQNSVLDRISSMGSD 309

Query: 66  AILSSE-----------HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVM 114
            ++                        +   +L  V    P  T  V L+          
Sbjct: 310 LLVVRPSMANFRGSAGGTNVTLVPADADAITELANVAFAVPEMTSTVTLRRGNIDYQTTA 369

Query: 115 LGIDPAQKDPLTPYLVNV---KQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQ 171
            G  P   +  +  +       + D+E      +LGE +   L            P  S 
Sbjct: 370 NGTVPQFTEAKSWKIGRGEFINRNDMETYAPVAVLGETVVKTL-----------FPEGSD 418

Query: 172 FTPMGRIPSQRLFNVIGTFAA------NSEVDGYEMLVNIEDASRLMRYPAGNITGWRLW 225
                 + ++  F VIG  +        ++ D   ++     + RL      NI    + 
Sbjct: 419 PIGQYVLVNKIPFQVIGVMSGMGASAGGNDQDDVVLVPLTTGSMRLFGQR--NIRTITVK 476

Query: 226 LDEPLKVDSLSQQK--------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAV 277
           + +   +D   ++           + ++  +    +    +     K  +G + ++ + V
Sbjct: 477 VQDASAIDLTQERIQALLNERHRKDDTQITNMSSVREAFTETSNTMKFFLGSVAAISLLV 536

Query: 278 AAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLA 337
               ++  + + V E+  E+ +    G   R I++ F+V+      IG  +G   G    
Sbjct: 537 GGIGVMNIMLVSVSERTREIGVRMATGARERDILVQFIVEALVVSAIGGAIGVVAGLSTG 596

Query: 338 SQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                             +PV+  P  V +    A    LL    P+  A+  QPA AL
Sbjct: 597 YAAKAF-----------GMPVSFTPGPVALAFACAFLTGLLFGYLPARNASRLQPAVAL 644



>gi|30249074|ref|NP_841144.1|   probable ATP-binding/permease fusion ABC transporter [Nitrosomonas
           europaea ATCC 19718]
 gi|30138691|emb|CAD84992.1|   probable ATP-binding/permease fusion ABC transporter [Nitrosomonas
           europaea ATCC 19718]
          Length = 659

 Score =  202 bits (513), Expect = 2e-50
 Identities = 59/416 (14%), Positives = 130/416 (31%), Gaps = 51/416 (12%)

Query: 7   LFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQA 66
           +    R M            + L+ +GI +GV +++ +L++  G ++ + + +  +    
Sbjct: 272 IRAAWRVMWIHR------VRTSLTLLGIVIGVASVIVMLAIGEGTKQRVIDQMGSMGTTI 325

Query: 67  ILSSEHGSLNP-------QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDP 119
           +  S              ++  +   +L  ++RV P+    ++++         +     
Sbjct: 326 MYMSSDVPSTGGPVGVITEEDLDEVARLPEISRVMPVIGDPILVRHQNVDKQIYVFSSPY 385

Query: 120 AQKDPLTPYLVNVKQTDLEPGK---YNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
                    +   +       +     V+LG ++                P  S      
Sbjct: 386 IMPMVHHWRVAQGRFFTETEDRELAPVVVLGHKIYRSF-----------FPHLSNPVGQY 434

Query: 177 RIPSQRLFNVIGTF-----AANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK 231
            +     F VIG        + S+     + +        +           +      +
Sbjct: 435 LLIGTSPFEVIGVMAERGAESGSQNYDDMVFIPYRAGRARVYQAQEQPDYIVMEAASMDQ 494

Query: 232 VDS--------LSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNII 283
           V          L ++   E  +  +   R     +       M+GL+ ++ + V    ++
Sbjct: 495 VQEAEEAIRALLLERHGREDFRIGNAAARLKTQLETRDTMTRMLGLVAAVSLLVGGIGVM 554

Query: 284 TSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL 343
             + + V E+  E+ I    G     I+  F+++     I G  +G  LG          
Sbjct: 555 NVMLMTVRERTREIGIRMATGAREYDILSQFLIEAMLVTITGGTVGVILGL--------- 605

Query: 344 MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +G LL    +PV      +I     A+   L+    P+  AA   P  AL  E
Sbjct: 606 --TVGALLVFWEVPVVFSFGVMIGAFACAVITGLIFGYMPARTAARLDPVVALSSE 659



>gi|53712880|ref|YP_098872.1|   ABC transporter permease protein [Bacteroides fragilis YCH46]
 gi|52215745|dbj|BAD48338.1|   ABC transporter permease protein [Bacteroides fragilis YCH46]
          Length = 435

 Score =  201 bits (512), Expect = 3e-50
 Identities = 76/420 (18%), Positives = 166/420 (39%), Gaps = 33/420 (7%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSW-LSTIGITLGVMALVTVLSVMNGFERELQNNILGLM 63
           ++ F+  R  R     +     +  ++ IGI +G+  ++  +SV+ GF+ E++N ++G  
Sbjct: 24  LSYFLARRIYRDTDGGKQVSRPAVVIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVIGFG 83

Query: 64  PQAILSSEHGSLNPQ--------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
               +S+     + +         +      L  V  V   +T   ++++  +    V+ 
Sbjct: 84  SHIQISNFDAVGSYETHPVVVNDSMMVALSALPEVKHVQRYSTKPGMIKTDDAFQGMVLK 143

Query: 116 GIDPAQKDPLTPYLV---NVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+ P          +    +           V++ + +A +L +  GD+I          
Sbjct: 144 GVGPEFDPAFFRDHLIEGEIPAFSDTASTNQVVISKAIADRLKLKLGDKIYTYFIQKD-- 201

Query: 173 TPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK 231
                    R   V G +  N SE D   +L ++   +RL  +  G ++G  L + +  K
Sbjct: 202 ------VRARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDYDK 255

Query: 232 VDSL----------SQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFN 281
           ++ +           Q         Q       ++F  + +    + ++L L+V VA F 
Sbjct: 256 LEDITYRIATDTDNKQDIYGGTYYVQSIEQMNPQIFAWLDLLDLNVWVILILMVGVAGFT 315

Query: 282 IITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN 341
           +I+ L ++++E+   + IL+  G     I  VF+         G + G A+G +     +
Sbjct: 316 MISGLLIIILERTQMIGILKALGANDFTIRKVFLWFSVFLIGKGMLWGNAIGIVFCILQS 375

Query: 342 N--LMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              L  +       + +PV++     ++I    +  ++L  + PS+      PA+++RYE
Sbjct: 376 QFGLFKLDPETYYVSMVPVSMNIWLFLLINAGTLLTSVLMLVGPSYLITKINPADSMRYE 435



>gi|24112255|ref|NP_706765.1|   putative ATP-binding component of a transport system [Shigella
           flexneri 2a str. 301]
 gi|24051105|gb|AAN42472.1|   putative ATP-binding component of a transport system [Shigella
           flexneri 2a str. 301]
 gi|30062367|ref|NP_836538.1|   putative ATP-binding component of a transport system [Shigella
           flexneri 2a str. 2457T]
 gi|30040612|gb|AAP16344.1|   putative ATP-binding component of a transport system [Shigella
           flexneri 2a str. 2457T]
          Length = 648

 Score =  201 bits (512), Expect = 3e-50
 Identities = 59/419 (14%), Positives = 128/419 (30%), Gaps = 52/419 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +  R +            + L+ +GI +G+ ++V+++ V +  ++ +  +I  +   
Sbjct: 257 ALTMAWRALAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310

Query: 66  AI-LSSEHGSLNPQ---------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I +       +                  K   V    P  + ++ L+           
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370

Query: 116 GIDPAQKDPLTPYLVNVKQTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+     +            + E        V+L      QL            P  +  
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQL-----------FPHKADV 419

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGY----EMLVNIEDASRLMRYPAGNITGWRLWLDE 228
                +       VIG       + G      + +     S  +      +    + + E
Sbjct: 420 VGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRV-MGQSWLNSITVRVKE 478

Query: 229 PLKVDSLSQQK--------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
                   QQ           +     +       + +  R  +  + L+  + + V   
Sbjct: 479 GFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGI 538

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     ++  F+++     ++G  LG  L  L+A  L
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTL 598

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +P            +   PL +++  L + A  +L    P+  AA   P +AL  E
Sbjct: 599 QLFLPG---------WEIGFSPLALLLAFLCSTATGILFGWLPARNAARLDPVDALARE 648



>gi|48841130|ref|ZP_00298056.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Methanosarcina barkeri str. fusaro]
          Length = 408

 Score =  201 bits (512), Expect = 3e-50
 Identities = 62/402 (15%), Positives = 142/402 (35%), Gaps = 42/402 (10%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILS-SEHGSLNPQQLPE 82
           +  S L+T+GI +G+ A+V   S+   F +   + I  +    I++ SE  +L       
Sbjct: 23  KLRSALTTLGIVIGIAAVVVNASLGASFNQFFTDEISSVGSNFIIAASEQPNLFFDNEYN 82

Query: 83  TAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKY 142
                 G++ V+P  +    L          + G++   ++     +        +    
Sbjct: 83  LMKNTPGISGVSPRKSMSGDLTYLSETKNVNIAGVNKDFQEIQGLQMEEGT-FLTDKDSA 141

Query: 143 NVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFA-------ANSE 195
             +LG  +A++        I         F        ++ F V G          +   
Sbjct: 142 AAVLGYDIANEEFSR---NISHRSTVEIAFRQENGTVVKKSFKVKGILKNSKPTVVSEDS 198

Query: 196 VDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLP-------------- 241
                + + +   + ++     +   +    D P K+  +S                   
Sbjct: 199 DYDLTVFIPVSTMNEMIG--EKDYGAFLAMADSPEKIRDISDDVDSRLARNFGVPERDID 256

Query: 242 ----EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEV 297
               +     +  +   +  +      + + +L  + + V +  I+  + + V E+  E+
Sbjct: 257 DEDLKPYYVFNQEEVLEQTGKIGDALSSFLLVLALISLFVGSIGIMNIMLVTVTERTREI 316

Query: 298 AILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALP 357
            I+++ G +   I+ +F+++       G ++G  +G L A  L   +           LP
Sbjct: 317 GIMKSVGYSNSNILSLFLLESVMVSSFGGLVGTVIGGLGAYALEITL----------KLP 366

Query: 358 VAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                  + +   V++ + + + LYP+ +AA   P +ALRYE
Sbjct: 367 PVFPLALIEIGIAVSVLVGVTAGLYPARKAARMNPVDALRYE 408



>gi|45442402|ref|NP_993941.1|   putative ABC transporter, ATP-binding protein [Yersinia pestis
           biovar Medievalis str. 91001]
 gi|22125377|ref|NP_668800.1|   putative ATP-binding component of a transport system [Yersinia
           pestis KIM]
 gi|45437267|gb|AAS62818.1|   putative ABC transporter, ATP-binding protein [Yersinia pestis
           biovar Medievalis str. 91001]
 gi|21958261|gb|AAM85051.1|   putative ATP-binding component of a transport system [Yersinia
           pestis KIM]
 gi|16123181|ref|NP_406494.1|   putative ABC transporter, ATP-binding protein [Yersinia pestis
           CO92]
 gi|15980956|emb|CAC92244.1|   putative ABC transporter, ATP-binding protein [Yersinia pestis
           CO92]
 gi|25307488|pir||AI0364   probable ABC transporter, ATP-binding protein YPO3000 [imported] -
           Yersinia pestis (strain CO92)
          Length = 678

 Score =  201 bits (511), Expect = 3e-50
 Identities = 53/400 (13%), Positives = 130/400 (32%), Gaps = 44/400 (11%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLM-PQAILSSEHGSLNPQQ--- 79
           R  + L+ +GI +G+ ++V+V+++  G ++++  NI  +      +       + +    
Sbjct: 299 RLRTALTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSAAI 358

Query: 80  ------LPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                   +   +   ++ V P  +  V L+       G + G+           +    
Sbjct: 359 HTLRDTDADVLAQQGYIHSVTPTVSTSVTLRYGNKSVSGTVNGVGEQYFLVRGYTIAQGM 418

Query: 134 QTDLEPGKY---NVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTF 190
                       + ++ E    +L            P+         +       VIG  
Sbjct: 419 AFTRTSVNDLMQDAVIDENTRDKL-----------FPNGETPLGKVILLGSLPCRVIGVA 467

Query: 191 ----AANSEVDGYEMLVNIEDA-SRLMRYPAGNITGWRLWLD-EPLKVDS-----LSQQK 239
               +     +   + +    A  R++          R+  D +    +      LSQ+ 
Sbjct: 468 AKKQSGFGSDENLNVWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVIKLLSQRH 527

Query: 240 LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAI 299
             +     +    +  +         ++ ++  + + V    ++  + + V E+  E+ +
Sbjct: 528 GTQDFFVMNTDSIRQTIQATTSTMTLLVSMIAVISLIVGGIGVMNIMLVSVTERTKEIGV 587

Query: 300 LQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVA 359
               G     IM  F+++     ++G  LG AL   +    +         L  +   + 
Sbjct: 588 RMAVGARASDIMQQFLIEAVLVCLLGGSLGVALSLGIGLLFS---------LFSSNFSMV 638

Query: 360 IEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                +I   + +  I ++   +P+ RAA   P  AL  E
Sbjct: 639 YSAASIITAFVCSSLIGVIFGFFPAKRAAEMDPIRALERE 678



>gi|48867198|ref|ZP_00320783.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Haemophilus influenzae
           86-028NP]
          Length = 312

 Score =  201 bits (511), Expect = 4e-50
 Identities = 78/310 (25%), Positives = 156/310 (50%), Gaps = 16/310 (5%)

Query: 102 VLQSARSVAVGVMLGIDPAQKDPLTP--YLVNVKQTDLEPGKYNVILGEQLASQLGVNRG 159
           ++++   + V  + G++   +D ++     V  +  +    +  ++LG  +A +L V  G
Sbjct: 1   MVENGSKLKVVQVKGVEKQAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKELDVKVG 60

Query: 160 DQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNI 219
           D I +++   +      + P++    V      + ++D    L+ +  A   + Y    I
Sbjct: 61  DWITLLISQQNGDEQFAQ-PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQI 119

Query: 220 TGWRLWLDEPLKVDSLSQQKL---PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA 276
           TG  L LD+P    +L    L   P+    Q+W  + G +++ +++ + +M + + L++ 
Sbjct: 120 TGVELKLDDPFSARNLDLSMLNDYPQMLYMQNWISKFGYMYRDIQLIRTVMYIAMVLVIG 179

Query: 277 VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALL 336
           VA FNI+++L + V +KQG++AI++T G     I  +F+  G  AG+ G ++G  LG +L
Sbjct: 180 VACFNIVSTLIMAVKDKQGDIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGIVLGIIL 239

Query: 337 ASQLNNLMPII----------GVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWR 386
           A  L   +  I          G +     LP  +  L V+++ + A+A++L+++LYP+ R
Sbjct: 240 ALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWLDVLMVLVAALALSLMASLYPASR 299

Query: 387 AAATQPAEAL 396
           AA  QPA+ L
Sbjct: 300 AAKLQPAQVL 309



>gi|53715757|ref|YP_101749.1|   hypothetical protein BF4478 [Bacteroides fragilis YCH46]
 gi|52218622|dbj|BAD51215.1|   conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 412

 Score =  201 bits (511), Expect = 4e-50
 Identities = 86/406 (21%), Positives = 174/406 (42%), Gaps = 22/406 (5%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
           +  +I  RY+  +        +S +S  G+ L  MA+V  LSV NGF+  + +      P
Sbjct: 3   LPFYIARRYLFSKKKHNAINIISAISVCGVALATMAMVCTLSVFNGFQDTVADLFTVFDP 62

Query: 65  QAILSSEHGSLNPQQLP--ETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQK 122
           +  ++   G +   Q P  +   ++  V+ +      + ++Q      + V+ G+    +
Sbjct: 63  ELKVTIAEGKVFDAQDPRIQAIRQMPEVDVLTETLEENAMVQYKDRQTMAVIKGVQNNFE 122

Query: 123 DPLTPYLVNVKQTDLEPGKYNV---ILGEQLASQLG--VNRGDQIRVMVPS----ASQFT 173
                  +     +       V   ++G +L S LG  +   D +++ +P      +   
Sbjct: 123 QLTAIDSILYGAGEFLLNDSIVDYGVMGIELVSTLGTGIRFVDPLQIYIPKRSGKVNMAN 182

Query: 174 PMGRIPSQRLFNVIGTFAANSE-VDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK- 231
           P        L++    F  N +  DG  +L +++ A RL+ Y    ++   L L      
Sbjct: 183 PAASFNMDYLYSPGVVFVVNQQKYDGQYILTSLDFARRLLDYTT-EVSAIELKLKPGSDL 241

Query: 232 --VDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLM 289
             V +  +++L +    ++  +++ ++F+ + +EK +  L L+ I+ +A FN+I SL ++
Sbjct: 242 SFVKAKIKKELGDDFVIRNRYEQQEDVFRIMEIEKLVSYLFLTFILVIACFNVIGSLSML 301

Query: 290 VMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLAS------QLNNL 343
           +++K+ +V  L+  G   R +  +F+ +G      GAI+G  LG LL         ++  
Sbjct: 302 ILDKKEDVDTLRKLGANDRLVSRIFLFEGCMISFYGAIIGIVLGLLLCWVQMTYGVISLG 361

Query: 344 MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAA 389
                      A PV++    VIVI +   A+  LS  YP    + 
Sbjct: 362 GGSAAGNFVVDAYPVSVHLWDVIVIFITVFAVGFLSVWYPVRYLSK 407



>gi|16799311|ref|NP_469579.1|   hypothetical protein lin0234 [Listeria innocua Clip11262]
 gi|16412653|emb|CAC95467.1|   lin0234 [Listeria innocua]
 gi|25514520|pir||AC1462   membrane protein (probable ABC transporter component) homolog
           lin0234 [imported] - Listeria innocua (strain Clip11262)
          Length = 402

 Score =  200 bits (510), Expect = 5e-50
 Identities = 68/433 (15%), Positives = 162/433 (37%), Gaps = 65/433 (15%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M    ++ +  + ++        +  S+L+ +GI +GV +++ ++S+ NG  +E+ + + 
Sbjct: 1   MNVLQSMKMAWKQLKA------SKLRSFLTMLGIIIGVASVILLVSLGNGVTKEVDDQMG 54

Query: 61  GLMPQ-AILSSEHGSLNPQQLPETAVK---LDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
            L      + +   + N +   +  +K   +DGV  V+P  +G V        +   ++G
Sbjct: 55  DLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATYDYKSSSNKVIG 114

Query: 117 IDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGV---NRGDQIRVMVPSAS 170
            +   K   +  +   +     D E G+   ++G  +AS L       G+ IR+      
Sbjct: 115 TNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGNPIGETIRL------ 168

Query: 171 QFTPMGRIPSQRLFNVIGTFAANSEVD----GYEMLVNIEDASRLMRYPAGNITGWRLWL 226
                    +   + V+G               ++ + I  A RL++             
Sbjct: 169 ---------NGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKS 219

Query: 227 --------------------DEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNM 266
                               +E  + ++ S  ++    +  + ++               
Sbjct: 220 AEDVDFVVNTLESRLAIKFGNEKEQEENASSAQMGPSYQVINQQEILNAFNTISTTLTTA 279

Query: 267 MGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGA 326
           +G + ++ + V    I+  + + V E+  E+ I +  G   R I++ F+++     + G 
Sbjct: 280 LGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGG 339

Query: 327 ILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWR 386
           I+G  +G   A    ++  I             I    +I   + ++ I ++  + P+ +
Sbjct: 340 IIGILIGVSGALIFGSVAGISSG----------ITAGTIIFSFVFSLCIGVIFGIAPANK 389

Query: 387 AAATQPAEALRYE 399
           A+  +P +ALR E
Sbjct: 390 ASKLRPIDALRSE 402



>gi|45441056|ref|NP_992595.1|   putative ABC transporter ATP-binding protein [Yersinia pestis
           biovar Medievalis str. 91001]
 gi|45435915|gb|AAS61472.1|   putative ABC transporter ATP-binding protein [Yersinia pestis
           biovar Medievalis str. 91001]
          Length = 649

 Score =  200 bits (510), Expect = 5e-50
 Identities = 63/418 (15%), Positives = 136/418 (32%), Gaps = 50/418 (11%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +  R M            + L+ +GI +G+ ++V++L V +  ++ +  +I  +   
Sbjct: 258 ALLMAWRAMSANK------MRTALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311

Query: 66  AI-LSSEHGSLNPQ---------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I +       +                      V+ V+P   G + L+         +L
Sbjct: 312 TIDIYPGKDFGDDDPSTRQALVHDDMAALKAQSYVSAVSPSIGGSMRLRFGNIDVAASVL 371

Query: 116 GIDPAQKDPLTPYLVNV---KQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+           +       +  +E     V++      +L  +  D +          
Sbjct: 372 GVSDEYFRVFGMAMEQGAPITREQVERQAPTVVIDLNTQRRLFPHMKDVV---------- 421

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGYE----MLVNIED-ASRLMRYPAGNITGWRLWL- 226
                +       V+G  A    + G      + V     A+RLM     +    R+   
Sbjct: 422 -GQVILVGNMPATVVGVVAEKKSMFGSNKALRVWVPYSTMANRLMGRSYFDSITIRIKEG 480

Query: 227 -----DEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFN 281
                 E   V  L+ +   +     +         +  +  +  + L+  + + V    
Sbjct: 481 YSSKEAEQQLVRLLTLRHGKKDIFTYNMDSLLQTAEKTTQTMQLFLTLVAVISLVVGGIG 540

Query: 282 IITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN 341
           ++  + + V E+  E+ I    G     +M  F+++     +IG  LG +L   +   + 
Sbjct: 541 VMNIMLVSVTERTREIGIRMAVGARSSDVMQQFLIEAVLVCLIGGALGISLSFAIGLIVE 600

Query: 342 NLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +P            +A  P+ +    L +  I ++    P+  AA   P +AL  E
Sbjct: 601 MFLPN---------WRIAFPPMALFSAFLCSTVIGVVFGYLPARSAARLNPIDALARE 649



>gi|29338522|gb|AAO76322.1|   ABC transporter, permease protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29346625|ref|NP_810128.1|   ABC transporter, permease protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 406

 Score =  200 bits (510), Expect = 5e-50
 Identities = 62/433 (14%), Positives = 144/433 (33%), Gaps = 61/433 (14%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M       I LR +            ++L+ +GI +GV +++T+L++  G +R +Q  I 
Sbjct: 1   MNGTNLFKIALRALANNK------LRAFLTMLGIIIGVASVITMLAIGQGSKRSIQQQIS 54

Query: 61  GLMPQAILSSEHG--------------SLNPQQLPETAVKLDGVNRVAPITTGDVVLQSA 106
            +    I+                   +L          + + ++ ++P  +    L + 
Sbjct: 55  EMGSNMIMIHPGADRRGGVRQDPSAMQTLKLTDYEALRDETNFLSAISPNVSSSGQLIAG 114

Query: 107 RSVAVGVMLGIDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIR 163
            +     + G+     D     + +       D++      ++G+ +   L         
Sbjct: 115 NNNYPSSVSGVGLEYLDIRQLSVESGDMFTEADIQSSAKVCVIGKTIVDNL--------- 165

Query: 164 VMVPSASQFTPMGRIPSQRLFNVIGTFAANS-----EVDGYEMLVNIEDASRLM------ 212
              P  S         ++  F V+G   A       +     +L       + +      
Sbjct: 166 --FPDGSDPIGKIIRFNKIPFRVVGVLKAKGYNSMGQDQDNIVLAPYTTVMKRLLAVTYL 223

Query: 213 ------RYPAGNITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNM 266
                              + E L+ +   +    +    +  ++    L     +   +
Sbjct: 224 QGVFASALSEDMTEYATDEITEILRRNHKLKASDEDDFTIRTQQELSTMLNSTTDLMTTL 283

Query: 267 MGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGA 326
           +  +  + + V    I+  + + V E+  E+ +  + G     I+  F+++     I G 
Sbjct: 284 LACIAGISLVVGGIGIMNIMYVSVTERTREIGLRMSVGARGVDILSQFLIEAIMISITGG 343

Query: 327 ILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWR 386
           ++G  +G   +  + ++          A  P+ I+P  V +   V     +    YP+ +
Sbjct: 344 LIGVIIGCGASWIVKSV----------AHWPIFIQPWSVFLSFAVCTVTGVFFGWYPAKK 393

Query: 387 AAATQPAEALRYE 399
           AA   P EA+RYE
Sbjct: 394 AADLDPIEAIRYE 406



>gi|53730882|ref|ZP_00348995.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Dechloromonas aromatica RCB]
          Length = 399

 Score =  200 bits (510), Expect = 5e-50
 Identities = 84/426 (19%), Positives = 153/426 (35%), Gaps = 54/426 (12%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFER------- 53
           M    A  + LR +  +         S+L+ +GI +G+ A++ + S+  G  R       
Sbjct: 1   MLWSDAFQLALRAITAQR------LRSFLTLLGIAVGIAAVILLTSIGEGIHRFVLGEFT 54

Query: 54  ELQNNILGLMPQAILSSEHGSLNPQ-------QLPETAVKLDGVNRVAPITTGDVVLQSA 106
           +   N++ + P    +    S  P           ++  +L  V  V P   G+  ++  
Sbjct: 55  QFGTNVITVAPGKTKTGGSPSGLPSSARPLSLDDAKSIERLPHVVAVTPNVRGNAEVEGN 114

Query: 107 RSVAVGVMLGIDPAQKDPLTPYLVNVKQ---TDLEPGKYNVILGEQLASQLGVNRGDQIR 163
                 ++ G++          + + +     D    +  V+LG +L ++L         
Sbjct: 115 GRTRRTLIYGVNSKLPLIFRSTVQSGQFLPADDEGSARPFVVLGSKLKNEL--------- 165

Query: 164 VMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVD----GYEMLVNIEDASRLMRYPAGNI 219
               S +      RI     F VIG  A   +           V    A  L      + 
Sbjct: 166 --FGSENPLGQRLRISGLH-FRVIGVLAPKGQFLGIDLDDTAFVPTARAQELFNREGVDE 222

Query: 220 TGWRLWLDEPLKVDS------LSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSL 273
                    P  + +      L  +   E        +    L   + +    +G L  +
Sbjct: 223 INIAAEEGIPSAIVANRVKTHLIDRHNREDFTIVTQEEMLKTLSNILNVLTMAVGALGGI 282

Query: 274 IVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALG 333
            + V    I+T + + V E+ GE+ +L   G   R I+ +F+ +  +   +G I G ALG
Sbjct: 283 SLLVGGVGIVTIMTIAVTERTGEIGLLVALGAPRRTILALFLGEAVALSALGGIFGLALG 342

Query: 334 ALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPA 393
             LA  ++  +P         ALPV      V++   +A+ I L + + P+  AA   P 
Sbjct: 343 FGLAQLIHFALP---------ALPVHTPLSFVLLAEGIAITIGLAAGVLPARNAARLNPV 393

Query: 394 EALRYE 399
           EALR E
Sbjct: 394 EALRTE 399



>gi|51595731|ref|YP_069922.1|   putative ABC transporter with fused permease and ATP-binding
           domains [Yersinia pseudotuberculosis IP 32953]
 gi|22126690|ref|NP_670113.1|   putative ATP-binding component of ABC transport system [Yersinia
           pestis KIM]
 gi|21959707|gb|AAM86364.1|   putative ATP-binding component of ABC transport system [Yersinia
           pestis KIM]
 gi|16121645|ref|NP_404958.1|   putative ABC transporter ATP-binding protein [Yersinia pestis CO92]
 gi|15979414|emb|CAC90194.1|   putative ABC transporter ATP-binding protein [Yersinia pestis CO92]
 gi|51589013|emb|CAH20631.1|   putative ABC transporter with fused permease and ATP-binding
           domains [Yersinia pseudotuberculosis IP 32953]
 gi|25307487|pir||AG0166   probable ABC transporter ATP-binding protein YPO1365 [imported] -
           Yersinia pestis (strain CO92)
          Length = 649

 Score =  200 bits (509), Expect = 6e-50
 Identities = 63/418 (15%), Positives = 136/418 (32%), Gaps = 50/418 (11%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +  R M            + L+ +GI +G+ ++V++L V +  ++ +  +I  +   
Sbjct: 258 ALLMAWRAMSANK------MRTALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311

Query: 66  AI-LSSEHGSLNPQ---------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I +       +                      V+ V+P   G + L+         +L
Sbjct: 312 TIDIYPGKDFGDDDPSTRQALVHDDMAALKAQSYVSAVSPSIGGSMRLRFGNIDVAASVL 371

Query: 116 GIDPAQKDPLTPYLVNV---KQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+           +       +  +E     V++      +L  +  D +          
Sbjct: 372 GVSDEYFRVFGMAMEQGAPITREQVERQAQTVVIDLNTQRRLFPHMKDVV---------- 421

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGYE----MLVNIED-ASRLMRYPAGNITGWRLWL- 226
                +       V+G  A    + G      + V     A+RLM     +    R+   
Sbjct: 422 -GQVILVGNMPATVVGVVAEKKSMFGSNKALRVWVPYSTMANRLMGRSYFDSITIRIKEG 480

Query: 227 -----DEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFN 281
                 E   V  L+ +   +     +         +  +  +  + L+  + + V    
Sbjct: 481 YSSKEAEQQLVRLLTLRHGKKDIFTYNMDSLLQTAEKTTQTMQLFLTLVAVISLVVGGIG 540

Query: 282 IITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN 341
           ++  + + V E+  E+ I    G     +M  F+++     +IG  LG +L   +   + 
Sbjct: 541 VMNIMLVSVTERTREIGIRMAVGARSSDVMQQFLIEAVLVCLIGGALGISLSFAIGLIVE 600

Query: 342 NLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +P            +A  P+ +    L +  I ++    P+  AA   P +AL  E
Sbjct: 601 MFLPN---------WRIAFPPMALFSAFLCSTVIGVVFGYLPARSAARLNPIDALARE 649



>gi|42522999|ref|NP_968379.1|   Lipoprotein releasing system transmembrane protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39575204|emb|CAE79372.1|   Lipoprotein releasing system transmembrane protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 405

 Score =  200 bits (508), Expect = 7e-50
 Identities = 94/405 (23%), Positives = 181/405 (44%), Gaps = 17/405 (4%)

Query: 9   IGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAIL 68
           +  R +  R     G   + L+ +G+ LGV ALV  ++VM+GFE  L+  +  +   A +
Sbjct: 4   LSWRLLFSRKTMFGGS--APLALLGLVLGVAALVASMAVMSGFENTLKTAMAEVSGHAQV 61

Query: 69  SSEHG-SLNPQQLPETAVKL-DGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLT 126
                   + ++L E   K    +   +     + VL +   ++  ++ G+D  + + + 
Sbjct: 62  VKRSRFPDDWKELEERIRKAEPTLVNTSRFVFIEAVLANKGQISGVLIQGVDTQRVNEVL 121

Query: 127 PYLVNVKQT----DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQR 182
            +   V       ++       ++G+ LA ++ +N GD  RV+VP A    P        
Sbjct: 122 NFKRRVLSGTDDLNVASDVPLALVGKNLAKKMNLNVGDTFRVVVPVADSVDPSKFQRRVG 181

Query: 183 LFNVIGTFAANS-EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS---QQ 238
            F V G       + +   +L +++    L        +G  L   +       +     
Sbjct: 182 AFKVQGILDLGKHDWNERFILSDLKATQDLADI-GDRYSGLLLKFQDVDHARDAAFNLSA 240

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
            L      +DWRD    LF+A+ +E+  +  ++ +I  VAAFN+  +L + V+ +  ++A
Sbjct: 241 VLGSPYWVRDWRDANENLFEAINVERPGIFFVVLVITIVAAFNVSATLFVNVVRRFKDIA 300

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAA--- 355
           IL+T GL+ + IM +F+ QG   G++G +LG ALG  +A     +   + ++        
Sbjct: 301 ILKTVGLSQKDIMKIFVCQGLFMGLVGIVLGFALGVGIAYLFEFMQGRLSLISGEVYRLE 360

Query: 356 -LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            + + I  +  + I +  + I L++T+ P+ R A  +P E LR E
Sbjct: 361 NIELQIRFVDGVAICVATLVICLIATIAPARRGAKLEPVEGLRSE 405



>gi|46143385|ref|ZP_00135343.2|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
          Length = 640

 Score =  199 bits (507), Expect = 9e-50
 Identities = 47/416 (11%), Positives = 138/416 (33%), Gaps = 49/416 (11%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           +  + +  +            + L+ +GI +G+ ++++V+++  G ++++ +NI  L   
Sbjct: 252 SFKMAINAITAHK------LRALLTMLGIVIGITSVISVVALGQGSQQQILSNINSLGTN 305

Query: 66  AILSSEHGSLNPQ----------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            +          +                 K   V+   P +  +  +    +     + 
Sbjct: 306 TMTIMNGTGFGDRRANLTKNLTISDAMMLNKQQFVDSTTPSSNLNGTVIYGNTNVTASIN 365

Query: 116 GIDPAQKDPLTPYLVNVKQTDLEP---GKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+     +     +++ +  D +        V++       LG+                
Sbjct: 366 GVGEQFVNVKGLKMISGRFFDADEVKLSSQVVVIDGNTKKDLGLT------------DPV 413

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGN-ITGWRLWLDEPLK 231
                +  ++   VIG    ++ ++   + + +   + + R      I    + + + ++
Sbjct: 414 EGKVILVDKKPLTVIGMAQESNNLNQTSLKMWMPYTTLMQRISGEKFIDSLTVKVKDNVE 473

Query: 232 VDS--------LSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNII 283
             +        L+ +   +     +    K  +       K ++  +  + + V    ++
Sbjct: 474 SQTAEKSINELLTAKHGKKDFFVMNSDTIKQTITSTTNTMKLLISSIAMISLIVGGIGVM 533

Query: 284 TSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL 343
             + + V E+  E+ +    G     I+  F+++     ++G I+G      +    N L
Sbjct: 534 NIMLVSVTERTKEIGVRMAIGAKQNNILQQFLIEAILICLLGGIIGILFAMAIIFSFNTL 593

Query: 344 MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                    G    + + P  V++    +  I ++    P+  A+   P  AL  E
Sbjct: 594 ---------GTNFKMILSPASVVLAVFCSTLIGVVFGYMPAKNASKLNPITALAQE 640



>gi|60495122|emb|CAH09943.1|   putative lipoprotein releasing system transmembrane protein
           [Bacteroides fragilis NCTC 9343]
 gi|60683688|ref|YP_213832.1|   putative lipoprotein releasing system transmembrane protein
           [Bacteroides fragilis NCTC 9343]
          Length = 412

 Score =  199 bits (507), Expect = 9e-50
 Identities = 86/406 (21%), Positives = 174/406 (42%), Gaps = 22/406 (5%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
           +  +I  RY+  +        +S +S  G+ L  MA+V  LSV NGF+  + +      P
Sbjct: 3   LPFYIARRYLFSKKKHNAINIISAISVCGVALATMAMVCTLSVFNGFQDTVADLFTVFDP 62

Query: 65  QAILSSEHGSLNPQQLP--ETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQK 122
           +  ++   G +   Q P  +   ++  V+ +      + ++Q      + V+ G+    +
Sbjct: 63  ELKVTIAEGKVFDAQAPRIQAIRQMPEVDVLTETLEENAMVQYKDRQTMAVIKGVQNNFE 122

Query: 123 DPLTPYLVNVKQTDLEPGKYNV---ILGEQLASQLG--VNRGDQIRVMVPS----ASQFT 173
                  +     +       V   ++G +L S LG  +   D +++ +P      +   
Sbjct: 123 QLTAIDSILYGAGEFLLNDSIVDYGVMGIELVSTLGTGIRFVDPLQIYIPKRSGKVNMAN 182

Query: 174 PMGRIPSQRLFNVIGTFAANSE-VDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK- 231
           P        L++    F  N +  DG  +L +++ A RL+ Y    ++   L L      
Sbjct: 183 PAASFNMDYLYSPGVVFVVNQQKYDGQYILTSLDFARRLLDYTT-EVSAIELKLKPGSDL 241

Query: 232 --VDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLM 289
             V +  +++L +    ++  +++ ++F+ + +EK +  L L+ I+ +A FN+I SL ++
Sbjct: 242 SFVKAKIKKELGDDFVIRNRYEQQEDVFRIMEIEKLVSYLFLTFILVIACFNVIGSLSML 301

Query: 290 VMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLAS------QLNNL 343
           +++K+ +V  L+  G   R +  +F+ +G      GAI+G  LG LL         ++  
Sbjct: 302 ILDKKEDVDTLRKLGANDRLVSRIFLFEGCMISFYGAIIGIVLGLLLCWVQMTYGIISLG 361

Query: 344 MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAA 389
                      A PV++    VIVI +   A+  LS  YP    + 
Sbjct: 362 GGSAAGNFVVDAYPVSVHLWDVIVIFITVFAVGFLSVWYPVRYLSK 407



>gi|37525538|ref|NP_928882.1|   Macrolide-specific ABC-type efflux carrier protein MacB
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36784966|emb|CAE13884.1|   Macrolide-specific ABC-type efflux carrier protein MacB
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 647

 Score =  199 bits (507), Expect = 1e-49
 Identities = 58/418 (13%), Positives = 126/418 (30%), Gaps = 50/418 (11%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           ALF+  R M         +  + L+ +GI +G+ ++VT+L + +     + ++I  +   
Sbjct: 256 ALFMAWRAM------VVNKMRTLLTMLGIIIGIASVVTILVIGDAARASVLSDIKEIATN 309

Query: 66  AILSSEHGSLNPQQ----------LPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I                        +       +  V+P   G + L+         + 
Sbjct: 310 TIDIYPGEDFGIDDPVSKQALKIADADAIKVQPYILAVSPEIEGQMRLRKGNIDVSSKVT 369

Query: 116 GIDPAQKDPLTPYLVNVKQTDL---EPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+                   L         V++ +    +L            P     
Sbjct: 370 GVGDEYFQVYALRFAQGIGFSLDMIRRQGQVVVIDKNTQRKL-----------FPHQKNV 418

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGYE----MLVNIEDA-SRLMRYPAGNITGWRLWLD 227
                +       ++G  A      G      + +      SRLM     +    R+  D
Sbjct: 419 IGEVILVGNMPATIVGVIANRESAFGNSKLLHIWLPYSTMTSRLMNRSYLDSITVRVKDD 478

Query: 228 -EPLKVDSLSQQKL-----PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFN 281
                 + +  Q L      +     +         +     +  + ++  + + V    
Sbjct: 479 YNSKDAEKMIVQLLTLRHGKKDIFTDNVDMLVKAAEKTAHTLQLFLTMVAVISLIVGGIG 538

Query: 282 IITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN 341
           ++  + + V E+  E+ I    G     +   F+++     ++G +LG  L   +A    
Sbjct: 539 VMNIMLVSVTERTREIGIRMAVGARTSDVRQQFLIEAILVCLVGGVLGIGLSYTIAFIAQ 598

Query: 342 NLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
             +P               +P+ ++     + AI ++    P+  AA   P EAL  E
Sbjct: 599 LALPG---------WHFVFQPIALLSAFACSTAIGVIFGFLPARNAARLDPIEALARE 647



>gi|16802241|ref|NP_463726.1|   hypothetical protein lmo0195 [Listeria monocytogenes EGD-e]
 gi|16409552|emb|CAC98410.1|   lmo0195 [Listeria monocytogenes]
 gi|25514801|pir||AD1099   membrane protein (probable ABC transporter component) homolog
           lmo0195 [imported] - Listeria monocytogenes (strain
           EGD-e)
          Length = 402

 Score =  199 bits (507), Expect = 1e-49
 Identities = 68/430 (15%), Positives = 159/430 (36%), Gaps = 59/430 (13%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M    ++ +  + ++        +  S+L+ +GI +GV +++ ++S+ NG  +E+ + + 
Sbjct: 1   MNVLQSMKMAWKQLKA------SKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMG 54

Query: 61  GLMPQ-AILSSEHGSLNPQQLPETAVK---LDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
            L      + +   + N +   +  +K   +DGV  V+P  +G V        +   ++G
Sbjct: 55  DLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIG 114

Query: 117 IDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
            +   K   +  +   +     D E G+   ++G  +AS L    GD I           
Sbjct: 115 TNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFG-FGDPI----------- 162

Query: 174 PMGRIPSQRLFNVIGTFAANSEVD----GYEMLVNIEDASRLMRYPAGNITGWRLWL--- 226
                 +   + V+G               ++ + I  A RL++                
Sbjct: 163 GETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAED 222

Query: 227 -----------------DEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGL 269
                            DE  +  + S  ++    +  + ++               +G 
Sbjct: 223 VDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGA 282

Query: 270 LLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILG 329
           + ++ + V    I+  + + V E+  E+ I +  G   R I++ F+++     + G ++G
Sbjct: 283 IAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIG 342

Query: 330 AALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAA 389
             +G   A    ++  I             I    +I   + ++ I ++  + P+ +A+ 
Sbjct: 343 IIIGVSGALIFGSVAGISSG----------ITAGTIIFSFVFSLCIGVIFGIAPANKASK 392

Query: 390 TQPAEALRYE 399
            +P +ALR E
Sbjct: 393 LRPIDALRSE 402



>gi|28899872|ref|NP_799527.1|   hypothetical protein VPA0017 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28808155|dbj|BAC61360.1|   conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 422

 Score =  199 bits (506), Expect = 1e-49
 Identities = 77/430 (17%), Positives = 166/430 (38%), Gaps = 49/430 (11%)

Query: 4   PVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLM 63
           PV++ +    ++           S LS + I + V AL +           L+ +     
Sbjct: 6   PVSVRLAWLNLQRNRR------RSLLSMLIIAIAVFALTSAGGFGLYTYDSLKESTARDT 59

Query: 64  PQAILSSE------------HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAV 111
               L++             +G  +  ++ +  + L  V  V P      ++ +    ++
Sbjct: 60  GHLTLTTPGYFAKEEEMPLSNGLSHADEITKQLIGLSEVRGVQPRVEFSGLISNGSKSSI 119

Query: 112 GVMLGIDPAQKDPLTPYLV--------NVKQTDLEPGKYNVILGEQLASQLGVNRGDQIR 163
            + +G++  + D   P+L         N+  +  +  +  V+LG  LAS L VN GD I 
Sbjct: 120 FIGIGVNEREFDMKGPFLDVRDGQTLSNIHASRYDASEPEVMLGVDLASNLSVNVGDWIT 179

Query: 164 VMVPSASQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGW 222
           ++  +           +   F V G ++    E+D  ++ V+I  A  L+   +  ++  
Sbjct: 180 LLATTTDGA------LNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG--SDKVSAL 231

Query: 223 RLWLDEPLKVDSLSQQKLP-----------EGSKWQDWRDRKGELFQAVRMEKNMMGLLL 271
            ++L +    + + QQ              +  +   W++R     +   +   + G++ 
Sbjct: 232 SVFLFDTCLTNKVEQQVATILNKQKPSFGDQEVEITPWQERAFFYLKVKDLYDRIFGIMG 291

Query: 272 SLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAA 331
           +++  V    +  ++ + V E+  E+  L   G  PR+I+  F+ +     +IG+++GA 
Sbjct: 292 AVMALVVFVALFNTMTMSVTERTREIGTLSALGSYPREIIAGFLREAGLLAVIGSLIGAL 351

Query: 332 LGALLASQLNNL---MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAA 388
             AL+   L  +   MP      +G  L +      V    L  + I L++  + + +  
Sbjct: 352 FTALVTIFLMMVDVQMPPPPGRTEGYPLTIYFSWELVAAAGLSVLLICLVAAFFSARKGV 411

Query: 389 ATQPAEALRY 398
                EAL Y
Sbjct: 412 NKPITEALIY 421



>gi|47096188|ref|ZP_00233787.1|   ABC transporter, permease protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47015436|gb|EAL06370.1|   ABC transporter, permease protein [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 402

 Score =  198 bits (505), Expect = 2e-49
 Identities = 68/430 (15%), Positives = 159/430 (36%), Gaps = 59/430 (13%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M    ++ +  + ++        +  S+L+ +GI +GV +++ ++S+ NG  +E+ + + 
Sbjct: 1   MNVLQSMKMAWKQLKA------SKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMG 54

Query: 61  GLMPQ-AILSSEHGSLNPQQLPETAVK---LDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
            L      + +   + N +   +  +K   +DGV  V+P  +G V        +   ++G
Sbjct: 55  DLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKSSSNKVIG 114

Query: 117 IDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
            +   K   +  +   +     D E G+   ++G  +AS L    GD I           
Sbjct: 115 TNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFG-FGDPI----------- 162

Query: 174 PMGRIPSQRLFNVIGTFAANSEVD----GYEMLVNIEDASRLMRYPAGNITGWRLWL--- 226
                 +   + V+G               ++ + I  A RL++                
Sbjct: 163 GETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAED 222

Query: 227 -----------------DEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGL 269
                            DE  +  + S  ++    +  + ++               +G 
Sbjct: 223 VDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGA 282

Query: 270 LLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILG 329
           + ++ + V    I+  + + V E+  E+ I +  G   R I++ F+++     + G ++G
Sbjct: 283 IAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIG 342

Query: 330 AALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAA 389
             +G   A    ++  I             I    +I   + ++ I ++  + P+ +A+ 
Sbjct: 343 IIIGVSGALIFGSVAGISSG----------ITAGTIIFSFVFSLCIGVIFGIAPANKASK 392

Query: 390 TQPAEALRYE 399
            +P +ALR E
Sbjct: 393 LRPIDALRSE 402



>gi|28870017|ref|NP_792636.1|   macrolide ABC efflux protein MacB [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28853263|gb|AAO56331.1|   macrolide ABC efflux protein MacB [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 668

 Score =  198 bits (503), Expect = 3e-49
 Identities = 53/415 (12%), Positives = 127/415 (30%), Gaps = 50/415 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A  +    +            + L+ +GI +G+ ++V++ ++  G +R +  +I  +   
Sbjct: 277 AFNMAWIALISHR------MRTLLTMLGIIIGITSVVSISAIGEGAKRYVLKDIQSIGSN 330

Query: 66  AILSSEHGSLNPQ----------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I      +                     +L  ++   P+    ++++         + 
Sbjct: 331 TIDIYAGANFGDSRAKSIETLLPSDVAALNQLYYIDSATPVVGRSMLVRYRNVDVDAQLN 390

Query: 116 GIDPAQKDPLTPYLVNVKQTDLEPGKY---NVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+           L        +  +     V+L    A +L                  
Sbjct: 391 GVSSRYFQVRNIQLAAGITFSDQDARRQAQVVVLDHNTAQRL-----------FGPGVNP 439

Query: 173 TPMGRIPSQRLFNVIGTFAANSEV----DGYEMLVNIEDAS-RLMRYPAGNITGWRLWLD 227
                +  +    VIG  + +  +    +   + +  E A+ R++     +    R+   
Sbjct: 440 LGQVILVGKLPCTVIGVTSDHKNLFIAGNTLNLWMPYETAAGRVLGQRHLDSISVRVKDG 499

Query: 228 EPLKVDS------LSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFN 281
            P K         + Q+   +     +       + +  R    ++ L+  + + V    
Sbjct: 500 MPSKAVEEQIKALMLQRHGTKDFFTNNLDSVMQTVQKTSRSLTLLLSLIAVISLVVGGIG 559

Query: 282 IITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN 341
           ++  + + V E+  E+ I    G     I   F+V+     ++G ++G  L   +     
Sbjct: 560 VMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLMGGVIGIGLSYAIGYLFT 619

Query: 342 NLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                    L      +      V+     +  I +L    P+  AA   P EAL
Sbjct: 620 ---------LFVQQWEMVFSLASVVTAFACSTLIGVLFGFVPARNAARLDPIEAL 665



>gi|2983943|gb|AAC07492.1|   hypothetical protein [Aquifex aeolicus VF5]
 gi|15606709|ref|NP_214089.1|   hypothetical protein aq_1585 [Aquifex aeolicus VF5]
 gi|7514463|pir||B70437   conserved hypothetical protein aq_1585 - Aquifex aeolicus
          Length = 394

 Score =  198 bits (503), Expect = 3e-49
 Identities = 106/403 (26%), Positives = 190/403 (47%), Gaps = 15/403 (3%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
             + L + LRY+          F++++S  GI L V A++  L V +GF+ EL+N IL  
Sbjct: 1   MSLYLKVVLRYLFHAKGSSL--FMTFMSFFGIFLSVNAIILTLGVFSGFQDELKNKILSK 58

Query: 63  MPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQK 122
            P  +++  +     +++ E   K   V         +  L S   +    +  ID    
Sbjct: 59  TPHLVIT-LYSDYERERIKEVLEKEKEVEYFLSFVVYNAFLSSGEVIQSVSVKAIDYKDG 117

Query: 123 DPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQR 182
           +        + +     G   +ILG+ +A   G+  GD++ ++ P     TP G IP  +
Sbjct: 118 EFQKFIKRFLTEG----GTKGLILGKGIAEVFGLLVGDEVSLISPFG-IRTPTGVIPKVK 172

Query: 183 LFNVIGTFAANSEVDGYEM-LVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQK-- 239
            F V G F   S    Y +  +N++DA    +   G +    +++ +P + D + ++   
Sbjct: 173 KFRVGGIFYTGSYDKDYAVVYMNLKDAKEFFKRDYG-VNFTEVYIKDPYRADIVKEKVKK 231

Query: 240 -LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
            L E    + W D    LF A+ +EK  +  +L L+V VA+FNI + L + V EK  ++A
Sbjct: 232 ELGERVVVRSWIDLNKPLFNALELEKLGLFFILLLMVVVASFNITSLLFVKVKEKVRDIA 291

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN--NLMPIIGVLLDGAAL 356
           + +T G+  RQ++M+F+  G   G +GAI G     +LA  +N   L+ +   +   + +
Sbjct: 292 VFKTFGMKKRQVLMIFLSLGLFIGTVGAISGVISAYVLAYFINEYKLIRVSEEVYMMSYI 351

Query: 357 PVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           P  I+   V+   L A+ ++ +S+L P+ RA+  +  E LR E
Sbjct: 352 PAHIKLKDVLATLLGALLLSFISSLIPALRASKEKVIEVLRKE 394



>gi|60492532|emb|CAH07303.1|   putative transmembrane permease [Bacteroides fragilis NCTC 9343]
 gi|60681098|ref|YP_211242.1|   putative transmembrane permease [Bacteroides fragilis NCTC 9343]
          Length = 414

 Score =  197 bits (502), Expect = 4e-49
 Identities = 76/420 (18%), Positives = 166/420 (39%), Gaps = 33/420 (7%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSW-LSTIGITLGVMALVTVLSVMNGFERELQNNILGLM 63
           ++ F+  R  R     +     +  ++ IGI +G+  ++  +SV+ GF+ E++N ++G  
Sbjct: 3   LSYFLARRIYRDTDGGKQVSRPAVVIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVIGFG 62

Query: 64  PQAILSSEHGSLNPQ--------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
               +S+     + +         +      L  V  V   +T   ++++  +    V+ 
Sbjct: 63  SHIQISNFDAVGSYETHPVVVNDSMMVALSALPEVKHVQRYSTKPGMIKTDDAFQGMVLK 122

Query: 116 GIDPAQKDPLTPYLV---NVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+ P          +    +           V++ + +A +L +  GD+I          
Sbjct: 123 GVGPEFDPAFFRDHLIEGEIPAFSDTASTNQVVISKAIADRLKLKLGDKIYTYFIQKD-- 180

Query: 173 TPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK 231
                    R   V G +  N SE D   +L ++   +RL  +  G ++G  L + +  K
Sbjct: 181 ------VRARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDYDK 234

Query: 232 VDSL----------SQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFN 281
           ++ +           Q         Q       ++F  + +    + ++L L+V VA F 
Sbjct: 235 LEDITYRIATDTDNKQDIYGGTYYVQSIEQMNPQIFAWLDLLDLNVWVILILMVGVAGFT 294

Query: 282 IITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN 341
           +I+ L ++++E+   + IL+  G     I  VF+         G + G A+G +     +
Sbjct: 295 MISGLLIIILERTQMIGILKALGANDFTIRKVFLWFSVFLIGKGMLWGNAIGIVFCILQS 354

Query: 342 N--LMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              L  +       + +PV++     ++I    +  ++L  + PS+      PA+++RYE
Sbjct: 355 QFGLFKLDPETYYVSMVPVSMNIWLFLLINAGTLLTSVLMLVGPSYLITKINPADSMRYE 414



>gi|34557766|ref|NP_907581.1|   PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN
           [Wolinella succinogenes DSM 1740]
 gi|34483483|emb|CAE10481.1|   PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN
           [Wolinella succinogenes]
          Length = 643

 Score =  197 bits (502), Expect = 4e-49
 Identities = 60/416 (14%), Positives = 146/416 (35%), Gaps = 42/416 (10%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
           + LF  ++      + +   F + L+ +GI +GV +++ +L++ +G +  +   I  +  
Sbjct: 249 LELFEAMK--MAFRSLKMNLFRTVLTLLGIVIGVASVIVMLAIGDGAKNAVLERISAMGT 306

Query: 65  QAILSSE---------HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
             ++            + +    +  E  ++LD +    P     V  +   +     + 
Sbjct: 307 NILVIRPGMPNSRGFSNIATLIPEDMEAIMELDNIIAAMPENKKSVTTRYGNNDQSTSLN 366

Query: 116 GIDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
                        L         D +     V+LG+ +   L        R ++     F
Sbjct: 367 ATSSHFTKVRNWPLGKGVFFTEEDEKSYAKVVVLGKTVEKALFGEEDALGRFILVDNIMF 426

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV 232
             +G + ++         +A+ E +   +LV     S L       +    + +D+  ++
Sbjct: 427 QIIGVMSNRGA-------SASGEDEDDVILVPYTTGS-LHLIGQKFLRNITVAVDDLSRM 478

Query: 233 DSLSQQKLP---------EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNII 283
               ++            E  + ++      ++ Q       ++G + ++ + V    ++
Sbjct: 479 GETEREIHSLLLARHGGIEDFRIRNMASLIEDVTQTQNTLTILLGSIAAISLLVGGIGVM 538

Query: 284 TSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL 343
             + + V E+  E+ I    G   R I+  F+++      +G ++G  +G  +++ +  L
Sbjct: 539 NIMLVSVTERTKEIGIRIATGARMRHILQQFLIEAVVVSALGGLIGVVIGLGVSALIEGL 598

Query: 344 MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                        PV    + ++     A    LL    P+ +AA   P  AL  E
Sbjct: 599 -----------GTPVYYSLMPIVWAFGCAFVTGLLFGYLPARKAARLDPVVALASE 643



>gi|53721660|ref|YP_110645.1|   macrolide-specific ABC-type efflux carrier [Burkholderia
           pseudomallei K96243]
 gi|52212074|emb|CAH38081.1|   macrolide-specific ABC-type efflux carrier [Burkholderia
           pseudomallei K96243]
          Length = 653

 Score =  197 bits (502), Expect = 4e-49
 Identities = 54/413 (13%), Positives = 137/413 (33%), Gaps = 46/413 (11%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A  +    +            + L+ +GI +G+ ++V+++++  G +R + + I  +   
Sbjct: 262 AFRMAWIALVSHR------LRTLLTMLGIIIGITSVVSIVAIGEGAKRYMLDEIGSIGTN 315

Query: 66  AILSSEHGSLNPQQLPETAVKLD-----------GVNRVAPITTGDVVLQSARSVAVGVM 114
             ++   G+       +    L             ++   P T+  ++L+        ++
Sbjct: 316 -TINVYPGADWGDSRADAIQTLVAADAAALADQIYIDSATPETSRSLLLRYRNVDVNALV 374

Query: 115 LGIDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQL-GVNRGDQIRVMVPSAS 170
            G+           L         ++       ++ E    +L G N      V++    
Sbjct: 375 SGVGERFFQVRGMKLAQGIAFGADEVRRQAQVAVIDENTRRKLFGANPNPLGEVILIDNL 434

Query: 171 QFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLDEP 229
               +G   S++        +A  ++    + V    AS RL      +    R+   +P
Sbjct: 435 PCVVIGVTASKK--------SAFGDMKNLNVWVPYTTASGRLFGQRHLDSITVRVRDGQP 486

Query: 230 LKVDS------LSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNII 283
                      + Q+   +     +       + +  +    ++ L+  + + V    ++
Sbjct: 487 SDAAERSLTKLMLQRHGRKDFFTYNMDSVVKTVEKTGQSLTLLLSLIAVISLVVGGIGVM 546

Query: 284 TSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL 343
             + + V E+  E+ I    G     IM  F+V+  +  ++G  +G  L   ++   +  
Sbjct: 547 NIMLVSVTERTREIGIRMAVGARQTDIMQQFLVEAVTVCLMGGAIGIVLSFGMSFVFS-- 604

Query: 344 MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
                  L      +      +    L +  I ++    P+  A+   P +AL
Sbjct: 605 -------LFVDQWKMVFSAASIASAFLCSTLIGVVFGFMPARNASRLDPIDAL 650



>gi|6458175|gb|AAF10066.1|   conserved hypothetical protein [Deinococcus radiodurans]
 gi|7471380|pir||B75512   conserved hypothetical protein - Deinococcus radiodurans  (strain
           R1)
 gi|15805514|ref|NP_294210.1|   hypothetical protein DR0487 [Deinococcus radiodurans R1]
          Length = 395

 Score =  196 bits (498), Expect = 1e-48
 Identities = 102/402 (25%), Positives = 159/402 (39%), Gaps = 28/402 (6%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
            +  +   ++  R           L+ +GI +GVM L+  LS+ NGF   L +  L   P
Sbjct: 13  FSWLLARAHLGRRRTQN------LLTVLGIAVGVMVLIAALSLTNGFSGALVDATLRASP 66

Query: 65  QAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQ------SARSVAVGVMLGID 118
              L+S         L         V    P      +L           V    + G+ 
Sbjct: 67  HLSLNSYTARPPSPDLERLIRSDRRVEAFTPFLADKGLLTRPAEQGRDAGVDFATLFGVT 126

Query: 119 PAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRI 178
           PA    L        +T    G   V+LG  LA  +G   GD +R++             
Sbjct: 127 PAAAQVLQLPPAE-SRTLAALGPGQVLLGAALARSVGAFTGDTVRLLNSQQ--------- 176

Query: 179 PSQRLFNVIGTFAANSE-VDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ 237
             +    V G F   +  +D      ++     L     GN+TG++L L +P +   +  
Sbjct: 177 -RRTELKVAGVFTTGNYLIDSAYAFTSLGTLQGL--QQTGNVTGYQLRLHDPEQAREVGM 233

Query: 238 QK-LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGE 296
                +      W+D  G L   + ++K ++  ++ LIV VAAF I   L L V EK  E
Sbjct: 234 ALTGSQPYAALPWQDIYGTLLDQLALQKRVIAFVVFLIVIVAAFGIANVLTLAVFEKTQE 293

Query: 297 VAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN-NLMPIIGVLLDGAA 355
           +AIL+  G T   I+  F+ +G   G+ G  LG  LG  +A+        + G L    A
Sbjct: 294 IAILRAIGATQGVIVRTFVTEGMVLGLTGLALGNLLGLGIAAYFTVRPFQLPGDLYFITA 353

Query: 356 LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALR 397
           LPV +    ++ +  V +   LL+ L P+ RAA  +PA  LR
Sbjct: 354 LPVQVRWQDLLWVNAVGLVTTLLAALIPARRAAGIEPARVLR 395



>gi|29340150|gb|AAO77944.1|   conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29348247|ref|NP_811750.1|   hypothetical protein BT2838 [Bacteroides thetaiotaomicron VPI-5482]
          Length = 408

 Score =  196 bits (498), Expect = 1e-48
 Identities = 89/408 (21%), Positives = 173/408 (42%), Gaps = 22/408 (5%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M  P   +I  RY+  +        +S +S  G+ L  +ALV  LSV NGF+  + +   
Sbjct: 1   MNFP--FYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVASFFT 58

Query: 61  GLMPQAILSSEHGSLNPQQLPETAV--KLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
              PQ  ++   G +   Q         L  V+        + ++Q     A+ V+ G++
Sbjct: 59  AFDPQLKITIREGKVFDGQDERIRAVCALPEVSVSTETLEENAMVQYKDRQAMVVLKGVE 118

Query: 119 PAQKDPLTPYLVNVKQTDLEPGKYNV---ILGEQLASQLG--VNRGDQIRVMVPSASQ-- 171
              +D      +     +       V   ++G +L S LG  +   D ++V +P  +   
Sbjct: 119 DNFEDLTEIDNILYGAGEFILHDSIVNYGVMGVELVSTLGTGLAFVDPLQVYLPKRNAKV 178

Query: 172 --FTPMGRIPSQRLFNVIGTFAANSE-VDGYEMLVNIEDASRLMRYPAGNITGWRLWLDE 228
               P        L++    F  N +  D   +L +++    L+ Y    ++G  L L  
Sbjct: 179 NMANPGASFNRDYLYSPGVVFVVNQQKYDESYILTSLDFLRNLLDYTT-EVSGIELKLKP 237

Query: 229 PLKVDSLSQQK---LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITS 285
              + S+  +    L +    Q+   ++ ++F+ + +EK +  L L+ I+ +A FN+I S
Sbjct: 238 NTNISSVQSKIEKMLGDDFVVQNRYQQQADVFRIMEIEKLISYLFLTFILMIACFNVIGS 297

Query: 286 LGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL-- 343
           L +++++K+ +V  L++ G + + I  +F+ +G    + GAI G  LG +L         
Sbjct: 298 LSMLILDKKDDVITLRSLGASDKLISRIFLFEGRLISLFGAISGIILGLILCFIQQKFGI 357

Query: 344 --MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAA 389
             +   G      A PV++    V++I +  +A+  LS  YP    + 
Sbjct: 358 ITLGGGGGTFVVDAYPVSVHAWDVVLIFITVLAVGFLSVWYPVRYLSK 405



>gi|20092755|ref|NP_618830.1|   ABC transporter, permease protein [Methanosarcina acetivorans C2A]
 gi|19918048|gb|AAM07310.1|   ABC transporter, permease protein [Methanosarcina acetivorans str.
           C2A]
          Length = 409

 Score =  196 bits (498), Expect = 1e-48
 Identities = 64/403 (15%), Positives = 142/403 (35%), Gaps = 42/403 (10%)

Query: 23  GRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAIL-SSEHGSLNPQQLP 81
            +  S L+T+GI +GV A++   S+   F +   + +  +    I+  S+  ++      
Sbjct: 23  SKLRSALTTLGIVIGVAAVIINASLGASFNQFFTDEVTSVGSNFIIAYSDQPNIFYDSEL 82

Query: 82  ETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGK 141
           E      G++ V+P  T    +          ++G++   ++     +        +   
Sbjct: 83  EMIENTPGISGVSPRKTVSGEISYLSDTKSVSIVGVNGDFQEIQGIEMEEGS-FLTDKDI 141

Query: 142 YNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAA-------NS 194
           Y+ +LG  LA +     G  I         F        ++ F V G             
Sbjct: 142 YSTVLGYDLAKE---EFGRSISHRSTVDIAFRQEDGTLIEKSFKVKGVLEDSKETILGGD 198

Query: 195 EVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLP------------- 241
                 + + I   + +      +        +    + ++S +                
Sbjct: 199 GSTDMIVYIPISVMNEMTG--EEDYGALFAMAESSENIGTVSDEVDKRLARNFGIPQRDI 256

Query: 242 -----EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGE 296
                +     D  D   E         + + +L  + + V +  I+  + + V E+  E
Sbjct: 257 GNDDSKPYVIIDQVDVLEETGALGDALSSFLLVLALVSLFVGSIGIMNIMLVTVTERTRE 316

Query: 297 VAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAAL 356
           + I+++ G +   I  +F+++     + G ++G A+G   A  +   +           L
Sbjct: 317 IGIMKSVGYSSSNIQSLFLLESVMVSVFGGLMGTAIGGFGAYIIEEAL----------KL 366

Query: 357 PVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           P       + +  LV++ + + + LYP+ +AA   P +ALRYE
Sbjct: 367 PPVFPFKLIEIGILVSVLVGVGAGLYPARKAANMNPVDALRYE 409



>gi|48844871|ref|ZP_00299165.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Geobacter metallireducens GS-15]
          Length = 409

 Score =  195 bits (497), Expect = 2e-48
 Identities = 69/428 (16%), Positives = 143/428 (33%), Gaps = 59/428 (13%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           +L I LR +R           + L+ +GI +G+ A++ ++++  G  + + + I  +   
Sbjct: 7   SLLIALRALRVNK------MRALLTMLGIIIGIAAVIAMVAIGAGASKMISDQISSIGSN 60

Query: 66  AILS--------------SEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAV 111
            +L                   +L          +   V  VAP   G   +        
Sbjct: 61  LLLVLPGSTTSGGLRTGAGGTPTLTYDDARAIKAECPSVENVAPTVRGSAQIVYGNQNWS 120

Query: 112 GVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQ 171
            +++G  P         +V V+   L  G+   +     A++  +  G  +   +   + 
Sbjct: 121 TIVMGCTPE--------MVVVRDWSLTTGRNISLSDVDGATKNCL-IGQTVAENLFGDAD 171

Query: 172 FTPMGRIPSQRLFNVIGTFAANSEV-----DGYEMLVNIEDASR--LMRYPAGNITGWRL 224
                    +  F VIG      +          + V +  A R          +    +
Sbjct: 172 PIGKIIRIKKIPFTVIGILDHKGQSPQGTDQDDVIFVPLRTAQRKLFGSQFPNTVGAMMI 231

Query: 225 WLDEPLKVDSLSQQK-------------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLL 271
                  +    ++                     ++  +      Q+ ++   ++G + 
Sbjct: 232 QAKSADVLKKAEEEVTALLDQRHRIGPSRERDFTVRNLSEILAVSEQSSKVMSILLGAVA 291

Query: 272 SLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAA 331
           S+ + V    I+  + + V E+  E+ I    G   R I++ F+ +       G I+G  
Sbjct: 292 SISLVVGGIGIMNIMLVSVTERTREIGIRMAIGAKQRDILLQFLTEAVLLTTAGGIIGMG 351

Query: 332 LGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQ 391
           LG   A  ++ +M            P  I    +I+  L +  + +    YP+ +AA   
Sbjct: 352 LGVAGAMAVSKIMQ----------WPTLISTQAIIIAFLFSAGVGVFFGFYPARKAANLN 401

Query: 392 PAEALRYE 399
           P EALRYE
Sbjct: 402 PIEALRYE 409



>gi|56414005|ref|YP_151080.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Paratypi A str. ATCC 9150]
 gi|56128262|gb|AAV77768.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Paratypi A str. ATCC 9150]
          Length = 648

 Score =  195 bits (497), Expect = 2e-48
 Identities = 54/419 (12%), Positives = 121/419 (28%), Gaps = 52/419 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +    M            + L+ +GI +G+ ++V+++ V +  ++ +  +I  +   
Sbjct: 257 ALSMAWLAMAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTN 310

Query: 66  AILSSEHGSLNPQ----------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I                            K   VN   P  +  + L+           
Sbjct: 311 TIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNAN 370

Query: 116 GIDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+     +                 +     V+L      QL            P+ +  
Sbjct: 371 GVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQL-----------FPNKANV 419

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGY----EMLVNIEDASRLMRYPAGNITGWRLWLDE 228
                +       VIG       + G     ++ +     S  +      +    + + +
Sbjct: 420 VGEVVLVGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRI-MGQSWLNSITVRVKD 478

Query: 229 PLKVDSLSQQK--------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
            +  D   QQ           +     +         +     +  + L+  + + V   
Sbjct: 479 GVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGI 538

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     ++  F+++     ++G  LG +L   +A  L
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAMLVCLVGGALGISLSMFIAFML 598

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +P            +      +    L +    +L    P+  AA   P +AL  E
Sbjct: 599 QLFLPG---------WEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE 648



>gi|29142412|ref|NP_805754.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi Ty2]
 gi|16759815|ref|NP_455432.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29138042|gb|AAO69603.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi Ty2]
 gi|16502108|emb|CAD05344.1|   conserved hypothetical ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|25307490|pir||AF0609   conserved hypothetical ABC transporter ybjZ [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
          Length = 648

 Score =  195 bits (497), Expect = 2e-48
 Identities = 54/419 (12%), Positives = 121/419 (28%), Gaps = 52/419 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +    M            + L+ +GI +G+ ++V+++ V +  ++ +  +I  +   
Sbjct: 257 ALSMAWLAMAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTN 310

Query: 66  AILSSEHGSLNPQ----------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I                            K   VN   P  +  + L+           
Sbjct: 311 TIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNAN 370

Query: 116 GIDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+     +                 +     V+L      QL            P+ +  
Sbjct: 371 GVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQL-----------FPNKANV 419

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGY----EMLVNIEDASRLMRYPAGNITGWRLWLDE 228
                +       VIG       + G     ++ +     S  +      +    + + +
Sbjct: 420 VGEVVLVGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRI-MGQSWLNSITVRVKD 478

Query: 229 PLKVDSLSQQK--------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
            +  D   QQ           +     +         +     +  + L+  + + V   
Sbjct: 479 GVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGI 538

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     ++  F+++     ++G  LG +L   +A  L
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFML 598

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +P            +      +    L +    +L    P+  AA   P +AL  E
Sbjct: 599 QLFLPG---------WEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE 648



>gi|62127100|gb|AAX64803.1|   putative ABC superfamily (atp&memb) transport protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
          Length = 648

 Score =  195 bits (496), Expect = 2e-48
 Identities = 54/419 (12%), Positives = 121/419 (28%), Gaps = 52/419 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +    M            + L+ +GI +G+ ++V+++ V +  ++ +  +I  +   
Sbjct: 257 ALSMAWLAMAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTN 310

Query: 66  AILSSEHGSLNPQ----------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I                            K   VN   P  +  + L+           
Sbjct: 311 TIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNAN 370

Query: 116 GIDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+     +                 +     V+L      QL            P+ +  
Sbjct: 371 GVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQL-----------FPNKANV 419

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGY----EMLVNIEDASRLMRYPAGNITGWRLWLDE 228
                +       VIG       + G     ++ +     S  +      +    + + +
Sbjct: 420 VGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRI-MGQSWLNSITVRVKD 478

Query: 229 PLKVDSLSQQK--------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
            +  D   QQ           +     +         +     +  + L+  + + V   
Sbjct: 479 GVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGI 538

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     ++  F+++     ++G  LG +L   +A  L
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFML 598

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +P            +      +    L +    +L    P+  AA   P +AL  E
Sbjct: 599 QLFLPG---------WEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE 648



>gi|34104014|gb|AAQ60374.1|   probable ABC transporter, ATP-binding protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34498159|ref|NP_902374.1|   probable ABC transporter, ATP-binding protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 644

 Score =  195 bits (496), Expect = 2e-48
 Identities = 57/399 (14%), Positives = 136/399 (34%), Gaps = 38/399 (9%)

Query: 21  RFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ-AILSSEHGSLNPQQ 79
              R  + L+ +GI +G+ ++V+V+++  G    +   I  +  Q   +       + + 
Sbjct: 264 SANRLRTALTMLGIVIGIASVVSVIAIGEGSRDYVLKGIREMGTQTITVFRGKDWGDDKA 323

Query: 80  L---------PETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLV 130
                              V+ V P T     ++         ++G+           L 
Sbjct: 324 DGVRTFLPGDVAALEGEGYVDSVTPETAQAQRIRYRNVDVNASVIGVGRDFFRVQGMKLA 383

Query: 131 NVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVI 187
             +     D+   +  V+L +    +L  +     RV++      T +G +  +      
Sbjct: 384 EGQSFSRDDIHFQRQVVVLDKNSRRKLFGDGEAVGRVILVGMVPATVIGVVAQRDR---- 439

Query: 188 GTFAANSEVDGYEMLVNIEDAS-RLMRYPAGNITGWRLWLDEPLKVDS------LSQQKL 240
                    +  +M +    A+ RL      +    R+   +P K+        L+Q+  
Sbjct: 440 -----GFGGNSLQMWMPYSTAASRLFGQQHFDRFVIRVKDGQPTKLAEKAIGALLTQRHG 494

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
            +     +  +    +  + R    ++ L+  + + V    ++  + + V E+  E+ I 
Sbjct: 495 GKDFFTYNMDEILKTVESSSRALSLLLALVAVISLVVGGIGVMNIMLVSVTERTREIGIR 554

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
              G     ++  F+ +     ++G  +G AL   ++   +         L      +++
Sbjct: 555 MAVGARQGDVLQQFLTEAVLVCLVGGAIGVALSYGVSFVFS---------LFVTEWKMSL 605

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            P  + +    +  I +L    P+  AA   P +AL  E
Sbjct: 606 SPPVIALAVACSSLIGVLFGFLPARNAAKLNPIDALARE 644



>gi|16419454|gb|AAL19878.1|   putative ABC superfamily (atp&memb) transport protein [Salmonella
           typhimurium LT2]
 gi|16764304|ref|NP_459919.1|   putative transport protein [Salmonella typhimurium LT2]
          Length = 648

 Score =  195 bits (496), Expect = 2e-48
 Identities = 54/419 (12%), Positives = 121/419 (28%), Gaps = 52/419 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL +    M            + L+ +GI +G+ ++V+++ V +  ++ +  +I  +   
Sbjct: 257 ALSMAWLAMAANK------MRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTN 310

Query: 66  AILSSEHGSLNPQ----------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I                            K   VN   P  +  + L+           
Sbjct: 311 TIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNAN 370

Query: 116 GIDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+     +                 +     V+L      QL            P+ +  
Sbjct: 371 GVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQL-----------FPNKANV 419

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGY----EMLVNIEDASRLMRYPAGNITGWRLWLDE 228
                +       VIG       + G     ++ +     S  +      +    + + +
Sbjct: 420 VGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRI-MGQSWLNSITVRVKD 478

Query: 229 PLKVDSLSQQK--------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAF 280
            +  D   QQ           +     +         +     +  + L+  + + V   
Sbjct: 479 GVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGI 538

Query: 281 NIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQL 340
            ++  + + V E+  E+ I    G     ++  F+++     ++G  LG +L   +A  L
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFML 598

Query: 341 NNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              +P            +      +    L +    +L    P+  AA   P +AL  E
Sbjct: 599 QLFLPG---------WEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE 648



>gi|23014032|ref|ZP_00053872.1|   COG4591: ABC-type transport system, involved in lipoprotein
           release, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 448

 Score =  195 bits (496), Expect = 2e-48
 Identities = 75/400 (18%), Positives = 163/400 (40%), Gaps = 50/400 (12%)

Query: 4   PVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLM 63
           P+ L I L ++R R         + +S +G++LGV   + + ++M GF+R+    I+ + 
Sbjct: 3   PLGLSIALTHLRHRQRQ------TLVSLLGVSLGVAFFIGISAMMQGFQRDFIARIIDVQ 56

Query: 64  PQAILSS-----------------------------EHGSLNPQQLPETAVKLDGVNRVA 94
           P  I+                                 G    + +  +  ++ GV  VA
Sbjct: 57  PHIIVKDEVRAAPQQAVERAFPDGAVSLRGLKPREEVRGIRGARNMLASLEEMPGV-HVA 115

Query: 95  PITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVN---VKQTDLEPGKYNVILGEQLA 151
           P  +G+++L+         + GI+P ++  +T    +        L      +I+GE +A
Sbjct: 116 PALSGNLLLRFGGKDVSVNVTGINPERERQVTHLEKDLLSGSLDALYTTSNAIIIGEGIA 175

Query: 152 SQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRL 211
           ++ G+ + D I  + P                  V+G F +N  +        +   +++
Sbjct: 176 AKAGIRKDDLISAVSPVG----------VVLKMKVVGIFRSNITLIDNFETYTLLKKAQI 225

Query: 212 MRYPAGNITGWRLWLDEPLKVDSLSQQKLPE-GSKWQDWRDRKGELFQAVRMEKNMMGLL 270
           ++  A  I    L LD+  +  +L+     + G + + W+++   +     ++  +M   
Sbjct: 226 LQNRANIINRLNLRLDDVEQAGTLAAAIERQFGYRSEPWQEQSRNVLGIFVIQNAIMYST 285

Query: 271 LSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGA 330
           +S I+ VA F I   +  +V EK  ++ IL++ G   + +  +F+++G   G+IG ++G 
Sbjct: 286 VSAILIVACFGIFNVISTVVFEKTRDIGILKSMGFRDKDVRRIFVMEGLIVGLIGTVIGW 345

Query: 331 ALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIAL 370
            +G  L   + +L   +   +      +   P    + A 
Sbjct: 346 LMGWGLIEFMASLDFQMEGFIKAQGFVLYRTPKHYAISAA 385



>gi|52144528|ref|YP_082297.1|   ABC transporter, permease [Bacillus cereus ZK]
 gi|51977997|gb|AAU19547.1|   ABC transporter, permease [Bacillus cereus ZK]
          Length = 391

 Score =  195 bits (496), Expect = 2e-48
 Identities = 67/423 (15%), Positives = 158/423 (37%), Gaps = 56/423 (13%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M     + + L  +            S L+ +GI +G+ A++T++S+ +G   + +   L
Sbjct: 1   MNTSENIRMALSSIFAHK------MRSILTMLGIIIGISAIITIISMGDGTNAKFKKE-L 53

Query: 61  GLMPQAILSSEHGSLNP--------QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVG 112
           G      ++  + + +           +      + GV  V P  +  V   +       
Sbjct: 54  GQGKDNEVTIYYNNPDYGTDNAKITADMLNRLQTVPGVKDVYPDVSMKVKASAGSKDVNL 113

Query: 113 VMLGIDPAQK---DPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSA 169
            + G              +   + +++L      VIL E+  ++L              +
Sbjct: 114 DLKGGTGDFMTDSKIKLVHGRELNESELNQAIPAVILNEEAFNKLF---------SGWES 164

Query: 170 SQFTPMGRIPSQRLFNVIGTFAANSEVDGYE--MLVNIEDASRLMRYPAGNITGWRLWLD 227
           +Q+T +      + + ++G +   ++          ++E+A  +           RL + 
Sbjct: 165 NQYTDI----KGKPYKIVGVYETKNDFGMPMPEGYTSLENAPVISGV--NEYDSVRLTMT 218

Query: 228 EPLK-----------VDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA 276
            P +           ++ +   K     + QD  +   +L +++ M K + G + ++ + 
Sbjct: 219 SPTERKNVEKQAVSVLNEMKAPKFEHKFEAQDLGEFTKQLDESIGMMKMVFGGIAAISLL 278

Query: 277 VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALL 336
           V    ++  + + V E+  E+ I +  G T  +++  F+++      +G  +G  LG   
Sbjct: 279 VGGIGVMNIMLVSVTERTREIGIRKALGATRGKVLTQFLIESCILTGLGGFIGFMLGIFF 338

Query: 337 ASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           A  ++            A  P+ +     ++   ++M I ++  L P+ +AA   P E L
Sbjct: 339 AWIVSIF----------AGWPLVVSKELGLLAVGISMLIGIIFGLLPANKAAKLDPIECL 388

Query: 397 RYE 399
           RYE
Sbjct: 389 RYE 391



>gi|20806779|ref|NP_621950.1|   ABC-type transport systems, involved in lipoprotein release,
           permease components [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515240|gb|AAM23554.1|   ABC-type transport systems, involved in lipoprotein release,
           permease components [Thermoanaerobacter tengcongensis
           MB4]
          Length = 391

 Score =  195 bits (496), Expect = 2e-48
 Identities = 71/416 (17%), Positives = 147/416 (35%), Gaps = 52/416 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           AL I +R +            S+L+ +GI +GV A++ ++S+  G  + + + I  +   
Sbjct: 6   ALKIAIRSILSNK------LRSFLTMLGIIIGVTAVIALVSIGQGSTKSVTSQIQSMGSN 59

Query: 66  AILSSEHGSLNPQQL----PETAVKLDGVNRVAPITTGDVVLQSARSVA-VGVMLGIDPA 120
            I+ S  G  +   L      T    + +  V+P+ + +V  +   +     ++ G++  
Sbjct: 60  LIMVSVMGRGSQASLTYEQAMTLKDGNYIKAVSPVISSNVTAKYGNNSVDSAMVNGVNSD 119

Query: 121 QKDPLTPYLVNVKQTDLEPGK---YNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGR 177
            +   +  +   +       +      +LG  +A++L               +       
Sbjct: 120 YQAIRSIQVAEGRFISPMDDEGRNKVAVLGHNVATELF------------GFTDPVGKTI 167

Query: 178 IPSQRLFNVIGTFAANSEV----DGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD 233
             + + F V+G  A         D   + + I+           NI    +    P  V+
Sbjct: 168 KLNGQAFTVVGVLALKGSSIAGSDDDAIFIPIKTM--FYFAKNKNIRQIYIGASNPDTVE 225

Query: 234 SLSQQKL----------PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNII 283
                                   D       +         ++G +  + + V    I+
Sbjct: 226 IAKNMINNHLLEVFKGDTSAFTIIDQSQILSTVNSVTTTLSLLLGGIAGISLLVGGIGIM 285

Query: 284 TSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNL 343
             + + V E+  E+ I +  G   R I++ F+++  +   +G ILG   G +LA  L   
Sbjct: 286 NIMLVSVTERTREIGIRKALGAKKRDILLQFIIESLTLSGLGGILGIIAGYILAVTLGKA 345

Query: 344 MPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           M I                  +++    ++ + L   +YP+ +AA   P EALRYE
Sbjct: 346 MNID----------ANPTLSTILISFSFSVLVGLFFGVYPANKAANLNPIEALRYE 391



>gi|54307852|ref|YP_128872.1|   hypothetical protein PBPRA0649 [Photobacterium profundum SS9]
 gi|46912278|emb|CAG19070.1|   conserved hypothetical protein [Photobacterium profundum]
          Length = 444

 Score =  195 bits (496), Expect = 2e-48
 Identities = 80/447 (17%), Positives = 167/447 (37%), Gaps = 65/447 (14%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
            PV+L      +            S LS + I + V AL +           L+ +    
Sbjct: 11  FPVSLRFAWLNLLRNGR------RSLLSILIIAIAVFALTSAGGFGLYTYESLKESTARD 64

Query: 63  MPQAILSSE------------HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVA 110
                LS              +G  N + L +  +  D +  + P      ++ +     
Sbjct: 65  TGHLTLSQPGYFTQDEDMPLSNGLDNSEALIKQIITDDAIRSIQPRIYFTGLVSNGSKST 124

Query: 111 VGVMLGIDPAQKDPLTPYLV--------NVKQTDLEPGKYNVILGEQLASQLGVNRGDQI 162
           + +  G++  + D   P+L         +V  +  +P +  V+LG  LA  L V+ GD +
Sbjct: 125 IFMGTGVNDREFDMKGPFLDIRAGQSLSDVTSSRYDPAEPQVMLGVDLARNLKVDVGDWV 184

Query: 163 RVMVPSASQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITG 221
            ++  ++          +   FNV G ++    E+D  ++ ++I  A  L+   +  ++ 
Sbjct: 185 TLLATTSDGA------LNAFDFNVRGIYSTGVPELDKRQLYIHITSAQELL--ASNKVST 236

Query: 222 WRLWLDEPLKVDSLSQQK---------------------------LPEGSKWQDWRDRKG 254
             ++L E  + +++ Q+                            L +  +   W+DR  
Sbjct: 237 LSVFLFETAQTNAVQQRISEQLHQLSNSSDLLSNTSEQLSNTSDQLSQPIEITPWQDRAF 296

Query: 255 ELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVF 314
              +   +   + G++ +++  V    +  ++ + V E+  E+  L   G  P +I+  F
Sbjct: 297 FYNKVKDLYDRIFGIMGTVMGLVVFVALFNTMTMTVTERTREIGTLSALGSYPSEIVRGF 356

Query: 315 MVQGASAGIIGAILGA---ALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALV 371
           + +     +IG++LGA   AL  +L   ++  MP      +G  L +      V +  + 
Sbjct: 357 LCEAGLLALIGSMLGAASNALMCVLLLFVDVQMPPPPGRSEGYPLNIYFSFELVALTTIG 416

Query: 372 AMAIALLSTLYPSWRAAATQPAEALRY 398
            M I LL+  + + +       EAL Y
Sbjct: 417 VMFICLLAAFFSARKGVNKPITEALIY 443



>gi|47573265|ref|ZP_00243304.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Rubrivivax gelatinosus PM1]
          Length = 661

 Score =  195 bits (495), Expect = 2e-48
 Identities = 67/420 (15%), Positives = 134/420 (31%), Gaps = 56/420 (13%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A  + LR +R         F S L+ +GI +GV +++ +L++ +G ++E+ N I  +   
Sbjct: 272 AAKMALRSLRAN------LFRSVLTLLGIVIGVGSVIAMLAIGDGAKQEVINRISAMGSN 325

Query: 66  AILSSEHGS---------LNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
            +L                          ++  V    P       L+ + +     + G
Sbjct: 326 LMLVRPGAPNQRGFNSTATLVVADVAAIDQVPNVLAAVPEQNSSATLRYSGADYSTSING 385

Query: 117 IDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
                       +         D        +LG+ +A  L            P  +   
Sbjct: 386 TSSKFPLARQWPVAQGSFFSAEDEASYATVAVLGQTVAKAL-----------FPDGANPV 434

Query: 174 PMGRIPSQRLFNVIGTFAA------NSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLD 227
               + +  LF V+G   A       S+ D   + V    +S  +           + +D
Sbjct: 435 GEYVLVNNLLFQVVGVMTARGASPMGSDQDD-IVFVPYATSSLRLSGQRFMRN-VTVAVD 492

Query: 228 EPLKVDSLSQQKLPE--------GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAA 279
           +  ++D   +               + ++         Q       ++G + ++ + V  
Sbjct: 493 DVSRIDETQEAVESLLLDRHGVVDFQIRNMASIIEATEQTQNTLTILLGSIAAISLLVGG 552

Query: 280 FNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQ 339
             ++  + + V E+  E+ I    G   R IM  F+++      IG  +G   G   A+ 
Sbjct: 553 IGVMNIMLVSVTERTREIGIRMATGARERNIMQQFLIEAMVVSAIGGAVGVVGGLATAAA 612

Query: 340 LNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
           +                PV      V++    A    L+    P+ +AA   P  AL  E
Sbjct: 613 IGAF-----------GTPVQYSLAPVLLAFGCAFGTGLVFGWLPARKAAQLDPVVALAAE 661



>gi|45358434|ref|NP_987991.1|   hypothetical protein MMP0871 [Methanococcus maripaludis S2]
 gi|44921192|emb|CAF30427.1|   conserved hypothetical membrane protein [Methanococcus maripaludis
           S2]
          Length = 397

 Score =  195 bits (495), Expect = 2e-48
 Identities = 66/408 (16%), Positives = 146/408 (35%), Gaps = 42/408 (10%)

Query: 15  RGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGS 74
                    +  S+L+ IG+ +G++A+V+++S+  G +  + + I  +    I      +
Sbjct: 9   FAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANVISVLPSQN 68

Query: 75  L--------NPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLT 126
                               + GV  V     G   L+       G +L I+P++   + 
Sbjct: 69  FGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSKFTHVY 128

Query: 127 PYLVN----VKQTDLEPGKYNVILGEQLASQLG---VNRGDQIRVMVPSASQFTPMGRIP 179
                      +   +  KY+ ++G  LA+      ++ GD+I +               
Sbjct: 129 SKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIGDKITI--------------- 173

Query: 180 SQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKV------- 232
           + + + VIG             ++  +D    +           + +     V       
Sbjct: 174 NDKKYKVIGILEETGNPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEI 233

Query: 233 -DSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVM 291
            D L   +  E             +     +    +  +  + + V A  I  ++ + ++
Sbjct: 234 KDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSIL 293

Query: 292 EKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLL 351
           E++ ++ IL+  G     I+ +F+V+    G+ G I+G  LG L+A  +  +  I G  L
Sbjct: 294 ERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGL 353

Query: 352 DGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
               +   I    ++ + + +  + +LS  +P+   A   P + LR E
Sbjct: 354 ----IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397



>gi|48731629|ref|ZP_00265373.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Pseudomonas fluorescens PfO-1]
          Length = 653

 Score =  195 bits (495), Expect = 3e-48
 Identities = 56/415 (13%), Positives = 134/415 (32%), Gaps = 50/415 (12%)

Query: 6   ALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ 65
           A  +    +            + L+ +GI +G+ ++V++ ++  G +R +  +I  +   
Sbjct: 262 AFNMAWVALISHR------MRTLLTMLGIVIGITSVVSISAIGEGAKRYVLKDIQAIGSN 315

Query: 66  AILSSEHGSLNPQQLPET----------AVKLDGVNRVAPITTGDVVLQSARSVAVGVML 115
            I      S    +                +L  V+   P+   +++L+         + 
Sbjct: 316 TIDIYSGTSFGDSRSAAIETLVPADVTALNQLYYVDSATPVVGRNLLLRYRNIDLDAQVN 375

Query: 116 GIDPAQKDPLTPYLVNVKQTDLEPGKY---NVILGEQLASQLGVNRGDQIRVMVPSASQF 172
           G+           + +         +     V++      +L     D +  ++   +  
Sbjct: 376 GVSDLYFQVRGIKMESGIPFSESDARRQAQVVVIDHNTRHRLFGEGVDPLGQVILIGNL- 434

Query: 173 TPMGRIPSQRLFNVIGTFAANSEVDGY----EMLVNIEDAS-RLMRYPAGNITGWRLWLD 227
                        VIG  A N  +        + V  E A+ RL+     +    R+   
Sbjct: 435 ----------PCTVIGVAAENKNIFSSSKSLNVWVPYETAAGRLLGQRYLDSISVRIKDG 484

Query: 228 EPLKVDS------LSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFN 281
           +P KV        + Q+   +     +       + +  R    ++ L+  + + V    
Sbjct: 485 QPSKVVEDNVNKLMLQRHGTKDFFTNNLDSVMQTVQKTSRSLALLLSLIAVISLVVGGIG 544

Query: 282 IITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLN 341
           ++  + + V E+  E+ I    G     I   F+V+     ++G  +G +L   +    +
Sbjct: 545 VMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLLGGAIGISLSYAIGHLFS 604

Query: 342 NLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             +             +      V+   + +  I ++    P+  A+   P EAL
Sbjct: 605 LFIK---------EWEMVFSLTSVLTAVICSTLIGIVFGFVPARNASRLDPIEAL 650



>gi|46906427|ref|YP_012816.1|   ABC transporter, permease protein [Listeria monocytogenes str. 4b
           F2365]
 gi|47092878|ref|ZP_00230661.1|   ABC transporter, permease protein [Listeria monocytogenes str. 4b
           H7858]
 gi|47018782|gb|EAL09532.1|   ABC transporter, permease protein [Listeria monocytogenes str. 4b
           H7858]
 gi|46879691|gb|AAT02993.1|   ABC transporter, permease protein [Listeria monocytogenes str. 4b
           F2365]
          Length = 402

 Score =  194 bits (494), Expect = 3e-48
 Identities = 69/430 (16%), Positives = 159/430 (36%), Gaps = 59/430 (13%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M    ++ +  + ++        +  S+L+ +GI +GV +++ ++S+ NG  +E+ + + 
Sbjct: 1   MNVLQSMKMAWKQLKA------SKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMG 54

Query: 61  GLMPQ-AILSSEHGSLNPQQLPETAVK---LDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
            L      + +   + N +   +  +K   +DGV  V+P  +G V        +   ++G
Sbjct: 55  DLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIG 114

Query: 117 IDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
            +   K   +  +   +     D E G+   ++G  +AS L    GD I           
Sbjct: 115 TNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFG-FGDPI----------- 162

Query: 174 PMGRIPSQRLFNVIGTFAANSEVD----GYEMLVNIEDASRLMRYPAGNITGWRLWL--- 226
                 +   + V+G               ++ + I  A RL++                
Sbjct: 163 GETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAED 222

Query: 227 -----------------DEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGL 269
                            DE  +  + S  ++    +  + ++               +G 
Sbjct: 223 VDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGA 282

Query: 270 LLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILG 329
           + ++ + V    I+  + + V E+  E+ I +  G   R I++ F+++     + G I+G
Sbjct: 283 IAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGIIG 342

Query: 330 AALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAA 389
             +G   A    ++  I             I    +I   + ++ I ++  + P+ +A+ 
Sbjct: 343 IIIGVSGALIFGSVAGISSG----------ITAGTIIFSFVFSLCIGVIFGIAPANKASK 392

Query: 390 TQPAEALRYE 399
            +P +ALR E
Sbjct: 393 LRPIDALRSE 402



>gi|52008079|ref|ZP_00335456.1|   COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Thiobacillus denitrificans ATCC 25259]
          Length = 400

 Score =  194 bits (494), Expect = 4e-48
 Identities = 68/426 (15%), Positives = 149/426 (34%), Gaps = 64/426 (15%)

Query: 7   LFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQA 66
           L + LR +R           S+L+ +GI +GV A+V ++++ NG  R + + I  +    
Sbjct: 6   LLLALRAIRRN------LMRSFLTVLGIVIGVAAVVIMVTLGNGATRSVSDQISSMGSNL 59

Query: 67  ILSSEH----------GSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLG 116
           ++               +           ++     VAP+ +  V           V+ G
Sbjct: 60  LMVRPGQRYGPGAEAAPNFKLADAEAIRNQISAAEAVAPVVSMSVTAVYQVRNWSTVVTG 119

Query: 117 IDPAQKDPLTPYLVNVKQT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFT 173
            +          +   +     +   GK   ++GE +  +L                   
Sbjct: 120 SNNDYFAAGNWEIAAGRSFNDAEERAGKAVCVIGESVREKLF--------------GGQN 165

Query: 174 PMGRIPSQRLF--NVIGTFAANSEVD-----GYEMLVNIEDASRLMRYPAGNITGWRLWL 226
           P+G     + F   VIG      +          +++ +    R +      +    + +
Sbjct: 166 PVGSDIRIKQFSCEVIGLLKPKGQSAMGSDQDDTIVMPLRTVQRRLAGSQD-VNRLSVSV 224

Query: 227 DEPLKVDSLSQQK-------------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSL 273
                +D    Q                +  +  D R     L    R+   ++G + ++
Sbjct: 225 RAGASIDVAKDQLTLLLRERRGIADNEEDDFRVMDTRQIAETLTGTTRVLTMLLGAVAAV 284

Query: 274 IVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALG 333
            + V    I+  + + V E+  E+ I    G   R++++ F+++      +G ++G A+ 
Sbjct: 285 SLLVGGIGIMNIMLVSVTERTREIGIRLAIGALEREVLLQFLIEAVVLASLGGLVGIAIA 344

Query: 334 ALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPA 393
              +  L  +M I+ +           +P   ++    + AI ++   +P+ RAA   P 
Sbjct: 345 TATSIFLAGMMGILYL----------FDPAINLLSFFFSAAIGVVFGYFPARRAAGLNPI 394

Query: 394 EALRYE 399
           +ALR+E
Sbjct: 395 DALRHE 400



>gi|15156928|gb|AAK87586.1|   AGR_C_3336p [Agrobacterium tumefaciens str. C58]
 gi|25518982|pir||A97579   hypothetical protein AGR_C_3336 [imported] - Agrobacterium
           tumefaciens (strain C58, Cereon)
 gi|15889120|ref|NP_354801.1|   hypothetical protein AGR_C_3336 [Agrobacterium tumefaciens str.
           C58]
          Length = 420

 Score =  193 bits (491), Expect = 7e-48
 Identities = 57/427 (13%), Positives = 144/427 (33%), Gaps = 53/427 (12%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M+   +  + LR +            S+L+ +G+ +GV A++ ++++ NG   ++++ + 
Sbjct: 19  MFFETS-RLALRAISRN------LLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELS 71

Query: 61  GLMPQAILSSEHG-----------SLNPQQLPETAVKLDGVNRVAPITTGDV-VLQSARS 108
            L    +                   + + +     ++ G+  VAP        +     
Sbjct: 72  RLGTNMLFVRPGQFGPGRASTEAKRFDDRDVEAIRNQISGIRAVAPQNRSSAATVIFGGK 131

Query: 109 VAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYN---VILGEQLASQLGVNRGDQIRVM 165
                ++G            +   +       +      I+GE +  +L        + +
Sbjct: 132 NHQTSVIGTTNDYLIAQDWTIALGRDFQPAEDRGGQIGCIIGETVRQELFGAENPVGQTI 191

Query: 166 VPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLW 225
             S      +G +  +         +   +     +++ ++   R +      I+   + 
Sbjct: 192 RVSNISCPVIGVLARKGQ-------SGLGDDQDDTIIMPLKIHQRRIGGTT-TISSIMVS 243

Query: 226 LDEPLKVDSLSQQK-------------LPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLS 272
             + +    +                   +     D       +     +   ++G + +
Sbjct: 244 AQDGVSTAKVQSDLQNLLRERRRINIGREDDFTVNDMTQIASAMTGTTTLLTGLLGAVAA 303

Query: 273 LIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAAL 332
           + + V    I+  + + V E+  E+ I    G   +Q++  F+V+       G I+G   
Sbjct: 304 VSLLVGGIGIMNIMLVSVTERTREIGIRLAIGALEKQVLTQFLVEAVMLSAFGGIVGILT 363

Query: 333 GALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP 392
           G  LA  + + +           +P    P  + +    + AI ++   +P+ RAA+  P
Sbjct: 364 GLGLAYSVVSFLN----------VPFVTSPSIIFLAFAFSAAIGVIFGYFPARRAASLSP 413

Query: 393 AEALRYE 399
            EALR+E
Sbjct: 414 IEALRHE 420



>gi|50086114|ref|YP_047624.1|   macrolide transport protein (ABC superfamily, atp_bind
           (N-terminal), membrane (C-terminal)) [Acinetobacter sp.
           ADP1]
 gi|49532090|emb|CAG69802.1|   macrolide transport protein (ABC superfamily, atp_bind
           (N-terminal), membrane (C-terminal)) [Acinetobacter sp.
           ADP1]
          Length = 664

 Score =  193 bits (490), Expect = 1e-47
 Identities = 56/398 (14%), Positives = 139/398 (34%), Gaps = 38/398 (9%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQ-AILSSEHGSLNPQ---- 78
           R  ++L+ +GI +G+ ++VTV+++ NG ++++  NI  L      +    G  +      
Sbjct: 283 RMRTFLTMLGIIIGIASVVTVVALGNGSQKQILENISSLGTNTITVFQGRGFGDNSKTAN 342

Query: 79  ------QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNV 132
                    +       V  V+P+ +    ++   + A   + G+     D       + 
Sbjct: 343 FKTLVPSDADALSSQPYVTAVSPMVSSSKTIRYKENEATATINGVSNDYFDVKGLTFKDG 402

Query: 133 KQTDLEPGKY---NVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGT 189
           +  D    +    +V++      Q   +  + I        Q   +G +P++ +  V   
Sbjct: 403 QSFDQRSVRDLTQDVVIDTNTQKQFFTDGSNPI-------GQVVLLGSVPARIIGIVEPQ 455

Query: 190 FAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDS--------LSQQKLP 241
            ++    D   + +        M     N+    + +++     +        L+ +   
Sbjct: 456 TSSMGSDDSLNVYMPYTTVMSRM-LGQSNVRNIIVRINDQYSTSAAENAIVNLLTLRHGQ 514

Query: 242 EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQ 301
           +     +    +  + +       ++  +  + + V    ++  + + V E+  E+ +  
Sbjct: 515 QDIFTMNSDSIRQTIEKTTSTMTLLVSAIAVISLIVGGIGVMNIMLVSVTERTQEIGVRM 574

Query: 302 TQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAIE 361
             G     I+  F+++     +IG +LG  L   L   +N +              VA  
Sbjct: 575 AVGARQSDILQQFLIEAILVCLIGGVLGVLLSLGLGQLINKVAAGN--------FAVAYS 626

Query: 362 PLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
              ++   + +  I ++    P+  AA   P  AL  E
Sbjct: 627 TTSIVAAFVCSTLIGVVFGFLPARNAAQLDPVAALSRE 664



>gi|47777853|ref|YP_017432.2|   abc transporter, permease protein, putative [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49476920|ref|YP_035051.1|   ABC transporter, permease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|49183782|ref|YP_027034.1|   ABC transporter, permease protein, putative [Bacillus anthracis
           str. Sterne]
 gi|30260939|ref|NP_843316.1|   ABC transporter, permease protein, putative [Bacillus anthracis
           str. Ames]
 gi|21398758|ref|NP_654743.1|   DUF214, Predicted permease [Bacillus anthracis str. A2012]
 gi|30254388|gb|AAP24802.1|   ABC transporter, permease protein, putative [Bacillus anthracis
           str. Ames]
 gi|49328476|gb|AAT59122.1|   ABC transporter, permease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|47551558|gb|AAT29907.2|   ABC transporter, permease protein, putative [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49177709|gb|AAT53085.1|   ABC transporter, permease protein, putative [Bacillus anthracis
           str. Sterne]
          Length = 391

 Score =  192 bits (489), Expect = 1e-47
 Identities = 70/423 (16%), Positives = 159/423 (37%), Gaps = 56/423 (13%)

Query: 1   MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
           M     + + L  +            S L+ +GI +G+ A++T++S+ +G   + +   L
Sbjct: 1   MNTSENIRMALSSIFAHK------MRSILTMLGIIIGISAIITIISMGDGTNAKFKKE-L 53

Query: 61  GLMPQAILSSEHGSLNP--------QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVG 112
           G      ++  + + +           +      + GV  V P  +  V   +       
Sbjct: 54  GQGKDNEVTIYYNNPDYGTDNAKITADMLNRLQTVPGVKDVYPDVSMKVKASAGSKDVNL 113

Query: 113 VMLGIDPAQK---DPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSA 169
            + G   A          +   +  ++L      VIL E+  ++L              +
Sbjct: 114 DLKGGTGAFMTDSKIKLVHGRELNDSELNQAIPAVILNEEAFNKLF---------SGWES 164

Query: 170 SQFTPMGRIPSQRLFNVIGTFAANSEVDGYE--MLVNIEDASRLMRYPAGNITGWRLWLD 227
           +Q+T +      + + ++G +   ++          ++E+A  +           RL + 
Sbjct: 165 NQYTDI----KGKPYKIVGVYETKNDFGMPMPEGYTSLENAPVISGVTE--YDSVRLTMT 218

Query: 228 EPLKVDSLSQQ-----------KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA 276
            P +  S+ +Q           K     + QD  +   +L +++ M K + G + ++ + 
Sbjct: 219 SPTERKSVEKQAVSVLNEMKAPKFEHKFEAQDLGEFTKQLDESIGMMKMVFGGIAAISLL 278

Query: 277 VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALL 336
           V    ++  + + V E+  E+ I +  G T  +++  F+++      +G  +G  LG   
Sbjct: 279 VGGIGVMNIMLVSVTERTREIGIRKALGATRGKVLTQFLIESCILTGLGGFIGFMLGIFF 338

Query: 337 ASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
           A  ++            A  P+ +     ++   ++M I ++  L P+ +AA   P E L
Sbjct: 339 AWIVSIF----------AGWPLVVSKELGLLAVGISMLIGIIFGLLPANKAAKLDPIECL 388

Query: 397 RYE 399
           RYE
Sbjct: 389 RYE 391



>gi|59713919|ref|YP_206694.1|   ABC transporter permease protein [Vibrio fischeri ES114]
 gi|59482167|gb|AAW87806.1|   ABC transporter permease protein [Vibrio fischeri ES114]
          Length = 422

 Score =  192 bits (489), Expect = 1e-47
 Identities = 79/427 (18%), Positives = 161/427 (37%), Gaps = 46/427 (10%)

Query: 4   PVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLM 63
           P +L +    +            S LS + IT+ V AL +           L+ +     
Sbjct: 9   PYSLRLAWLNLLRNGR------RSALSILIITITVFALTSAGGFGLYTYDSLKESTARDT 62

Query: 64  PQAILSSE------------HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAV 111
               LS              +G  +  +L  T +K D V  V P      ++ +     +
Sbjct: 63  GHLTLSQPGYFESDEEMPLSNGLSDTSELIRTMMKYDEVRGVQPRIDFTGLISNGVKSTI 122

Query: 112 GVMLGIDPAQKDPLTPYLV--------NVKQTDLEPGKYNVILGEQLASQLGVNRGDQIR 163
            +  G++  + D   P+L         ++  +  +  +  ++LG  LA  L V+ GD + 
Sbjct: 123 FMGTGVNDREFDMKGPFLDMRSGKTLTDITSSRYDVMEPEIMLGVDLARNLNVSVGDWVT 182

Query: 164 VMVPSASQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGNITGW 222
           ++  ++          +   F V GT++    E+D  ++ ++I+ A  L+   +  ++  
Sbjct: 183 ILATTSEGA------LNAFDFKVHGTYSTGVPELDKRQLYIHIDSAQELL--LSEKVSTL 234

Query: 223 RLWLDEPLKVDSLSQQKLPE--------GSKWQDWRDRKGELFQAVRMEKNMMGLLLSLI 274
            ++L +  K   L Q+   E          +   W++R     +   +   + G++  ++
Sbjct: 235 SVFLFDTEKTAELHQRLAQELETMPLDYDVEITPWQERAFFYNKVKDLYDLIFGVMGFVM 294

Query: 275 VAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILG---AA 331
             V    +  ++ + V E+  E+  L   G  P +I+  F+ +     +IG +LG    A
Sbjct: 295 GLVVFVALFNTMTMSVTERTREIGTLSALGSYPNEIIHSFLREAGLLAVIGVVLGAVMTA 354

Query: 332 LGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQ 391
           L  +L   ++  MP      DG  L +      V    +  + I LL+    + +     
Sbjct: 355 LTTILLLVVDVQMPPPPGRTDGYPLNIYFSFELVAYAGVGVVCICLLAAYLSAKKGVKKP 414

Query: 392 PAEALRY 398
             EAL Y
Sbjct: 415 ITEALIY 421



>gi|16125183|ref|NP_419747.1|   hypothetical protein CC0931 [Caulobacter crescentus CB15]
 gi|13422203|gb|AAK22915.1|   conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|25400111|pir||G87364   conserved hypothetical protein CC0931 [imported] - Caulobacter
           crescentus
          Length = 401

 Score =  192 bits (489), Expect = 1e-47
 Identities = 75/419 (17%), Positives = 164/419 (39%), Gaps = 48/419 (11%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
            A  +  RY+    +       + L   G+ LGV   + + +++ G    L + + G   
Sbjct: 2   FAFKVARRYLLSNPSQ------TLLLIAGVALGVTVFIFITALIAGLAVRLTDQVTGNSA 55

Query: 65  QAILSS-------------------------EHGSLNPQQLPETAVKLDGVNRVAPITTG 99
              L                                +   + +       V+ ++P  +G
Sbjct: 56  HVSLQPATRVARVLAGPDLPVESVALVSTFQRQQIRDWPMVIDLLRANPEVSAISPQISG 115

Query: 100 DVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRG 159
              L  + +VA   +LG++P   D ++    N+ + D + G   +++G ++A +LG+  G
Sbjct: 116 SAFLVRSEAVAPVAVLGVEPQGIDAISRITPNIIEGDGDLGANGLLIGVRMAEELGLGAG 175

Query: 160 DQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDASRLMRYPAGN 218
             + +      +          R   V G F      +D     ++++ A  L   P G 
Sbjct: 176 QSVLLRTERGVE----------RQLTVRGVFRTGLQSLDERVAFLSLQTARPLFDLPEG- 224

Query: 219 ITGWRLWLDEPLKVDSLSQQKLP-EGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAV 277
           +T   + L +P    + ++      G +   W+++   L  A++ +     ++    +  
Sbjct: 225 VTNIEVKLKDPQDARATARFLGEATGLRATPWQEKNVGLEDALKAQGQTGTMIQIFSLIS 284

Query: 278 AAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLA 337
               + ++L L    ++ EV I++  G+    I+ VF++QG   G++GA++G A G  L 
Sbjct: 285 IIIGVASALVLSAYRRRSEVGIMRAFGVPGGFILWVFLLQGLLIGLVGALIGCASGYGLC 344

Query: 338 SQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEAL 396
             L ++    G     + LP+A          ++    A+++++ P+  A+   P EA+
Sbjct: 345 IWLESITRPDG----TSILPIAPRQGGYAAALVLTTLGAVIASILPARSASKIDPLEAI 399



>gi|50119829|ref|YP_048996.1|   macrolide-specific ABC-type efflux carrier [Erwinia carotovora
           subsp. atroseptica SCRI1043]
 gi|49610355|emb|CAG73799.1|   macrolide-specific ABC-type efflux carrier [Erwinia carotovora
           subsp. atroseptica SCRI1043]
          Length = 650

 Score =  192 bits (488), Expect = 2e-47
 Identities = 52/401 (12%), Positives = 131/401 (32%), Gaps = 46/401 (11%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLM-PQAILSSEHGSLNPQ---- 78
           R  ++L+ +GI +G+ ++V+V+++  G + ++  NI  +      +    G  +      
Sbjct: 271 RMRTFLTMLGIIIGIASVVSVVALGKGSQEQVLANINSMGTSTLEIFPGKGFGDMDASAI 330

Query: 79  -----QLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVK 133
                   +   +   V+ V P  +  V ++         + G+           L    
Sbjct: 331 QTLRASDIQPLTQQPYVHSVTPSVSTSVTMRYGNIAVSASISGVGEQFFTVRGYTLERGV 390

Query: 134 QT---DLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTF 190
                 ++    + ++ +    +L            P          +       +IG  
Sbjct: 391 LFPRSSVDELTQDAVIDKNTRDKL-----------FPHGEDPIGQVILVGSLPVRIIGVV 439

Query: 191 AAN----SEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLK--------VDSLSQQ 238
           + N       +   + V      + M      +    + + + +          D L Q+
Sbjct: 440 SKNQGGFGSDENLNVWVPYTTVMKRM-VGQSYLKSITVRVKDNVDMSIAEQRITDLLMQR 498

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              +     +    +  + +       ++ ++  + + V    ++  + + V E+  E+ 
Sbjct: 499 HGTKDFFIMNTDSIRQMIEKTTTTLTLLVSMIALISLLVGGIGVMNIMLVSVTERTREIG 558

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           +    G     IM  F+++     + G I G AL   +      L     ++   ++   
Sbjct: 559 VRMAVGARTSDIMQQFLIEAVLVCLFGGIAGVALSLAIGVLFAQLSSNFAMIYSSSS--- 615

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 +I   L +  I ++   +P+ RAA  +P  AL  E
Sbjct: 616 ------IIAAFLCSSLIGIIFGFFPARRAARMEPIHALERE 650



>gi|30018973|ref|NP_830604.1|   ABC transporter permease protein [Bacillus cereus ATCC 14579]
 gi|29894515|gb|AAP07805.1|   ABC transporter permease protein [Bacillus cereus ATCC 14579]
          Length = 397

 Score =  192 bits (488), Expect = 2e-47
 Identities = 69/417 (16%), Positives = 155/417 (37%), Gaps = 55/417 (13%)

Query: 7   LFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQA 66
           + + L  +            S L+ +GI +G+ A++T++S+ +G   + +   LG     
Sbjct: 12  IRMALSSIFAHK------MRSILTMLGIIIGISAIITIISMGDGTNAKFKKE-LGQGKDN 64

Query: 67  ILSSEHGSLNP--------QQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGID 118
            ++  + + +           +      + GV  V P  +  V   +        + G  
Sbjct: 65  EVTIYYNNPDYGTDSAKITPDMLNRLQTVPGVKDVYPDVSMKVKASAGSKDVNLDLKGGT 124

Query: 119 PAQK---DPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPM 175
            A          +   +  ++L      VIL E+  ++L             S  +    
Sbjct: 125 GAFMTDSKIKLVHGRELNDSELNQAIPAVILNEEAFNKL-----------FSSGWESNQY 173

Query: 176 GRIPSQRLFNVIGTFAANSEVDGYE--MLVNIEDASRLMRYPAGNITGWRLWLDEPLKVD 233
             I   + + ++G +   ++          ++E+A  +           RL +  P +  
Sbjct: 174 TDI-KGKPYKIVGVYETKNDFGMPMPEGYTSLENAPVISGV--NEYDSVRLTMTSPTERK 230

Query: 234 SLSQQ-----------KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNI 282
           S+ +Q           K     + QD  +   +L +++ M K + G + ++ + V    +
Sbjct: 231 SVEKQAVSVLNEMKAPKFEHKFEAQDLGEFTKQLDESIGMMKMVFGGIAAISLLVGGIGV 290

Query: 283 ITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNN 342
           +  + + V E+  E+ I +  G T  +++  F+++      +G  +G  LG   A  ++ 
Sbjct: 291 MNIMLVSVTERTREIGIRKALGATRGKVLTQFLIESCILTGLGGFIGFMLGIFFAWIVSI 350

Query: 343 LMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                      A  P+ +     ++   ++M I ++  L P+ +AA   P E LRYE
Sbjct: 351 F----------AGWPLVVSKELGLLAVGISMLIGIIFGLLPANKAAKLDPIECLRYE 397



>gi|52841086|ref|YP_094885.1|   ABC transporter, permease protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54296871|ref|YP_123240.1|   hypothetical protein lpp0912 [Legionella pneumophila str. Paris]
 gi|52628197|gb|AAU26938.1|   ABC transporter, permease protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750656|emb|CAH12063.1|   hypothetical protein [Legionella pneumophila str. Paris]
          Length = 416

 Score =  192 bits (488), Expect = 2e-47
 Identities = 89/429 (20%), Positives = 181/429 (42%), Gaps = 51/429 (11%)

Query: 3   QPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGL 62
             + L I L+++  R         S +S +GI LGV   +T+ S+M G E++    ++  
Sbjct: 1   MKLFLKIALKHLLARKRQ------SLVSLMGIVLGVAFFLTISSLMQGSEKDFIKRLVDN 54

Query: 63  MPQAILSSEHGSLNPQQLPE-------TAVKLDGVNR----------------------V 93
            P   +  E+ +   Q + +           +  +                        +
Sbjct: 55  SPHITIIDEYRNPRIQPIQQLHTHGAIEIRSVKPLTEPRGIRGYEQTINNLSLTIPGIVI 114

Query: 94  APITTGDVVLQSARSVAVGVMLGIDPAQKDPLT---PYLVNVKQTDLEPGKYNVILGEQL 150
           +P+  G  ++  A       + G+ P +   ++    Y+ +    DL      ++LG +L
Sbjct: 115 SPVLIGQALISYAGKDYSVTLNGMIPEEIKKVSTIENYMTSGSIDDLIVNPDGIVLGSEL 174

Query: 151 ASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYEMLVNIEDAS 209
             +L + + D I V  P+             R F ++G F    S+ D  +  ++I+ A 
Sbjct: 175 LRKLSLTKDDNITVTAPNG----------QIRTFKILGVFRTGRSDFDTNQAFISIKRAQ 224

Query: 210 RLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPE-GSKWQDWRDRKGELFQAVRMEKNMMG 268
            L+  P        + L  P +   ++ Q   + G K   W+++  +L   + +   +M 
Sbjct: 225 ALLNRP-NRSNNIIIKLPNPYQAYDIAAQIEKQIGYKTISWQEKSEDLLNTLVIRNIIMY 283

Query: 269 LLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAIL 328
            ++S ++ VAAF I   +  +VMEK  ++AIL++ G     I  +F+++G   G++G +L
Sbjct: 284 SVVSAVLIVAAFGIYNVISTVVMEKHRDIAILKSIGFQKHDIQFIFIIEGFLLGLVGCLL 343

Query: 329 GAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAA 388
           G  LG+ L   L  +        +   +P+    LQ ++    AM+ ++++ + P+ +AA
Sbjct: 344 GLPLGSGLMYSLMQVQFKPPGSSELINMPLDWSYLQFVIATAFAMSASIIAAVLPAHKAA 403

Query: 389 ATQPAEALR 397
              P + LR
Sbjct: 404 LVHPVDILR 412



>gi|52425184|ref|YP_088321.1|   hypothetical protein MS1129 [Mannheimia succiniciproducens MBEL55E]
 gi|52307236|gb|AAU37736.1|   unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 643

 Score =  192 bits (488), Expect = 2e-47
 Identities = 57/401 (14%), Positives = 128/401 (31%), Gaps = 47/401 (11%)

Query: 24  RFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQA-ILSSEHGSLNPQQ--- 79
           +  S L+ +GI +G+ ++V+V+++ NG ++++ +NI GL      + +  G  + +    
Sbjct: 265 KMRSLLTMLGIIIGITSVVSVVALGNGSQQKILSNISGLGTNTMTIFNGTGFGDRRAEQM 324

Query: 80  ------LPETAVKLDGVNRVAPITTGDVVLQSARS-VAVGVMLGIDPAQKDPLTPYLVNV 132
                       K   V  V P ++   +L           + GI     D     L   
Sbjct: 325 QNLTVNDANALAKQSYVQNVTPNSSSSGLLIYGNQSFTSTNLKGIGEQYFDVEGMTLKQG 384

Query: 133 KQ---TDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGT 189
           +     ++       +L E                + P+ +    +      R F +IG 
Sbjct: 385 RSITAQEVRDNAQVALLDESSKKS-----------IFPNDNPIDKIVMFAK-RPFRIIGV 432

Query: 190 FAA---NSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQ--------Q 238
            A     +      +          +      I    + + + +      +        +
Sbjct: 433 VADRQMGAASSSLNIYAPYTTVMNKV-TGGTKIDSITVKIADNVNTAVAEKSLTEYLTVR 491

Query: 239 KLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVA 298
              +     +    K  +       K ++  +  + + V    ++  + + V E+  E+ 
Sbjct: 492 HGKKDFFIMNSDTIKQTIESTTGTMKLLISSIAFISLIVGGIGVMNIMLVSVTERTKEIG 551

Query: 299 ILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPV 358
           +    G     I+  F+++     +IG I G  L  ++    N  M             +
Sbjct: 552 VRMAIGARKSNILQQFLIEAILICMIGGISGIMLSLIIGGIFNVFM---------TDFTM 602

Query: 359 AIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
                 ++   L +  I ++    P+  AA   P  AL  E
Sbjct: 603 VFSTFSIVAAVLCSTLIGVIFGYMPAKNAAQLDPITALARE 643



>gi|20095091|ref|NP_614938.1|   Permease subunit of a ABC-type transport system involved in
           lipoprotein release [Methanopyrus kandleri AV19]
 gi|19888379|gb|AAM02868.1|   Permease subunit of a ABC-type transport system involved in
           lipoprotein release [Methanopyrus kandleri AV19]
          Length = 370

 Score =  191 bits (487), Expect = 2e-47
 Identities = 72/399 (18%), Positives = 167/399 (41%), Gaps = 34/399 (8%)

Query: 5   VALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMP 64
           + + + +R +  R         S L+ +G+ +GV A+V + ++  G + +++  I G   
Sbjct: 2   ITIKVAIRNIARR------SVRSLLTILGVAIGVAAVVGISAIAKGLQHDVKVAISGSAS 55

Query: 65  QAILS----SEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA 120
             + S        S+  + + +   K+ GV R   +   + ++   R     ++  ++  
Sbjct: 56  LIVKSKAAPDPLSSVLDESIEDEVRKIPGVKRTVAVWFNNRMITVGRQRQPILIAAVENR 115

Query: 121 QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS 180
             + +    +   +  L      +  G  +  +L    G+ + +               S
Sbjct: 116 GYELVVGSKIEPIEGHLPKH-GEMAFGSLIWRKLRPKVGETVDL---------------S 159

Query: 181 QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL 240
            +   V G F  +S++     +  ++  +++      +I+   +   +P +V    + ++
Sbjct: 160 GQKLRVSGAFKTSSQLANMCAITTLDSVNKI---RGKSISCVFVQTSDPKRVRKEIESRI 216

Query: 241 PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL 300
             G +          +   +R  +     L  +   V A  +  ++ + V+E++ E+ ++
Sbjct: 217 -NGVEAITTSKAVQGMLNNLRTVELAAIALTGIAGVVGALGVANTMLMSVIERKREIGVM 275

Query: 301 QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI 360
           +  G T R +M +F+++     + G I+G  LG L +  L +++  I        + V I
Sbjct: 276 KAIGATNRDVMKLFLLESIILSLAGGIIGCVLGMLGSQLLVHILSYIKHQT----VSVLI 331

Query: 361 EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE 399
            P  + +   +A+AI ++S LYP+W+AA   P EALRYE
Sbjct: 332 TPEVLGLGLALALAIGVVSGLYPAWKAAKVDPVEALRYE 370






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
    Posted date:  Apr 3, 2005  3:19 AM
  Number of letters in database: 819,463,594
  Number of sequences in database:  2,419,489
  
Lambda     K      H
   0.321    0.136    0.391 

Gapped
Lambda     K      H
   0.267   0.0441    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,935,161
Number of Sequences: 2419489
Number of extensions: 16899107
Number of successful extensions: 248129
Number of sequences better than 10.0: 6759
Number of HSP's better than 10.0 without gapping: 2094
Number of HSP's successfully gapped in prelim test: 4665
Number of HSP's that attempted gapping in prelim test: 231382
Number of HSP's gapped (non-prelim): 14384
length of query: 399
length of database: 819,463,594
effective HSP length: 129
effective length of query: 270
effective length of database: 507,349,513
effective search space: 136984368510
effective search space used: 136984368510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.8 bits)